Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430930 | XP_003593260.1 | 84.106 | 302 | 10 | 1 | 1 | 264 | 1 | 302 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430930 | sp|Q94CE3|BCA5_ARATH | 47.059 | 272 | 94 | 6 | 37 | 264 | 36 | 301 | 2.00e-73 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430930 | G7IPN8 | 84.106 | 302 | 10 | 1 | 1 | 264 | 1 | 302 | 0.0 | 513 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053480 | Msa1430930 | 0.825985 | 3.477708e-54 | -8.615850e-47 |
| Msa0093440 | Msa1430930 | 0.803211 | 3.884928e-49 | -8.615850e-47 |
| Msa1430930 | Msa1439160 | 0.816942 | 4.263250e-52 | -8.615850e-47 |
| Msa0617560 | Msa1430930 | -0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0664130 | Msa1430930 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa0708090 | Msa1430930 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa0708230 | Msa1430930 | 0.809086 | 2.250743e-50 | -8.615850e-47 |
| Msa0709820 | Msa1430930 | -0.803627 | 3.185116e-49 | -8.615850e-47 |
| Msa0190010 | Msa1430930 | 0.848104 | 7.578463e-60 | -8.615850e-47 |
| Msa0207900 | Msa1430930 | 0.808797 | 2.596063e-50 | -8.615850e-47 |
| Msa1329990 | Msa1430930 | 0.806264 | 8.952275e-50 | -8.615850e-47 |
| Msa0365360 | Msa1430930 | 0.808785 | 2.611112e-50 | -8.615850e-47 |
| Msa0416800 | Msa1430930 | 0.819618 | 1.056461e-52 | -8.615850e-47 |
| Msa0434890 | Msa1430930 | -0.808882 | 2.488872e-50 | -8.615850e-47 |
| Msa0457370 | Msa1430930 | 0.800617 | 1.325279e-48 | -8.615850e-47 |
| Msa0988500 | Msa1430930 | 0.808534 | 2.954048e-50 | -8.615850e-47 |
| Msa1008340 | Msa1430930 | 0.805215 | 1.486577e-49 | -8.615850e-47 |
| Msa1009020 | Msa1430930 | 0.800611 | 1.328605e-48 | -8.615850e-47 |
| Msa1018720 | Msa1430930 | 0.805737 | 1.155249e-49 | -8.615850e-47 |
| Msa1032350 | Msa1430930 | 0.800409 | 1.461058e-48 | -8.615850e-47 |
| Msa1041770 | Msa1430930 | 0.821496 | 3.915129e-53 | -8.615850e-47 |
| Msa1044450 | Msa1430930 | 0.800122 | 1.671513e-48 | -8.615850e-47 |
| Msa1080220 | Msa1430930 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
| Msa1080280 | Msa1430930 | 0.817866 | 2.640233e-52 | -8.615850e-47 |
| Msa0251140 | Msa1430930 | 0.803766 | 2.980073e-49 | -8.615850e-47 |
| Msa0307760 | Msa1430930 | 0.988874 | 9.218585e-176 | -8.615850e-47 |
| Msa0357100 | Msa1430930 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
| Msa1108780 | Msa1430930 | 0.801401 | 9.163398e-49 | -8.615850e-47 |
| Msa1125050 | Msa1430930 | 0.840200 | 1.003330e-57 | -8.615850e-47 |
| Msa1151970 | Msa1430930 | 0.821420 | 4.075478e-53 | -8.615850e-47 |
| Msa0563140 | Msa1430930 | 0.812220 | 4.729994e-51 | -8.615850e-47 |
| Msa0591780 | Msa1430930 | 0.802682 | 4.996077e-49 | -8.615850e-47 |
| Msa0887000 | Msa1430930 | 0.843729 | 1.171490e-58 | -8.615850e-47 |
| Msa0907900 | Msa1430930 | 0.988570 | 1.531816e-174 | -8.615850e-47 |
| Msa0951720 | Msa1430930 | 0.802711 | 4.928491e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430930 | MtrunA17_Chr2g0279581 | 84.106 | 302 | 10 | 1 | 1 | 264 | 1 | 302 | 0.0 | 513 |
| Msa1430930 | MtrunA17_Chr5g0427341 | 41.639 | 305 | 124 | 8 | 7 | 263 | 10 | 308 | 5.05e-67 | 210 |
| Msa1430930 | MtrunA17_Chr8g0365441 | 32.714 | 269 | 119 | 5 | 18 | 245 | 1 | 248 | 6.88e-41 | 141 |
| Msa1430930 | MtrunA17_Chr5g0413551 | 37.037 | 216 | 92 | 3 | 73 | 244 | 33 | 248 | 9.73e-41 | 141 |
| Msa1430930 | MtrunA17_Chr6g0450641 | 34.413 | 247 | 109 | 4 | 39 | 244 | 89 | 323 | 2.70e-38 | 136 |
| Msa1430930 | MtrunA17_Chr3g0117661 | 38.220 | 191 | 77 | 3 | 91 | 240 | 55 | 245 | 3.09e-35 | 127 |
| Msa1430930 | MtrunA17_Chr3g0117691 | 47.934 | 121 | 61 | 1 | 122 | 240 | 125 | 245 | 2.97e-33 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1430930 | AT4G33580.3 | 47.059 | 272 | 94 | 6 | 37 | 264 | 36 | 301 | 2.04e-74 | 229 |
| Msa1430930 | AT4G33580.1 | 47.059 | 272 | 94 | 6 | 37 | 264 | 36 | 301 | 2.04e-74 | 229 |
| Msa1430930 | AT4G33580.2 | 46.520 | 273 | 95 | 7 | 37 | 264 | 36 | 302 | 1.63e-72 | 224 |
| Msa1430930 | AT1G58180.7 | 41.206 | 199 | 77 | 2 | 84 | 242 | 23 | 221 | 1.33e-50 | 166 |
| Msa1430930 | AT1G58180.3 | 41.206 | 199 | 77 | 2 | 84 | 242 | 23 | 221 | 1.33e-50 | 166 |
| Msa1430930 | AT1G58180.6 | 41.206 | 199 | 77 | 2 | 84 | 242 | 23 | 221 | 1.33e-50 | 166 |
| Msa1430930 | AT1G58180.2 | 41.206 | 199 | 77 | 2 | 84 | 242 | 74 | 272 | 2.60e-50 | 167 |
| Msa1430930 | AT1G58180.4 | 41.206 | 199 | 77 | 2 | 84 | 242 | 74 | 272 | 2.60e-50 | 167 |
| Msa1430930 | AT1G23730.2 | 37.327 | 217 | 94 | 2 | 73 | 247 | 36 | 252 | 6.49e-44 | 149 |
| Msa1430930 | AT1G23730.1 | 37.327 | 217 | 94 | 2 | 73 | 247 | 36 | 252 | 6.49e-44 | 149 |
| Msa1430930 | AT1G70410.3 | 38.140 | 215 | 91 | 3 | 75 | 247 | 38 | 252 | 4.52e-42 | 145 |
| Msa1430930 | AT1G70410.1 | 38.140 | 215 | 91 | 3 | 75 | 247 | 38 | 252 | 4.52e-42 | 145 |
| Msa1430930 | AT1G70410.2 | 38.140 | 215 | 91 | 3 | 75 | 247 | 60 | 274 | 1.14e-41 | 144 |
| Msa1430930 | AT1G58180.1 | 39.326 | 178 | 68 | 2 | 84 | 221 | 74 | 251 | 4.45e-40 | 139 |
| Msa1430930 | AT5G14740.9 | 38.614 | 202 | 83 | 3 | 84 | 244 | 50 | 251 | 1.09e-36 | 131 |
| Msa1430930 | AT5G14740.8 | 38.614 | 202 | 83 | 3 | 84 | 244 | 50 | 251 | 1.09e-36 | 131 |
| Msa1430930 | AT5G14740.7 | 38.614 | 202 | 83 | 3 | 84 | 244 | 50 | 251 | 1.09e-36 | 131 |
| Msa1430930 | AT5G14740.2 | 38.614 | 202 | 83 | 3 | 84 | 244 | 50 | 251 | 1.09e-36 | 131 |
| Msa1430930 | AT5G14740.6 | 38.614 | 202 | 83 | 3 | 84 | 244 | 50 | 251 | 1.09e-36 | 131 |
| Msa1430930 | AT5G14740.1 | 38.614 | 202 | 83 | 3 | 84 | 244 | 122 | 323 | 5.17e-36 | 131 |
| Msa1430930 | AT3G01500.4 | 36.634 | 202 | 87 | 3 | 84 | 244 | 50 | 251 | 1.02e-34 | 125 |
| Msa1430930 | AT3G01500.1 | 36.634 | 202 | 87 | 3 | 84 | 244 | 50 | 251 | 1.80e-34 | 125 |
| Msa1430930 | AT3G01500.3 | 36.634 | 202 | 87 | 3 | 84 | 244 | 127 | 328 | 2.32e-34 | 127 |
| Msa1430930 | AT3G01500.2 | 36.634 | 202 | 87 | 3 | 84 | 244 | 127 | 328 | 3.92e-34 | 126 |
| Msa1430930 | AT5G14740.4 | 38.119 | 202 | 83 | 4 | 84 | 244 | 122 | 322 | 1.51e-33 | 124 |
| Msa1430930 | AT5G14740.3 | 38.119 | 202 | 83 | 4 | 84 | 244 | 122 | 322 | 5.52e-33 | 123 |
| Msa1430930 | AT1G58180.5 | 38.710 | 155 | 55 | 2 | 84 | 198 | 74 | 228 | 5.37e-30 | 114 |
| Msa1430930 | AT5G14740.5 | 33.974 | 156 | 62 | 3 | 84 | 198 | 122 | 277 | 1.53e-15 | 75.5 |
Find 78 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTCAGTGTTCTTCTTTAA+AGG | 0.218106 | tig0026773:+39790 | Msa1430930:CDS |
| TTCTTCTTTAAAGGCTTCTA+TGG | 0.218623 | tig0026773:+39799 | Msa1430930:CDS |
| GCAAGACTTTCAAACTGTTC+AGG | 0.276705 | tig0026773:-40053 | Msa1430930:intergenic |
| GAAATGGACATTGGACTATA+GGG | 0.318375 | tig0026773:+41788 | Msa1430930:CDS |
| ATCAAAAGTTGGGTTATTCA+TGG | 0.325701 | tig0026773:+41397 | Msa1430930:CDS |
| ATTTGCAGTAAACACTCTTC+TGG | 0.333907 | tig0026773:+40774 | Msa1430930:CDS |
| CGTGTAGCTTTATCAAAAGT+TGG | 0.339113 | tig0026773:+41386 | Msa1430930:intron |
| AGAAATGGACATTGGACTAT+AGG | 0.342791 | tig0026773:+41787 | Msa1430930:CDS |
| TTAATTGTTCATTTGAGAAA+TGG | 0.357926 | tig0026773:+41772 | Msa1430930:CDS |
| CTCTGTTCCTGCGCAAATTA+CGG | 0.359512 | tig0026773:+39026 | Msa1430930:CDS |
| GTTGGTAAACAACATGGAAT+AGG | 0.359886 | tig0026773:-38669 | Msa1430930:intergenic |
| AGACCCATTTGACAGCATTA+AGG | 0.363149 | tig0026773:+39061 | Msa1430930:CDS |
| TACCCTTGATGGGTTATAAC+TGG | 0.371016 | tig0026773:-38914 | Msa1430930:intergenic |
| GGACTATAGGGGAACCAAAC+TGG | 0.385882 | tig0026773:+41800 | Msa1430930:CDS |
| GTGTCTAAAATTTATACCTC+TGG | 0.386177 | tig0026773:+41909 | Msa1430930:three_prime_UTR |
| TACACACACGTGAAATGGTT+GGG | 0.395069 | tig0026773:-42009 | Msa1430930:intergenic |
| CAAGACTTTCAAACTGTTCA+GGG | 0.397042 | tig0026773:-40052 | Msa1430930:intergenic |
| AAATCTACACACACGTGAAA+TGG | 0.407565 | tig0026773:-42014 | Msa1430930:intergenic |
| GAATGAATGCATACCCTTGA+TGG | 0.407802 | tig0026773:-38925 | Msa1430930:intergenic |
| CACACCTTAATGCTGTCAAA+TGG | 0.409752 | tig0026773:-39065 | Msa1430930:intergenic |
| TTTGAGTTTGAGTTCTTCAA+TGG | 0.413777 | tig0026773:+38834 | Msa1430930:exon |
| GGAACCAAACTGGAGGAAAA+TGG | 0.421310 | tig0026773:+41810 | Msa1430930:CDS |
| ATCATCTTGCATACCCATAA+GGG | 0.424264 | tig0026773:-41268 | Msa1430930:intergenic |
| CATCATCTTGCATACCCATA+AGG | 0.436099 | tig0026773:-41269 | Msa1430930:intergenic |
| TGATCCAAGGGTAACTAAGT+AGG | 0.442764 | tig0026773:-41695 | Msa1430930:intergenic |
| TAAACCTACTTAGTTACCCT+TGG | 0.445262 | tig0026773:+41691 | Msa1430930:CDS |
| TTATAACTGGAAGAGGATAA+AGG | 0.445717 | tig0026773:-38901 | Msa1430930:intergenic |
| AACGAAGAACTCTCTATTCA+TGG | 0.451547 | tig0026773:+41732 | Msa1430930:CDS |
| TCGTTGGCCACAGCTGCTGT+GGG | 0.452907 | tig0026773:+41235 | Msa1430930:CDS |
| GTCGTTGGCCACAGCTGCTG+TGG | 0.460065 | tig0026773:+41234 | Msa1430930:CDS |
| GTGTAGCTTTATCAAAAGTT+GGG | 0.461410 | tig0026773:+41387 | Msa1430930:intron |
| GTGGATAAAGTTTGTAATGT+TGG | 0.462582 | tig0026773:-38687 | Msa1430930:intergenic |
| GGTGGAAACTTTGTAGCAAA+GGG | 0.463259 | tig0026773:-38880 | Msa1430930:intergenic |
| CACGAATTGGTAAGTCGATC+AGG | 0.466661 | tig0026773:-41887 | Msa1430930:intergenic |
| ACACCTTAATGCTGTCAAAT+GGG | 0.471844 | tig0026773:-39064 | Msa1430930:intergenic |
| AAGGCTTCTATGGGATCTCC+AGG | 0.478157 | tig0026773:+39809 | Msa1430930:CDS |
| TCTTCTTTAAAGGCTTCTAT+GGG | 0.484512 | tig0026773:+39800 | Msa1430930:CDS |
| TTCATTTGAGAAATGGACAT+TGG | 0.487217 | tig0026773:+41779 | Msa1430930:CDS |
| GAAAGAGTTATAAACATAGT+TGG | 0.488329 | tig0026773:-38792 | Msa1430930:intergenic |
| CTTCCAGTTATAACCCATCA+AGG | 0.490907 | tig0026773:+38911 | Msa1430930:CDS |
| TTACCCTTGGATCAAAGAAA+AGG | 0.495682 | tig0026773:+41704 | Msa1430930:CDS |
| TAATGCAGCATTTGTTTCTG+AGG | 0.502192 | tig0026773:-40749 | Msa1430930:intergenic |
| AATGCAGCATTTGTTTCTGA+GGG | 0.509806 | tig0026773:-40748 | Msa1430930:intergenic |
| GTAACTAAGTAGGTTTACTA+AGG | 0.516928 | tig0026773:-41685 | Msa1430930:intergenic |
| AGGTGGAAACTTTGTAGCAA+AGG | 0.522465 | tig0026773:-38881 | Msa1430930:intergenic |
| TGATGGGTTATAACTGGAAG+AGG | 0.525265 | tig0026773:-38908 | Msa1430930:intergenic |
| TAAGTAGGTTTACTAAGGAA+TGG | 0.532715 | tig0026773:-41680 | Msa1430930:intergenic |
| TGTCTAAAATTTATACCTCT+GGG | 0.538011 | tig0026773:+41910 | Msa1430930:three_prime_UTR |
| AAGGGATCAGAGATTGAAGA+AGG | 0.543725 | tig0026773:-38862 | Msa1430930:intergenic |
| TTAAGTTGCTGAGTAAAACC+TGG | 0.546444 | tig0026773:-39827 | Msa1430930:intergenic |
| ACACACACGTGAAATGGTTG+GGG | 0.562708 | tig0026773:-42008 | Msa1430930:intergenic |
| CTACACACACGTGAAATGGT+TGG | 0.563505 | tig0026773:-42010 | Msa1430930:intergenic |
| CTTATGGGTATGCAAGATGA+TGG | 0.564663 | tig0026773:+41270 | Msa1430930:CDS |
| TACCTTTGGAGTTTGAACCT+TGG | 0.567951 | tig0026773:-40075 | Msa1430930:intergenic |
| AATGAATGCATACCCTTGAT+GGG | 0.569966 | tig0026773:-38924 | Msa1430930:intergenic |
| GAGGTGGGAAGCAGAAGCCT+TGG | 0.571080 | tig0026773:-41440 | Msa1430930:intergenic |
| GTTGAGAACATCTTAGTCGT+TGG | 0.572846 | tig0026773:+41219 | Msa1430930:CDS |
| GTTGGCCACAGCTGCTGTGG+GGG | 0.577076 | tig0026773:+41237 | Msa1430930:CDS |
| CCCTTGGATCAAAGAAAAGG+TGG | 0.580841 | tig0026773:+41707 | Msa1430930:CDS |
| ACAGTTTGAAAGTCTTGCCA+AGG | 0.582237 | tig0026773:+40058 | Msa1430930:CDS |
| TGATATATTTAACGATCTGA+AGG | 0.584958 | tig0026773:+39895 | Msa1430930:CDS |
| CCTTCTCGCAATGCGTACAC+TGG | 0.586303 | tig0026773:-41474 | Msa1430930:intergenic |
| TGCAAGATGATGGCAGTACA+AGG | 0.586853 | tig0026773:+41280 | Msa1430930:CDS |
| CGTTGGCCACAGCTGCTGTG+GGG | 0.598268 | tig0026773:+41236 | Msa1430930:CDS |
| CCAGTGTACGCATTGCGAGA+AGG | 0.600622 | tig0026773:+41474 | Msa1430930:CDS |
| TGTAATGTTGGTAAACAACA+TGG | 0.613132 | tig0026773:-38675 | Msa1430930:intergenic |
| ACTTTAGCTGAAGTTAAAGA+CGG | 0.618046 | tig0026773:+39866 | Msa1430930:CDS |
| AAGTATAAAGAGTGTGTGTG+TGG | 0.621516 | tig0026773:-38706 | Msa1430930:intergenic |
| TGCCAAGGTTCAAACTCCAA+AGG | 0.633339 | tig0026773:+40073 | Msa1430930:CDS |
| CTGGCGATCAAAGTCGAGGT+GGG | 0.637149 | tig0026773:-41455 | Msa1430930:intergenic |
| TTCCAGTTATAACCCATCAA+GGG | 0.637369 | tig0026773:+38912 | Msa1430930:CDS |
| AAATGGACATTGGACTATAG+GGG | 0.637668 | tig0026773:+41789 | Msa1430930:CDS |
| ACTGGCGATCAAAGTCGAGG+TGG | 0.654998 | tig0026773:-41456 | Msa1430930:intergenic |
| TAACTGGAAGAGGATAAAGG+TGG | 0.660641 | tig0026773:-38898 | Msa1430930:intergenic |
| TACACTGGCGATCAAAGTCG+AGG | 0.668978 | tig0026773:-41459 | Msa1430930:intergenic |
| AAATGCAAGAGTGAAAACCA+AGG | 0.707710 | tig0026773:+41423 | Msa1430930:CDS |
| CTATAGGGGAACCAAACTGG+AGG | 0.709599 | tig0026773:+41803 | Msa1430930:CDS |
| GAAGAACTCTCTATTCATGG+TGG | 0.732574 | tig0026773:+41735 | Msa1430930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAATCAAAAATTGA+GGG | - | tig0026773:38744-38763 | None:intergenic | 10.0% |
| !!! | TTAAATTGTTTTTATATTAC+AGG | + | tig0026773:41647-41666 | Msa1430930:intron | 10.0% |
| !! | GATTAATTAATCAAAAATTG+AGG | - | tig0026773:38745-38764 | None:intergenic | 15.0% |
| !! | AACAAAAAGAACAAAAATTT+GGG | - | tig0026773:39093-39112 | Msa1430930:intergenic | 15.0% |
| !! | AAACAAAAAGAACAAAAATT+TGG | - | tig0026773:39094-39113 | Msa1430930:intergenic | 15.0% |
| !! | TATCAAACAATTAAATTACA+AGG | - | tig0026773:39492-39511 | Msa1430930:intergenic | 15.0% |
| !! | TTACAATTATAAAAGAATGT+TGG | + | tig0026773:40869-40888 | Msa1430930:intron | 15.0% |
| !!! | CTACAAAAAATAAAGTATTT+TGG | + | tig0026773:41841-41860 | Msa1430930:CDS | 15.0% |
| !!! | TCGAACTTTTTTTTAAAACT+CGG | - | tig0026773:39240-39259 | Msa1430930:intergenic | 20.0% |
| !!! | AAAAATTTGTTTTTCACCAT+TGG | - | tig0026773:39437-39456 | Msa1430930:intergenic | 20.0% |
| !! | AAATTGAAGAATGAACTTAA+AGG | - | tig0026773:40180-40199 | Msa1430930:intergenic | 20.0% |
| !! | ACAGAAATAACTTATATAAG+CGG | - | tig0026773:40434-40453 | Msa1430930:intergenic | 20.0% |
| !!! | CATTCTTTTATAATTGTAAC+AGG | - | tig0026773:40868-40887 | Msa1430930:intergenic | 20.0% |
| !! | ATTTATACCAAAGAAAGAAA+AGG | - | tig0026773:41330-41349 | Msa1430930:intergenic | 20.0% |
| !! | ATTGAATGATATGAACTATT+AGG | + | tig0026773:41553-41572 | Msa1430930:intron | 20.0% |
| !! | TTACATAATCAAGTTCTTAT+GGG | - | tig0026773:41605-41624 | Msa1430930:intergenic | 20.0% |
| !! | TTTACATAATCAAGTTCTTA+TGG | - | tig0026773:41606-41625 | Msa1430930:intergenic | 20.0% |
| !! | TTAATTGTTCATTTGAGAAA+TGG | + | tig0026773:41772-41791 | Msa1430930:CDS | 20.0% |
| ! | GAAAGAGTTATAAACATAGT+TGG | - | tig0026773:38795-38814 | None:intergenic | 25.0% |
| ! | TGCTTTCTTTATGTTAATTG+AGG | + | tig0026773:39129-39148 | Msa1430930:intron | 25.0% |
| ! | TATTAAGTTTGTATCTTCAC+CGG | + | tig0026773:39165-39184 | Msa1430930:intron | 25.0% |
| ! | AAAAAAAAGTTCGAATCTTC+AGG | + | tig0026773:39246-39265 | Msa1430930:intron | 25.0% |
| !! | ACGAAAAACAAATTTTTGCA+TGG | - | tig0026773:39357-39376 | Msa1430930:intergenic | 25.0% |
| !!! | AAAAATTTGTTTTTCGTCAC+TGG | + | tig0026773:39360-39379 | Msa1430930:intron | 25.0% |
| !! | GTGAAAAACAAATTTTTGCA+TGG | + | tig0026773:39440-39459 | Msa1430930:intron | 25.0% |
| ! | TCTTTGTGATCTAAATATGT+TGG | + | tig0026773:39600-39619 | Msa1430930:intron | 25.0% |
| ! | AAAAGAATAGCTGCAAAAAA+TGG | - | tig0026773:39652-39671 | Msa1430930:intergenic | 25.0% |
| ! | TAGAAACATTTAGTTGAATC+AGG | + | tig0026773:39683-39702 | Msa1430930:intron | 25.0% |
| !! | ACATTAGAACTTTGTTTAGA+AGG | - | tig0026773:39761-39780 | Msa1430930:intergenic | 25.0% |
| ! | TGATATATTTAACGATCTGA+AGG | + | tig0026773:39895-39914 | Msa1430930:CDS | 25.0% |
| !! | GAAAATAATGTTTCTAACCA+TGG | - | tig0026773:39971-39990 | Msa1430930:intergenic | 25.0% |
| !! | AATACTTTGAAAACAGCTTA+TGG | + | tig0026773:40528-40547 | Msa1430930:intron | 25.0% |
| ! | TCAAATAAGTTATTCGTAAC+AGG | + | tig0026773:40612-40631 | Msa1430930:intron | 25.0% |
| !! | AGTTGTTATTATCATTGCTA+TGG | + | tig0026773:40664-40683 | Msa1430930:intron | 25.0% |
| ! | TGAAATCAACCAATAAGATA+AGG | + | tig0026773:41049-41068 | Msa1430930:intron | 25.0% |
| !!! | TCTATTAGCTTTCTTAATAG+TGG | + | tig0026773:41139-41158 | Msa1430930:intron | 25.0% |
| !! | AAGATTTTCACTTCTTGTTA+AGG | + | tig0026773:41174-41193 | Msa1430930:intron | 25.0% |
| !! | AGGTACTTAATTCTAGTTAT+CGG | + | tig0026773:41300-41319 | Msa1430930:intron | 25.0% |
| ! | GAAAATAGAAGTAAAAACTC+AGG | - | tig0026773:41868-41887 | Msa1430930:intergenic | 25.0% |
| !! | TAAATTTTAGACACACGAAT+TGG | - | tig0026773:41903-41922 | Msa1430930:intergenic | 25.0% |
| !! | TGTCTAAAATTTATACCTCT+GGG | + | tig0026773:41910-41929 | Msa1430930:three_prime_UTR | 25.0% |
| ! | GAAAGAGAAAAATTTCATCA+TGG | - | tig0026773:42075-42094 | Msa1430930:intergenic | 25.0% |
| ! | TGTAATGTTGGTAAACAACA+TGG | - | tig0026773:38678-38697 | None:intergenic | 30.0% |
| GTGGATAAAGTTTGTAATGT+TGG | - | tig0026773:38690-38709 | None:intergenic | 30.0% | |
| ! | TTTGAGTTTGAGTTCTTCAA+TGG | + | tig0026773:38834-38853 | Msa1430930:exon | 30.0% |
| TTATAACTGGAAGAGGATAA+AGG | - | tig0026773:38904-38923 | Msa1430930:intergenic | 30.0% | |
| AGAAAACAGAGTAAAAACAG+AGG | - | tig0026773:38950-38969 | Msa1430930:intergenic | 30.0% | |
| !!! | GTTAATTGAGGTGTTTTTAG+TGG | + | tig0026773:39141-39160 | Msa1430930:intron | 30.0% |
| GCATACTGATATTGTAATTC+AGG | + | tig0026773:39293-39312 | Msa1430930:intron | 30.0% | |
| TGATAAAATCCAATAGTCTG+TGG | + | tig0026773:39564-39583 | Msa1430930:intron | 30.0% | |
| !!! | TGAAATCTCTCTTTTTTCTG+TGG | + | tig0026773:39729-39748 | Msa1430930:intron | 30.0% |
| ! | AACAAAGTTCTAATGTTTGC+AGG | + | tig0026773:39765-39784 | Msa1430930:intron | 30.0% |
| AAGTCAGTGTTCTTCTTTAA+AGG | + | tig0026773:39790-39809 | Msa1430930:CDS | 30.0% | |
| ! | TTCTTCTTTAAAGGCTTCTA+TGG | + | tig0026773:39799-39818 | Msa1430930:CDS | 30.0% |
| ! | TCTTCTTTAAAGGCTTCTAT+GGG | + | tig0026773:39800-39819 | Msa1430930:CDS | 30.0% |
| ACTTTAGCTGAAGTTAAAGA+CGG | + | tig0026773:39866-39885 | Msa1430930:CDS | 30.0% | |
| TGTAAGCTTCATAAAATCCA+TGG | + | tig0026773:39951-39970 | Msa1430930:intron | 30.0% | |
| !!! | GTTAGTTCTGTTTTATTGTC+AGG | + | tig0026773:40024-40043 | Msa1430930:intron | 30.0% |
| AAAGACAGAACAATTACCTT+TGG | - | tig0026773:40092-40111 | Msa1430930:intergenic | 30.0% | |
| ATAAATCAACAAACAGCTGA+AGG | - | tig0026773:40142-40161 | Msa1430930:intergenic | 30.0% | |
| TGAAATCCCAAAATATTGGA+GGG | - | tig0026773:40292-40311 | Msa1430930:intergenic | 30.0% | |
| TTGAAATCCCAAAATATTGG+AGG | - | tig0026773:40293-40312 | Msa1430930:intergenic | 30.0% | |
| TGGTTGAAATCCCAAAATAT+TGG | - | tig0026773:40296-40315 | Msa1430930:intergenic | 30.0% | |
| !!! | AATATTTTGGGATTTCAACC+AGG | + | tig0026773:40295-40314 | Msa1430930:intron | 30.0% |
| CGAAGTTGTTTATTCAAACA+AGG | - | tig0026773:40377-40396 | Msa1430930:intergenic | 30.0% | |
| ! | ACTGTTTTCATAAGCTATAC+TGG | + | tig0026773:40493-40512 | Msa1430930:intron | 30.0% |
| AGAATTAGAAGAAGCAAGTA+GGG | - | tig0026773:40707-40726 | Msa1430930:intergenic | 30.0% | |
| CTGCAACAATTTCTATAGAA+AGG | + | tig0026773:40919-40938 | Msa1430930:intron | 30.0% | |
| CAACAATTTCTATAGAAAGG+TGG | + | tig0026773:40922-40941 | Msa1430930:intron | 30.0% | |
| ATGTCATGACCTTATCTTAT+TGG | - | tig0026773:41061-41080 | Msa1430930:intergenic | 30.0% | |
| ! | ATAGACATTTTTATTCCTGC+AGG | + | tig0026773:41197-41216 | Msa1430930:intron | 30.0% |
| ! | CAACTTTTGATAAAGCTACA+CGG | - | tig0026773:41388-41407 | Msa1430930:intergenic | 30.0% |
| !! | GTGTAGCTTTATCAAAAGTT+GGG | + | tig0026773:41387-41406 | Msa1430930:intron | 30.0% |
| ATCAAAAGTTGGGTTATTCA+TGG | + | tig0026773:41397-41416 | Msa1430930:CDS | 30.0% | |
| AATGTGTAAATTCACTGTTG+AGG | + | tig0026773:41521-41540 | Msa1430930:intron | 30.0% | |
| TAAGTAGGTTTACTAAGGAA+TGG | - | tig0026773:41683-41702 | Msa1430930:intergenic | 30.0% | |
| GTAACTAAGTAGGTTTACTA+AGG | - | tig0026773:41688-41707 | Msa1430930:intergenic | 30.0% | |
| TTCATTTGAGAAATGGACAT+TGG | + | tig0026773:41779-41798 | Msa1430930:CDS | 30.0% | |
| ! | GTGTCTAAAATTTATACCTC+TGG | + | tig0026773:41909-41928 | Msa1430930:three_prime_UTR | 30.0% |
| ! | GTTGGTAAACAACATGGAAT+AGG | - | tig0026773:38672-38691 | None:intergenic | 35.0% |
| ! | AAGTATAAAGAGTGTGTGTG+TGG | - | tig0026773:38709-38728 | None:intergenic | 35.0% |
| TTCCAGTTATAACCCATCAA+GGG | + | tig0026773:38912-38931 | Msa1430930:CDS | 35.0% | |
| AATGAATGCATACCCTTGAT+GGG | - | tig0026773:38927-38946 | Msa1430930:intergenic | 35.0% | |
| ACACCTTAATGCTGTCAAAT+GGG | - | tig0026773:39067-39086 | Msa1430930:intergenic | 35.0% | |
| ATCATGAAGATTCTCAGGAT+TGG | - | tig0026773:39199-39218 | Msa1430930:intergenic | 35.0% | |
| ATCCTGAGAATCTTCATGAT+TGG | + | tig0026773:39199-39218 | Msa1430930:intron | 35.0% | |
| TGATCTAAATATGTTGGCAC+TGG | + | tig0026773:39606-39625 | Msa1430930:intron | 35.0% | |
| GTTGAATCAGGCTTATTGAA+AGG | + | tig0026773:39695-39714 | Msa1430930:intron | 35.0% | |
| ! | TTAAGTTGCTGAGTAAAACC+TGG | - | tig0026773:39830-39849 | Msa1430930:intergenic | 35.0% |
| CAAGACTTTCAAACTGTTCA+GGG | - | tig0026773:40055-40074 | Msa1430930:intergenic | 35.0% | |
| ! | ACTTTTCCAAGAACAGTTCA+TGG | + | tig0026773:40237-40256 | Msa1430930:intron | 35.0% |
| CAATAACCATGAACTGTTCT+TGG | - | tig0026773:40246-40265 | Msa1430930:intergenic | 35.0% | |
| GAAATCCCAAAATATTGGAG+GGG | - | tig0026773:40291-40310 | Msa1430930:intergenic | 35.0% | |
| AATCCGCAATGTTGCTAATT+TGG | + | tig0026773:40330-40349 | Msa1430930:intron | 35.0% | |
| GAACCAAATTAGCAACATTG+CGG | - | tig0026773:40336-40355 | Msa1430930:intergenic | 35.0% | |
| ! | TAATTTGGTTCCTACCTTTG+AGG | + | tig0026773:40345-40364 | Msa1430930:intron | 35.0% |
| ! | AAACAGAGTGTTTATGTCAG+TGG | + | tig0026773:40583-40602 | Msa1430930:intron | 35.0% |
| GTCAATAGAAGTGAAACTTC+AGG | - | tig0026773:40638-40657 | Msa1430930:intergenic | 35.0% | |
| GAGAATTAGAAGAAGCAAGT+AGG | - | tig0026773:40708-40727 | Msa1430930:intergenic | 35.0% | |
| !! | AATGCAGCATTTGTTTCTGA+GGG | - | tig0026773:40751-40770 | Msa1430930:intergenic | 35.0% |
| !! | TAATGCAGCATTTGTTTCTG+AGG | - | tig0026773:40752-40771 | Msa1430930:intergenic | 35.0% |
| ATTTGCAGTAAACACTCTTC+TGG | + | tig0026773:40774-40793 | Msa1430930:CDS | 35.0% | |
| AATCATGTCTTGCACTATGT+AGG | - | tig0026773:40815-40834 | Msa1430930:intergenic | 35.0% | |
| GAAAGGTGGAATTTAAAGAG+CGG | + | tig0026773:40936-40955 | Msa1430930:intron | 35.0% | |
| TATGGAAAGTTAAGCTTCGA+GGG | + | tig0026773:40961-40980 | Msa1430930:intron | 35.0% | |
| ! | GTTGATTTCACTTGTGACTA+TGG | - | tig0026773:41039-41058 | Msa1430930:intergenic | 35.0% |
| ATCATCTTGCATACCCATAA+GGG | - | tig0026773:41271-41290 | Msa1430930:intergenic | 35.0% | |
| ! | CGGTTTTCCTTTTCTTTCTT+TGG | + | tig0026773:41320-41339 | Msa1430930:intron | 35.0% |
| !! | CGTGTAGCTTTATCAAAAGT+TGG | + | tig0026773:41386-41405 | Msa1430930:intron | 35.0% |
| AAATGCAAGAGTGAAAACCA+AGG | + | tig0026773:41423-41442 | Msa1430930:CDS | 35.0% | |
| TAAACCTACTTAGTTACCCT+TGG | + | tig0026773:41691-41710 | Msa1430930:CDS | 35.0% | |
| TTACCCTTGGATCAAAGAAA+AGG | + | tig0026773:41704-41723 | Msa1430930:CDS | 35.0% | |
| AACGAAGAACTCTCTATTCA+TGG | + | tig0026773:41732-41751 | Msa1430930:CDS | 35.0% | |
| AGAAATGGACATTGGACTAT+AGG | + | tig0026773:41787-41806 | Msa1430930:CDS | 35.0% | |
| GAAATGGACATTGGACTATA+GGG | + | tig0026773:41788-41807 | Msa1430930:CDS | 35.0% | |
| AAATGGACATTGGACTATAG+GGG | + | tig0026773:41789-41808 | Msa1430930:CDS | 35.0% | |
| AAATCTACACACACGTGAAA+TGG | - | tig0026773:42017-42036 | Msa1430930:intergenic | 35.0% | |
| AAGGGATCAGAGATTGAAGA+AGG | - | tig0026773:38865-38884 | Msa1430930:intergenic | 40.0% | |
| GGTGGAAACTTTGTAGCAAA+GGG | - | tig0026773:38883-38902 | Msa1430930:intergenic | 40.0% | |
| AGGTGGAAACTTTGTAGCAA+AGG | - | tig0026773:38884-38903 | Msa1430930:intergenic | 40.0% | |
| TAACTGGAAGAGGATAAAGG+TGG | - | tig0026773:38901-38920 | Msa1430930:intergenic | 40.0% | |
| !! | TGATGGGTTATAACTGGAAG+AGG | - | tig0026773:38911-38930 | Msa1430930:intergenic | 40.0% |
| CTTCCAGTTATAACCCATCA+AGG | + | tig0026773:38911-38930 | Msa1430930:CDS | 40.0% | |
| !! | TACCCTTGATGGGTTATAAC+TGG | - | tig0026773:38917-38936 | Msa1430930:intergenic | 40.0% |
| GAATGAATGCATACCCTTGA+TGG | - | tig0026773:38928-38947 | Msa1430930:intergenic | 40.0% | |
| !! | ATTTTAGCCGTAATTTGCGC+AGG | - | tig0026773:39036-39055 | Msa1430930:intergenic | 40.0% |
| AGACCCATTTGACAGCATTA+AGG | + | tig0026773:39061-39080 | Msa1430930:CDS | 40.0% | |
| CACACCTTAATGCTGTCAAA+TGG | - | tig0026773:39068-39087 | Msa1430930:intergenic | 40.0% | |
| GACCAATCATGAAGATTCTC+AGG | - | tig0026773:39204-39223 | Msa1430930:intergenic | 40.0% | |
| ! | GAATCTTCATGATTGGTCGT+CGG | + | tig0026773:39206-39225 | Msa1430930:intron | 40.0% |
| ! | TGTAATTCAGGCTAGTCCTA+TGG | + | tig0026773:39305-39324 | Msa1430930:intron | 40.0% |
| GCTGAGACTTATTGATCCAA+TGG | + | tig0026773:39418-39437 | Msa1430930:intron | 40.0% | |
| GCAAGACTTTCAAACTGTTC+AGG | - | tig0026773:40056-40075 | Msa1430930:intergenic | 40.0% | |
| ACAGTTTGAAAGTCTTGCCA+AGG | + | tig0026773:40058-40077 | Msa1430930:CDS | 40.0% | |
| !! | TACCTTTGGAGTTTGAACCT+TGG | - | tig0026773:40078-40097 | Msa1430930:intergenic | 40.0% |
| TCTCTCTATTATCCACCTTC+TGG | + | tig0026773:40111-40130 | Msa1430930:intron | 40.0% | |
| ! | GTATGCCCCTCCAATATTTT+GGG | + | tig0026773:40283-40302 | Msa1430930:intron | 40.0% |
| AAACAAGGCCTATACCTCAA+AGG | - | tig0026773:40362-40381 | Msa1430930:intergenic | 40.0% | |
| AAGCTATACTGGAGAGCTTA+TGG | + | tig0026773:40504-40523 | Msa1430930:intron | 40.0% | |
| ! | TCTCTTTTCCTGATACAGAG+TGG | + | tig0026773:40724-40743 | Msa1430930:intron | 40.0% |
| GGAATTTAAAGAGCGGAGTA+TGG | + | tig0026773:40943-40962 | Msa1430930:intron | 40.0% | |
| GTATGGAAAGTTAAGCTTCG+AGG | + | tig0026773:40960-40979 | Msa1430930:intron | 40.0% | |
| GTTGAGAACATCTTAGTCGT+TGG | + | tig0026773:41219-41238 | Msa1430930:CDS | 40.0% | |
| CATCATCTTGCATACCCATA+AGG | - | tig0026773:41272-41291 | Msa1430930:intergenic | 40.0% | |
| CTTATGGGTATGCAAGATGA+TGG | + | tig0026773:41270-41289 | Msa1430930:CDS | 40.0% | |
| TGATCCAAGGGTAACTAAGT+AGG | - | tig0026773:41698-41717 | Msa1430930:intergenic | 40.0% | |
| ! | CCACCTTTTCTTTGATCCAA+GGG | - | tig0026773:41710-41729 | Msa1430930:intergenic | 40.0% |
| ! | TCCACCTTTTCTTTGATCCA+AGG | - | tig0026773:41711-41730 | Msa1430930:intergenic | 40.0% |
| GAAGAACTCTCTATTCATGG+TGG | + | tig0026773:41735-41754 | Msa1430930:CDS | 40.0% | |
| ! | ATCTATGCTTTTAGTCCCAG+AGG | - | tig0026773:41928-41947 | Msa1430930:intergenic | 40.0% |
| TACACACACGTGAAATGGTT+GGG | - | tig0026773:42012-42031 | Msa1430930:intergenic | 40.0% | |
| CTCTGTTCCTGCGCAAATTA+CGG | + | tig0026773:39026-39045 | Msa1430930:CDS | 45.0% | |
| !! | AGATTCTCAGGATTGGTCGT+TGG | - | tig0026773:39192-39211 | Msa1430930:intergenic | 45.0% |
| CTGTCTTACTTGTGCACCAT+AGG | - | tig0026773:39324-39343 | Msa1430930:intergenic | 45.0% | |
| GCCATATCTCACTTGATCCA+AGG | + | tig0026773:39396-39415 | Msa1430930:intron | 45.0% | |
| GCCTTGGATCAAGTGAGATA+TGG | - | tig0026773:39400-39419 | Msa1430930:intergenic | 45.0% | |
| GGATCAATAAGTCTCAGCCT+TGG | - | tig0026773:39416-39435 | Msa1430930:intergenic | 45.0% | |
| AATCCAATAGTCTGTGGCTG+TGG | + | tig0026773:39570-39589 | Msa1430930:intron | 45.0% | |
| AAACCACAGCCACAGACTAT+TGG | - | tig0026773:39576-39595 | Msa1430930:intergenic | 45.0% | |
| TGCCAAGGTTCAAACTCCAA+AGG | + | tig0026773:40073-40092 | Msa1430930:CDS | 45.0% | |
| TTATTGCCTGTGCAGATTCC+AGG | + | tig0026773:40260-40279 | Msa1430930:intron | 45.0% | |
| TATTGCCTGTGCAGATTCCA+GGG | + | tig0026773:40261-40280 | Msa1430930:intron | 45.0% | |
| ! | GGTATGCCCCTCCAATATTT+TGG | + | tig0026773:40282-40301 | Msa1430930:intron | 45.0% |
| !! | GGTTCCTACCTTTGAGGTAT+AGG | + | tig0026773:40351-40370 | Msa1430930:intron | 45.0% |
| AAGGCCTATACCTCAAAGGT+AGG | - | tig0026773:40358-40377 | Msa1430930:intergenic | 45.0% | |
| CTAAGATGTTCTCAACCTGC+AGG | - | tig0026773:41215-41234 | Msa1430930:intergenic | 45.0% | |
| ! | TGCAAGATGATGGCAGTACA+AGG | + | tig0026773:41280-41299 | Msa1430930:CDS | 45.0% |
| CCCTTGGATCAAAGAAAAGG+TGG | + | tig0026773:41707-41726 | Msa1430930:CDS | 45.0% | |
| GGAACCAAACTGGAGGAAAA+TGG | + | tig0026773:41810-41829 | Msa1430930:CDS | 45.0% | |
| !!! | TCTGCCATTTTCCTCCAGTT+TGG | - | tig0026773:41817-41836 | Msa1430930:intergenic | 45.0% |
| CACGAATTGGTAAGTCGATC+AGG | - | tig0026773:41890-41909 | Msa1430930:intergenic | 45.0% | |
| ACACACACGTGAAATGGTTG+GGG | - | tig0026773:42011-42030 | Msa1430930:intergenic | 45.0% | |
| CTACACACACGTGAAATGGT+TGG | - | tig0026773:42013-42032 | Msa1430930:intergenic | 45.0% | |
| ! | TTCATGATTGGTCGTCGGTC+TGG | + | tig0026773:39211-39230 | Msa1430930:intron | 50.0% |
| AAGGCTTCTATGGGATCTCC+AGG | + | tig0026773:39809-39828 | Msa1430930:CDS | 50.0% | |
| ! | AATATTGGAGGGGCATACCC+TGG | - | tig0026773:40281-40300 | Msa1430930:intergenic | 50.0% |
| CGGATTGTGAATGCATCTCC+TGG | - | tig0026773:40316-40335 | Msa1430930:intergenic | 50.0% | |
| TACACTGGCGATCAAAGTCG+AGG | - | tig0026773:41462-41481 | Msa1430930:intergenic | 50.0% | |
| GGACTATAGGGGAACCAAAC+TGG | + | tig0026773:41800-41819 | Msa1430930:CDS | 50.0% | |
| CTATAGGGGAACCAAACTGG+AGG | + | tig0026773:41803-41822 | Msa1430930:CDS | 50.0% | |
| !! | CTCAGGATTGGTCGTTGGTC+CGG | - | tig0026773:39187-39206 | Msa1430930:intergenic | 55.0% |
| CTGAAGGCTTAGCCAGAAGG+TGG | - | tig0026773:40126-40145 | Msa1430930:intergenic | 55.0% | |
| CAGCTGAAGGCTTAGCCAGA+AGG | - | tig0026773:40129-40148 | Msa1430930:intergenic | 55.0% | |
| GCATACCCTGGAATCTGCAC+AGG | - | tig0026773:40269-40288 | Msa1430930:intergenic | 55.0% | |
| CTGAGGGTCCACTCTGTATC+AGG | - | tig0026773:40735-40754 | Msa1430930:intergenic | 55.0% | |
| CTGGCGATCAAAGTCGAGGT+GGG | - | tig0026773:41458-41477 | Msa1430930:intergenic | 55.0% | |
| ACTGGCGATCAAAGTCGAGG+TGG | - | tig0026773:41459-41478 | Msa1430930:intergenic | 55.0% | |
| CCTTCTCGCAATGCGTACAC+TGG | - | tig0026773:41477-41496 | Msa1430930:intergenic | 55.0% | |
| CCAGTGTACGCATTGCGAGA+AGG | + | tig0026773:41474-41493 | Msa1430930:CDS | 55.0% | |
| TCGTTGGCCACAGCTGCTGT+GGG | + | tig0026773:41235-41254 | Msa1430930:CDS | 60.0% | |
| GTATACCCCCACAGCAGCTG+TGG | - | tig0026773:41245-41264 | Msa1430930:intergenic | 60.0% | |
| ! | TGGGGGTATACGCGCCCTTA+TGG | + | tig0026773:41254-41273 | Msa1430930:CDS | 60.0% |
| ! | GGGGGTATACGCGCCCTTAT+GGG | + | tig0026773:41255-41274 | Msa1430930:CDS | 60.0% |
| GAGGTGGGAAGCAGAAGCCT+TGG | - | tig0026773:41443-41462 | Msa1430930:intergenic | 60.0% | |
| GTCGTTGGCCACAGCTGCTG+TGG | + | tig0026773:41234-41253 | Msa1430930:CDS | 65.0% | |
| CGTTGGCCACAGCTGCTGTG+GGG | + | tig0026773:41236-41255 | Msa1430930:CDS | 65.0% | |
| GTTGGCCACAGCTGCTGTGG+GGG | + | tig0026773:41237-41256 | Msa1430930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026773 | gene | 38663 | 42102 | 38663 | ID=Msa1430930;Name=Msa1430930 |
| tig0026773 | mRNA | 38663 | 42102 | 38663 | ID=Msa1430930-mRNA-1;Parent=Msa1430930;Name=Msa1430930-mRNA-1;_AED=0.11;_eAED=0.11;_QI=190|0.85|1|1|1|1|8|233|264 |
| tig0026773 | exon | 38663 | 38933 | 38663 | ID=Msa1430930-mRNA-1:exon:7290;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 39024 | 39082 | 39024 | ID=Msa1430930-mRNA-1:exon:7291;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 39787 | 39951 | 39787 | ID=Msa1430930-mRNA-1:exon:7292;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 40046 | 40094 | 40046 | ID=Msa1430930-mRNA-1:exon:7293;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 40742 | 40795 | 40742 | ID=Msa1430930-mRNA-1:exon:7294;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 41219 | 41301 | 41219 | ID=Msa1430930-mRNA-1:exon:7295;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 41393 | 41495 | 41393 | ID=Msa1430930-mRNA-1:exon:7296;Parent=Msa1430930-mRNA-1 |
| tig0026773 | exon | 41669 | 42102 | 41669 | ID=Msa1430930-mRNA-1:exon:7297;Parent=Msa1430930-mRNA-1 |
| tig0026773 | five_prime_UTR | 38663 | 38852 | 38663 | ID=Msa1430930-mRNA-1:five_prime_utr;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 38853 | 38933 | 38853 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 39024 | 39082 | 39024 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 39787 | 39951 | 39787 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 40046 | 40094 | 40046 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 40742 | 40795 | 40742 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 41219 | 41301 | 41219 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 41393 | 41495 | 41393 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | CDS | 41669 | 41869 | 41669 | ID=Msa1430930-mRNA-1:cds;Parent=Msa1430930-mRNA-1 |
| tig0026773 | three_prime_UTR | 41870 | 42102 | 41870 | ID=Msa1430930-mRNA-1:three_prime_utr;Parent=Msa1430930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
