AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1151970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1151970 MtrunA17_Chr7g0241811 92.816 515 11 2 1 489 1 515 0.0 966
Msa1151970 MtrunA17_Chr4g0005971 71.111 495 110 3 15 486 25 509 0.0 699
Msa1151970 MtrunA17_Chr4g0005961 70.588 34 10 0 430 463 1 34 5.82e-13 63.9
Msa1151970 MtrunA17_Chr4g0047711 25.075 335 207 13 95 396 3 326 1.64e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1151970 AT5G01220.1 75.243 412 79 1 99 487 98 509 0.0 647
Msa1151970 AT5G01220.2 77.469 324 50 1 97 397 96 419 3.66e-180 512

Find 136 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAAGATCCTATTAATT+TGG 0.186753 7_4:-37016876 None:intergenic
AACAATACAATGCTGCTATT+TGG 0.214966 7_4:+37020134 Msa1151970:CDS
ATTACCCTTTCCAACTTCTT+TGG 0.232734 7_4:+37014186 Msa1151970:five_prime_UTR
ATTTCCCTATTGACATTCTA+AGG 0.236704 7_4:+37020456 Msa1151970:three_prime_UTR
AACACTTGGCTTCGTTGTTT+TGG 0.243869 7_4:+37019871 Msa1151970:CDS
ATTTGGCTCCATAAAATTCT+TGG 0.263085 7_4:-37016859 None:intergenic
GCGACCTCTGAAATTATTCT+TGG 0.278894 7_4:-37017688 None:intergenic
ACTAGGGTCATGAAGGATTT+AGG 0.282083 7_4:-37020415 None:intergenic
TGATCCGCGGGAATTATATC+TGG 0.313869 7_4:-37019944 None:intergenic
CTTGGAGTTGAAAAGAGTTT+AGG 0.324101 7_4:+37018878 Msa1151970:CDS
TATCAAATGCCTTCGAGAAA+TGG 0.335772 7_4:+37016591 Msa1151970:CDS
ATGCAGCTTATAATGTAATA+TGG 0.348122 7_4:+37020346 Msa1151970:three_prime_UTR
TTTGGCTCCATAAAATTCTT+GGG 0.352450 7_4:-37016858 None:intergenic
ACAATGCTGCTATTTGGTTC+TGG 0.356155 7_4:+37020140 Msa1151970:CDS
TTTCTACAAGAAATATTAAT+GGG 0.366516 7_4:-37014392 None:intergenic
CAGCTAACAAGATTCGTCTT+TGG 0.369310 7_4:+37018672 Msa1151970:intron
GCTTAGGATTGTTCCTTGCT+TGG 0.378059 7_4:+37020265 Msa1151970:three_prime_UTR
ATGAAAGCAACTCGAGCTTC+AGG 0.388762 7_4:-37019060 None:intergenic
AATCTAAGGGATACAATAGA+AGG 0.389088 7_4:-37014341 None:intergenic
ATTTGATAAAATTCTGAAAC+CGG 0.390392 7_4:-37016576 None:intergenic
GCAGTATTCACAGGAATGTT+AGG 0.393518 7_4:+37019785 Msa1151970:CDS
TCAACTCTTTGTCGAACAAA+AGG 0.396746 7_4:-37020033 None:intergenic
ATCAAATGCCTTCGAGAAAT+GGG 0.399804 7_4:+37016592 Msa1151970:CDS
CAACTCTTTGTCGAACAAAA+GGG 0.406801 7_4:-37020032 None:intergenic
TGCATCATCACCAGGCATAA+TGG 0.407359 7_4:+37017735 Msa1151970:CDS
ACGTTTACTGATCCATTGTA+AGG 0.414214 7_4:-37020191 None:intergenic
TTTGGTTCTGGCGCAAGAAA+AGG 0.416505 7_4:+37020152 Msa1151970:CDS
TAAGTAAACGTTCCAAGCTT+AGG 0.417712 7_4:+37020249 Msa1151970:three_prime_UTR
CACTGGTACATGGGTATGAT+AGG 0.419410 7_4:-37017923 None:intergenic
TGAACTATCAAGGGTTTCTC+AGG 0.420730 7_4:-37018845 None:intergenic
CTGAAAATGAGAGGAATTCA+AGG 0.424097 7_4:+37014573 Msa1151970:CDS
ATAGTTCATGTTGGACGGCT+TGG 0.424140 7_4:+37018860 Msa1151970:CDS
TAATGCCTTAGAATGTCAAT+AGG 0.425149 7_4:-37020461 None:intergenic
AATTCAGCTTTCCCCTCCCT+TGG 0.426635 7_4:+37017632 Msa1151970:intron
AAAAGCTGCACGTAATGAAA+TGG 0.426643 7_4:+37020069 Msa1151970:CDS
ATGAAATGCGATTAAGACTA+AGG 0.429370 7_4:+37018741 Msa1151970:CDS
CTGGTGCCATCTGTTGCCAT+TGG 0.430492 7_4:+37018482 Msa1151970:CDS
TCAGAACGTACCCCTCTCTT+TGG 0.431253 7_4:+37017657 Msa1151970:CDS
GAGAAAGAATCCAAAGAAGT+TGG 0.432970 7_4:-37014196 None:intergenic
CCTGCGCGTGCTGCCACCAC+AGG 0.439815 7_4:-37019914 None:intergenic
GTATGATAGGACATGACAAT+TGG 0.454132 7_4:-37017910 None:intergenic
GAGCCAAATTAATAGGATCT+TGG 0.454953 7_4:+37016873 Msa1151970:CDS
CTGAAACTTACACTGGTACA+TGG 0.458251 7_4:-37017933 None:intergenic
TGGTGCCATCTGTTGCCATT+GGG 0.458535 7_4:+37018483 Msa1151970:CDS
CCGTCCAACATGAACTATCA+AGG 0.479820 7_4:-37018855 None:intergenic
CGAGTTGCTTTCATCGGAGA+TGG 0.480961 7_4:+37019069 Msa1151970:CDS
CAACAGATGGCACCAGAGTC+AGG 0.483672 7_4:-37018475 None:intergenic
CTATAGTTAACTTGTGGTGA+TGG 0.484123 7_4:-37020220 None:intergenic
AAAAGTAGGACTCACGCAAA+TGG 0.484336 7_4:-37014629 None:intergenic
TTGGTTCTGGCGCAAGAAAA+GGG 0.493992 7_4:+37020153 Msa1151970:CDS
AACATTCCTGTGAATACTGC+AGG 0.502201 7_4:-37019782 None:intergenic
AATGCCTTAGAATGTCAATA+GGG 0.504200 7_4:-37020460 None:intergenic
TTCTCATGAAGAAGAAGATA+AGG 0.506129 7_4:+37014508 Msa1151970:CDS
ACCGGCTATCTCTATAATCC+AGG 0.510391 7_4:+37019977 Msa1151970:CDS
TGAAGAAGAAGATAAGGAAG+AGG 0.512706 7_4:+37014514 Msa1151970:CDS
GAGCTAGAGAAAATGTTTGA+AGG 0.513757 7_4:+37019755 Msa1151970:CDS
GCGGATCAAGAAGGTAAAAC+CGG 0.513987 7_4:+37019959 Msa1151970:CDS
GCAAGGAACAATCCTAAGCT+TGG 0.517425 7_4:-37020261 None:intergenic
CCTTCAGAGTCAGAAACACT+TGG 0.519010 7_4:+37019857 Msa1151970:CDS
ATTTCTAACCTTTCGTGTGG+CGG 0.519621 7_4:-37020110 None:intergenic
CCAAATTAATAGGATCTTGG+AGG 0.528912 7_4:+37016876 Msa1151970:CDS
GAAAGGGTAATGTGAGTGAA+TGG 0.529042 7_4:-37014174 None:intergenic
ATGGTTGTGACAACGCATAA+AGG 0.529882 7_4:+37016830 Msa1151970:CDS
CCTGTGGTGGCAGCACGCGC+AGG 0.530726 7_4:+37019914 Msa1151970:CDS
GATGATGCATGTATTATGTC+AGG 0.531330 7_4:-37017721 None:intergenic
CCTTGATAGTTCATGTTGGA+CGG 0.532119 7_4:+37018855 Msa1151970:CDS
CTCTCTCAAGCATATGCTAG+TGG 0.533783 7_4:+37019818 Msa1151970:CDS
CAGAGCAGCTGACCTGACTC+TGG 0.538024 7_4:+37018463 Msa1151970:intron
TAGATACACTAGGGTCATGA+AGG 0.543799 7_4:-37020422 None:intergenic
TGCAGACCAACCATTATGCC+TGG 0.546466 7_4:-37017745 None:intergenic
AAGCAGTCTTCAAGATCACC+TGG 0.548870 7_4:-37019995 None:intergenic
TGCCATCTGTTGCCATTGGG+AGG 0.550215 7_4:+37018486 Msa1151970:CDS
CACAGGTATCCCCGAAGACA+TGG 0.550551 7_4:-37019897 None:intergenic
TATAGTTAACTTGTGGTGAT+GGG 0.550671 7_4:-37020219 None:intergenic
GAATAATTTCAGAGGTCGCT+CGG 0.551809 7_4:+37017692 Msa1151970:CDS
TTCATTTCTAACCTTTCGTG+TGG 0.551901 7_4:-37020113 None:intergenic
AGGGGTACGTTCTGATACCA+AGG 0.553785 7_4:-37017649 None:intergenic
ACCTGGATTATAGAGATAGC+CGG 0.556630 7_4:-37019978 None:intergenic
AGAATCCAAAGAAGTTGGAA+AGG 0.556799 7_4:-37014191 None:intergenic
AACTCTTTGTCGAACAAAAG+GGG 0.558837 7_4:-37020031 None:intergenic
TCATCGGAGATGGACCGTAC+AGG 0.559868 7_4:+37019079 Msa1151970:CDS
GAATCCAAAGAAGTTGGAAA+GGG 0.562269 7_4:-37014190 None:intergenic
GGTATGATGATGAAGTAGAA+AGG 0.562714 7_4:-37014319 None:intergenic
TGAAACTTACACTGGTACAT+GGG 0.562739 7_4:-37017932 None:intergenic
GTGGTGGCAGCACGCGCAGG+AGG 0.563851 7_4:+37019917 Msa1151970:CDS
TTGGCTCCATAAAATTCTTG+GGG 0.568506 7_4:-37016857 None:intergenic
GAAGCTCGAGTTGCTTTCAT+CGG 0.571976 7_4:+37019063 Msa1151970:CDS
TGGACTGAGTGCCAAAGAGA+GGG 0.574015 7_4:-37017668 None:intergenic
CCAAGTGTTTCTGACTCTGA+AGG 0.579198 7_4:-37019857 None:intergenic
AAGATTCGTCTTTGGAACAA+AGG 0.579970 7_4:+37018680 Msa1151970:CDS
TATTATTGAGACCCTTACAA+TGG 0.581845 7_4:+37020179 Msa1151970:CDS
CATGTGAACGGAATCGTGGA+TGG 0.582826 7_4:-37018721 None:intergenic
GGTATGCCTGCAGTATTCAC+AGG 0.583017 7_4:+37019776 Msa1151970:CDS
AAATACAAAATAGATACACT+AGG 0.583397 7_4:-37020432 None:intergenic
GCCATCTGTTGCCATTGGGA+GGG 0.585852 7_4:+37018487 Msa1151970:CDS
TATTTCTTGTAGAAAACCAC+GGG 0.589095 7_4:+37014400 Msa1151970:CDS
GAAGAAGAAGATAAGGAAGA+GGG 0.591527 7_4:+37014515 Msa1151970:CDS
CATCATCTATAGTTAACTTG+TGG 0.591830 7_4:-37020226 None:intergenic
GTATTCACAGGAATGTTAGG+AGG 0.591955 7_4:+37019788 Msa1151970:CDS
TTGGAAGGCCGCCACACGAA+AGG 0.593081 7_4:+37020102 Msa1151970:CDS
AGGACTCACGCAAATGGAGA+AGG 0.598473 7_4:-37014623 None:intergenic
TCCCTCCCAATGGCAACAGA+TGG 0.600891 7_4:-37018488 None:intergenic
TGTGCTTGAAGCTATTAACA+TGG 0.602660 7_4:+37014469 Msa1151970:CDS
ATATTTCTTGTAGAAAACCA+CGG 0.605461 7_4:+37014399 Msa1151970:CDS
CGTCCAACATGAACTATCAA+GGG 0.605699 7_4:-37018854 None:intergenic
TTAATCGCATTTCATGTGAA+CGG 0.605767 7_4:-37018733 None:intergenic
CGTTTACTGATCCATTGTAA+GGG 0.609300 7_4:-37020190 None:intergenic
TACGTTCTGATACCAAGGGA+GGG 0.609682 7_4:-37017644 None:intergenic
ATCTAAGGGATACAATAGAA+GGG 0.609792 7_4:-37014340 None:intergenic
ATTTCATGTGAACGGAATCG+TGG 0.610619 7_4:-37018725 None:intergenic
CAAGCGGCTAGAGTAACAGC+AGG 0.610811 7_4:+37018515 Msa1151970:CDS
CGCTTGAAGATCCCTCCCAA+TGG 0.611728 7_4:-37018498 None:intergenic
TTGGACTGAGTGCCAAAGAG+AGG 0.612058 7_4:-37017669 None:intergenic
TATTCACAGGAATGTTAGGA+GGG 0.613060 7_4:+37019789 Msa1151970:CDS
CGGTTGACTCTGAAAATGAG+AGG 0.615586 7_4:+37014564 Msa1151970:CDS
CCTCATCTCCCATTTCTCGA+AGG 0.616997 7_4:-37016600 None:intergenic
AAACCCTTGATAGTTCATGT+TGG 0.620136 7_4:+37018851 Msa1151970:CDS
AATACAAAATAGATACACTA+GGG 0.621915 7_4:-37020431 None:intergenic
GTCATAATAAGTCACCTGTA+CGG 0.625754 7_4:-37019093 None:intergenic
AAAGAGTTGAGAGAAACCAT+AGG 0.627134 7_4:+37020046 Msa1151970:CDS
CCTTCGAGAAATGGGAGATG+AGG 0.627264 7_4:+37016600 Msa1151970:CDS
ATGTTAAGTCAAGCCAAGCA+AGG 0.630106 7_4:-37020278 None:intergenic
CATGTCTTCGGGGATACCTG+TGG 0.630437 7_4:+37019898 Msa1151970:CDS
ATAATTCCCGCGGATCAAGA+AGG 0.633004 7_4:+37019950 Msa1151970:CDS
CATTGGGAGGGATCTTCAAG+CGG 0.642986 7_4:+37018499 Msa1151970:CDS
ACGTTCTGATACCAAGGGAG+GGG 0.645598 7_4:-37017643 None:intergenic
ATAATACATGCATCATCACC+AGG 0.646793 7_4:+37017727 Msa1151970:CDS
ATTCACAGGAATGTTAGGAG+GGG 0.648550 7_4:+37019790 Msa1151970:CDS
GTCTTCGGGGATACCTGTGG+TGG 0.652844 7_4:+37019901 Msa1151970:CDS
CAGTCCAAGAATAATTTCAG+AGG 0.656322 7_4:+37017684 Msa1151970:CDS
CATTCCAGATATAATTCCCG+CGG 0.668945 7_4:+37019940 Msa1151970:CDS
GGACTGAGTGCCAAAGAGAG+GGG 0.675125 7_4:-37017667 None:intergenic
CCTTGAAAAGAGCACACCCG+TGG 0.676240 7_4:-37014416 None:intergenic
GTACGTTCTGATACCAAGGG+AGG 0.685182 7_4:-37017645 None:intergenic
GGGGTACGTTCTGATACCAA+GGG 0.688280 7_4:-37017648 None:intergenic
ACAAAGAGAGCAATTCGACG+AGG 0.751848 7_4:-37014596 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTGTTTTCTATATA+TGG + chr7_4:37015738-37015757 Msa1151970:intron 10.0%
!! TTTCTACAAGAAATATTAAT+GGG - chr7_4:37014395-37014414 None:intergenic 15.0%
!!! TTTTCTACAAGAAATATTAA+TGG - chr7_4:37014396-37014415 None:intergenic 15.0%
!!! TTCTTTAATTTGAATTGTAT+TGG + chr7_4:37014675-37014694 Msa1151970:intron 15.0%
!!! ATTTTTCTGTTAATAGTTTT+AGG + chr7_4:37015713-37015732 Msa1151970:intron 15.0%
!!! GTTGATTTTCATTTAATTTT+TGG + chr7_4:37016662-37016681 Msa1151970:intron 15.0%
!!! GGATTTTTTTTGAATATTTT+GGG - chr7_4:37016704-37016723 None:intergenic 15.0%
!!! AGGATTTTTTTTGAATATTT+TGG - chr7_4:37016705-37016724 None:intergenic 15.0%
!!! TAATATTAAACTCTGTTTTT+TGG + chr7_4:37016987-37017006 Msa1151970:intron 15.0%
!!! ATTTAATTTAAAATTTCACC+AGG + chr7_4:37017107-37017126 Msa1151970:intron 15.0%
!! AATCATAAAATCATGATAAT+AGG - chr7_4:37017156-37017175 None:intergenic 15.0%
!! ACGTCAAAATTTAATAAATA+AGG - chr7_4:37017783-37017802 None:intergenic 15.0%
!!! AAAAATGAAGGAACAAATTT+TGG - chr7_4:37014257-37014276 None:intergenic 20.0%
!!! TGAAATGTAATTTTAGCAAA+AGG + chr7_4:37014940-37014959 Msa1151970:intron 20.0%
!! TTACATGGTTTAAATATCTT+GGG + chr7_4:37015012-37015031 Msa1151970:intron 20.0%
!! TAAAAAAATTCCTTTAGCAT+GGG - chr7_4:37015156-37015175 None:intergenic 20.0%
!! ATAAAAAAATTCCTTTAGCA+TGG - chr7_4:37015157-37015176 None:intergenic 20.0%
!!! TAATGAGTTGGATATTATTA+TGG + chr7_4:37015517-37015536 Msa1151970:intron 20.0%
!! TCTATATATGGTTTGATATT+TGG + chr7_4:37015750-37015769 Msa1151970:intron 20.0%
!! TATCATATCATATACGTATT+CGG - chr7_4:37015918-37015937 None:intergenic 20.0%
!!! AAATTTCTCATATTTCTATG+CGG - chr7_4:37015942-37015961 None:intergenic 20.0%
!!! ATTTGATAAAATTCTGAAAC+CGG - chr7_4:37016579-37016598 None:intergenic 20.0%
!! TATGTTTATTTGTCTCTTAT+AGG + chr7_4:37016805-37016824 Msa1151970:intron 20.0%
!! AAGATTCTCTATTATCTTAA+TGG + chr7_4:37017311-37017330 Msa1151970:intron 20.0%
!!! AAAAGTATTAGTGCAAAATA+TGG - chr7_4:37017590-37017609 None:intergenic 20.0%
!! GTTTAAATATAAGCATTTCT+CGG + chr7_4:37018592-37018611 Msa1151970:intron 20.0%
!! AATAACGAAAAAATGACAAA+AGG - chr7_4:37018773-37018792 None:intergenic 20.0%
!!! AAGAGTTTAGGTTTTATAAA+AGG + chr7_4:37018890-37018909 Msa1151970:CDS 20.0%
!!! AGAGTTTAGGTTTTATAAAA+GGG + chr7_4:37018891-37018910 Msa1151970:CDS 20.0%
!! CCTATGAAAGATATATTATT+TGG - chr7_4:37018972-37018991 None:intergenic 20.0%
!! CCAAATAATATATCTTTCAT+AGG + chr7_4:37018969-37018988 Msa1151970:intron 20.0%
!! TAAACAATTATATGAGTGTT+TGG + chr7_4:37019319-37019338 Msa1151970:intron 20.0%
!! AAACAATTATATGAGTGTTT+GGG + chr7_4:37019320-37019339 Msa1151970:intron 20.0%
!!! CTTTTAAGCTAATTTCAATA+AGG + chr7_4:37019386-37019405 Msa1151970:intron 20.0%
!! ATTGTTAAATATGAACACTT+TGG + chr7_4:37019691-37019710 Msa1151970:intron 20.0%
!! ATGAAATGGAAAAATTTGAT+TGG + chr7_4:37020083-37020102 Msa1151970:CDS 20.0%
!! AATACAAAATAGATACACTA+GGG - chr7_4:37020434-37020453 None:intergenic 20.0%
!! AAATACAAAATAGATACACT+AGG - chr7_4:37020435-37020454 None:intergenic 20.0%
!!! AAGGAACAAATTTTGGAATT+TGG - chr7_4:37014250-37014269 None:intergenic 25.0%
! ATAAGAATCGTGAAAAATGA+AGG - chr7_4:37014269-37014288 None:intergenic 25.0%
! TGAAAAACGTTGAAATCTAA+GGG - chr7_4:37014357-37014376 None:intergenic 25.0%
! ATATTTCTTGTAGAAAACCA+CGG + chr7_4:37014399-37014418 Msa1151970:CDS 25.0%
!! TTCTTTTTCTTCTTCTACTT+CGG + chr7_4:37014544-37014563 Msa1151970:CDS 25.0%
! AAAAAAAACAGCACAAAAGT+AGG - chr7_4:37014646-37014665 None:intergenic 25.0%
!!! AATGTAATTTTAGCAAAAGG+CGG + chr7_4:37014943-37014962 Msa1151970:intron 25.0%
! TATTTAAACCATGTAACTTG+TGG - chr7_4:37015008-37015027 None:intergenic 25.0%
! GTTACATGGTTTAAATATCT+TGG + chr7_4:37015011-37015030 Msa1151970:intron 25.0%
! AGATCTAAAGATTAATGAGT+TGG + chr7_4:37015505-37015524 Msa1151970:intron 25.0%
!!! AGTTTTGTTGTTTCTTAACA+TGG + chr7_4:37015859-37015878 Msa1151970:intron 25.0%
!! GTTGACAAAAGAATGATTTT+AGG - chr7_4:37016185-37016204 None:intergenic 25.0%
!!! AATTTTAGTTTGACCTCAAT+TGG - chr7_4:37016421-37016440 None:intergenic 25.0%
! AATTGAGGTCAAACTAAAAT+TGG + chr7_4:37016420-37016439 Msa1151970:intron 25.0%
!! CTCAACATAAAATTTGTTCT+TGG + chr7_4:37016515-37016534 Msa1151970:intron 25.0%
!!! TCTACTTTTTTTTTGCATCA+AGG + chr7_4:37016630-37016649 Msa1151970:intron 25.0%
!! TTTTATGGAGCCAAATTAAT+AGG + chr7_4:37016866-37016885 Msa1151970:CDS 25.0%
!! TCTAAAATCACAGATATGAT+TGG + chr7_4:37017444-37017463 Msa1151970:intron 25.0%
! ATTACCACAATCACAAAATT+TGG + chr7_4:37017528-37017547 Msa1151970:intron 25.0%
! TTGTTCGAAAATACATGAAA+AGG - chr7_4:37017558-37017577 None:intergenic 25.0%
!! TGAATTTCCAATTTGCATTT+TGG - chr7_4:37017618-37017637 None:intergenic 25.0%
!! TTTTGACGTTAATAAGCATA+AGG + chr7_4:37017794-37017813 Msa1151970:intron 25.0%
! ATTTACCAGTTTAGATAACA+CGG + chr7_4:37017980-37017999 Msa1151970:intron 25.0%
! AAATTATGTACTGCTTATGT+TGG + chr7_4:37018065-37018084 Msa1151970:intron 25.0%
! GAAAACATGATATTTGATCA+CGG - chr7_4:37018213-37018232 None:intergenic 25.0%
! TGAGATTAAAAATAAGCTGT+TGG - chr7_4:37018284-37018303 None:intergenic 25.0%
!!! TTGCTTACTTTTTTCCTATA+TGG + chr7_4:37018384-37018403 Msa1151970:intron 25.0%
!! TGTGAGCATATCATAAATTT+TGG + chr7_4:37018418-37018437 Msa1151970:intron 25.0%
! ATATAAAACGACTAGATAAG+AGG - chr7_4:37018553-37018572 None:intergenic 25.0%
!! TCGTTTTATATATGCTTAGT+TGG + chr7_4:37018562-37018581 Msa1151970:intron 25.0%
!!! TTTAGGTTTTATAAAAGGGT+AGG + chr7_4:37018895-37018914 Msa1151970:intron 25.0%
!!! TTAGGTTTTATAAAAGGGTA+GGG + chr7_4:37018896-37018915 Msa1151970:intron 25.0%
! GAAAGATATATTATTTGGCA+TGG - chr7_4:37018967-37018986 None:intergenic 25.0%
! TTCCATCTCAAATCATATAA+TGG + chr7_4:37019203-37019222 Msa1151970:intron 25.0%
! TGACTTATGAACAGTTTATT+TGG + chr7_4:37019281-37019300 Msa1151970:intron 25.0%
! GACTTATGAACAGTTTATTT+GGG + chr7_4:37019282-37019301 Msa1151970:intron 25.0%
! GAACACAGATTATACTTTAT+AGG + chr7_4:37019425-37019444 Msa1151970:intron 25.0%
! CAACTTAATTAAGTGGTTAT+CGG - chr7_4:37019533-37019552 None:intergenic 25.0%
! GGATAAACAACTTAATTAAG+TGG - chr7_4:37019540-37019559 None:intergenic 25.0%
! AAAATATTGAGAATGAGATG+TGG - chr7_4:37019631-37019650 None:intergenic 25.0%
! AATGGAAAAATTTGATTGGA+AGG + chr7_4:37020087-37020106 Msa1151970:CDS 25.0%
! ATGCAGCTTATAATGTAATA+TGG + chr7_4:37020346-37020365 Msa1151970:three_prime_UTR 25.0%
ATCTAAGGGATACAATAGAA+GGG - chr7_4:37014343-37014362 None:intergenic 30.0%
AATCTAAGGGATACAATAGA+AGG - chr7_4:37014344-37014363 None:intergenic 30.0%
GTGAAAAACGTTGAAATCTA+AGG - chr7_4:37014358-37014377 None:intergenic 30.0%
!!! TTAATGGGTTTTGCTTGTAA+TGG - chr7_4:37014380-37014399 None:intergenic 30.0%
TATTTCTTGTAGAAAACCAC+GGG + chr7_4:37014400-37014419 Msa1151970:CDS 30.0%
TTCTCATGAAGAAGAAGATA+AGG + chr7_4:37014508-37014527 Msa1151970:CDS 30.0%
GCTAATGCTTTAGTGAATTT+GGG + chr7_4:37014697-37014716 Msa1151970:intron 30.0%
CAATGGTATGAGTTTATACA+GGG + chr7_4:37014857-37014876 Msa1151970:intron 30.0%
ATCATATACCACAAGTTACA+TGG + chr7_4:37014997-37015016 Msa1151970:intron 30.0%
TACTCAATAGTACAAAACGA+AGG + chr7_4:37015039-37015058 Msa1151970:intron 30.0%
TAAATCATCAAATTCGAGCT+GGG + chr7_4:37015079-37015098 Msa1151970:intron 30.0%
!!! GGCACAATTTATTTTTGTGT+TGG - chr7_4:37015236-37015255 None:intergenic 30.0%
ATTCAAATCAGTAGAGATAG+AGG + chr7_4:37015447-37015466 Msa1151970:intron 30.0%
!!! GTTTCGCTTTTAGTTTTTCT+AGG - chr7_4:37015476-37015495 None:intergenic 30.0%
GTTTGGTTGTAGTGTTTAAT+TGG + chr7_4:37015658-37015677 Msa1151970:intron 30.0%
CAAAAGACAGAATTGATGTT+TGG + chr7_4:37016007-37016026 Msa1151970:intron 30.0%
GGAAAGTGAGCATAAATAAT+TGG + chr7_4:37016028-37016047 Msa1151970:intron 30.0%
GATCTTAGAATTATACACCT+TGG + chr7_4:37016067-37016086 Msa1151970:intron 30.0%
TAGTAGATTAGTAAAGACGA+AGG + chr7_4:37016258-37016277 Msa1151970:intron 30.0%
ATGTATCAGGATACAAAAAC+CGG + chr7_4:37016557-37016576 Msa1151970:CDS 30.0%
TATTTGTCTCTTATAGGTGA+TGG + chr7_4:37016811-37016830 Msa1151970:intron 30.0%
! TTTGGCTCCATAAAATTCTT+GGG - chr7_4:37016861-37016880 None:intergenic 30.0%
! ATTTGGCTCCATAAAATTCT+TGG - chr7_4:37016862-37016881 None:intergenic 30.0%
GACATCATTATAGGTCTTTA+TGG - chr7_4:37017245-37017264 None:intergenic 30.0%
AAACACACAGACATCATTAT+AGG - chr7_4:37017254-37017273 None:intergenic 30.0%
TGTGTGTTTGAATGACAAAA+TGG + chr7_4:37017265-37017284 Msa1151970:intron 30.0%
! CGTAAAACTTTTTACACTGA+TGG + chr7_4:37017484-37017503 Msa1151970:intron 30.0%
! CAAACCAAATTTTGTGATTG+TGG - chr7_4:37017535-37017554 None:intergenic 30.0%
TTCGTTTCCAAAATGCAAAT+TGG + chr7_4:37017608-37017627 Msa1151970:intron 30.0%
!!! TCTGATACTACCTTATTTTC+AGG + chr7_4:37017849-37017868 Msa1151970:intron 30.0%
!!! CTACCTTATTTTCAGGTTTT+TGG + chr7_4:37017856-37017875 Msa1151970:intron 30.0%
! TATCTTTTTACCTTTGAACC+AGG + chr7_4:37018250-37018269 Msa1151970:intron 30.0%
TTCCAAGATATACCTTTAGT+TGG + chr7_4:37018319-37018338 Msa1151970:intron 30.0%
ACAAATATTCGAGACCATAT+AGG - chr7_4:37018401-37018420 None:intergenic 30.0%
TTAATCGCATTTCATGTGAA+CGG - chr7_4:37018736-37018755 None:intergenic 30.0%
ATGAAATGCGATTAAGACTA+AGG + chr7_4:37018741-37018760 Msa1151970:CDS 30.0%
TCATCTTATTCTTACAGCAA+CGG + chr7_4:37018818-37018837 Msa1151970:intron 30.0%
!! GTATGACAGCTTTTAACTAA+TGG + chr7_4:37019147-37019166 Msa1151970:intron 30.0%
! TATATGATTTGAGATGGAAG+AGG - chr7_4:37019202-37019221 None:intergenic 30.0%
AGCCATTATATGATTTGAGA+TGG - chr7_4:37019208-37019227 None:intergenic 30.0%
CCTCAAAAGAAAGAGAATAA+GGG - chr7_4:37019570-37019589 None:intergenic 30.0%
TCCTCAAAAGAAAGAGAATA+AGG - chr7_4:37019571-37019590 None:intergenic 30.0%
!! TTCTCTTTCTTTTGAGGATT+TGG + chr7_4:37019573-37019592 Msa1151970:intron 30.0%
CAATTTGCATTATCTAGAGA+GGG - chr7_4:37019675-37019694 None:intergenic 30.0%
ACAATTTGCATTATCTAGAG+AGG - chr7_4:37019676-37019695 None:intergenic 30.0%
AACAATACAATGCTGCTATT+TGG + chr7_4:37020134-37020153 Msa1151970:CDS 30.0%
TATTATTGAGACCCTTACAA+TGG + chr7_4:37020179-37020198 Msa1151970:CDS 30.0%
!! TATAGTTAACTTGTGGTGAT+GGG - chr7_4:37020222-37020241 None:intergenic 30.0%
! CATCATCTATAGTTAACTTG+TGG - chr7_4:37020229-37020248 None:intergenic 30.0%
ATTTCCCTATTGACATTCTA+AGG + chr7_4:37020456-37020475 Msa1151970:three_prime_UTR 30.0%
AATGCCTTAGAATGTCAATA+GGG - chr7_4:37020463-37020482 None:intergenic 30.0%
TAATGCCTTAGAATGTCAAT+AGG - chr7_4:37020464-37020483 None:intergenic 30.0%
ATTACCCTTTCCAACTTCTT+TGG + chr7_4:37014186-37014205 Msa1151970:five_prime_UTR 35.0%
GAATCCAAAGAAGTTGGAAA+GGG - chr7_4:37014193-37014212 None:intergenic 35.0%
AGAATCCAAAGAAGTTGGAA+AGG - chr7_4:37014194-37014213 None:intergenic 35.0%
GAGAAAGAATCCAAAGAAGT+TGG - chr7_4:37014199-37014218 None:intergenic 35.0%
! GGTATGATGATGAAGTAGAA+AGG - chr7_4:37014322-37014341 None:intergenic 35.0%
TGTGCTTGAAGCTATTAACA+TGG + chr7_4:37014469-37014488 Msa1151970:CDS 35.0%
TGAAGAAGAAGATAAGGAAG+AGG + chr7_4:37014514-37014533 Msa1151970:CDS 35.0%
GAAGAAGAAGATAAGGAAGA+GGG + chr7_4:37014515-37014534 Msa1151970:CDS 35.0%
CTGAAAATGAGAGGAATTCA+AGG + chr7_4:37014573-37014592 Msa1151970:CDS 35.0%
GGCTAATGCTTTAGTGAATT+TGG + chr7_4:37014696-37014715 Msa1151970:intron 35.0%
! AACTCCCATTGTGATTGTTT+TGG + chr7_4:37014746-37014765 Msa1151970:intron 35.0%
GAAGCCAAAACAATCACAAT+GGG - chr7_4:37014753-37014772 None:intergenic 35.0%
AGAAGCCAAAACAATCACAA+TGG - chr7_4:37014754-37014773 None:intergenic 35.0%
CCTGTATAAACTCATACCAT+TGG - chr7_4:37014859-37014878 None:intergenic 35.0%
CCAATGGTATGAGTTTATAC+AGG + chr7_4:37014856-37014875 Msa1151970:intron 35.0%
ATGAGTTTATACAGGGAATG+AGG + chr7_4:37014864-37014883 Msa1151970:intron 35.0%
! TCTAGCTTAGAGGTGAAAAT+TGG + chr7_4:37014972-37014991 Msa1151970:intron 35.0%
CAAAACGAAGGAGAAATAGA+AGG + chr7_4:37015051-37015070 Msa1151970:intron 35.0%
GTAAATCATCAAATTCGAGC+TGG + chr7_4:37015078-37015097 Msa1151970:intron 35.0%
GTAAGACTGACATTGTTGTA+CGG + chr7_4:37015186-37015205 Msa1151970:intron 35.0%
TAAGACTGACATTGTTGTAC+GGG + chr7_4:37015187-37015206 Msa1151970:intron 35.0%
ACACCATTAGAGAGAGATAT+AGG + chr7_4:37015319-37015338 Msa1151970:intron 35.0%
CACCATTAGAGAGAGATATA+GGG + chr7_4:37015320-37015339 Msa1151970:intron 35.0%
TTTATCCCACTAAGTGTAGT+CGG - chr7_4:37015583-37015602 None:intergenic 35.0%
! ATTGAACTGTCTTGTTGGTT+TGG + chr7_4:37015641-37015660 Msa1151970:intron 35.0%
! TACTTTCCATGATTAGCTGT+TGG + chr7_4:37015814-37015833 Msa1151970:intron 35.0%
! GATTTTCCAACAGCTAATCA+TGG - chr7_4:37015823-37015842 None:intergenic 35.0%
TTGTGCATACTAACAGCTTT+AGG - chr7_4:37016125-37016144 None:intergenic 35.0%
TGCACAAATTAATCTCCGAA+TGG + chr7_4:37016138-37016157 Msa1151970:intron 35.0%
GCACAAATTAATCTCCGAAT+GGG + chr7_4:37016139-37016158 Msa1151970:intron 35.0%
AGATTAGTAAAGACGAAGGA+TGG + chr7_4:37016262-37016281 Msa1151970:intron 35.0%
!! GTGATAACTTGTTTCATCAC+TGG - chr7_4:37016337-37016356 None:intergenic 35.0%
CCTGATACATATCTGCAAAA+CGG - chr7_4:37016547-37016566 None:intergenic 35.0%
TATCAAATGCCTTCGAGAAA+TGG + chr7_4:37016591-37016610 Msa1151970:CDS 35.0%
ATCAAATGCCTTCGAGAAAT+GGG + chr7_4:37016592-37016611 Msa1151970:CDS 35.0%
AGTGAAGAAGCTATCTATTC+AGG - chr7_4:37016725-37016744 None:intergenic 35.0%
TTGGCTCCATAAAATTCTTG+GGG - chr7_4:37016860-37016879 None:intergenic 35.0%
GAGCCAAATTAATAGGATCT+TGG + chr7_4:37016873-37016892 Msa1151970:CDS 35.0%
CCTCCAAGATCCTATTAATT+TGG - chr7_4:37016879-37016898 None:intergenic 35.0%
CCAAATTAATAGGATCTTGG+AGG + chr7_4:37016876-37016895 Msa1151970:CDS 35.0%
TGCTAGCAGAAGATGTTATA+AGG - chr7_4:37017077-37017096 None:intergenic 35.0%
GTGTTTGAATGACAAAATGG+AGG + chr7_4:37017268-37017287 Msa1151970:intron 35.0%
CAGTCCAAGAATAATTTCAG+AGG + chr7_4:37017684-37017703 Msa1151970:CDS 35.0%
GATGATGCATGTATTATGTC+AGG - chr7_4:37017724-37017743 None:intergenic 35.0%
ATAATACATGCATCATCACC+AGG + chr7_4:37017727-37017746 Msa1151970:CDS 35.0%
GCACCAAAAACCTGAAAATA+AGG - chr7_4:37017862-37017881 None:intergenic 35.0%
GTATGATAGGACATGACAAT+TGG - chr7_4:37017913-37017932 None:intergenic 35.0%
TGAAACTTACACTGGTACAT+GGG - chr7_4:37017935-37017954 None:intergenic 35.0%
AATCTGACTGAAACTTACAC+TGG - chr7_4:37017943-37017962 None:intergenic 35.0%
CAACAATATGATGTCTGATC+TGG + chr7_4:37018029-37018048 Msa1151970:intron 35.0%
!! TATGTTGGAAGTGTTTGACA+TGG + chr7_4:37018080-37018099 Msa1151970:intron 35.0%
TGATATTTGATCACGGAGTT+CGG - chr7_4:37018206-37018225 None:intergenic 35.0%
GGTATATCTTGGAATGTATC+TGG - chr7_4:37018313-37018332 None:intergenic 35.0%
! AGCCAACTAAAGGTATATCT+TGG - chr7_4:37018324-37018343 None:intergenic 35.0%
AAGATATACCTTTAGTTGGC+TGG + chr7_4:37018323-37018342 Msa1151970:intron 35.0%
!! CAATTTTGCTGCATTGACAA+AGG - chr7_4:37018622-37018641 None:intergenic 35.0%
CTTTGTCAATGCAGCAAAAT+TGG + chr7_4:37018620-37018639 Msa1151970:intron 35.0%
!! AAGATTCGTCTTTGGAACAA+AGG + chr7_4:37018680-37018699 Msa1151970:CDS 35.0%
! AAACCCTTGATAGTTCATGT+TGG + chr7_4:37018851-37018870 Msa1151970:CDS 35.0%
CTTGGAGTTGAAAAGAGTTT+AGG + chr7_4:37018878-37018897 Msa1151970:CDS 35.0%
GTCATAATAAGTCACCTGTA+CGG - chr7_4:37019096-37019115 None:intergenic 35.0%
TAAAAGCTGTCATACACAAC+TGG - chr7_4:37019142-37019161 None:intergenic 35.0%
GAAAATCCATTTCATGATGG+CGG - chr7_4:37019233-37019252 None:intergenic 35.0%
CGAGAAAATCCATTTCATGA+TGG - chr7_4:37019236-37019255 None:intergenic 35.0%
! TTTCATGTTTAGAACGCGTT+TGG + chr7_4:37019256-37019275 Msa1151970:intron 35.0%
ATCTGTGTTCATAAGCTCTT+TGG - chr7_4:37019415-37019434 None:intergenic 35.0%
AAAGAGAATAAGGGTAAGCT+TGG - chr7_4:37019561-37019580 None:intergenic 35.0%
! CCCTTATTCTCTTTCTTTTG+AGG + chr7_4:37019567-37019586 Msa1151970:intron 35.0%
!! TCTTTCTTTTGAGGATTTGG+AGG + chr7_4:37019576-37019595 Msa1151970:intron 35.0%
TGATGAGTTCTTTAACTACC+AGG + chr7_4:37019729-37019748 Msa1151970:intron 35.0%
GATGAGTTCTTTAACTACCA+GGG + chr7_4:37019730-37019749 Msa1151970:intron 35.0%
GAGCTAGAGAAAATGTTTGA+AGG + chr7_4:37019755-37019774 Msa1151970:CDS 35.0%
TATTCACAGGAATGTTAGGA+GGG + chr7_4:37019789-37019808 Msa1151970:CDS 35.0%
AACTCTTTGTCGAACAAAAG+GGG - chr7_4:37020034-37020053 None:intergenic 35.0%
CAACTCTTTGTCGAACAAAA+GGG - chr7_4:37020035-37020054 None:intergenic 35.0%
TCAACTCTTTGTCGAACAAA+AGG - chr7_4:37020036-37020055 None:intergenic 35.0%
AAAGAGTTGAGAGAAACCAT+AGG + chr7_4:37020046-37020065 Msa1151970:CDS 35.0%
AAAAGCTGCACGTAATGAAA+TGG + chr7_4:37020069-37020088 Msa1151970:CDS 35.0%
TTCATTTCTAACCTTTCGTG+TGG - chr7_4:37020116-37020135 None:intergenic 35.0%
CGTTTACTGATCCATTGTAA+GGG - chr7_4:37020193-37020212 None:intergenic 35.0%
ACGTTTACTGATCCATTGTA+AGG - chr7_4:37020194-37020213 None:intergenic 35.0%
!! CTATAGTTAACTTGTGGTGA+TGG - chr7_4:37020223-37020242 None:intergenic 35.0%
TAAGTAAACGTTCCAAGCTT+AGG + chr7_4:37020249-37020268 Msa1151970:three_prime_UTR 35.0%
GAAAGGGTAATGTGAGTGAA+TGG - chr7_4:37014177-37014196 None:intergenic 40.0%
AAAAGTAGGACTCACGCAAA+TGG - chr7_4:37014632-37014651 None:intergenic 40.0%
!! TAGTGTTGACTTGATAGCGT+TGG - chr7_4:37014803-37014822 None:intergenic 40.0%
CAAGTCAACACTATAACCAG+TGG + chr7_4:37014810-37014829 Msa1151970:intron 40.0%
TAACCAGTGGTGTAATGTCT+AGG + chr7_4:37014823-37014842 Msa1151970:intron 40.0%
TTTCCTAGACATTACACCAC+TGG - chr7_4:37014829-37014848 None:intergenic 40.0%
! TCTAGGAAAGTGTAGTCCAA+TGG + chr7_4:37014840-37014859 Msa1151970:intron 40.0%
AATTGTGCCTAGTAGAGATG+AGG + chr7_4:37015247-37015266 Msa1151970:intron 40.0%
ACAACATCCTCATCTCTACT+AGG - chr7_4:37015257-37015276 None:intergenic 40.0%
CACCCTATATCTCTCTCTAA+TGG - chr7_4:37015325-37015344 None:intergenic 40.0%
TGCACCTATGGAAGAAAAGA+TGG + chr7_4:37015343-37015362 Msa1151970:intron 40.0%
ACCTATGGAAGAAAAGATGG+TGG + chr7_4:37015346-37015365 Msa1151970:intron 40.0%
! TCCACCATCTTTTCTTCCAT+AGG - chr7_4:37015350-37015369 None:intergenic 40.0%
!! AGATGGTGGAAACTAGACTT+AGG + chr7_4:37015360-37015379 Msa1151970:intron 40.0%
! AAGGAGAGTTGATCAGATGA+AGG + chr7_4:37015422-37015441 Msa1151970:intron 40.0%
ACACTTAGTGGGATAAAGCT+TGG + chr7_4:37015586-37015605 Msa1151970:intron 40.0%
CAGCAATTGAACTGTCTTGT+TGG + chr7_4:37015636-37015655 Msa1151970:intron 40.0%
TTTGTTTGCTTAGCAGTGTG+TGG + chr7_4:37015785-37015804 Msa1151970:intron 40.0%
! TACACCTTGGTCTTTGAAAG+TGG + chr7_4:37016080-37016099 Msa1151970:intron 40.0%
GAATGTGAAGTTGACCCATT+CGG - chr7_4:37016156-37016175 None:intergenic 40.0%
TCTGCATTGCATTCCAATTG+AGG + chr7_4:37016405-37016424 Msa1151970:intron 40.0%
! CCGTTTTGCAGATATGTATC+AGG + chr7_4:37016544-37016563 Msa1151970:intron 40.0%
ATGGTTGTGACAACGCATAA+AGG + chr7_4:37016830-37016849 Msa1151970:CDS 40.0%
! GGAGTTCCCCAAGAATTTTA+TGG + chr7_4:37016851-37016870 Msa1151970:CDS 40.0%
!! CAGGAAGTACTAAGTACTTG+CGG + chr7_4:37017126-37017145 Msa1151970:intron 40.0%
!! GCGACCTCTGAAATTATTCT+TGG - chr7_4:37017691-37017710 None:intergenic 40.0%
GAATAATTTCAGAGGTCGCT+CGG + chr7_4:37017692-37017711 Msa1151970:CDS 40.0%
CTGAAACTTACACTGGTACA+TGG - chr7_4:37017936-37017955 None:intergenic 40.0%
AAGAGCCGTGTTATCTAAAC+TGG - chr7_4:37017988-37018007 None:intergenic 40.0%
GTACTTATGACCAACCACAT+CGG - chr7_4:37018354-37018373 None:intergenic 40.0%
TGTCAATGCAGCAAAATTGG+TGG + chr7_4:37018623-37018642 Msa1151970:intron 40.0%
CAAAGACGAATCTTGTTAGC+TGG - chr7_4:37018674-37018693 None:intergenic 40.0%
CAGCTAACAAGATTCGTCTT+TGG + chr7_4:37018672-37018691 Msa1151970:intron 40.0%
ATTTCATGTGAACGGAATCG+TGG - chr7_4:37018728-37018747 None:intergenic 40.0%
TGAACTATCAAGGGTTTCTC+AGG - chr7_4:37018848-37018867 None:intergenic 40.0%
CGTCCAACATGAACTATCAA+GGG - chr7_4:37018857-37018876 None:intergenic 40.0%
! CCTTGATAGTTCATGTTGGA+CGG + chr7_4:37018855-37018874 Msa1151970:CDS 40.0%
TGTTTGACACCTGAACCAAA+TGG + chr7_4:37019013-37019032 Msa1151970:intron 40.0%
!! CTGAACCAAATGGTTTTGCA+GGG + chr7_4:37019023-37019042 Msa1151970:intron 40.0%
AACATTCCTGTGAATACTGC+AGG - chr7_4:37019785-37019804 None:intergenic 40.0%
GCAGTATTCACAGGAATGTT+AGG + chr7_4:37019785-37019804 Msa1151970:CDS 40.0%
GTATTCACAGGAATGTTAGG+AGG + chr7_4:37019788-37019807 Msa1151970:CDS 40.0%
ATTCACAGGAATGTTAGGAG+GGG + chr7_4:37019790-37019809 Msa1151970:CDS 40.0%
! AACACTTGGCTTCGTTGTTT+TGG + chr7_4:37019871-37019890 Msa1151970:CDS 40.0%
CATTCCAGATATAATTCCCG+CGG + chr7_4:37019940-37019959 Msa1151970:CDS 40.0%
ACCTGGATTATAGAGATAGC+CGG - chr7_4:37019981-37020000 None:intergenic 40.0%
! ATTACGTGCAGCTTTTCCTA+TGG - chr7_4:37020065-37020084 None:intergenic 40.0%
ATTTCTAACCTTTCGTGTGG+CGG - chr7_4:37020113-37020132 None:intergenic 40.0%
! ACAATGCTGCTATTTGGTTC+TGG + chr7_4:37020140-37020159 Msa1151970:CDS 40.0%
ATGTTAAGTCAAGCCAAGCA+AGG - chr7_4:37020281-37020300 None:intergenic 40.0%
ACTAGGGTCATGAAGGATTT+AGG - chr7_4:37020418-37020437 None:intergenic 40.0%
TAGATACACTAGGGTCATGA+AGG - chr7_4:37020425-37020444 None:intergenic 40.0%
! CGGTTGACTCTGAAAATGAG+AGG + chr7_4:37014564-37014583 Msa1151970:CDS 45.0%
ACAAAGAGAGCAATTCGACG+AGG - chr7_4:37014599-37014618 None:intergenic 45.0%
ATCATCAAATTCGAGCTGGG+TGG + chr7_4:37015082-37015101 Msa1151970:intron 45.0%
CGCATCAAATGGAACACCTA+AGG - chr7_4:37015124-37015143 None:intergenic 45.0%
GGCAGTACTTTCGCATCAAA+TGG - chr7_4:37015135-37015154 None:intergenic 45.0%
!! GAAAGTACTGCCCATGCTAA+AGG + chr7_4:37015143-37015162 Msa1151970:intron 45.0%
TAGAGATGAGGATGTTGTGC+TGG + chr7_4:37015259-37015278 Msa1151970:intron 45.0%
AGAGATGAGGATGTTGTGCT+GGG + chr7_4:37015260-37015279 Msa1151970:intron 45.0%
AGAGATATAGGGTGCACCTA+TGG + chr7_4:37015331-37015350 Msa1151970:intron 45.0%
TGGTGGAAACTAGACTTAGG+TGG + chr7_4:37015363-37015382 Msa1151970:intron 45.0%
! AAGACCCATGGACTGTAGTA+AGG + chr7_4:37015403-37015422 Msa1151970:intron 45.0%
CTCTCCTTACTACAGTCCAT+GGG - chr7_4:37015410-37015429 None:intergenic 45.0%
ACTCTCCTTACTACAGTCCA+TGG - chr7_4:37015411-37015430 None:intergenic 45.0%
ACTAAGTGTAGTCGGCTACA+TGG - chr7_4:37015575-37015594 None:intergenic 45.0%
ATGTAGCCGACTACACTTAG+TGG + chr7_4:37015574-37015593 Msa1151970:intron 45.0%
TGTAGCCGACTACACTTAGT+GGG + chr7_4:37015575-37015594 Msa1151970:intron 45.0%
! TGTTGCTGCTGCTGTAGTTT+TGG + chr7_4:37015613-37015632 Msa1151970:intron 45.0%
!! GTTGCCACTTTCAAAGACCA+AGG - chr7_4:37016087-37016106 None:intergenic 45.0%
AGTGGCAACATGAGTTGCTT+TGG + chr7_4:37016098-37016117 Msa1151970:intron 45.0%
! AGACGAAGGATGGATTTGTG+AGG + chr7_4:37016272-37016291 Msa1151970:intron 45.0%
! GAAGGATGGATTTGTGAGGT+CGG + chr7_4:37016276-37016295 Msa1151970:intron 45.0%
CGCAAGTACTTAGTACTTCC+TGG - chr7_4:37017128-37017147 None:intergenic 45.0%
TACGTTCTGATACCAAGGGA+GGG - chr7_4:37017647-37017666 None:intergenic 45.0%
TGCATCATCACCAGGCATAA+TGG + chr7_4:37017735-37017754 Msa1151970:CDS 45.0%
TCATCACCAGGCATAATGGT+TGG + chr7_4:37017739-37017758 Msa1151970:intron 45.0%
CACTGGTACATGGGTATGAT+AGG - chr7_4:37017926-37017945 None:intergenic 45.0%
CCGTCCAACATGAACTATCA+AGG - chr7_4:37018858-37018877 None:intergenic 45.0%
ATAGTTCATGTTGGACGGCT+TGG + chr7_4:37018860-37018879 Msa1151970:CDS 45.0%
! CCTGCAAAACCATTTGGTTC+AGG - chr7_4:37019025-37019044 None:intergenic 45.0%
!! CCTGAACCAAATGGTTTTGC+AGG + chr7_4:37019022-37019041 Msa1151970:intron 45.0%
CATGACCCTGCAAAACCATT+TGG - chr7_4:37019031-37019050 None:intergenic 45.0%
!! CAAATGGTTTTGCAGGGTCA+TGG + chr7_4:37019029-37019048 Msa1151970:intron 45.0%
ATGAAAGCAACTCGAGCTTC+AGG - chr7_4:37019063-37019082 None:intergenic 45.0%
! GAAGCTCGAGTTGCTTTCAT+CGG + chr7_4:37019063-37019082 Msa1151970:CDS 45.0%
GAGTTCTTTAACTACCAGGG+AGG + chr7_4:37019733-37019752 Msa1151970:intron 45.0%
CTCTCTCAAGCATATGCTAG+TGG + chr7_4:37019818-37019837 Msa1151970:CDS 45.0%
! CCAAGTGTTTCTGACTCTGA+AGG - chr7_4:37019860-37019879 None:intergenic 45.0%
CCTTCAGAGTCAGAAACACT+TGG + chr7_4:37019857-37019876 Msa1151970:CDS 45.0%
!!! ACTTGGCTTCGTTGTTTTGG+AGG + chr7_4:37019874-37019893 Msa1151970:CDS 45.0%
!!! TGTTTTGGAGGCCATGTCTT+CGG + chr7_4:37019886-37019905 Msa1151970:CDS 45.0%
TGATCCGCGGGAATTATATC+TGG - chr7_4:37019947-37019966 None:intergenic 45.0%
ATAATTCCCGCGGATCAAGA+AGG + chr7_4:37019950-37019969 Msa1151970:CDS 45.0%
! GTTTTACCTTCTTGATCCGC+GGG - chr7_4:37019959-37019978 None:intergenic 45.0%
! GGTTTTACCTTCTTGATCCG+CGG - chr7_4:37019960-37019979 None:intergenic 45.0%
GCGGATCAAGAAGGTAAAAC+CGG + chr7_4:37019959-37019978 Msa1151970:CDS 45.0%
ACCGGCTATCTCTATAATCC+AGG + chr7_4:37019977-37019996 Msa1151970:CDS 45.0%
AAGCAGTCTTCAAGATCACC+TGG - chr7_4:37019998-37020017 None:intergenic 45.0%
!! TTTGGTTCTGGCGCAAGAAA+AGG + chr7_4:37020152-37020171 Msa1151970:CDS 45.0%
!! TTGGTTCTGGCGCAAGAAAA+GGG + chr7_4:37020153-37020172 Msa1151970:CDS 45.0%
GCAAGGAACAATCCTAAGCT+TGG - chr7_4:37020264-37020283 None:intergenic 45.0%
GCTTAGGATTGTTCCTTGCT+TGG + chr7_4:37020265-37020284 Msa1151970:three_prime_UTR 45.0%
! CACGGGTGTGCTCTTTTCAA+GGG + chr7_4:37014417-37014436 Msa1151970:CDS 50.0%
AGGACTCACGCAAATGGAGA+AGG - chr7_4:37014626-37014645 None:intergenic 50.0%
!!! GCGGAGCTTTTCTAGCTTAG+AGG + chr7_4:37014962-37014981 Msa1151970:intron 50.0%
TTCGAGCTGGGTGGTTGAAA+TGG + chr7_4:37015091-37015110 Msa1151970:intron 50.0%
TGGGTGGTTGAAATGGAGGA+GGG + chr7_4:37015098-37015117 Msa1151970:intron 50.0%
TTGAAATGGAGGAGGGCCTT+AGG + chr7_4:37015105-37015124 Msa1151970:intron 50.0%
TGTTGTACGGGACTGAGTGT+TGG + chr7_4:37015199-37015218 Msa1151970:intron 50.0%
GTTGTACGGGACTGAGTGTT+GGG + chr7_4:37015200-37015219 Msa1151970:intron 50.0%
AGGATGTTGTGCTGGGTGTT+TGG + chr7_4:37015267-37015286 Msa1151970:intron 50.0%
GCATGTAGAGAGAAGACCCA+TGG + chr7_4:37015391-37015410 Msa1151970:intron 50.0%
CCTCATCTCCCATTTCTCGA+AGG - chr7_4:37016603-37016622 None:intergenic 50.0%
CCTTCGAGAAATGGGAGATG+AGG + chr7_4:37016600-37016619 Msa1151970:CDS 50.0%
AATTCAGCTTTCCCCTCCCT+TGG + chr7_4:37017632-37017651 Msa1151970:intron 50.0%
ACGTTCTGATACCAAGGGAG+GGG - chr7_4:37017646-37017665 None:intergenic 50.0%
GTACGTTCTGATACCAAGGG+AGG - chr7_4:37017648-37017667 None:intergenic 50.0%
GGGGTACGTTCTGATACCAA+GGG - chr7_4:37017651-37017670 None:intergenic 50.0%
! AGGGGTACGTTCTGATACCA+AGG - chr7_4:37017652-37017671 None:intergenic 50.0%
TCAGAACGTACCCCTCTCTT+TGG + chr7_4:37017657-37017676 Msa1151970:CDS 50.0%
TGGACTGAGTGCCAAAGAGA+GGG - chr7_4:37017671-37017690 None:intergenic 50.0%
TTGGACTGAGTGCCAAAGAG+AGG - chr7_4:37017672-37017691 None:intergenic 50.0%
TGCAGACCAACCATTATGCC+TGG - chr7_4:37017748-37017767 None:intergenic 50.0%
TGATGCAGCTTCTCTGCAGT+CGG + chr7_4:37018162-37018181 Msa1151970:intron 50.0%
GTCGGAGACATAGACACACT+TGG + chr7_4:37018180-37018199 Msa1151970:intron 50.0%
GGAACAGCAACCTGGTTCAA+AGG - chr7_4:37018263-37018282 None:intergenic 50.0%
AAGCTGTTGGAACAGCAACC+TGG - chr7_4:37018271-37018290 None:intergenic 50.0%
CGGTTTCACCAGCCAACTAA+AGG - chr7_4:37018334-37018353 None:intergenic 50.0%
!! TGGTGCCATCTGTTGCCATT+GGG + chr7_4:37018483-37018502 Msa1151970:CDS 50.0%
CATTGGGAGGGATCTTCAAG+CGG + chr7_4:37018499-37018518 Msa1151970:CDS 50.0%
CATGTGAACGGAATCGTGGA+TGG - chr7_4:37018724-37018743 None:intergenic 50.0%
! CGAGTTGCTTTCATCGGAGA+TGG + chr7_4:37019069-37019088 Msa1151970:CDS 50.0%
GGCTAACCGCCATCATGAAA+TGG + chr7_4:37019224-37019243 Msa1151970:intron 50.0%
GGACTGAAATCGCTAGACAG+AGG - chr7_4:37019610-37019629 None:intergenic 50.0%
!! CATTTTCTCTAGCTCCTCCC+TGG - chr7_4:37019750-37019769 None:intergenic 50.0%
GGTATGCCTGCAGTATTCAC+AGG + chr7_4:37019776-37019795 Msa1151970:CDS 50.0%
!!! GTTTTGGAGGCCATGTCTTC+GGG + chr7_4:37019887-37019906 Msa1151970:CDS 50.0%
!! TTTTGGAGGCCATGTCTTCG+GGG + chr7_4:37019888-37019907 Msa1151970:CDS 50.0%
! CCTTGAAAAGAGCACACCCG+TGG - chr7_4:37014419-37014438 None:intergenic 55.0%
! CCACGGGTGTGCTCTTTTCA+AGG + chr7_4:37014416-37014435 Msa1151970:CDS 55.0%
GAGCTGGGTGGTTGAAATGG+AGG + chr7_4:37015094-37015113 Msa1151970:intron 55.0%
CTGGGTGGTTGAAATGGAGG+AGG + chr7_4:37015097-37015116 Msa1151970:intron 55.0%
GGACTGAGTGCCAAAGAGAG+GGG - chr7_4:37017670-37017689 None:intergenic 55.0%
GTTGGCTGGTGAAACCGATG+TGG + chr7_4:37018337-37018356 Msa1151970:intron 55.0%
GCTGGTGAAACCGATGTGGT+TGG + chr7_4:37018341-37018360 Msa1151970:intron 55.0%
CAACAGATGGCACCAGAGTC+AGG - chr7_4:37018478-37018497 None:intergenic 55.0%
!! CTGGTGCCATCTGTTGCCAT+TGG + chr7_4:37018482-37018501 Msa1151970:CDS 55.0%
TGCCATCTGTTGCCATTGGG+AGG + chr7_4:37018486-37018505 Msa1151970:CDS 55.0%
GCCATCTGTTGCCATTGGGA+GGG + chr7_4:37018487-37018506 Msa1151970:CDS 55.0%
TCCCTCCCAATGGCAACAGA+TGG - chr7_4:37018491-37018510 None:intergenic 55.0%
CGCTTGAAGATCCCTCCCAA+TGG - chr7_4:37018501-37018520 None:intergenic 55.0%
CAAGCGGCTAGAGTAACAGC+AGG + chr7_4:37018515-37018534 Msa1151970:CDS 55.0%
TCATCGGAGATGGACCGTAC+AGG + chr7_4:37019079-37019098 Msa1151970:CDS 55.0%
CACAGGTATCCCCGAAGACA+TGG - chr7_4:37019900-37019919 None:intergenic 55.0%
CATGTCTTCGGGGATACCTG+TGG + chr7_4:37019898-37019917 Msa1151970:CDS 55.0%
CAGAGCAGCTGACCTGACTC+TGG + chr7_4:37018463-37018482 Msa1151970:intron 60.0%
GTCTTCGGGGATACCTGTGG+TGG + chr7_4:37019901-37019920 Msa1151970:CDS 60.0%
TTGGAAGGCCGCCACACGAA+AGG + chr7_4:37020102-37020121 Msa1151970:CDS 60.0%
CCTGCGCGTGCTGCCACCAC+AGG - chr7_4:37019917-37019936 None:intergenic 75.0%
CCTGTGGTGGCAGCACGCGC+AGG + chr7_4:37019914-37019933 Msa1151970:CDS 75.0%
GTGGTGGCAGCACGCGCAGG+AGG + chr7_4:37019917-37019936 Msa1151970:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 37014146 37020510 37014146 ID=Msa1151970;Name=Msa1151970
chr7_4 mRNA 37014146 37020510 37014146 ID=Msa1151970-mRNA-1;Parent=Msa1151970;Name=Msa1151970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=141|0.88|0.9|1|0.77|0.8|10|264|489
chr7_4 exon 37014146 37014636 37014146 ID=Msa1151970-mRNA-1:exon:8717;Parent=Msa1151970-mRNA-1
chr7_4 exon 37016555 37016621 37016555 ID=Msa1151970-mRNA-1:exon:8718;Parent=Msa1151970-mRNA-1
chr7_4 exon 37016827 37016897 37016827 ID=Msa1151970-mRNA-1:exon:8719;Parent=Msa1151970-mRNA-1
chr7_4 exon 37017639 37017756 37017639 ID=Msa1151970-mRNA-1:exon:8720;Parent=Msa1151970-mRNA-1
chr7_4 exon 37017871 37017944 37017871 ID=Msa1151970-mRNA-1:exon:8721;Parent=Msa1151970-mRNA-1
chr7_4 exon 37018466 37018536 37018466 ID=Msa1151970-mRNA-1:exon:8722;Parent=Msa1151970-mRNA-1
chr7_4 exon 37018675 37018762 37018675 ID=Msa1151970-mRNA-1:exon:8723;Parent=Msa1151970-mRNA-1
chr7_4 exon 37018835 37018912 37018835 ID=Msa1151970-mRNA-1:exon:8724;Parent=Msa1151970-mRNA-1
chr7_4 exon 37019044 37019100 37019044 ID=Msa1151970-mRNA-1:exon:8725;Parent=Msa1151970-mRNA-1
chr7_4 exon 37019751 37020510 37019751 ID=Msa1151970-mRNA-1:exon:8726;Parent=Msa1151970-mRNA-1
chr7_4 five_prime_UTR 37014146 37014286 37014146 ID=Msa1151970-mRNA-1:five_prime_utr;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37014287 37014636 37014287 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37016555 37016621 37016555 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37016827 37016897 37016827 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37017639 37017756 37017639 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37017871 37017944 37017871 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37018466 37018536 37018466 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37018675 37018762 37018675 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37018835 37018912 37018835 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37019044 37019100 37019044 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 CDS 37019751 37020246 37019751 ID=Msa1151970-mRNA-1:cds;Parent=Msa1151970-mRNA-1
chr7_4 three_prime_UTR 37020247 37020510 37020247 ID=Msa1151970-mRNA-1:three_prime_utr;Parent=Msa1151970-mRNA-1
Gene Sequence

>Msa1151970

ATGAATATGAATGCTACTTCACTCTCTATAAACCTTTCTACTTCATCATCATACCCTTCTATTGTATCCCTTAGATTTCAACGTTTTTCACCATTACAAGCAAAACCCATTAATATTTCTTGTAGAAAACCACGGGTGTGCTCTTTTCAAGGGTTAAAAACTGTGAATTGTAGAAAAAGTTTTGTGCTTGAAGCTATTAACATGGATAAAGCAGAAGTTGATTCTCATGAAGAAGAAGATAAGGAAGAGGGTACTTCTTCTTTTTCTTCTTCTACTTCGGTTGACTCTGAAAATGAGAGGAATTCAAGGCCTCGTCGAATTGCTCTCTTTGTTGAACCTTCTCCATTTGCATATGTATCAGGATACAAAAACCGGTTTCAGAATTTTATCAAATGCCTTCGAGAAATGGGAGATGAGGTGATGGTTGTGACAACGCATAAAGGAGTTCCCCAAGAATTTTATGGAGCCAAATTAATAGGATCTTGGAGCTTTCCCCTCCCTTGGTATCAGAACGTACCCCTCTCTTTGGCACTCAGTCCAAGAATAATTTCAGAGGTCGCTCGGTTCAAGCCTGACATAATACATGCATCATCACCAGGCATAATGGTTTTTGGTGCTCTTATCATTGCAAAACTATTGTCTGTTCCAATTGTCATGTCCTATCATACCCATGTACCAGTAGCAGCTGACCTGACTCTGGTGCCATCTGTTGCCATTGGGAGGGATCTTCAAGCGGCTAGAGTAACAGCAGCTAACAAGATTCGTCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTCCATCCACGATTCCGTTCACATGAAATGCGATTAAGACTAAGCAACGGTGAACCTGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTTGAAAAGAGTTTAGGTTTTATAAAAGGGGTCATGGATAAGCTTCCTGAAGCTCGAGTTGCTTTCATCGGAGATGGACCGTACAGGGAGGAGCTAGAGAAAATGTTTGAAGGTATGCCTGCAGTATTCACAGGAATGTTAGGAGGGGAAGTACTCTCTCAAGCATATGCTAGTGGAGATGTATTTATCATGCCTTCAGAGTCAGAAACACTTGGCTTCGTTGTTTTGGAGGCCATGTCTTCGGGGATACCTGTGGTGGCAGCACGCGCAGGAGGCATTCCAGATATAATTCCCGCGGATCAAGAAGGTAAAACCGGCTATCTCTATAATCCAGGTGATCTTGAAGACTGCTTGAGTAAATTGAAACCCCTTTTGTTCGACAAAGAGTTGAGAGAAACCATAGGAAAAGCTGCACGTAATGAAATGGAAAAATTTGATTGGAAGGCCGCCACACGAAAGGTTAGAAATGAACAATACAATGCTGCTATTTGGTTCTGGCGCAAGAAAAGGGCGATATTATTGAGACCCTTACAATGGATCAGTAAACGTGTTTTCCCATCACCACAAGTTAACTATAGATGA

Protein sequence

>Msa1151970

MNMNATSLSINLSTSSSYPSIVSLRFQRFSPLQAKPINISCRKPRVCSFQGLKTVNCRKSFVLEAINMDKAEVDSHEEEDKEEGTSSFSSSTSVDSENERNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKCLREMGDEVMVVTTHKGVPQEFYGAKLIGSWSFPLPWYQNVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVAADLTLVPSVAIGRDLQAARVTAANKIRLWNKGVDSESFHPRFRSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLGFIKGVMDKLPEARVAFIGDGPYREELEKMFEGMPAVFTGMLGGEVLSQAYASGDVFIMPSESETLGFVVLEAMSSGIPVVAARAGGIPDIIPADQEGKTGYLYNPGDLEDCLSKLKPLLFDKELRETIGKAARNEMEKFDWKAATRKVRNEQYNAAIWFWRKKRAILLRPLQWISKRVFPSPQVNYR*