AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0207900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207900 MtrunA17_Chr2g0306391 99.036 415 4 0 1 415 1 415 0.0 853
Msa0207900 MtrunA17_Chr4g0062811 78.922 408 79 5 12 415 10 414 0.0 652
Msa0207900 MtrunA17_Chr3g0132041 56.584 281 113 4 128 399 103 383 5.90e-107 320
Msa0207900 MtrunA17_Chr7g0235761 45.333 300 143 6 121 399 67 366 7.57e-84 261
Msa0207900 MtrunA17_Chr1g0208941 47.601 271 115 2 121 391 75 318 5.08e-83 259
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207900 AT1G08510.1 76.296 405 87 5 1 399 1 402 0.0 608
Msa0207900 AT3G25110.1 46.644 298 136 7 121 400 68 360 1.13e-89 276
Msa0207900 AT4G13050.1 44.482 299 141 5 123 399 69 364 3.31e-86 267

Find 140 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAATTGTTGTTATATA+TGG 0.196107 2_1:+40811957 Msa0207900:three_prime_UTR
TCAAAATTGTTGATAGGTTT+TGG 0.207603 2_1:-40811631 None:intergenic
CACTCACATCGCTGGCTTGC+TGG 0.220561 2_1:+40808275 Msa0207900:five_prime_UTR
TGTCAAGATTTCCCCTGTTT+TGG 0.226691 2_1:-40810411 None:intergenic
TCGATTAGATCGTACGAAAT+AGG 0.231767 2_1:+40809491 Msa0207900:CDS
GAGTGCTCCACAGCCAATTT+TGG 0.252533 2_1:+40811417 Msa0207900:intron
AACCGCAGTTCCGTTGATTT+TGG 0.259020 2_1:-40809234 None:intergenic
GAAAACAAGTAAGGCTTTAT+AGG 0.268157 2_1:-40811730 None:intergenic
TCCATCTTCCAATTCATATA+TGG 0.276238 2_1:+40811871 Msa0207900:three_prime_UTR
GTTAAGACTGCCGGGCTTCT+TGG 0.280843 2_1:+40809681 Msa0207900:CDS
AGCTCATGACTCTCCAAAAT+TGG 0.291578 2_1:-40811430 None:intergenic
ATAATGTTTGTTTGTGTGTT+AGG 0.297244 2_1:-40808299 None:intergenic
TTCAGGATGGTCTTGTGTTT+CGG 0.325349 2_1:+40809459 Msa0207900:CDS
ATGATGGTGCCGAGATTGTT+AGG 0.330723 2_1:+40811590 Msa0207900:CDS
ATCTCTCCTCTGACCTCTTC+CGG 0.338263 2_1:-40810806 None:intergenic
TGATAGTGAGTCAAACATTT+AGG 0.340023 2_1:-40811683 None:intergenic
CTGTTATCCTCGTCCACAAC+TGG 0.341684 2_1:-40810854 None:intergenic
TCATCAATCAGTTGCCTGAT+TGG 0.344132 2_1:+40809315 Msa0207900:CDS
CTTGTGCGGGATGCCAAAAC+AGG 0.344885 2_1:+40810398 Msa0207900:CDS
GACGTTAATGAATCATTTGC+AGG 0.353941 2_1:+40809538 Msa0207900:CDS
TACCATAACCATATATGAAT+TGG 0.355189 2_1:-40811879 None:intergenic
TTCCAATTCATATATGGTTA+TGG 0.356436 2_1:+40811877 Msa0207900:three_prime_UTR
GAAGTACATTGGGTGGATTC+TGG 0.356450 2_1:+40811064 Msa0207900:CDS
AGAACATCAAAATTGTTGAT+AGG 0.357493 2_1:-40811637 None:intergenic
TGGTATAGGGAAAATTGTTC+AGG 0.362930 2_1:+40809442 Msa0207900:CDS
GATATGCTTGTTGACCCTTT+TGG 0.364899 2_1:+40809422 Msa0207900:CDS
GGGCTTCTTGGTGATGGCTT+TGG 0.374601 2_1:+40809693 Msa0207900:CDS
CTTCTCAGCAGCAAGGAAAA+TGG 0.375814 2_1:-40809363 None:intergenic
AAATCCAAGCAAAGCTCTAA+TGG 0.383578 2_1:+40809182 Msa0207900:CDS
AGCAGAACTAACTCCATGTT+TGG 0.390225 2_1:-40809144 None:intergenic
GATGAAGATGATGATGTAAC+AGG 0.397644 2_1:-40809101 None:intergenic
TATATGGTTATGGTACTGTT+AGG 0.400638 2_1:+40811887 Msa0207900:three_prime_UTR
GACACTTGGGTTTCTGCGGC+AGG 0.408861 2_1:+40810350 Msa0207900:CDS
ACTAACTAAACTTGATGATT+CGG 0.409649 2_1:+40810880 Msa0207900:CDS
AAAGGGTCAACAAGCATATC+AGG 0.416344 2_1:-40809419 None:intergenic
AACATCTAGATCATTCCATC+TGG 0.417317 2_1:-40811021 None:intergenic
GTTAATTCAACGGGTGAAAG+AGG 0.442886 2_1:+40811787 Msa0207900:three_prime_UTR
CAGTCCCTGACATCTGTCTC+TGG 0.445222 2_1:+40811505 Msa0207900:CDS
GCAAGAAGCATGCTCCAATC+AGG 0.445777 2_1:-40809329 None:intergenic
TAATGTTTGTTTGTGTGTTA+GGG 0.448038 2_1:-40808298 None:intergenic
CTAATATGTGTTAATTCAAC+GGG 0.450836 2_1:+40811778 Msa0207900:three_prime_UTR
TGAGCTGCATTCCATGACTT+TGG 0.456877 2_1:+40811447 Msa0207900:CDS
AAGAGAACTTTAAAAGCAGC+AGG 0.457388 2_1:+40808185 None:intergenic
AAGGAAACTATCTAAAATTC+CGG 0.457461 2_1:+40810787 Msa0207900:CDS
CAAGAGAATAGAGTTGAAAC+AGG 0.464573 2_1:-40808437 None:intergenic
CTTAATCATGTTAAGACTGC+CGG 0.467906 2_1:+40809672 Msa0207900:CDS
AGCAGTGGATGATGCTTGAT+TGG 0.473258 2_1:+40809384 Msa0207900:CDS
GTTAGTTCTGCTAACCTTGG+AGG 0.478639 2_1:+40809155 Msa0207900:CDS
GTGAGTGAGTGGCACAGAAT+TGG 0.479676 2_1:-40808259 None:intergenic
AAAATGGTATGCGTCGTGAT+TGG 0.485644 2_1:+40810375 Msa0207900:CDS
GAGATTGTTAGGGGTAGGAC+TGG 0.487479 2_1:+40811601 Msa0207900:CDS
TCTGTCTCTGGTGCTGACAT+TGG 0.489613 2_1:+40811517 Msa0207900:CDS
AACTGATTGATGAATGTCCT+TGG 0.491484 2_1:-40809305 None:intergenic
TATCAGCTGGAGGTGCAGAT+TGG 0.494151 2_1:+40811701 Msa0207900:three_prime_UTR
TGATGGTGCCGAGATTGTTA+GGG 0.496988 2_1:+40811591 Msa0207900:CDS
TTCTGATCCAGTTGTGGACG+AGG 0.498778 2_1:+40810847 Msa0207900:CDS
ACTGCCGGGCTTCTTGGTGA+TGG 0.499989 2_1:+40809687 Msa0207900:CDS
AAAGCCATCACCAAGAAGCC+CGG 0.500537 2_1:-40809691 None:intergenic
ACTATCTAAAATTCCGGAAG+AGG 0.500584 2_1:+40810793 Msa0207900:CDS
TGTTACTCGGATGCAGGTTG+TGG 0.502339 2_1:+40809755 Msa0207900:CDS
TATATAACGAAGTGGCTGGC+TGG 0.505440 2_1:+40808233 Msa0207900:five_prime_UTR
AACATTTAGGTGCTCTGTGA+TGG 0.506232 2_1:-40811670 None:intergenic
ACCATATATGAATTGGAAGA+TGG 0.507891 2_1:-40811872 None:intergenic
GTTAATAATGTGAAGTACAT+TGG 0.509594 2_1:+40811053 Msa0207900:CDS
TCAACGGGTGAAAGAGGGAT+AGG 0.509607 2_1:+40811793 Msa0207900:three_prime_UTR
GAGCAGAGGAAGAATAGAGT+AGG 0.510390 2_1:-40811850 None:intergenic
ATGTTTGACTCACTATCAGC+TGG 0.510915 2_1:+40811688 Msa0207900:three_prime_UTR
ATTCCATGACTTTGGAGTAC+AGG 0.511740 2_1:+40811455 Msa0207900:CDS
CACTTGCTTCGACTCGATGA+TGG 0.516598 2_1:+40811574 Msa0207900:CDS
ACTTGATATGGGTTGTTACT+CGG 0.517014 2_1:+40809742 Msa0207900:CDS
AGAACTAACTCCATGTTTGG+AGG 0.519503 2_1:-40809141 None:intergenic
GTGCCACTCACTCACATCGC+TGG 0.520638 2_1:+40808267 Msa0207900:five_prime_UTR
AGATCTCATGAAAACAAGTA+AGG 0.521133 2_1:-40811739 None:intergenic
ACTAATATGTGTTAATTCAA+CGG 0.521513 2_1:+40811777 Msa0207900:three_prime_UTR
TCGGCTGAATATATTCGCAC+TGG 0.521996 2_1:+40810899 Msa0207900:CDS
TAAGCCATTAGAGCTTTGCT+TGG 0.523646 2_1:-40809186 None:intergenic
TTAATAATGTGAAGTACATT+GGG 0.528885 2_1:+40811054 Msa0207900:CDS
TATATATATAACGAAGTGGC+TGG 0.531033 2_1:+40808229 Msa0207900:five_prime_UTR
TTAATCATGTTAAGACTGCC+GGG 0.532564 2_1:+40809673 Msa0207900:CDS
TCATCTTCATCTGACAGTGT+TGG 0.533513 2_1:+40809113 Msa0207900:CDS
TGACTCTCCAAAATTGGCTG+TGG 0.535831 2_1:-40811424 None:intergenic
CAGCACCAGAGACAGATGTC+AGG 0.537306 2_1:-40811510 None:intergenic
GTCCTTGGGTGATGTTGTGA+TGG 0.537958 2_1:-40809290 None:intergenic
ATGGGTTGTTACTCGGATGC+AGG 0.539000 2_1:+40809749 Msa0207900:CDS
TCCTTGCTGCTGAGAAGCAG+TGG 0.539829 2_1:+40809369 Msa0207900:CDS
AGATTGTTAGGGGTAGGACT+GGG 0.539935 2_1:+40811602 Msa0207900:CDS
GGAGTTAGTTCTGCTAACCT+TGG 0.540076 2_1:+40809152 Msa0207900:CDS
GAGAACTTTAAAAGCAGCAG+GGG 0.541825 2_1:+40808187 None:intergenic
TGAATTGGAAGATGGAGCAG+AGG 0.546647 2_1:-40811864 None:intergenic
AAGTTGTTCAAGTAGACACT+TGG 0.551856 2_1:+40810336 Msa0207900:CDS
GCGTCGTGATTGGCTTGTGC+GGG 0.553139 2_1:+40810385 Msa0207900:CDS
TTGTTAGGGGTAGGACTGGG+TGG 0.554507 2_1:+40811605 Msa0207900:CDS
TTGGAAATTTAGCTGACAGC+GGG 0.555268 2_1:+40811536 Msa0207900:CDS
TGAAGAGAAGAGAAGAGAAG+AGG 0.555485 2_1:-40808328 None:intergenic
TTGTGCGGGATGCCAAAACA+GGG 0.559601 2_1:+40810399 Msa0207900:CDS
GCTTGGATTTGAATCCTCCA+AGG 0.561042 2_1:-40809169 None:intergenic
ACTGATTGATGAATGTCCTT+GGG 0.565331 2_1:-40809304 None:intergenic
TGTTAATTCTGATCCAGTTG+TGG 0.567572 2_1:+40810841 Msa0207900:CDS
TTAATTCAACGGGTGAAAGA+GGG 0.576794 2_1:+40811788 Msa0207900:three_prime_UTR
AGTCCTACCCCTAACAATCT+CGG 0.577020 2_1:-40811599 None:intergenic
AGTACAGGAGGGAATGTGGC+AGG 0.577889 2_1:+40811470 Msa0207900:CDS
TGCGTCGTGATTGGCTTGTG+CGG 0.578969 2_1:+40810384 Msa0207900:CDS
TTAGGGGTAGGACTGGGTGG+AGG 0.580415 2_1:+40811608 Msa0207900:CDS
ATAATGTGAAGTACATTGGG+TGG 0.582097 2_1:+40811057 Msa0207900:CDS
ACAAGCATATCAGGTCGTCT+AGG 0.587704 2_1:-40809410 None:intergenic
AAATCTTGACAAGAGCATCC+AGG 0.590317 2_1:+40810423 Msa0207900:CDS
ACATCTAGATCATTCCATCT+GGG 0.591455 2_1:-40811020 None:intergenic
CCATGACTTTGGAGTACAGG+AGG 0.592758 2_1:+40811458 Msa0207900:CDS
TCCACTGCTTCTCAGCAGCA+AGG 0.592772 2_1:-40809370 None:intergenic
CCTCCTGTACTCCAAAGTCA+TGG 0.597089 2_1:-40811458 None:intergenic
GGTTACAACTACGACGGTGA+AGG 0.598952 2_1:+40809253 Msa0207900:CDS
CGTTATATATATAATCCACC+TGG 0.600787 2_1:-40808219 None:intergenic
CAACGGGTGAAAGAGGGATA+GGG 0.600933 2_1:+40811794 Msa0207900:three_prime_UTR
GTTGGAAAATCCTCCAAACA+TGG 0.605432 2_1:+40809131 Msa0207900:CDS
AGTTGTTCAAGTAGACACTT+GGG 0.611713 2_1:+40810337 Msa0207900:CDS
TTGGAGTACAGGAGGGAATG+TGG 0.613380 2_1:+40811466 Msa0207900:CDS
AGAGAACTTTAAAAGCAGCA+GGG 0.621042 2_1:+40808186 None:intergenic
AGCACCAGAGACAGATGTCA+GGG 0.622472 2_1:-40811509 None:intergenic
CACCATCACAACATCACCCA+AGG 0.625250 2_1:+40809288 Msa0207900:CDS
AGTAGACACTTGGGTTTCTG+CGG 0.630478 2_1:+40810346 Msa0207900:CDS
CATGACTTTGGAGTACAGGA+GGG 0.633124 2_1:+40811459 Msa0207900:CDS
GATGGTGCCGAGATTGTTAG+GGG 0.638472 2_1:+40811592 Msa0207900:CDS
GTGCCGAGATTGTTAGGGGT+AGG 0.642317 2_1:+40811596 Msa0207900:CDS
AAGCCAGCGATGTGAGTGAG+TGG 0.643224 2_1:-40808270 None:intergenic
TGGTTGATCGTTATCCGACG+TGG 0.644890 2_1:+40809775 Msa0207900:CDS
GCAGCACCTTCCAAAATCAA+CGG 0.646470 2_1:+40809224 Msa0207900:CDS
ATAGGGAAAATTGTTCAGGA+TGG 0.648420 2_1:+40809446 Msa0207900:CDS
TCATGATGAATAAACTGACA+AGG 0.652704 2_1:+40810768 Msa0207900:CDS
AAAATTCCGGAAGAGGTCAG+AGG 0.654352 2_1:+40810800 Msa0207900:CDS
CTCAGCAGCAAGGAAAATGG+TGG 0.660147 2_1:-40809360 None:intergenic
GGATTATATATATAACGAAG+TGG 0.664627 2_1:+40808225 Msa0207900:five_prime_UTR
ATTGGAAATTTAGCTGACAG+CGG 0.670615 2_1:+40811535 Msa0207900:CDS
GTACATTGGGTGGATTCTGG+AGG 0.672791 2_1:+40811067 Msa0207900:CDS
TTCCAAAATCAACGGAACTG+CGG 0.674773 2_1:+40809232 Msa0207900:CDS
TTTGACTCACTATCAGCTGG+AGG 0.685307 2_1:+40811691 Msa0207900:three_prime_UTR
AACTGCGGTTACAACTACGA+CGG 0.716495 2_1:+40809247 Msa0207900:CDS
TAGATCGTACGAAATAGGTG+CGG 0.735860 2_1:+40809496 Msa0207900:CDS
AGAACTTTAAAAGCAGCAGG+GGG 0.739894 2_1:+40808188 None:intergenic
TGTGCGGGATGCCAAAACAG+GGG 0.744085 2_1:+40810400 Msa0207900:CDS
AAGGTTAAGACTAACCACGT+CGG 0.758321 2_1:-40809789 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGAACAAAAAAAAAA+AGG - chr2_1:40808643-40808662 None:intergenic 10.0%
!!! TTTTTGTAATTTTCTTTTTT+GGG - chr2_1:40808794-40808813 None:intergenic 10.0%
!!! TTTTTTGTAATTTTCTTTTT+TGG - chr2_1:40808795-40808814 None:intergenic 10.0%
!!! ATTATCAATTTTTGTAAAAT+AGG - chr2_1:40810605-40810624 None:intergenic 10.0%
!!! ATTTAATTTTTTCTTCAAAA+TGG + chr2_1:40811923-40811942 Msa0207900:three_prime_UTR 10.0%
!!! TATTAAATTGTTGTTATATA+TGG + chr2_1:40811957-40811976 Msa0207900:three_prime_UTR 10.0%
!!! TATTGTTATTGTTTTTTTTC+TGG + chr2_1:40808907-40808926 Msa0207900:intron 15.0%
!!! TAATTATTTGTTTTGATAAC+AGG + chr2_1:40809641-40809660 Msa0207900:intron 15.0%
!!! TACAAACTTTTTATAAAAGT+AGG - chr2_1:40810125-40810144 None:intergenic 15.0%
!! ACTAAACAAATAATCAAAAA+GGG - chr2_1:40811345-40811364 None:intergenic 15.0%
!!! GAGATTTTGAATTTTGAATA+TGG - chr2_1:40808370-40808389 None:intergenic 20.0%
!!! AATTTTTTTCTTTCTGTTTG+TGG + chr2_1:40808563-40808582 Msa0207900:intron 20.0%
!! TTAAGTGATTATACAAAGTT+AGG - chr2_1:40808834-40808853 None:intergenic 20.0%
!! TGTATAATCACTTAAATTCA+AGG + chr2_1:40808839-40808858 Msa0207900:intron 20.0%
!!! TTGTTTTGTAGATGTTATTA+TGG + chr2_1:40808990-40809009 Msa0207900:intron 20.0%
!!! TTTATGTAACAAATTTGTTG+TGG + chr2_1:40809594-40809613 Msa0207900:intron 20.0%
!!! TTATGTAACAAATTTGTTGT+GGG + chr2_1:40809595-40809614 Msa0207900:intron 20.0%
!!! AGCTTTATACATATGAATTT+TGG + chr2_1:40810031-40810050 Msa0207900:intron 20.0%
!!! GCTTTATACATATGAATTTT+GGG + chr2_1:40810032-40810051 Msa0207900:intron 20.0%
!!! TATGCTTGAAATTATGTTTT+TGG + chr2_1:40810257-40810276 Msa0207900:intron 20.0%
!!! AACATTTTCAACATATCTTA+TGG - chr2_1:40810491-40810510 None:intergenic 20.0%
!! TTAATAATGTGAAGTACATT+GGG + chr2_1:40811054-40811073 Msa0207900:CDS 20.0%
!! ATCTTTGATAAACAAATCAA+TGG + chr2_1:40811211-40811230 Msa0207900:intron 20.0%
!! GACTAAACAAATAATCAAAA+AGG - chr2_1:40811346-40811365 None:intergenic 20.0%
!! TGTTTAGTCAATAAACTTAT+CGG + chr2_1:40811357-40811376 Msa0207900:intron 20.0%
!! ACTAATATGTGTTAATTCAA+CGG + chr2_1:40811777-40811796 Msa0207900:three_prime_UTR 20.0%
!! ACTTTCATTGGAAAAAAATA+AGG - chr2_1:40811988-40812007 None:intergenic 20.0%
! GGATTATATATATAACGAAG+TGG + chr2_1:40808225-40808244 Msa0207900:five_prime_UTR 25.0%
! TAATGTTTGTTTGTGTGTTA+GGG - chr2_1:40808301-40808320 None:intergenic 25.0%
! ATAATGTTTGTTTGTGTGTT+AGG - chr2_1:40808302-40808321 None:intergenic 25.0%
!! TCATTTTCTCTCATTCTTTA+AGG + chr2_1:40808462-40808481 Msa0207900:five_prime_UTR 25.0%
! ATAATCACTTAAATTCAAGG+TGG + chr2_1:40808842-40808861 Msa0207900:intron 25.0%
! ACAACAACAAAACAACAATT+TGG - chr2_1:40808933-40808952 None:intergenic 25.0%
! GCACATTTAACAAATCAAAA+AGG - chr2_1:40809811-40809830 None:intergenic 25.0%
! ATTTAACCTAATCTTCAATC+TGG - chr2_1:40809978-40809997 None:intergenic 25.0%
! AAGATTAGGTTAAATTCTTC+TGG + chr2_1:40809983-40810002 Msa0207900:intron 25.0%
! AGATTAGGTTAAATTCTTCT+GGG + chr2_1:40809984-40810003 Msa0207900:intron 25.0%
! ACAGGGTATGAAATATAAAA+TGG + chr2_1:40810078-40810097 Msa0207900:intron 25.0%
!! TTTTACCATAATATGTAGCT+AGG - chr2_1:40810163-40810182 None:intergenic 25.0%
!!! TTTTGCAATTTCTGATTTGT+TGG + chr2_1:40810715-40810734 Msa0207900:intron 25.0%
!! TTTTGATGTTTTACAGTGTT+TGG + chr2_1:40810744-40810763 Msa0207900:intron 25.0%
!! TTTGATGTTTTACAGTGTTT+GGG + chr2_1:40810745-40810764 Msa0207900:intron 25.0%
!! AAGGAAACTATCTAAAATTC+CGG + chr2_1:40810787-40810806 Msa0207900:CDS 25.0%
!! ACTAACTAAACTTGATGATT+CGG + chr2_1:40810880-40810899 Msa0207900:CDS 25.0%
! GTTAATAATGTGAAGTACAT+TGG + chr2_1:40811053-40811072 Msa0207900:CDS 25.0%
! ATATCAACAGTAGAATGAAT+TGG + chr2_1:40811298-40811317 Msa0207900:intron 25.0%
! GTTTAGTCAATAAACTTATC+GGG + chr2_1:40811358-40811377 Msa0207900:intron 25.0%
!!! TCAAAATTGTTGATAGGTTT+TGG - chr2_1:40811634-40811653 None:intergenic 25.0%
! AGAACATCAAAATTGTTGAT+AGG - chr2_1:40811640-40811659 None:intergenic 25.0%
! CTAATATGTGTTAATTCAAC+GGG + chr2_1:40811778-40811797 Msa0207900:three_prime_UTR 25.0%
! TTCCAATTCATATATGGTTA+TGG + chr2_1:40811877-40811896 Msa0207900:three_prime_UTR 25.0%
! TACCATAACCATATATGAAT+TGG - chr2_1:40811882-40811901 None:intergenic 25.0%
CGTTATATATATAATCCACC+TGG - chr2_1:40808222-40808241 None:intergenic 30.0%
TATATATATAACGAAGTGGC+TGG + chr2_1:40808229-40808248 Msa0207900:five_prime_UTR 30.0%
! CAAACATATTCCACACTTTT+TGG + chr2_1:40808389-40808408 Msa0207900:five_prime_UTR 30.0%
GAATTAGAATCCAAAAAGTG+TGG - chr2_1:40808402-40808421 None:intergenic 30.0%
! AAACAGGTCTGTATTGTTTT+TGG - chr2_1:40808424-40808443 None:intergenic 30.0%
!! TTTTGTTTCTTCTATGAAGC+TGG - chr2_1:40808534-40808553 None:intergenic 30.0%
!!! GTTGTTTTAAATTTGCATGC+AGG + chr2_1:40809032-40809051 Msa0207900:intron 30.0%
! CAATTTTCCCTATACCAAAA+GGG - chr2_1:40809439-40809458 None:intergenic 30.0%
! ACAATTTTCCCTATACCAAA+AGG - chr2_1:40809440-40809459 None:intergenic 30.0%
! AAGTTCTTTTTGCACATTTC+TGG - chr2_1:40809726-40809745 None:intergenic 30.0%
TGTGCAAAAAGAACTTGATA+TGG + chr2_1:40809730-40809749 Msa0207900:CDS 30.0%
GTGCAAAAAGAACTTGATAT+GGG + chr2_1:40809731-40809750 Msa0207900:CDS 30.0%
!! TGCTATCTCTATTTCTATCT+TGG + chr2_1:40809848-40809867 Msa0207900:intron 30.0%
! ATAGCTAAACTTTTTGTCTC+AGG + chr2_1:40809940-40809959 Msa0207900:intron 30.0%
AACAATTTGCAAAGTACAGA+CGG - chr2_1:40810222-40810241 None:intergenic 30.0%
AGTGAATCTATATTTGCTTC+AGG + chr2_1:40810309-40810328 Msa0207900:intron 30.0%
GTGAATCTATATTTGCTTCA+GGG + chr2_1:40810310-40810329 Msa0207900:intron 30.0%
TGAATCTATATTTGCTTCAG+GGG + chr2_1:40810311-40810330 Msa0207900:intron 30.0%
GCTTGAAAGATTAAAAACAG+TGG - chr2_1:40810547-40810566 None:intergenic 30.0%
!! TCAGTTTGCTTTTGTCAAAT+CGG + chr2_1:40810632-40810651 Msa0207900:intron 30.0%
TCATGATGAATAAACTGACA+AGG + chr2_1:40810768-40810787 Msa0207900:CDS 30.0%
TAGTAGAGATTGTCTGAATA+AGG + chr2_1:40811175-40811194 Msa0207900:intron 30.0%
! TGATAGTGAGTCAAACATTT+AGG - chr2_1:40811686-40811705 None:intergenic 30.0%
! GAAAACAAGTAAGGCTTTAT+AGG - chr2_1:40811733-40811752 None:intergenic 30.0%
AGATCTCATGAAAACAAGTA+AGG - chr2_1:40811742-40811761 None:intergenic 30.0%
TCCATCTTCCAATTCATATA+TGG + chr2_1:40811871-40811890 Msa0207900:three_prime_UTR 30.0%
ACCATATATGAATTGGAAGA+TGG - chr2_1:40811875-40811894 None:intergenic 30.0%
TATATGGTTATGGTACTGTT+AGG + chr2_1:40811887-40811906 Msa0207900:three_prime_UTR 30.0%
CAAGAGAATAGAGTTGAAAC+AGG - chr2_1:40808440-40808459 None:intergenic 35.0%
! AGGAATAAAACGCATCGTTT+TGG - chr2_1:40808490-40808509 None:intergenic 35.0%
! CTTTCTGTTTGTGGCTTTTA+AGG + chr2_1:40808572-40808591 Msa0207900:intron 35.0%
TGCAGGTGTAAAAATCAACA+TGG + chr2_1:40809049-40809068 Msa0207900:intron 35.0%
! GATGAAGATGATGATGTAAC+AGG - chr2_1:40809104-40809123 None:intergenic 35.0%
! AAATCCAAGCAAAGCTCTAA+TGG + chr2_1:40809182-40809201 Msa0207900:CDS 35.0%
ACTGATTGATGAATGTCCTT+GGG - chr2_1:40809307-40809326 None:intergenic 35.0%
AACTGATTGATGAATGTCCT+TGG - chr2_1:40809308-40809327 None:intergenic 35.0%
! TTGTTGACCCTTTTGGTATA+GGG + chr2_1:40809429-40809448 Msa0207900:CDS 35.0%
TGGTATAGGGAAAATTGTTC+AGG + chr2_1:40809442-40809461 Msa0207900:CDS 35.0%
ATAGGGAAAATTGTTCAGGA+TGG + chr2_1:40809446-40809465 Msa0207900:CDS 35.0%
TCGATTAGATCGTACGAAAT+AGG + chr2_1:40809491-40809510 Msa0207900:CDS 35.0%
GACGTTAATGAATCATTTGC+AGG + chr2_1:40809538-40809557 Msa0207900:CDS 35.0%
CTTAATCATGTTAAGACTGC+CGG + chr2_1:40809672-40809691 Msa0207900:CDS 35.0%
TTAATCATGTTAAGACTGCC+GGG + chr2_1:40809673-40809692 Msa0207900:CDS 35.0%
! ACTTGATATGGGTTGTTACT+CGG + chr2_1:40809742-40809761 Msa0207900:CDS 35.0%
ATAGCACCAGATTGAAGATT+AGG + chr2_1:40809969-40809988 Msa0207900:intron 35.0%
TTGGGATTTCCTTTGTCTTT+AGG + chr2_1:40810050-40810069 Msa0207900:intron 35.0%
TTTGTCTTTAGGCTGTTACA+GGG + chr2_1:40810061-40810080 Msa0207900:intron 35.0%
! GTTAGCCTAGCTACATATTA+TGG + chr2_1:40810155-40810174 Msa0207900:intron 35.0%
AAGTTGTTCAAGTAGACACT+TGG + chr2_1:40810336-40810355 Msa0207900:CDS 35.0%
AGTTGTTCAAGTAGACACTT+GGG + chr2_1:40810337-40810356 Msa0207900:CDS 35.0%
!! GTTCTGAATTGACTTTTACC+TGG - chr2_1:40810444-40810463 None:intergenic 35.0%
! ACTATCTAAAATTCCGGAAG+AGG + chr2_1:40810793-40810812 Msa0207900:CDS 35.0%
TGTTAATTCTGATCCAGTTG+TGG + chr2_1:40810841-40810860 Msa0207900:CDS 35.0%
ACATCTAGATCATTCCATCT+GGG - chr2_1:40811023-40811042 None:intergenic 35.0%
AACATCTAGATCATTCCATC+TGG - chr2_1:40811024-40811043 None:intergenic 35.0%
ATAATGTGAAGTACATTGGG+TGG + chr2_1:40811057-40811076 Msa0207900:CDS 35.0%
! GAATGAATTGGTCACTTTAG+AGG + chr2_1:40811310-40811329 Msa0207900:intron 35.0%
ATTGGAAATTTAGCTGACAG+CGG + chr2_1:40811535-40811554 Msa0207900:CDS 35.0%
TTAATTCAACGGGTGAAAGA+GGG + chr2_1:40811788-40811807 Msa0207900:three_prime_UTR 35.0%
TGAAGAGAAGAGAAGAGAAG+AGG - chr2_1:40808331-40808350 None:intergenic 40.0%
TGTTTCTTCTATGAAGCTGG+TGG - chr2_1:40808531-40808550 None:intergenic 40.0%
GAAAGTCTCAAATGAAGCTC+AGG - chr2_1:40808694-40808713 None:intergenic 40.0%
TCATCTTCATCTGACAGTGT+TGG + chr2_1:40809113-40809132 Msa0207900:CDS 40.0%
GTTGGAAAATCCTCCAAACA+TGG + chr2_1:40809131-40809150 Msa0207900:CDS 40.0%
AGAACTAACTCCATGTTTGG+AGG - chr2_1:40809144-40809163 None:intergenic 40.0%
AGCAGAACTAACTCCATGTT+TGG - chr2_1:40809147-40809166 None:intergenic 40.0%
TAAGCCATTAGAGCTTTGCT+TGG - chr2_1:40809189-40809208 None:intergenic 40.0%
TTCCAAAATCAACGGAACTG+CGG + chr2_1:40809232-40809251 Msa0207900:CDS 40.0%
TCATCAATCAGTTGCCTGAT+TGG + chr2_1:40809315-40809334 Msa0207900:CDS 40.0%
AAAGGGTCAACAAGCATATC+AGG - chr2_1:40809422-40809441 None:intergenic 40.0%
!! GATATGCTTGTTGACCCTTT+TGG + chr2_1:40809422-40809441 Msa0207900:CDS 40.0%
! CTTGTTGACCCTTTTGGTAT+AGG + chr2_1:40809428-40809447 Msa0207900:CDS 40.0%
!! TTCAGGATGGTCTTGTGTTT+CGG + chr2_1:40809459-40809478 Msa0207900:CDS 40.0%
TAGATCGTACGAAATAGGTG+CGG + chr2_1:40809496-40809515 Msa0207900:CDS 40.0%
AAGGTTAAGACTAACCACGT+CGG - chr2_1:40809792-40809811 None:intergenic 40.0%
TAGAGATAGCAGCTGAACTA+AGG - chr2_1:40809839-40809858 None:intergenic 40.0%
CTGTAACAGCCTAAAGACAA+AGG - chr2_1:40810062-40810081 None:intergenic 40.0%
CTTTGTCTTTAGGCTGTTAC+AGG + chr2_1:40810060-40810079 Msa0207900:intron 40.0%
AAAATGGTATGCGTCGTGAT+TGG + chr2_1:40810375-40810394 Msa0207900:CDS 40.0%
! TGTCAAGATTTCCCCTGTTT+TGG - chr2_1:40810414-40810433 None:intergenic 40.0%
!! AAATCTTGACAAGAGCATCC+AGG + chr2_1:40810423-40810442 Msa0207900:CDS 40.0%
AGTGAAGAAAGGAGCAAGAA+AGG - chr2_1:40810466-40810485 None:intergenic 40.0%
TTTCTTGCTCCTTTCTTCAC+TGG + chr2_1:40810465-40810484 Msa0207900:intron 40.0%
ATCTTATGGCCAGTGAAGAA+AGG - chr2_1:40810477-40810496 None:intergenic 40.0%
! ATCTCTATTTTCAGCCCAGA+TGG + chr2_1:40811006-40811025 Msa0207900:intron 40.0%
CAATCAAACCACAATCCCTT+TGG - chr2_1:40811392-40811411 None:intergenic 40.0%
AGCTCATGACTCTCCAAAAT+TGG - chr2_1:40811433-40811452 None:intergenic 40.0%
!! ATTCCATGACTTTGGAGTAC+AGG + chr2_1:40811455-40811474 Msa0207900:CDS 40.0%
TTGGAAATTTAGCTGACAGC+GGG + chr2_1:40811536-40811555 Msa0207900:CDS 40.0%
AACATTTAGGTGCTCTGTGA+TGG - chr2_1:40811673-40811692 None:intergenic 40.0%
ATGTTTGACTCACTATCAGC+TGG + chr2_1:40811688-40811707 Msa0207900:three_prime_UTR 40.0%
GTTAATTCAACGGGTGAAAG+AGG + chr2_1:40811787-40811806 Msa0207900:three_prime_UTR 40.0%
TATATAACGAAGTGGCTGGC+TGG + chr2_1:40808233-40808252 Msa0207900:five_prime_UTR 45.0%
GGAGGTGAATGAGAATGAGA+AGG - chr2_1:40808510-40808529 None:intergenic 45.0%
TTCTTCTATGAAGCTGGTGG+AGG - chr2_1:40808528-40808547 None:intergenic 45.0%
ATTCAAGGTGGTTGAGAGAG+AGG + chr2_1:40808854-40808873 Msa0207900:intron 45.0%
!! GGAGTTAGTTCTGCTAACCT+TGG + chr2_1:40809152-40809171 Msa0207900:CDS 45.0%
!! GTTAGTTCTGCTAACCTTGG+AGG + chr2_1:40809155-40809174 Msa0207900:CDS 45.0%
GCTTGGATTTGAATCCTCCA+AGG - chr2_1:40809172-40809191 None:intergenic 45.0%
GCAGCACCTTCCAAAATCAA+CGG + chr2_1:40809224-40809243 Msa0207900:CDS 45.0%
!!! GCAGTTCCGTTGATTTTGGA+AGG - chr2_1:40809233-40809252 None:intergenic 45.0%
!!! AACCGCAGTTCCGTTGATTT+TGG - chr2_1:40809237-40809256 None:intergenic 45.0%
AACTGCGGTTACAACTACGA+CGG + chr2_1:40809247-40809266 Msa0207900:CDS 45.0%
CTTCTCAGCAGCAAGGAAAA+TGG - chr2_1:40809366-40809385 None:intergenic 45.0%
AGCAGTGGATGATGCTTGAT+TGG + chr2_1:40809384-40809403 Msa0207900:CDS 45.0%
ACAAGCATATCAGGTCGTCT+AGG - chr2_1:40809413-40809432 None:intergenic 45.0%
AGTAGACACTTGGGTTTCTG+CGG + chr2_1:40810346-40810365 Msa0207900:CDS 45.0%
GTTTCTGCGGCAGGAAAAAA+TGG + chr2_1:40810359-40810378 Msa0207900:CDS 45.0%
AAAAACAGTGGCCAGTCACA+AGG - chr2_1:40810535-40810554 None:intergenic 45.0%
AAAATTCCGGAAGAGGTCAG+AGG + chr2_1:40810800-40810819 Msa0207900:CDS 45.0%
TCGGCTGAATATATTCGCAC+TGG + chr2_1:40810899-40810918 Msa0207900:CDS 45.0%
! GAAGTACATTGGGTGGATTC+TGG + chr2_1:40811064-40811083 Msa0207900:CDS 45.0%
CCACAATCCCTTTGGTTAAG+CGG - chr2_1:40811384-40811403 None:intergenic 45.0%
TGACTCTCCAAAATTGGCTG+TGG - chr2_1:40811427-40811446 None:intergenic 45.0%
TGAGCTGCATTCCATGACTT+TGG + chr2_1:40811447-40811466 Msa0207900:CDS 45.0%
!! CATGACTTTGGAGTACAGGA+GGG + chr2_1:40811459-40811478 Msa0207900:CDS 45.0%
! ATGATGGTGCCGAGATTGTT+AGG + chr2_1:40811590-40811609 Msa0207900:CDS 45.0%
! TGATGGTGCCGAGATTGTTA+GGG + chr2_1:40811591-40811610 Msa0207900:CDS 45.0%
AGTCCTACCCCTAACAATCT+CGG - chr2_1:40811602-40811621 None:intergenic 45.0%
AGATTGTTAGGGGTAGGACT+GGG + chr2_1:40811602-40811621 Msa0207900:CDS 45.0%
TTTGACTCACTATCAGCTGG+AGG + chr2_1:40811691-40811710 Msa0207900:three_prime_UTR 45.0%
GAGCAGAGGAAGAATAGAGT+AGG - chr2_1:40811853-40811872 None:intergenic 45.0%
TGAATTGGAAGATGGAGCAG+AGG - chr2_1:40811867-40811886 None:intergenic 45.0%
GTGAGTGAGTGGCACAGAAT+TGG - chr2_1:40808262-40808281 None:intergenic 50.0%
GGTTACAACTACGACGGTGA+AGG + chr2_1:40809253-40809272 Msa0207900:CDS 50.0%
CACCATCACAACATCACCCA+AGG + chr2_1:40809288-40809307 Msa0207900:CDS 50.0%
GTCCTTGGGTGATGTTGTGA+TGG - chr2_1:40809293-40809312 None:intergenic 50.0%
! GCAAGAAGCATGCTCCAATC+AGG - chr2_1:40809332-40809351 None:intergenic 50.0%
CTCAGCAGCAAGGAAAATGG+TGG - chr2_1:40809363-40809382 None:intergenic 50.0%
AAAGCCATCACCAAGAAGCC+CGG - chr2_1:40809694-40809713 None:intergenic 50.0%
! ATGGGTTGTTACTCGGATGC+AGG + chr2_1:40809749-40809768 Msa0207900:CDS 50.0%
TGTTACTCGGATGCAGGTTG+TGG + chr2_1:40809755-40809774 Msa0207900:CDS 50.0%
TGGTTGATCGTTATCCGACG+TGG + chr2_1:40809775-40809794 Msa0207900:CDS 50.0%
TTGTGCGGGATGCCAAAACA+GGG + chr2_1:40810399-40810418 Msa0207900:CDS 50.0%
GAATGTGCATGCCTTGTGAC+TGG + chr2_1:40810521-40810540 Msa0207900:intron 50.0%
ATCTCTCCTCTGACCTCTTC+CGG - chr2_1:40810809-40810828 None:intergenic 50.0%
TTCTGATCCAGTTGTGGACG+AGG + chr2_1:40810847-40810866 Msa0207900:CDS 50.0%
CTGTTATCCTCGTCCACAAC+TGG - chr2_1:40810857-40810876 None:intergenic 50.0%
! GTACATTGGGTGGATTCTGG+AGG + chr2_1:40811067-40811086 Msa0207900:CDS 50.0%
AACAAGAACGCGAGAAAGCG+AGG - chr2_1:40811130-40811149 None:intergenic 50.0%
TTATCGGGCCGCTTAACCAA+AGG + chr2_1:40811373-40811392 Msa0207900:intron 50.0%
TATCGGGCCGCTTAACCAAA+GGG + chr2_1:40811374-40811393 Msa0207900:intron 50.0%
CCGCTTAACCAAAGGGATTG+TGG + chr2_1:40811381-40811400 Msa0207900:intron 50.0%
! GAGTGCTCCACAGCCAATTT+TGG + chr2_1:40811417-40811436 Msa0207900:intron 50.0%
CCTCCTGTACTCCAAAGTCA+TGG - chr2_1:40811461-40811480 None:intergenic 50.0%
!! CCATGACTTTGGAGTACAGG+AGG + chr2_1:40811458-40811477 Msa0207900:CDS 50.0%
TTGGAGTACAGGAGGGAATG+TGG + chr2_1:40811466-40811485 Msa0207900:CDS 50.0%
AGCACCAGAGACAGATGTCA+GGG - chr2_1:40811512-40811531 None:intergenic 50.0%
!! TCTGTCTCTGGTGCTGACAT+TGG + chr2_1:40811517-40811536 Msa0207900:CDS 50.0%
! CACTTGCTTCGACTCGATGA+TGG + chr2_1:40811574-40811593 Msa0207900:CDS 50.0%
! GATGGTGCCGAGATTGTTAG+GGG + chr2_1:40811592-40811611 Msa0207900:CDS 50.0%
GAGATTGTTAGGGGTAGGAC+TGG + chr2_1:40811601-40811620 Msa0207900:CDS 50.0%
! TATCAGCTGGAGGTGCAGAT+TGG + chr2_1:40811701-40811720 Msa0207900:three_prime_UTR 50.0%
TCAACGGGTGAAAGAGGGAT+AGG + chr2_1:40811793-40811812 Msa0207900:three_prime_UTR 50.0%
CAACGGGTGAAAGAGGGATA+GGG + chr2_1:40811794-40811813 Msa0207900:three_prime_UTR 50.0%
AAGCCAGCGATGTGAGTGAG+TGG - chr2_1:40808273-40808292 None:intergenic 55.0%
TCCTTGCTGCTGAGAAGCAG+TGG + chr2_1:40809369-40809388 Msa0207900:CDS 55.0%
TCCACTGCTTCTCAGCAGCA+AGG - chr2_1:40809373-40809392 None:intergenic 55.0%
GTTAAGACTGCCGGGCTTCT+TGG + chr2_1:40809681-40809700 Msa0207900:CDS 55.0%
!! GGGCTTCTTGGTGATGGCTT+TGG + chr2_1:40809693-40809712 Msa0207900:CDS 55.0%
!! TGCGTCGTGATTGGCTTGTG+CGG + chr2_1:40810384-40810403 Msa0207900:CDS 55.0%
CTTGTGCGGGATGCCAAAAC+AGG + chr2_1:40810398-40810417 Msa0207900:CDS 55.0%
TGTGCGGGATGCCAAAACAG+GGG + chr2_1:40810400-40810419 Msa0207900:CDS 55.0%
AGAACGCGAGAAAGCGAGGA+GGG - chr2_1:40811126-40811145 None:intergenic 55.0%
AAGAACGCGAGAAAGCGAGG+AGG - chr2_1:40811127-40811146 None:intergenic 55.0%
AGTACAGGAGGGAATGTGGC+AGG + chr2_1:40811470-40811489 Msa0207900:CDS 55.0%
CAGTCCCTGACATCTGTCTC+TGG + chr2_1:40811505-40811524 Msa0207900:CDS 55.0%
CAGCACCAGAGACAGATGTC+AGG - chr2_1:40811513-40811532 None:intergenic 55.0%
GTGCCGAGATTGTTAGGGGT+AGG + chr2_1:40811596-40811615 Msa0207900:CDS 55.0%
TTGTTAGGGGTAGGACTGGG+TGG + chr2_1:40811605-40811624 Msa0207900:CDS 55.0%
! GTGCCACTCACTCACATCGC+TGG + chr2_1:40808267-40808286 Msa0207900:five_prime_UTR 60.0%
!! CACTCACATCGCTGGCTTGC+TGG + chr2_1:40808275-40808294 Msa0207900:five_prime_UTR 60.0%
ACTGCCGGGCTTCTTGGTGA+TGG + chr2_1:40809687-40809706 Msa0207900:CDS 60.0%
GACACTTGGGTTTCTGCGGC+AGG + chr2_1:40810350-40810369 Msa0207900:CDS 60.0%
!! GCGTCGTGATTGGCTTGTGC+GGG + chr2_1:40810385-40810404 Msa0207900:CDS 60.0%
GAACGCGAGAAAGCGAGGAG+GGG - chr2_1:40811125-40811144 None:intergenic 60.0%
TTAGGGGTAGGACTGGGTGG+AGG + chr2_1:40811608-40811627 Msa0207900:CDS 60.0%
CAGCAGGGGGCGGGATAGCC+AGG + chr2_1:40808201-40808220 Msa0207900:five_prime_UTR 75.0%
CAGGGGGCGGGATAGCCAGG+TGG + chr2_1:40808204-40808223 Msa0207900:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 40808193 40812013 40808193 ID=Msa0207900;Name=Msa0207900
chr2_1 mRNA 40808193 40812013 40808193 ID=Msa0207900-mRNA-1;Parent=Msa0207900;Name=Msa0207900-mRNA-1;_AED=0.05;_eAED=0.05;_QI=305|1|1|1|0.83|0.71|7|326|415
chr2_1 exon 40808193 40808483 40808193 ID=Msa0207900-mRNA-1:exon:12589;Parent=Msa0207900-mRNA-1
chr2_1 exon 40809054 40809559 40809054 ID=Msa0207900-mRNA-1:exon:12590;Parent=Msa0207900-mRNA-1
chr2_1 exon 40809663 40809796 40809663 ID=Msa0207900-mRNA-1:exon:12591;Parent=Msa0207900-mRNA-1
chr2_1 exon 40810331 40810444 40810331 ID=Msa0207900-mRNA-1:exon:12592;Parent=Msa0207900-mRNA-1
chr2_1 exon 40810760 40810928 40810760 ID=Msa0207900-mRNA-1:exon:12593;Parent=Msa0207900-mRNA-1
chr2_1 exon 40811020 40811088 40811020 ID=Msa0207900-mRNA-1:exon:12594;Parent=Msa0207900-mRNA-1
chr2_1 exon 40811418 40812013 40811418 ID=Msa0207900-mRNA-1:exon:12595;Parent=Msa0207900-mRNA-1
chr2_1 five_prime_UTR 40808193 40808483 40808193 ID=Msa0207900-mRNA-1:five_prime_utr;Parent=Msa0207900-mRNA-1
chr2_1 five_prime_UTR 40809054 40809067 40809054 ID=Msa0207900-mRNA-1:five_prime_utr;Parent=Msa0207900-mRNA-1
chr2_1 CDS 40809068 40809559 40809068 ID=Msa0207900-mRNA-1:cds;Parent=Msa0207900-mRNA-1
chr2_1 CDS 40809663 40809796 40809663 ID=Msa0207900-mRNA-1:cds;Parent=Msa0207900-mRNA-1
chr2_1 CDS 40810331 40810444 40810331 ID=Msa0207900-mRNA-1:cds;Parent=Msa0207900-mRNA-1
chr2_1 CDS 40810760 40810928 40810760 ID=Msa0207900-mRNA-1:cds;Parent=Msa0207900-mRNA-1
chr2_1 CDS 40811020 40811088 40811020 ID=Msa0207900-mRNA-1:cds;Parent=Msa0207900-mRNA-1
chr2_1 CDS 40811418 40811687 40811418 ID=Msa0207900-mRNA-1:cds;Parent=Msa0207900-mRNA-1
chr2_1 three_prime_UTR 40811688 40812013 40811688 ID=Msa0207900-mRNA-1:three_prime_utr;Parent=Msa0207900-mRNA-1
Gene Sequence

>Msa0207900

ATGGTTGCAACTGCTGCAACATCTTCGTTCTTTCCTGTTACATCATCATCTTCATCTGACAGTGTTGGAAAATCCTCCAAACATGGAGTTAGTTCTGCTAACCTTGGAGGATTCAAATCCAAGCAAAGCTCTAATGGCTTAAACATTAAAGCAAATGCAGCACCTTCCAAAATCAACGGAACTGCGGTTACAACTACGACGGTGAAGGTTGAAAATGATTCACCATCACAACATCACCCAAGGACATTCATCAATCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTGTTACCACCATTTTCCTTGCTGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCTAGACGACCTGATATGCTTGTTGACCCTTTTGGTATAGGGAAAATTGTTCAGGATGGTCTTGTGTTTCGGCAAAACTTTTCGATTAGATCGTACGAAATAGGTGCGGATAAAACTGCGTCTATAGAGACGTTAATGAATCATTTGCAGGAAACTGCACTTAATCATGTTAAGACTGCCGGGCTTCTTGGTGATGGCTTTGGTTCTACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTTGTTACTCGGATGCAGGTTGTGGTTGATCGTTATCCGACGTGGGGTGAAGTTGTTCAAGTAGACACTTGGGTTTCTGCGGCAGGAAAAAATGGTATGCGTCGTGATTGGCTTGTGCGGGATGCCAAAACAGGGGAAATCTTGACAAGAGCATCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAAACTATCTAAAATTCCGGAAGAGGTCAGAGGAGAGATAGAGCATTATTTTGTTAATTCTGATCCAGTTGTGGACGAGGATAACAGAAAACTAACTAAACTTGATGATTCGGCTGAATATATTCGCACTGGTTTAAGTCCCAGATGGAATGATCTAGATGTTAATCAGCATGTTAATAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCAATTTTGGAGAGTCATGAGCTGCATTCCATGACTTTGGAGTACAGGAGGGAATGTGGCAGGAACAGTGTACTTCAGTCCCTGACATCTGTCTCTGGTGCTGACATTGGAAATTTAGCTGACAGCGGGTTTGTTGAATGCAAACACTTGCTTCGACTCGATGATGGTGCCGAGATTGTTAGGGGTAGGACTGGGTGGAGGCCAAAACCTATCAACAATTTTGATGTTCTGAATCAGTTTCCATCACAGAGCACCTAA

Protein sequence

>Msa0207900

MVATAATSSFFPVTSSSSSDSVGKSSKHGVSSANLGGFKSKQSSNGLNIKANAAPSKINGTAVTTTTVKVENDSPSQHHPRTFINQLPDWSMLLAAVTTIFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGEVVQVDTWVSAAGKNGMRRDWLVRDAKTGEILTRASSVWVMMNKLTRKLSKIPEEVRGEIEHYFVNSDPVVDEDNRKLTKLDDSAEYIRTGLSPRWNDLDVNQHVNNVKYIGWILESAPQPILESHELHSMTLEYRRECGRNSVLQSLTSVSGADIGNLADSGFVECKHLLRLDDGAEIVRGRTGWRPKPINNFDVLNQFPSQST*