Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009020 | AES77692.2 | 90.830 | 458 | 42 | 0 | 1 | 458 | 1 | 458 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009020 | sp|Q9LRQ8|PMAT2_ARATH | 39.829 | 467 | 249 | 14 | 4 | 458 | 5 | 451 | 1.12e-97 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009020 | G7L664 | 90.830 | 458 | 42 | 0 | 1 | 458 | 1 | 458 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa1009020 | 0.814132 | 1.800528e-51 | -8.615850e-47 |
| Msa0030590 | Msa1009020 | 0.805101 | 1.570498e-49 | -8.615850e-47 |
| Msa0051230 | Msa1009020 | -0.815498 | 8.964065e-52 | -8.615850e-47 |
| Msa0055590 | Msa1009020 | 0.813889 | 2.036439e-51 | -8.615850e-47 |
| Msa0621890 | Msa1009020 | 0.824457 | 7.990625e-54 | -8.615850e-47 |
| Msa0626230 | Msa1009020 | 0.814201 | 1.738472e-51 | -8.615850e-47 |
| Msa0636760 | Msa1009020 | 0.800422 | 1.451740e-48 | -8.615850e-47 |
| Msa0641020 | Msa1009020 | 0.814603 | 1.416124e-51 | -8.615850e-47 |
| Msa0645460 | Msa1009020 | 0.865292 | 6.563845e-65 | -8.615850e-47 |
| Msa0648090 | Msa1009020 | 0.805703 | 1.174722e-49 | -8.615850e-47 |
| Msa0684910 | Msa1009020 | 0.813058 | 3.101070e-51 | -8.615850e-47 |
| Msa0684920 | Msa1009020 | 0.805563 | 1.256682e-49 | -8.615850e-47 |
| Msa0703490 | Msa1009020 | 0.814061 | 1.866571e-51 | -8.615850e-47 |
| Msa0719490 | Msa1009020 | -0.806083 | 9.772837e-50 | -8.615850e-47 |
| Msa0740420 | Msa1009020 | 0.804847 | 1.774783e-49 | -8.615850e-47 |
| Msa0749550 | Msa1009020 | 0.825032 | 5.847453e-54 | -8.615850e-47 |
| Msa0749610 | Msa1009020 | 0.807827 | 4.178701e-50 | -8.615850e-47 |
| Msa0754680 | Msa1009020 | 0.823148 | 1.618458e-53 | -8.615850e-47 |
| Msa0782970 | Msa1009020 | 0.835490 | 1.628054e-56 | -8.615850e-47 |
| Msa0792510 | Msa1009020 | 0.828648 | 8.001190e-55 | -8.615850e-47 |
| Msa0796940 | Msa1009020 | 0.815491 | 8.994675e-52 | -8.615850e-47 |
| Msa0797350 | Msa1009020 | 0.818566 | 1.833564e-52 | -8.615850e-47 |
| Msa0801020 | Msa1009020 | 0.810199 | 1.297779e-50 | -8.615850e-47 |
| Msa0825620 | Msa1009020 | 0.842791 | 2.084044e-58 | -8.615850e-47 |
| Msa0834860 | Msa1009020 | 0.807134 | 5.862766e-50 | -8.615850e-47 |
| Msa0124110 | Msa1009020 | 0.812996 | 3.200698e-51 | -8.615850e-47 |
| Msa0125810 | Msa1009020 | 0.807449 | 5.026769e-50 | -8.615850e-47 |
| Msa0128370 | Msa1009020 | 0.803702 | 3.072344e-49 | -8.615850e-47 |
| Msa0137120 | Msa1009020 | -0.804426 | 2.172380e-49 | -8.615850e-47 |
| Msa0142240 | Msa1009020 | 0.803027 | 4.240826e-49 | -8.615850e-47 |
| Msa0165430 | Msa1009020 | 0.816682 | 4.876970e-52 | -8.615850e-47 |
| Msa0201330 | Msa1009020 | 0.820593 | 6.318302e-53 | -8.615850e-47 |
| Msa0201370 | Msa1009020 | 0.834553 | 2.803909e-56 | -8.615850e-47 |
| Msa0208390 | Msa1009020 | 0.856920 | 2.321083e-62 | -8.615850e-47 |
| Msa0226250 | Msa1009020 | 0.801355 | 9.361398e-49 | -8.615850e-47 |
| Msa0227800 | Msa1009020 | 0.800784 | 1.225017e-48 | -8.615850e-47 |
| Msa0233190 | Msa1009020 | 0.809879 | 1.520996e-50 | -8.615850e-47 |
| Msa0365360 | Msa1009020 | 0.828187 | 1.033697e-54 | -8.615850e-47 |
| Msa0403340 | Msa1009020 | 0.811848 | 5.701073e-51 | -8.615850e-47 |
| Msa0405250 | Msa1009020 | -0.811245 | 7.711495e-51 | -8.615850e-47 |
| Msa0416800 | Msa1009020 | 0.827556 | 1.465363e-54 | -8.615850e-47 |
| Msa0452680 | Msa1009020 | 0.808597 | 2.864670e-50 | -8.615850e-47 |
| Msa0463460 | Msa1009020 | 0.812143 | 4.917733e-51 | -8.615850e-47 |
| Msa0990920 | Msa1009020 | 0.819578 | 1.079063e-52 | -8.615850e-47 |
| Msa0994660 | Msa1009020 | 0.807857 | 4.117577e-50 | -8.615850e-47 |
| Msa1000020 | Msa1009020 | 0.810698 | 1.012945e-50 | -8.615850e-47 |
| Msa1001200 | Msa1009020 | 0.802882 | 4.543846e-49 | -8.615850e-47 |
| Msa1008340 | Msa1009020 | 0.804345 | 2.258234e-49 | -8.615850e-47 |
| Msa1008490 | Msa1009020 | 0.859827 | 3.159491e-63 | -8.615850e-47 |
| Msa1009000 | Msa1009020 | 0.834811 | 2.414909e-56 | -8.615850e-47 |
| Msa1009020 | Msa1018720 | 0.880497 | 5.229142e-70 | -8.615850e-47 |
| Msa1009020 | Msa1020710 | 0.812051 | 5.150620e-51 | -8.615850e-47 |
| Msa1009020 | Msa1025770 | 0.811674 | 6.222271e-51 | -8.615850e-47 |
| Msa1009020 | Msa1025830 | 0.816376 | 5.710802e-52 | -8.615850e-47 |
| Msa1009020 | Msa1032350 | 0.806285 | 8.861221e-50 | -8.615850e-47 |
| Msa1009020 | Msa1036350 | 0.804146 | 2.484933e-49 | -8.615850e-47 |
| Msa1009020 | Msa1036390 | 0.823937 | 1.058585e-53 | -8.615850e-47 |
| Msa1009020 | Msa1040120 | 0.809191 | 2.138051e-50 | -8.615850e-47 |
| Msa1009020 | Msa1041770 | 0.819255 | 1.278157e-52 | -8.615850e-47 |
| Msa1009020 | Msa1044090 | 0.807561 | 4.760624e-50 | -8.615850e-47 |
| Msa1009020 | Msa1049950 | 0.802734 | 4.874257e-49 | -8.615850e-47 |
| Msa1009020 | Msa1064420 | 0.804020 | 2.639798e-49 | -8.615850e-47 |
| Msa1009020 | Msa1069300 | 0.809306 | 2.020054e-50 | -8.615850e-47 |
| Msa1009020 | Msa1076630 | 0.826751 | 2.284656e-54 | -8.615850e-47 |
| Msa1009020 | Msa1076680 | 0.828217 | 1.016338e-54 | -8.615850e-47 |
| Msa1009020 | Msa1083410 | 0.861717 | 8.428521e-64 | -8.615850e-47 |
| Msa1009020 | Msa1098560 | 0.857700 | 1.364973e-62 | -8.615850e-47 |
| Msa1009020 | Msa1099030 | 0.842599 | 2.344065e-58 | -8.615850e-47 |
| Msa1009020 | Msa1101620 | 0.805255 | 1.458448e-49 | -8.615850e-47 |
| Msa1009020 | Msa1103610 | 0.800094 | 1.692988e-48 | -8.615850e-47 |
| Msa1009020 | Msa1109520 | 0.824534 | 7.661403e-54 | -8.615850e-47 |
| Msa1009020 | Msa1125040 | 0.873464 | 1.441508e-67 | -8.615850e-47 |
| Msa1009020 | Msa1128160 | 0.829912 | 3.946811e-55 | -8.615850e-47 |
| Msa1009020 | Msa1133660 | 0.807919 | 3.994408e-50 | -8.615850e-47 |
| Msa1009020 | Msa1139240 | 0.812561 | 3.985271e-51 | -8.615850e-47 |
| Msa1009020 | Msa1147190 | 0.846688 | 1.856204e-59 | -8.615850e-47 |
| Msa1009020 | Msa1151960 | 0.827693 | 1.359092e-54 | -8.615850e-47 |
| Msa1009020 | Msa1165360 | 0.831040 | 2.090987e-55 | -8.615850e-47 |
| Msa1009020 | Msa1167400 | 0.841497 | 4.583472e-58 | -8.615850e-47 |
| Msa1009020 | Msa1198270 | 0.802032 | 6.799162e-49 | -8.615850e-47 |
| Msa1009020 | Msa1201550 | 0.805631 | 1.216027e-49 | -8.615850e-47 |
| Msa1009020 | Msa1201990 | 0.837850 | 4.075870e-57 | -8.615850e-47 |
| Msa1009020 | Msa1208070 | 0.801132 | 1.040261e-48 | -8.615850e-47 |
| Msa1009020 | Msa1220230 | 0.824314 | 8.633510e-54 | -8.615850e-47 |
| Msa1009020 | Msa1242390 | 0.802093 | 6.605429e-49 | -8.615850e-47 |
| Msa1009020 | Msa1254770 | 0.833229 | 6.012367e-56 | -8.615850e-47 |
| Msa1009020 | Msa1254800 | 0.831516 | 1.596904e-55 | -8.615850e-47 |
| Msa1009020 | Msa1284140 | 0.804226 | 2.391536e-49 | -8.615850e-47 |
| Msa1009020 | Msa1294470 | 0.807642 | 4.575098e-50 | -8.615850e-47 |
| Msa1009020 | Msa1295010 | 0.826503 | 2.617874e-54 | -8.615850e-47 |
| Msa1009020 | Msa1303570 | 0.812232 | 4.701602e-51 | -8.615850e-47 |
| Msa1009020 | Msa1303640 | 0.810407 | 1.170478e-50 | -8.615850e-47 |
| Msa1009020 | Msa1329990 | 0.831148 | 1.967439e-55 | -8.615850e-47 |
| Msa1009020 | Msa1335770 | 0.810668 | 1.028256e-50 | -8.615850e-47 |
| Msa1009020 | Msa1373950 | 0.825809 | 3.827652e-54 | -8.615850e-47 |
| Msa1009020 | Msa1377100 | -0.815523 | 8.851368e-52 | -8.615850e-47 |
| Msa1009020 | Msa1397540 | 0.801397 | 9.177884e-49 | -8.615850e-47 |
| Msa1009020 | Msa1423080 | 0.856415 | 3.267697e-62 | -8.615850e-47 |
| Msa1009020 | Msa1430930 | 0.800611 | 1.328605e-48 | -8.615850e-47 |
| Msa1009020 | Msa1445250 | 0.807401 | 5.146798e-50 | -8.615850e-47 |
| Msa1009020 | Msa1454290 | -0.811423 | 7.053344e-51 | -8.615850e-47 |
| Msa1009020 | Msa1465900 | 0.814969 | 1.175137e-51 | -8.615850e-47 |
| Msa0243910 | Msa1009020 | 0.825333 | 4.963335e-54 | -8.615850e-47 |
| Msa0243930 | Msa1009020 | 0.832553 | 8.850310e-56 | -8.615850e-47 |
| Msa0260820 | Msa1009020 | -0.819453 | 1.152335e-52 | -8.615850e-47 |
| Msa0266000 | Msa1009020 | -0.817555 | 3.102941e-52 | -8.615850e-47 |
| Msa0275670 | Msa1009020 | 0.806814 | 6.850321e-50 | -8.615850e-47 |
| Msa0282590 | Msa1009020 | 0.850854 | 1.296944e-60 | -8.615850e-47 |
| Msa0290950 | Msa1009020 | 0.807487 | 4.934220e-50 | -8.615850e-47 |
| Msa0290970 | Msa1009020 | 0.810366 | 1.194462e-50 | -8.615850e-47 |
| Msa0303860 | Msa1009020 | -0.821849 | 3.243636e-53 | -8.615850e-47 |
| Msa0304740 | Msa1009020 | 0.852724 | 3.826548e-61 | -8.615850e-47 |
| Msa0304990 | Msa1009020 | 0.836511 | 8.963520e-57 | -8.615850e-47 |
| Msa0311580 | Msa1009020 | 0.807049 | 6.111977e-50 | -8.615850e-47 |
| Msa0331590 | Msa1009020 | 0.858283 | 9.163805e-63 | -8.615850e-47 |
| Msa0343200 | Msa1009020 | 0.808018 | 3.805204e-50 | -8.615850e-47 |
| Msa0357090 | Msa1009020 | 0.800081 | 1.704007e-48 | -8.615850e-47 |
| Msa0357100 | Msa1009020 | 0.839807 | 1.270669e-57 | -8.615850e-47 |
| Msa0362740 | Msa1009020 | 0.803747 | 3.007774e-49 | -8.615850e-47 |
| Msa0482870 | Msa1009020 | 0.824805 | 6.613662e-54 | -8.615850e-47 |
| Msa0509020 | Msa1009020 | 0.809938 | 1.477079e-50 | -8.615850e-47 |
| Msa0548720 | Msa1009020 | 0.817017 | 4.100658e-52 | -8.615850e-47 |
| Msa0557680 | Msa1009020 | 0.826032 | 3.389451e-54 | -8.615850e-47 |
| Msa0575250 | Msa1009020 | 0.808608 | 2.848391e-50 | -8.615850e-47 |
| Msa0583590 | Msa1009020 | 0.806352 | 8.576936e-50 | -8.615850e-47 |
| Msa0843280 | Msa1009020 | 0.814055 | 1.871608e-51 | -8.615850e-47 |
| Msa0847390 | Msa1009020 | 0.834093 | 3.657934e-56 | -8.615850e-47 |
| Msa0880080 | Msa1009020 | 0.860545 | 1.917397e-63 | -8.615850e-47 |
| Msa0887000 | Msa1009020 | 0.814617 | 1.406628e-51 | -8.615850e-47 |
| Msa0891010 | Msa1009020 | 0.802066 | 6.693080e-49 | -8.615850e-47 |
| Msa0900200 | Msa1009020 | 0.802914 | 4.475105e-49 | -8.615850e-47 |
| Msa0921630 | Msa1009020 | 0.832619 | 8.526963e-56 | -8.615850e-47 |
| Msa0946120 | Msa1009020 | 0.850911 | 1.249902e-60 | -8.615850e-47 |
| Msa0951720 | Msa1009020 | 0.831825 | 1.340057e-55 | -8.615850e-47 |
| Msa0960270 | Msa1009020 | 0.822168 | 2.737178e-53 | -8.615850e-47 |
| Msa0975420 | Msa1009020 | 0.802389 | 5.741214e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009020 | MtrunA17_Chr7g0219331 | 90.830 | 458 | 42 | 0 | 1 | 458 | 96 | 553 | 0.0 | 866 |
| Msa1009020 | MtrunA17_Chr7g0219331 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 3.04e-30 | 123 |
| Msa1009020 | MtrunA17_Chr7g0219301 | 89.427 | 454 | 48 | 0 | 2 | 455 | 4 | 457 | 0.0 | 845 |
| Msa1009020 | MtrunA17_Chr7g0219301 | 84.980 | 253 | 38 | 0 | 206 | 458 | 631 | 883 | 1.31e-149 | 448 |
| Msa1009020 | MtrunA17_Chr7g0219301 | 67.626 | 139 | 35 | 1 | 17 | 145 | 528 | 666 | 1.57e-50 | 184 |
| Msa1009020 | MtrunA17_Chr6g0455341 | 47.650 | 468 | 221 | 10 | 2 | 458 | 8 | 462 | 4.04e-146 | 425 |
| Msa1009020 | MtrunA17_Chr6g0455361 | 47.516 | 463 | 224 | 9 | 3 | 458 | 9 | 459 | 4.91e-143 | 417 |
| Msa1009020 | MtrunA17_Chr7g0219351 | 83.028 | 218 | 37 | 0 | 71 | 288 | 14 | 231 | 3.08e-133 | 383 |
| Msa1009020 | MtrunA17_Chr6g0454761 | 46.767 | 464 | 223 | 12 | 3 | 458 | 9 | 456 | 4.58e-130 | 399 |
| Msa1009020 | MtrunA17_Chr6g0454761 | 46.320 | 462 | 229 | 10 | 3 | 458 | 496 | 944 | 2.41e-129 | 397 |
| Msa1009020 | MtrunA17_Chr6g0455351 | 43.683 | 467 | 204 | 12 | 3 | 458 | 9 | 427 | 1.85e-120 | 358 |
| Msa1009020 | MtrunA17_Chr7g0219181 | 41.597 | 476 | 251 | 12 | 3 | 458 | 9 | 477 | 5.13e-111 | 336 |
| Msa1009020 | MtrunA17_Chr7g0219291 | 41.702 | 470 | 251 | 13 | 3 | 458 | 357 | 817 | 2.34e-106 | 334 |
| Msa1009020 | MtrunA17_Chr7g0219291 | 36.140 | 285 | 168 | 9 | 167 | 442 | 35 | 314 | 9.10e-38 | 146 |
| Msa1009020 | MtrunA17_Chr7g0219241 | 40.506 | 474 | 254 | 14 | 3 | 457 | 10 | 474 | 5.54e-106 | 323 |
| Msa1009020 | MtrunA17_Chr7g0219121 | 38.669 | 481 | 258 | 13 | 3 | 457 | 9 | 478 | 1.85e-99 | 306 |
| Msa1009020 | MtrunA17_Chr7g0219341 | 90.789 | 152 | 14 | 0 | 307 | 458 | 1 | 152 | 5.32e-97 | 288 |
| Msa1009020 | MtrunA17_Chr3g0087901 | 35.095 | 473 | 271 | 10 | 3 | 456 | 9 | 464 | 1.70e-87 | 275 |
| Msa1009020 | MtrunA17_Chr2g0323511 | 37.238 | 478 | 256 | 13 | 3 | 452 | 17 | 478 | 1.57e-86 | 273 |
| Msa1009020 | MtrunA17_Chr7g0219311 | 83.673 | 147 | 24 | 0 | 295 | 441 | 1 | 147 | 1.40e-83 | 253 |
| Msa1009020 | MtrunA17_Chr8g0339641 | 35.714 | 476 | 277 | 12 | 3 | 456 | 4 | 472 | 4.19e-81 | 258 |
| Msa1009020 | MtrunA17_Chr7g0219881 | 35.579 | 475 | 257 | 12 | 3 | 452 | 6 | 456 | 3.77e-80 | 256 |
| Msa1009020 | MtrunA17_Chr2g0323471 | 37.528 | 453 | 241 | 16 | 22 | 452 | 41 | 473 | 1.56e-78 | 252 |
| Msa1009020 | MtrunA17_Chr3g0124341 | 34.560 | 489 | 259 | 16 | 3 | 456 | 10 | 472 | 7.98e-74 | 239 |
| Msa1009020 | MtrunA17_Chr2g0323421 | 34.029 | 479 | 270 | 14 | 3 | 458 | 56 | 511 | 1.84e-73 | 239 |
| Msa1009020 | MtrunA17_Chr2g0323501 | 34.066 | 455 | 264 | 12 | 26 | 458 | 37 | 477 | 3.97e-73 | 238 |
| Msa1009020 | MtrunA17_Chr2g0323481 | 34.163 | 442 | 252 | 11 | 39 | 458 | 39 | 463 | 4.21e-73 | 237 |
| Msa1009020 | MtrunA17_Chr3g0083761 | 31.712 | 473 | 279 | 10 | 3 | 452 | 6 | 457 | 2.47e-69 | 228 |
| Msa1009020 | MtrunA17_Chr7g0219101 | 33.479 | 457 | 223 | 14 | 27 | 457 | 30 | 431 | 4.60e-69 | 226 |
| Msa1009020 | MtrunA17_Chr7g0219211 | 44.245 | 278 | 134 | 7 | 3 | 267 | 10 | 279 | 2.45e-67 | 219 |
| Msa1009020 | MtrunA17_Chr7g0219191 | 45.771 | 201 | 103 | 4 | 22 | 219 | 15 | 212 | 1.16e-51 | 174 |
| Msa1009020 | MtrunA17_Chr6g0454741 | 45.355 | 183 | 87 | 5 | 58 | 238 | 12 | 183 | 8.50e-45 | 156 |
| Msa1009020 | MtrunA17_Chr6g0454741 | 53.333 | 75 | 34 | 1 | 360 | 433 | 161 | 235 | 2.66e-13 | 69.3 |
| Msa1009020 | MtrunA17_Chr7g0219251 | 47.929 | 169 | 82 | 2 | 3 | 168 | 8 | 173 | 4.87e-44 | 152 |
| Msa1009020 | MtrunA17_Chr3g0092011 | 36.496 | 274 | 146 | 8 | 3 | 262 | 4 | 263 | 1.55e-41 | 149 |
| Msa1009020 | MtrunA17_Chr2g0323441 | 44.633 | 177 | 87 | 5 | 1 | 168 | 1 | 175 | 2.06e-36 | 132 |
| Msa1009020 | MtrunA17_Chr7g0219221 | 37.736 | 159 | 96 | 3 | 300 | 456 | 1 | 158 | 3.73e-28 | 109 |
| Msa1009020 | MtrunA17_Chr7g0219201 | 37.705 | 183 | 109 | 3 | 280 | 457 | 21 | 203 | 1.20e-26 | 106 |
| Msa1009020 | MtrunA17_Chr8g0359251 | 29.821 | 446 | 226 | 21 | 23 | 437 | 26 | 415 | 6.36e-25 | 106 |
| Msa1009020 | MtrunA17_Chr4g0053091 | 24.818 | 411 | 233 | 15 | 26 | 413 | 31 | 388 | 3.83e-22 | 98.6 |
| Msa1009020 | MtrunA17_Chr8g0371821 | 25.943 | 424 | 251 | 18 | 7 | 409 | 2 | 383 | 2.60e-21 | 95.9 |
| Msa1009020 | MtrunA17_Chr3g0087221 | 27.523 | 436 | 246 | 20 | 10 | 413 | 6 | 403 | 6.11e-21 | 95.1 |
| Msa1009020 | MtrunA17_Chr7g0253501 | 25.629 | 437 | 261 | 12 | 56 | 456 | 49 | 457 | 7.43e-21 | 94.7 |
| Msa1009020 | MtrunA17_Chr2g0334001 | 23.585 | 424 | 278 | 14 | 42 | 452 | 39 | 429 | 1.22e-20 | 94.0 |
| Msa1009020 | MtrunA17_Chr3g0125001 | 25.694 | 432 | 248 | 17 | 8 | 413 | 4 | 388 | 2.11e-20 | 93.2 |
| Msa1009020 | MtrunA17_Chr4g0053081 | 23.544 | 412 | 247 | 16 | 26 | 413 | 32 | 399 | 8.18e-20 | 91.7 |
| Msa1009020 | MtrunA17_Chr8g0374641 | 25.791 | 411 | 240 | 16 | 26 | 413 | 29 | 397 | 9.00e-20 | 91.3 |
| Msa1009020 | MtrunA17_Chr8g0386141 | 26.966 | 356 | 222 | 12 | 62 | 410 | 59 | 383 | 1.65e-19 | 90.5 |
| Msa1009020 | MtrunA17_Chr4g0053111 | 27.431 | 401 | 229 | 17 | 53 | 427 | 45 | 409 | 4.42e-19 | 89.4 |
| Msa1009020 | MtrunA17_Chr3g0132001 | 26.055 | 403 | 252 | 15 | 62 | 453 | 66 | 433 | 9.75e-19 | 88.2 |
| Msa1009020 | MtrunA17_Chr3g0087401 | 26.434 | 401 | 231 | 16 | 40 | 409 | 36 | 403 | 1.23e-18 | 88.2 |
| Msa1009020 | MtrunA17_Chr7g0224131 | 25.971 | 412 | 243 | 16 | 20 | 409 | 18 | 389 | 1.70e-18 | 87.4 |
| Msa1009020 | MtrunA17_Chr4g0010381 | 24.279 | 416 | 255 | 15 | 20 | 413 | 18 | 395 | 7.67e-18 | 85.5 |
| Msa1009020 | MtrunA17_Chr7g0253541 | 25.783 | 415 | 271 | 12 | 62 | 456 | 60 | 457 | 9.29e-18 | 85.5 |
| Msa1009020 | MtrunA17_Chr7g0253531 | 26.220 | 328 | 197 | 7 | 56 | 364 | 49 | 350 | 1.04e-17 | 85.5 |
| Msa1009020 | MtrunA17_Chr8g0374911 | 25.971 | 412 | 247 | 19 | 24 | 413 | 48 | 423 | 4.91e-17 | 83.2 |
| Msa1009020 | MtrunA17_Chr4g0053061 | 26.764 | 411 | 253 | 18 | 20 | 413 | 51 | 430 | 1.84e-16 | 81.6 |
| Msa1009020 | MtrunA17_Chr4g0010361 | 27.791 | 421 | 236 | 20 | 20 | 413 | 18 | 397 | 3.17e-16 | 80.5 |
| Msa1009020 | MtrunA17_Chr4g0072041 | 24.444 | 360 | 213 | 11 | 24 | 364 | 33 | 352 | 6.95e-16 | 79.7 |
| Msa1009020 | MtrunA17_Chr4g0010331 | 25.000 | 408 | 257 | 14 | 20 | 413 | 18 | 390 | 1.07e-15 | 79.0 |
| Msa1009020 | MtrunA17_Chr3g0134071 | 25.397 | 378 | 243 | 12 | 48 | 412 | 56 | 407 | 1.33e-15 | 79.0 |
| Msa1009020 | MtrunA17_Chr7g0224391 | 25.212 | 353 | 230 | 12 | 62 | 409 | 68 | 391 | 3.34e-15 | 77.4 |
| Msa1009020 | MtrunA17_Chr3g0134091 | 25.837 | 418 | 226 | 19 | 26 | 408 | 29 | 397 | 2.14e-14 | 75.1 |
| Msa1009020 | MtrunA17_Chr2g0311401 | 22.741 | 321 | 211 | 9 | 143 | 452 | 5 | 299 | 2.52e-13 | 70.5 |
| Msa1009020 | MtrunA17_Chr5g0408911 | 24.113 | 423 | 267 | 18 | 26 | 433 | 41 | 424 | 2.92e-13 | 71.6 |
| Msa1009020 | MtrunA17_Chr4g0010351 | 26.382 | 398 | 215 | 18 | 10 | 377 | 6 | 355 | 5.09e-13 | 70.5 |
| Msa1009020 | MtrunA17_Chr3g0092001 | 34.146 | 123 | 76 | 3 | 337 | 458 | 1 | 119 | 8.35e-13 | 65.1 |
| Msa1009020 | MtrunA17_Chr3g0134061 | 24.000 | 425 | 256 | 15 | 20 | 412 | 22 | 411 | 6.09e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009020 | AT3G29670.1 | 39.829 | 467 | 249 | 14 | 4 | 458 | 5 | 451 | 1.14e-98 | 303 |
| Msa1009020 | AT3G29635.1 | 39.866 | 449 | 233 | 12 | 24 | 456 | 27 | 454 | 2.26e-96 | 298 |
| Msa1009020 | AT5G39090.1 | 39.009 | 464 | 247 | 12 | 5 | 456 | 8 | 447 | 2.35e-95 | 295 |
| Msa1009020 | AT5G61160.1 | 36.864 | 472 | 259 | 12 | 3 | 458 | 4 | 452 | 1.05e-91 | 286 |
| Msa1009020 | AT5G39050.1 | 38.347 | 472 | 258 | 14 | 3 | 456 | 11 | 467 | 2.44e-90 | 283 |
| Msa1009020 | AT5G39080.1 | 36.989 | 465 | 263 | 12 | 4 | 452 | 7 | 457 | 3.06e-90 | 282 |
| Msa1009020 | AT3G29680.1 | 40.091 | 439 | 235 | 14 | 24 | 452 | 23 | 443 | 2.29e-88 | 277 |
| Msa1009020 | AT3G29590.1 | 36.966 | 468 | 251 | 12 | 4 | 456 | 10 | 448 | 2.60e-88 | 277 |
| Msa1009020 | AT1G03940.1 | 36.134 | 476 | 262 | 15 | 3 | 456 | 9 | 464 | 8.25e-84 | 266 |
| Msa1009020 | AT1G03495.1 | 35.000 | 360 | 198 | 11 | 1 | 340 | 1 | 344 | 7.26e-59 | 197 |
| Msa1009020 | AT3G29720.1 | 35.885 | 209 | 110 | 6 | 99 | 299 | 26 | 218 | 6.11e-29 | 114 |
| Msa1009020 | AT5G23940.1 | 25.536 | 466 | 273 | 16 | 3 | 436 | 4 | 427 | 3.39e-23 | 102 |
| Msa1009020 | AT2G19070.1 | 25.893 | 448 | 269 | 17 | 39 | 456 | 37 | 451 | 9.26e-23 | 100 |
| Msa1009020 | AT5G48930.1 | 23.195 | 457 | 300 | 18 | 9 | 448 | 4 | 426 | 1.53e-18 | 88.2 |
| Msa1009020 | AT1G31490.1 | 24.181 | 397 | 252 | 13 | 23 | 409 | 26 | 383 | 4.27e-18 | 86.7 |
| Msa1009020 | AT3G29690.1 | 33.562 | 146 | 89 | 4 | 312 | 455 | 38 | 177 | 1.36e-16 | 78.2 |
| Msa1009020 | AT5G67160.1 | 23.614 | 415 | 257 | 10 | 10 | 409 | 13 | 382 | 2.11e-16 | 81.6 |
| Msa1009020 | AT3G47170.1 | 26.502 | 283 | 170 | 10 | 62 | 328 | 70 | 330 | 2.21e-16 | 81.6 |
| Msa1009020 | AT5G67150.1 | 24.113 | 423 | 264 | 14 | 10 | 412 | 13 | 398 | 4.02e-16 | 80.9 |
| Msa1009020 | AT5G38130.1 | 25.362 | 414 | 249 | 18 | 29 | 423 | 52 | 424 | 4.30e-14 | 74.7 |
| Msa1009020 | AT5G07850.1 | 23.810 | 378 | 244 | 11 | 50 | 413 | 58 | 405 | 2.16e-13 | 72.4 |
| Msa1009020 | AT3G48720.1 | 23.944 | 355 | 232 | 14 | 62 | 409 | 61 | 384 | 2.26e-13 | 72.0 |
| Msa1009020 | AT4G31910.1 | 23.631 | 347 | 221 | 12 | 42 | 368 | 46 | 368 | 3.31e-13 | 71.6 |
| Msa1009020 | AT1G24430.1 | 22.851 | 442 | 270 | 15 | 26 | 450 | 29 | 416 | 4.31e-13 | 71.2 |
| Msa1009020 | AT3G26040.1 | 24.533 | 428 | 252 | 15 | 42 | 448 | 41 | 418 | 9.09e-13 | 70.5 |
| Msa1009020 | AT1G28680.1 | 23.050 | 282 | 193 | 5 | 62 | 342 | 62 | 320 | 2.24e-12 | 69.3 |
| Msa1009020 | AT1G28680.2 | 22.968 | 283 | 194 | 5 | 62 | 343 | 62 | 321 | 2.63e-12 | 68.6 |
Find 72 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGATTTATTTGGAGAAAA+TGG | 0.190102 | 7_1:-9779019 | Msa1009020:CDS |
| GTTAAAACAAGTGATTTATT+TGG | 0.208890 | 7_1:-9779028 | Msa1009020:CDS |
| AGAAAGGGATTGTTTGAGTT+TGG | 0.214942 | 7_1:+9779858 | None:intergenic |
| GCTGATTTCAATCATTTATC+TGG | 0.253026 | 7_1:-9779715 | Msa1009020:CDS |
| TGGTCATCATGGTTACTTAA+AGG | 0.264063 | 7_1:-9778920 | Msa1009020:CDS |
| GAAACCATTTCAACTTTCTT+TGG | 0.269632 | 7_1:+9778812 | None:intergenic |
| GTGCTATAAACCTCAAATTT+AGG | 0.277190 | 7_1:+9778854 | None:intergenic |
| TTACTTTCTTTGACATACTA+TGG | 0.279036 | 7_1:-9779960 | Msa1009020:CDS |
| CCAATTGAAAATCCGTAGTT+TGG | 0.297340 | 7_1:+9779592 | None:intergenic |
| CCAAACCATTAAGCTTCTAT+TGG | 0.298491 | 7_1:+9779348 | None:intergenic |
| AACAACCAATAGAAGCTTAA+TGG | 0.299594 | 7_1:-9779353 | Msa1009020:CDS |
| CAATAGAAGCTTAATGGTTT+GGG | 0.310409 | 7_1:-9779347 | Msa1009020:CDS |
| AGGCAAAATATTTGAGTGAT+TGG | 0.318923 | 7_1:-9779390 | Msa1009020:CDS |
| TCTCTTTCTGATTGTAGAAA+TGG | 0.323114 | 7_1:-9778767 | Msa1009020:CDS |
| CCAATAGAAGCTTAATGGTT+TGG | 0.323690 | 7_1:-9779348 | Msa1009020:CDS |
| TTTGGATATTGAAAAGCTTA+AGG | 0.336799 | 7_1:-9779275 | Msa1009020:CDS |
| AATGCTCTAAATGAATCTTC+TGG | 0.337408 | 7_1:+9779313 | None:intergenic |
| ATTATTTCAATTATCTCGTT+TGG | 0.347107 | 7_1:-9779293 | Msa1009020:CDS |
| ACATACTTTGGAAATTGTAT+TGG | 0.352174 | 7_1:-9779067 | Msa1009020:CDS |
| GAGGTTTATAGCACTGATTT+TGG | 0.354064 | 7_1:-9778845 | Msa1009020:CDS |
| GAAAGGGATTGTTTGAGTTT+GGG | 0.362666 | 7_1:+9779859 | None:intergenic |
| ACATGAACAAGCTTCTGTTT+TGG | 0.364822 | 7_1:-9779635 | Msa1009020:CDS |
| CCGATTCCTGCAACATACTT+TGG | 0.373253 | 7_1:-9779079 | Msa1009020:CDS |
| TCATGTGAAATATTCAAGTT+AGG | 0.378648 | 7_1:+9779652 | None:intergenic |
| AATTCACTTGTCAACATTTG+TGG | 0.379172 | 7_1:-9779206 | Msa1009020:CDS |
| ATTGGTTTGTGAGAATCATT+AGG | 0.380290 | 7_1:+9779790 | None:intergenic |
| CCTTTGATGAATTTGATGAT+TGG | 0.382399 | 7_1:+9779772 | None:intergenic |
| TAGAAGAAAATTCTTTGAAC+AGG | 0.387117 | 7_1:+9779925 | None:intergenic |
| CAATTTCCAAAGTATGTTGC+AGG | 0.392215 | 7_1:+9779073 | None:intergenic |
| TAGGTTTGAATATCGATTGC+AGG | 0.392519 | 7_1:-9779117 | Msa1009020:CDS |
| ATTTGTAGTGTCAAAACAAA+AGG | 0.406667 | 7_1:-9779251 | Msa1009020:CDS |
| CCAAAGTATGTTGCAGGAAT+CGG | 0.415495 | 7_1:+9779079 | None:intergenic |
| TGCTGGTTCACCTAAATTTG+AGG | 0.418931 | 7_1:-9778864 | Msa1009020:CDS |
| TGAAGTGTTGAGTGAAGCTT+TGG | 0.425405 | 7_1:-9778981 | Msa1009020:CDS |
| TGTTGAATGGAGCTGAAAAT+TGG | 0.429790 | 7_1:-9778940 | Msa1009020:CDS |
| AGTGAGAAAGTGTAAGAGAA+AGG | 0.431882 | 7_1:+9779842 | None:intergenic |
| ATTGTTTGAGTTTGGGAAGA+AGG | 0.432191 | 7_1:+9779866 | None:intergenic |
| AAAACCAAAGAAAGTTGAAA+TGG | 0.434697 | 7_1:-9778816 | Msa1009020:CDS |
| ATTGCTGATGTTAAAACAAT+TGG | 0.438756 | 7_1:-9778890 | Msa1009020:CDS |
| AATGGTGATGGTGTTGAGAT+AGG | 0.443549 | 7_1:-9778749 | Msa1009020:CDS |
| AGTATGTCAAAGAAAGTAAG+AGG | 0.444791 | 7_1:+9779964 | None:intergenic |
| TTAAAAGATGGTGTGTTGAA+TGG | 0.447020 | 7_1:-9778953 | Msa1009020:CDS |
| ATTACATTTCTATCATAGAA+AGG | 0.455442 | 7_1:+9779433 | None:intergenic |
| GTGAGAAAGTGTAAGAGAAA+GGG | 0.464182 | 7_1:+9779843 | None:intergenic |
| TGGTATCTATTGCTTATGCA+TGG | 0.464673 | 7_1:-9779186 | Msa1009020:CDS |
| AAGAAAATTCTTTGAACAGG+TGG | 0.476348 | 7_1:+9779928 | None:intergenic |
| GCTTTGGAAACTTTAAAAGA+TGG | 0.477917 | 7_1:-9778965 | Msa1009020:CDS |
| CAAGGATCCAAATGAATTTG+AGG | 0.481282 | 7_1:-9779410 | Msa1009020:CDS |
| ATGGTTTCTATAGATAGAAC+TGG | 0.490163 | 7_1:-9778797 | Msa1009020:CDS |
| TTGTTTGAGTTTGGGAAGAA+GGG | 0.491749 | 7_1:+9779867 | None:intergenic |
| GTTAAAACAATTGGTACTGC+TGG | 0.495742 | 7_1:-9778881 | Msa1009020:CDS |
| TGTCAAAACAAAAGGGTACT+AGG | 0.501108 | 7_1:-9779243 | Msa1009020:CDS |
| TTTGCTTCGCTCTTTGTCAA+AGG | 0.503257 | 7_1:-9778695 | Msa1009020:CDS |
| GGTATTTCTACTTGTGAAGA+TGG | 0.504447 | 7_1:+9780003 | None:intergenic |
| AAAGAAAGTAAGAGGAAGTG+AGG | 0.516885 | 7_1:+9779972 | None:intergenic |
| TTGAGTGATTGGTTAAAGCA+AGG | 0.525666 | 7_1:-9779379 | Msa1009020:CDS |
| CTATGATAGAAATGTAATCA+AGG | 0.525898 | 7_1:-9779428 | Msa1009020:CDS |
| TCTACAATCAGAAAGAGAAA+AGG | 0.535706 | 7_1:+9778772 | None:intergenic |
| AGAGGAAGTGAGGTTTCTGA+AGG | 0.537876 | 7_1:+9779982 | None:intergenic |
| AGAAAATTCTTTGAACAGGT+GGG | 0.549747 | 7_1:+9779929 | None:intergenic |
| GAGCTGAAAATTGGTCATCA+TGG | 0.557553 | 7_1:-9778931 | Msa1009020:CDS |
| TTTGTAGTGTCAAAACAAAA+GGG | 0.558518 | 7_1:-9779250 | Msa1009020:CDS |
| CCAATCATCAAATTCATCAA+AGG | 0.560308 | 7_1:-9779772 | Msa1009020:CDS |
| AAGAAAAGTGAGGTTTCGTG+TGG | 0.572135 | 7_1:+9779895 | None:intergenic |
| GGTATCTATTGCTTATGCAT+GGG | 0.580397 | 7_1:-9779185 | Msa1009020:CDS |
| CAAATGAGATGACCCAAAAG+AGG | 0.588902 | 7_1:+9779814 | None:intergenic |
| AAGGGTATTGAAGAAAAGTG+AGG | 0.604994 | 7_1:+9779885 | None:intergenic |
| AACTCATGTGGCAAACAAAG+TGG | 0.610535 | 7_1:+9779460 | None:intergenic |
| TCTGATTGTAGAAATGGTGA+TGG | 0.615354 | 7_1:-9778761 | Msa1009020:CDS |
| AGTGATTGGTTAAAGCAAGG+TGG | 0.623091 | 7_1:-9779376 | Msa1009020:CDS |
| ATCAGCATGAGATTCAGCTA+TGG | 0.626225 | 7_1:+9779732 | None:intergenic |
| TAGAAAGGACAAAACTCATG+TGG | 0.652604 | 7_1:+9779448 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTCTTTTATCAAATCTT+GGG | - | chr7_1:9779188-9779207 | Msa1009020:CDS | 20.0% |
| !! | ATTACATTTCTATCATAGAA+AGG | + | chr7_1:9779288-9779307 | None:intergenic | 20.0% |
| !! | ATTATTTCAATTATCTCGTT+TGG | - | chr7_1:9779425-9779444 | Msa1009020:CDS | 20.0% |
| !! | GTTAAAACAAGTGATTTATT+TGG | - | chr7_1:9779690-9779709 | Msa1009020:CDS | 20.0% |
| !!! | AACTTCTTTTATCAAATCTT+GGG | - | chr7_1:9779188-9779207 | Msa1009020:CDS | 20.0% |
| !! | ATTACATTTCTATCATAGAA+AGG | + | chr7_1:9779288-9779307 | None:intergenic | 20.0% |
| !! | ATTATTTCAATTATCTCGTT+TGG | - | chr7_1:9779425-9779444 | Msa1009020:CDS | 20.0% |
| !! | GTTAAAACAAGTGATTTATT+TGG | - | chr7_1:9779690-9779709 | Msa1009020:CDS | 20.0% |
| ! | TTACTTTCTTTGACATACTA+TGG | - | chr7_1:9778758-9778777 | Msa1009020:CDS | 25.0% |
| ! | TAGAAGAAAATTCTTTGAAC+AGG | + | chr7_1:9778796-9778815 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | + | chr7_1:9779069-9779088 | None:intergenic | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | - | chr7_1:9779187-9779206 | Msa1009020:CDS | 25.0% |
| !!! | CATTTTTAAGCTTTCTACAT+AGG | + | chr7_1:9779218-9779237 | None:intergenic | 25.0% |
| ! | CTATGATAGAAATGTAATCA+AGG | - | chr7_1:9779290-9779309 | Msa1009020:CDS | 25.0% |
| !! | TATTTTGCCTCAAATTCATT+TGG | + | chr7_1:9779318-9779337 | None:intergenic | 25.0% |
| ! | TTTGGATATTGAAAAGCTTA+AGG | - | chr7_1:9779443-9779462 | Msa1009020:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | - | chr7_1:9779467-9779486 | Msa1009020:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | - | chr7_1:9779468-9779487 | Msa1009020:CDS | 25.0% |
| !! | ACATACTTTGGAAATTGTAT+TGG | - | chr7_1:9779651-9779670 | Msa1009020:CDS | 25.0% |
| ! | AGTGATTTATTTGGAGAAAA+TGG | - | chr7_1:9779699-9779718 | Msa1009020:CDS | 25.0% |
| !!! | AATTGTTTTAACATCAGCAA+TGG | + | chr7_1:9779829-9779848 | None:intergenic | 25.0% |
| ! | ATTGCTGATGTTAAAACAAT+TGG | - | chr7_1:9779828-9779847 | Msa1009020:CDS | 25.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | - | chr7_1:9779902-9779921 | Msa1009020:CDS | 25.0% |
| ! | TTACTTTCTTTGACATACTA+TGG | - | chr7_1:9778758-9778777 | Msa1009020:CDS | 25.0% |
| ! | TAGAAGAAAATTCTTTGAAC+AGG | + | chr7_1:9778796-9778815 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | + | chr7_1:9779069-9779088 | None:intergenic | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | - | chr7_1:9779187-9779206 | Msa1009020:CDS | 25.0% |
| !!! | CATTTTTAAGCTTTCTACAT+AGG | + | chr7_1:9779218-9779237 | None:intergenic | 25.0% |
| ! | CTATGATAGAAATGTAATCA+AGG | - | chr7_1:9779290-9779309 | Msa1009020:CDS | 25.0% |
| !! | TATTTTGCCTCAAATTCATT+TGG | + | chr7_1:9779318-9779337 | None:intergenic | 25.0% |
| ! | TTTGGATATTGAAAAGCTTA+AGG | - | chr7_1:9779443-9779462 | Msa1009020:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | - | chr7_1:9779467-9779486 | Msa1009020:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | - | chr7_1:9779468-9779487 | Msa1009020:CDS | 25.0% |
| !! | ACATACTTTGGAAATTGTAT+TGG | - | chr7_1:9779651-9779670 | Msa1009020:CDS | 25.0% |
| ! | AGTGATTTATTTGGAGAAAA+TGG | - | chr7_1:9779699-9779718 | Msa1009020:CDS | 25.0% |
| !!! | AATTGTTTTAACATCAGCAA+TGG | + | chr7_1:9779829-9779848 | None:intergenic | 25.0% |
| ! | ATTGCTGATGTTAAAACAAT+TGG | - | chr7_1:9779828-9779847 | Msa1009020:CDS | 25.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | - | chr7_1:9779902-9779921 | Msa1009020:CDS | 25.0% |
| AGTATGTCAAAGAAAGTAAG+AGG | + | chr7_1:9778757-9778776 | None:intergenic | 30.0% | |
| AGAAAATTCTTTGAACAGGT+GGG | + | chr7_1:9778792-9778811 | None:intergenic | 30.0% | |
| AAGAAAATTCTTTGAACAGG+TGG | + | chr7_1:9778793-9778812 | None:intergenic | 30.0% | |
| !! | TTCTCACTTTTATCCTCTTT+TGG | - | chr7_1:9778891-9778910 | Msa1009020:CDS | 30.0% |
| !! | TCTCACTTTTATCCTCTTTT+GGG | - | chr7_1:9778892-9778911 | Msa1009020:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | + | chr7_1:9778931-9778950 | None:intergenic | 30.0% |
| ! | CCTTTGATGAATTTGATGAT+TGG | + | chr7_1:9778949-9778968 | None:intergenic | 30.0% |
| CCAATCATCAAATTCATCAA+AGG | - | chr7_1:9778946-9778965 | Msa1009020:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | - | chr7_1:9779003-9779022 | Msa1009020:CDS | 30.0% |
| !! | GTTACCATTTTTCCAAACTA+CGG | - | chr7_1:9779114-9779133 | Msa1009020:CDS | 30.0% |
| AAATCCGTAGTTTGGAAAAA+TGG | + | chr7_1:9779121-9779140 | None:intergenic | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | - | chr7_1:9779328-9779347 | Msa1009020:CDS | 30.0% | |
| AACAACCAATAGAAGCTTAA+TGG | - | chr7_1:9779365-9779384 | Msa1009020:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | - | chr7_1:9779371-9779390 | Msa1009020:CDS | 30.0% | |
| ! | AATGCTCTAAATGAATCTTC+TGG | + | chr7_1:9779408-9779427 | None:intergenic | 30.0% |
| AATTCACTTGTCAACATTTG+TGG | - | chr7_1:9779512-9779531 | Msa1009020:CDS | 30.0% | |
| GAGAACAAAAATGCTTTGAT+AGG | - | chr7_1:9779582-9779601 | Msa1009020:CDS | 30.0% | |
| !! | GCTTTGGAAACTTTAAAAGA+TGG | - | chr7_1:9779753-9779772 | Msa1009020:CDS | 30.0% |
| TTAAAAGATGGTGTGTTGAA+TGG | - | chr7_1:9779765-9779784 | Msa1009020:CDS | 30.0% | |
| GTGCTATAAACCTCAAATTT+AGG | + | chr7_1:9779867-9779886 | None:intergenic | 30.0% | |
| GAAACCATTTCAACTTTCTT+TGG | + | chr7_1:9779909-9779928 | None:intergenic | 30.0% | |
| ATGGTTTCTATAGATAGAAC+TGG | - | chr7_1:9779921-9779940 | Msa1009020:CDS | 30.0% | |
| TCTACAATCAGAAAGAGAAA+AGG | + | chr7_1:9779949-9779968 | None:intergenic | 30.0% | |
| TCTCTTTCTGATTGTAGAAA+TGG | - | chr7_1:9779951-9779970 | Msa1009020:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | - | chr7_1:9779995-9780014 | Msa1009020:CDS | 30.0% | |
| AGTATGTCAAAGAAAGTAAG+AGG | + | chr7_1:9778757-9778776 | None:intergenic | 30.0% | |
| AGAAAATTCTTTGAACAGGT+GGG | + | chr7_1:9778792-9778811 | None:intergenic | 30.0% | |
| AAGAAAATTCTTTGAACAGG+TGG | + | chr7_1:9778793-9778812 | None:intergenic | 30.0% | |
| !! | TTCTCACTTTTATCCTCTTT+TGG | - | chr7_1:9778891-9778910 | Msa1009020:CDS | 30.0% |
| !! | TCTCACTTTTATCCTCTTTT+GGG | - | chr7_1:9778892-9778911 | Msa1009020:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | + | chr7_1:9778931-9778950 | None:intergenic | 30.0% |
| ! | CCTTTGATGAATTTGATGAT+TGG | + | chr7_1:9778949-9778968 | None:intergenic | 30.0% |
| CCAATCATCAAATTCATCAA+AGG | - | chr7_1:9778946-9778965 | Msa1009020:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | - | chr7_1:9779003-9779022 | Msa1009020:CDS | 30.0% |
| !! | GTTACCATTTTTCCAAACTA+CGG | - | chr7_1:9779114-9779133 | Msa1009020:CDS | 30.0% |
| AAATCCGTAGTTTGGAAAAA+TGG | + | chr7_1:9779121-9779140 | None:intergenic | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | - | chr7_1:9779328-9779347 | Msa1009020:CDS | 30.0% | |
| AACAACCAATAGAAGCTTAA+TGG | - | chr7_1:9779365-9779384 | Msa1009020:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | - | chr7_1:9779371-9779390 | Msa1009020:CDS | 30.0% | |
| ! | AATGCTCTAAATGAATCTTC+TGG | + | chr7_1:9779408-9779427 | None:intergenic | 30.0% |
| AATTCACTTGTCAACATTTG+TGG | - | chr7_1:9779512-9779531 | Msa1009020:CDS | 30.0% | |
| GAGAACAAAAATGCTTTGAT+AGG | - | chr7_1:9779582-9779601 | Msa1009020:CDS | 30.0% | |
| !! | GCTTTGGAAACTTTAAAAGA+TGG | - | chr7_1:9779753-9779772 | Msa1009020:CDS | 30.0% |
| TTAAAAGATGGTGTGTTGAA+TGG | - | chr7_1:9779765-9779784 | Msa1009020:CDS | 30.0% | |
| GTGCTATAAACCTCAAATTT+AGG | + | chr7_1:9779867-9779886 | None:intergenic | 30.0% | |
| GAAACCATTTCAACTTTCTT+TGG | + | chr7_1:9779909-9779928 | None:intergenic | 30.0% | |
| ATGGTTTCTATAGATAGAAC+TGG | - | chr7_1:9779921-9779940 | Msa1009020:CDS | 30.0% | |
| TCTACAATCAGAAAGAGAAA+AGG | + | chr7_1:9779949-9779968 | None:intergenic | 30.0% | |
| TCTCTTTCTGATTGTAGAAA+TGG | - | chr7_1:9779951-9779970 | Msa1009020:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | - | chr7_1:9779995-9780014 | Msa1009020:CDS | 30.0% | |
| ! | GGTATTTCTACTTGTGAAGA+TGG | + | chr7_1:9778718-9778737 | None:intergenic | 35.0% |
| AAAGAAAGTAAGAGGAAGTG+AGG | + | chr7_1:9778749-9778768 | None:intergenic | 35.0% | |
| !! | AAGGGTATTGAAGAAAAGTG+AGG | + | chr7_1:9778836-9778855 | None:intergenic | 35.0% |
| ! | TTGTTTGAGTTTGGGAAGAA+GGG | + | chr7_1:9778854-9778873 | None:intergenic | 35.0% |
| ! | ATTGTTTGAGTTTGGGAAGA+AGG | + | chr7_1:9778855-9778874 | None:intergenic | 35.0% |
| ! | GAAAGGGATTGTTTGAGTTT+GGG | + | chr7_1:9778862-9778881 | None:intergenic | 35.0% |
| ! | AGAAAGGGATTGTTTGAGTT+TGG | + | chr7_1:9778863-9778882 | None:intergenic | 35.0% |
| ! | GTGAGAAAGTGTAAGAGAAA+GGG | + | chr7_1:9778878-9778897 | None:intergenic | 35.0% |
| ! | AGTGAGAAAGTGTAAGAGAA+AGG | + | chr7_1:9778879-9778898 | None:intergenic | 35.0% |
| ! | ACATGAACAAGCTTCTGTTT+TGG | - | chr7_1:9779083-9779102 | Msa1009020:CDS | 35.0% |
| CCAATTGAAAATCCGTAGTT+TGG | + | chr7_1:9779129-9779148 | None:intergenic | 35.0% | |
| ! | CCAAACTACGGATTTTCAAT+TGG | - | chr7_1:9779126-9779145 | Msa1009020:CDS | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | - | chr7_1:9779156-9779175 | Msa1009020:CDS | 35.0% |
| TAGAAAGGACAAAACTCATG+TGG | + | chr7_1:9779273-9779292 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTTG+AGG | - | chr7_1:9779308-9779327 | Msa1009020:CDS | 35.0% | |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | - | chr7_1:9779339-9779358 | Msa1009020:CDS | 35.0% |
| CCAAACCATTAAGCTTCTAT+TGG | + | chr7_1:9779373-9779392 | None:intergenic | 35.0% | |
| CCAATAGAAGCTTAATGGTT+TGG | - | chr7_1:9779370-9779389 | Msa1009020:CDS | 35.0% | |
| !! | TGTCAAAACAAAAGGGTACT+AGG | - | chr7_1:9779475-9779494 | Msa1009020:CDS | 35.0% |
| TGGTATCTATTGCTTATGCA+TGG | - | chr7_1:9779532-9779551 | Msa1009020:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+GGG | - | chr7_1:9779533-9779552 | Msa1009020:CDS | 35.0% | |
| ! | TAGGTTTGAATATCGATTGC+AGG | - | chr7_1:9779601-9779620 | Msa1009020:CDS | 35.0% |
| CAATTTCCAAAGTATGTTGC+AGG | + | chr7_1:9779648-9779667 | None:intergenic | 35.0% | |
| TGTTGAATGGAGCTGAAAAT+TGG | - | chr7_1:9779778-9779797 | Msa1009020:CDS | 35.0% | |
| TGGTCATCATGGTTACTTAA+AGG | - | chr7_1:9779798-9779817 | Msa1009020:CDS | 35.0% | |
| GTTAAAACAATTGGTACTGC+TGG | - | chr7_1:9779837-9779856 | Msa1009020:CDS | 35.0% | |
| !!! | GAGGTTTATAGCACTGATTT+TGG | - | chr7_1:9779873-9779892 | Msa1009020:CDS | 35.0% |
| !!! | TATAGCACTGATTTTGGTTG+TGG | - | chr7_1:9779879-9779898 | Msa1009020:CDS | 35.0% |
| TCTGATTGTAGAAATGGTGA+TGG | - | chr7_1:9779957-9779976 | Msa1009020:CDS | 35.0% | |
| ! | GGTATTTCTACTTGTGAAGA+TGG | + | chr7_1:9778718-9778737 | None:intergenic | 35.0% |
| AAAGAAAGTAAGAGGAAGTG+AGG | + | chr7_1:9778749-9778768 | None:intergenic | 35.0% | |
| !! | AAGGGTATTGAAGAAAAGTG+AGG | + | chr7_1:9778836-9778855 | None:intergenic | 35.0% |
| ! | TTGTTTGAGTTTGGGAAGAA+GGG | + | chr7_1:9778854-9778873 | None:intergenic | 35.0% |
| ! | ATTGTTTGAGTTTGGGAAGA+AGG | + | chr7_1:9778855-9778874 | None:intergenic | 35.0% |
| ! | GAAAGGGATTGTTTGAGTTT+GGG | + | chr7_1:9778862-9778881 | None:intergenic | 35.0% |
| ! | AGAAAGGGATTGTTTGAGTT+TGG | + | chr7_1:9778863-9778882 | None:intergenic | 35.0% |
| ! | GTGAGAAAGTGTAAGAGAAA+GGG | + | chr7_1:9778878-9778897 | None:intergenic | 35.0% |
| ! | AGTGAGAAAGTGTAAGAGAA+AGG | + | chr7_1:9778879-9778898 | None:intergenic | 35.0% |
| ! | ACATGAACAAGCTTCTGTTT+TGG | - | chr7_1:9779083-9779102 | Msa1009020:CDS | 35.0% |
| CCAATTGAAAATCCGTAGTT+TGG | + | chr7_1:9779129-9779148 | None:intergenic | 35.0% | |
| ! | CCAAACTACGGATTTTCAAT+TGG | - | chr7_1:9779126-9779145 | Msa1009020:CDS | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | - | chr7_1:9779156-9779175 | Msa1009020:CDS | 35.0% |
| TAGAAAGGACAAAACTCATG+TGG | + | chr7_1:9779273-9779292 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTTG+AGG | - | chr7_1:9779308-9779327 | Msa1009020:CDS | 35.0% | |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | - | chr7_1:9779339-9779358 | Msa1009020:CDS | 35.0% |
| CCAAACCATTAAGCTTCTAT+TGG | + | chr7_1:9779373-9779392 | None:intergenic | 35.0% | |
| CCAATAGAAGCTTAATGGTT+TGG | - | chr7_1:9779370-9779389 | Msa1009020:CDS | 35.0% | |
| !! | TGTCAAAACAAAAGGGTACT+AGG | - | chr7_1:9779475-9779494 | Msa1009020:CDS | 35.0% |
| TGGTATCTATTGCTTATGCA+TGG | - | chr7_1:9779532-9779551 | Msa1009020:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+GGG | - | chr7_1:9779533-9779552 | Msa1009020:CDS | 35.0% | |
| ! | TAGGTTTGAATATCGATTGC+AGG | - | chr7_1:9779601-9779620 | Msa1009020:CDS | 35.0% |
| CAATTTCCAAAGTATGTTGC+AGG | + | chr7_1:9779648-9779667 | None:intergenic | 35.0% | |
| TGTTGAATGGAGCTGAAAAT+TGG | - | chr7_1:9779778-9779797 | Msa1009020:CDS | 35.0% | |
| TGGTCATCATGGTTACTTAA+AGG | - | chr7_1:9779798-9779817 | Msa1009020:CDS | 35.0% | |
| GTTAAAACAATTGGTACTGC+TGG | - | chr7_1:9779837-9779856 | Msa1009020:CDS | 35.0% | |
| !!! | GAGGTTTATAGCACTGATTT+TGG | - | chr7_1:9779873-9779892 | Msa1009020:CDS | 35.0% |
| !!! | TATAGCACTGATTTTGGTTG+TGG | - | chr7_1:9779879-9779898 | Msa1009020:CDS | 35.0% |
| TCTGATTGTAGAAATGGTGA+TGG | - | chr7_1:9779957-9779976 | Msa1009020:CDS | 35.0% | |
| AAGAAAAGTGAGGTTTCGTG+TGG | + | chr7_1:9778826-9778845 | None:intergenic | 40.0% | |
| CAAATGAGATGACCCAAAAG+AGG | + | chr7_1:9778907-9778926 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGGTCATCTCATT+TGG | - | chr7_1:9778905-9778924 | Msa1009020:CDS | 40.0% |
| ATCAGCATGAGATTCAGCTA+TGG | + | chr7_1:9778989-9779008 | None:intergenic | 40.0% | |
| AACTCATGTGGCAAACAAAG+TGG | + | chr7_1:9779261-9779280 | None:intergenic | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | - | chr7_1:9779342-9779361 | Msa1009020:CDS | 40.0% |
| CCAAAGTATGTTGCAGGAAT+CGG | + | chr7_1:9779642-9779661 | None:intergenic | 40.0% | |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | - | chr7_1:9779737-9779756 | Msa1009020:CDS | 40.0% |
| GAGCTGAAAATTGGTCATCA+TGG | - | chr7_1:9779787-9779806 | Msa1009020:CDS | 40.0% | |
| !! | TGCTGGTTCACCTAAATTTG+AGG | - | chr7_1:9779854-9779873 | Msa1009020:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | - | chr7_1:9779969-9779988 | Msa1009020:CDS | 40.0% |
| TTTGCTTCGCTCTTTGTCAA+AGG | - | chr7_1:9780023-9780042 | Msa1009020:CDS | 40.0% | |
| AAGAAAAGTGAGGTTTCGTG+TGG | + | chr7_1:9778826-9778845 | None:intergenic | 40.0% | |
| CAAATGAGATGACCCAAAAG+AGG | + | chr7_1:9778907-9778926 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGGTCATCTCATT+TGG | - | chr7_1:9778905-9778924 | Msa1009020:CDS | 40.0% |
| ATCAGCATGAGATTCAGCTA+TGG | + | chr7_1:9778989-9779008 | None:intergenic | 40.0% | |
| AACTCATGTGGCAAACAAAG+TGG | + | chr7_1:9779261-9779280 | None:intergenic | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | - | chr7_1:9779342-9779361 | Msa1009020:CDS | 40.0% |
| CCAAAGTATGTTGCAGGAAT+CGG | + | chr7_1:9779642-9779661 | None:intergenic | 40.0% | |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | - | chr7_1:9779737-9779756 | Msa1009020:CDS | 40.0% |
| GAGCTGAAAATTGGTCATCA+TGG | - | chr7_1:9779787-9779806 | Msa1009020:CDS | 40.0% | |
| !! | TGCTGGTTCACCTAAATTTG+AGG | - | chr7_1:9779854-9779873 | Msa1009020:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | - | chr7_1:9779969-9779988 | Msa1009020:CDS | 40.0% |
| TTTGCTTCGCTCTTTGTCAA+AGG | - | chr7_1:9780023-9780042 | Msa1009020:CDS | 40.0% | |
| AGAGGAAGTGAGGTTTCTGA+AGG | + | chr7_1:9778739-9778758 | None:intergenic | 45.0% | |
| CCGATTCCTGCAACATACTT+TGG | - | chr7_1:9779639-9779658 | Msa1009020:CDS | 45.0% | |
| AGAGGAAGTGAGGTTTCTGA+AGG | + | chr7_1:9778739-9778758 | None:intergenic | 45.0% | |
| CCGATTCCTGCAACATACTT+TGG | - | chr7_1:9779639-9779658 | Msa1009020:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 9778682 | 9780058 | 9778682 | ID=Msa1009020;Name=Msa1009020 |
| chr7_1 | mRNA | 9778682 | 9780058 | 9778682 | ID=Msa1009020-mRNA-1;Parent=Msa1009020;Name=Msa1009020-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|458 |
| chr7_1 | exon | 9778682 | 9780058 | 9778682 | ID=Msa1009020-mRNA-1:exon:2740;Parent=Msa1009020-mRNA-1 |
| chr7_1 | CDS | 9778682 | 9780058 | 9778682 | ID=Msa1009020-mRNA-1:cds;Parent=Msa1009020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
