Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35140.t1 | XP_013457341.1 | 98 | 460 | 4 | 1 | 1 | 455 | 1 | 460 | 1.20E-246 | 862.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35140.t1 | Q54T05 | 58.7 | 329 | 119 | 2 | 1 | 329 | 1 | 312 | 5.6e-104 | 379.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35140.t1 | A0A072UP04 | 98.0 | 460 | 4 | 1 | 1 | 455 | 1 | 460 | 8.5e-247 | 862.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95472 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene04128 | PPI |
| MS.gene08073 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene030418 | PPI |
| MS.gene47513 | MS.gene35140 | PPI |
| MS.gene004705 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene39588 | PPI |
| MS.gene05721 | MS.gene35140 | PPI |
| MS.gene070323 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene26565 | PPI |
| MS.gene016898 | MS.gene35140 | PPI |
| MS.gene37608 | MS.gene35140 | PPI |
| MS.gene004704 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene048789 | PPI |
| MS.gene27709 | MS.gene35140 | PPI |
| MS.gene32092 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene83444 | PPI |
| MS.gene82426 | MS.gene35140 | PPI |
| MS.gene39781 | MS.gene35140 | PPI |
| MS.gene028153 | MS.gene35140 | PPI |
| MS.gene008730 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene32091 | PPI |
| MS.gene35140 | MS.gene95471 | PPI |
| MS.gene72768 | MS.gene35140 | PPI |
| MS.gene53789 | MS.gene35140 | PPI |
| MS.gene40019 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene52223 | PPI |
| MS.gene35140 | MS.gene47032 | PPI |
| MS.gene40020 | MS.gene35140 | PPI |
| MS.gene04368 | MS.gene35140 | PPI |
| MS.gene35140 | MS.gene023855 | PPI |
| MS.gene72163 | MS.gene35140 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35140.t1 | MTR_4g094615 | 98.043 | 460 | 4 | 1 | 1 | 455 | 1 | 460 | 0.0 | 920 |
| MS.gene35140.t1 | MTR_4g094615 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 758 |
| MS.gene35140.t1 | MTR_4g094615 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 758 |
| MS.gene35140.t1 | MTR_8g090145 | 68.715 | 179 | 41 | 3 | 284 | 455 | 24 | 194 | 1.13e-63 | 205 |
| MS.gene35140.t1 | MTR_4g087670 | 65.909 | 44 | 15 | 0 | 153 | 196 | 12 | 55 | 2.24e-14 | 68.2 |
| MS.gene35140.t1 | MTR_7g012400 | 24.590 | 305 | 186 | 10 | 81 | 346 | 107 | 406 | 5.91e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35140.t1 | AT3G51270 | 66.456 | 474 | 127 | 7 | 1 | 455 | 1 | 461 | 0.0 | 561 |
| MS.gene35140.t1 | AT3G51270 | 66.456 | 474 | 127 | 7 | 1 | 455 | 1 | 461 | 0.0 | 561 |
| MS.gene35140.t1 | AT3G51270 | 66.456 | 474 | 127 | 7 | 1 | 455 | 1 | 461 | 0.0 | 561 |
| MS.gene35140.t1 | AT3G51270 | 64.241 | 481 | 123 | 10 | 1 | 455 | 1 | 458 | 0.0 | 533 |
Find 84 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTCTTTGTGAGAATTCC+TGG | 0.205564 | 4.4:-19489714 | None:intergenic |
| GAACTTGCTGCTAGTGGTTT+TGG | 0.252937 | 4.4:+19488220 | MS.gene35140:CDS |
| GGTTCTCACCGCCGTTGAAT+TGG | 0.262655 | 4.4:+19484755 | MS.gene35140:CDS |
| AACATCGTAGTAGTTATAAT+TGG | 0.288616 | 4.4:+19485258 | MS.gene35140:CDS |
| CAATTATTGGTATAATTATT+CGG | 0.292933 | 4.4:+19486181 | MS.gene35140:CDS |
| ATCAAAACTATGGTCAATAA+AGG | 0.354092 | 4.4:+19484951 | MS.gene35140:CDS |
| GTTCTCACCGCCGTTGAATT+GGG | 0.377927 | 4.4:+19484756 | MS.gene35140:CDS |
| GCTCTTACATGTTTGCATTA+CGG | 0.386878 | 4.4:-19486440 | None:intergenic |
| CGTAGGGGACGGAAGAAACT+TGG | 0.423011 | 4.4:+19489689 | MS.gene35140:CDS |
| TGCTATAGCATCAGCTCGTA+GGG | 0.423360 | 4.4:+19489673 | MS.gene35140:CDS |
| CGATTATGTTCCACAGCCTC+TGG | 0.430757 | 4.4:-19485438 | None:intergenic |
| ATTTGATTTGCAGGAGGAAG+TGG | 0.434562 | 4.4:+19489604 | MS.gene35140:intron |
| ATTTATCTGCAGTTTATTGA+AGG | 0.437822 | 4.4:+19488344 | MS.gene35140:intron |
| GTCTCCGTTGGTCGCCAAAT+CGG | 0.440264 | 4.4:+19484981 | MS.gene35140:CDS |
| TGTTCCACAGCCTCTGGAAC+AGG | 0.441351 | 4.4:-19485432 | None:intergenic |
| GTTCTGCAAATGCAGCGTTC+AGG | 0.447538 | 4.4:+19486122 | MS.gene35140:intron |
| TTCTTTACATTTGTCAGAGC+AGG | 0.450728 | 4.4:+19488451 | MS.gene35140:CDS |
| TTTCAATGAATTTAACATCA+TGG | 0.456130 | 4.4:+19486233 | MS.gene35140:CDS |
| ATCGGCGTTGGAAAAGAATC+TGG | 0.462402 | 4.4:+19484999 | MS.gene35140:CDS |
| TTTGAGGTTGCTGATGAAGA+TGG | 0.478832 | 4.4:+19485158 | MS.gene35140:CDS |
| GATAACGACGATTCTAATGA+AGG | 0.490096 | 4.4:+19488133 | MS.gene35140:CDS |
| TGAAAACAGCGGATCTGAAA+AGG | 0.494830 | 4.4:+19489321 | MS.gene35140:CDS |
| TAAAGAATTTGCTTTCATGA+AGG | 0.495198 | 4.4:+19485307 | MS.gene35140:CDS |
| TTCAAATGCAAATGAGCAGC+TGG | 0.501357 | 4.4:+19489765 | MS.gene35140:CDS |
| TATTGGTATAATTATTCGGC+TGG | 0.504156 | 4.4:+19486185 | MS.gene35140:CDS |
| TCTTCAATAGACAGCAGTGC+TGG | 0.505671 | 4.4:+19488184 | MS.gene35140:CDS |
| AATGAAGGGAGAGAGGAAGC+TGG | 0.509645 | 4.4:+19488148 | MS.gene35140:CDS |
| AATCATAACCAAGGTAGGTA+AGG | 0.513088 | 4.4:-19484920 | None:intergenic |
| GACGGAAGAAACTTGGATCC+AGG | 0.515564 | 4.4:+19489696 | MS.gene35140:CDS |
| GTTCAGCGGGGACAATTTCG+TGG | 0.518585 | 4.4:-19484788 | None:intergenic |
| TTTGATTTGCAGGAGGAAGT+GGG | 0.518753 | 4.4:+19489605 | MS.gene35140:intron |
| CATGTTTGAGACGAGCGATT+CGG | 0.519870 | 4.4:-19484818 | None:intergenic |
| GTGCTATAGCATCAGCTCGT+AGG | 0.522126 | 4.4:+19489672 | MS.gene35140:CDS |
| GTTTCTCATGCCCAATTCAA+CGG | 0.522663 | 4.4:-19484766 | None:intergenic |
| ATTTCCTGTTCCAGAGGCTG+TGG | 0.524597 | 4.4:+19485428 | MS.gene35140:CDS |
| TTATGGCTATGAAGTTACAT+AGG | 0.526717 | 4.4:+19485186 | MS.gene35140:CDS |
| AAAGAGGAGAGATTTGAAGA+AGG | 0.528471 | 4.4:+19489298 | MS.gene35140:CDS |
| TGAAACCATGTTTAGGATGA+GGG | 0.529887 | 4.4:+19489259 | MS.gene35140:intron |
| CAAACATGGTGGCACCTACA+AGG | 0.530222 | 4.4:+19484833 | MS.gene35140:CDS |
| GGATTTCGCCTTACCTACCT+TGG | 0.531140 | 4.4:+19484912 | MS.gene35140:CDS |
| AAGAAAATCATAACCAAGGT+AGG | 0.534589 | 4.4:-19484925 | None:intergenic |
| AAGATGAGGAAGATATTCAA+AGG | 0.538915 | 4.4:+19488248 | MS.gene35140:CDS |
| TGATTTGCTAGATATATTTG+AGG | 0.539655 | 4.4:+19485142 | MS.gene35140:intron |
| GATAAGGAACTTGCTGCTAG+TGG | 0.544498 | 4.4:+19488214 | MS.gene35140:CDS |
| TGCGACACAGACACCATTTG+CGG | 0.549608 | 4.4:-19486417 | None:intergenic |
| ATTCGGTCGATAAGTTCAGC+GGG | 0.550067 | 4.4:-19484801 | None:intergenic |
| GCTATGAAGTTACATAGGCT+TGG | 0.554098 | 4.4:+19485191 | MS.gene35140:CDS |
| ACATGAAAGCCATGGAAAAG+AGG | 0.555703 | 4.4:+19489282 | MS.gene35140:CDS |
| AAAGGTGTCTTCGTCTCCGT+TGG | 0.561674 | 4.4:+19484969 | MS.gene35140:CDS |
| ACAAATTCTGATAGTGAAGA+TGG | 0.564391 | 4.4:+19488383 | MS.gene35140:CDS |
| GTTGGTCGCCAAATCGGCGT+TGG | 0.564870 | 4.4:+19484987 | MS.gene35140:CDS |
| CAGCGGATCTGAAAAGGTAG+AGG | 0.569687 | 4.4:+19489327 | MS.gene35140:CDS |
| ATGAAGGGAGAGAGGAAGCT+GGG | 0.571132 | 4.4:+19488149 | MS.gene35140:CDS |
| AGATGAGGAAGATATTCAAA+GGG | 0.572279 | 4.4:+19488249 | MS.gene35140:CDS |
| CGAATCGCTCGTCTCAAACA+TGG | 0.579259 | 4.4:+19484819 | MS.gene35140:CDS |
| GTAATCATGTCGCTTGTCCA+AGG | 0.582155 | 4.4:+19485468 | MS.gene35140:CDS |
| AACGCCGATTTGGCGACCAA+CGG | 0.583074 | 4.4:-19484985 | None:intergenic |
| GATCAGGCTTTGCAAACACA+TGG | 0.584897 | 4.4:+19485405 | MS.gene35140:intron |
| TAGCATCAGCTCGTAGGGGA+CGG | 0.585566 | 4.4:+19489678 | MS.gene35140:CDS |
| CAAATTCTTTAAGCGCAGCA+AGG | 0.587058 | 4.4:-19485295 | None:intergenic |
| ATTATTCGGCTGGCAGAACA+TGG | 0.588090 | 4.4:+19486195 | MS.gene35140:CDS |
| CAGGAATTCTCACAAAGACA+AGG | 0.593405 | 4.4:+19489715 | MS.gene35140:CDS |
| TAGGTCATCTCAAAATGCTA+AGG | 0.601055 | 4.4:+19489742 | MS.gene35140:CDS |
| GCACTTACAGAGGATAACCT+TGG | 0.602178 | 4.4:-19485485 | None:intergenic |
| CGATTCTAATGAAGGGAGAG+AGG | 0.607327 | 4.4:+19488141 | MS.gene35140:CDS |
| CCCTAAAATCATCTTTCGAG+AGG | 0.609662 | 4.4:-19484734 | None:intergenic |
| GATGAGGGACATGAAAGCCA+TGG | 0.610793 | 4.4:+19489274 | MS.gene35140:CDS |
| ACATGGATTTCCTGTTCCAG+AGG | 0.611150 | 4.4:+19485422 | MS.gene35140:CDS |
| ATAACGACGATTCTAATGAA+GGG | 0.618074 | 4.4:+19488134 | MS.gene35140:CDS |
| TCTGCAGTTTATTGAAGGCG+AGG | 0.623489 | 4.4:+19488349 | MS.gene35140:intron |
| GCAGTTTATTGAAGGCGAGG+TGG | 0.636859 | 4.4:+19488352 | MS.gene35140:intron |
| CACGACTCTACTAAATACGA+TGG | 0.637122 | 4.4:+19484891 | MS.gene35140:CDS |
| AAAGGTAGAGGCAAGCGACA+CGG | 0.642855 | 4.4:+19489339 | MS.gene35140:CDS |
| CTCACAAAGACAAGGGTGGT+AGG | 0.646398 | 4.4:+19489723 | MS.gene35140:CDS |
| TGATAGTGAAGATGGTGACT+TGG | 0.646642 | 4.4:+19488391 | MS.gene35140:CDS |
| TGGCAAGAAAATCATAACCA+AGG | 0.675307 | 4.4:-19484929 | None:intergenic |
| GATTCGGTCGATAAGTTCAG+CGG | 0.686973 | 4.4:-19484802 | None:intergenic |
| TCTCATGCCCAATTCAACGG+CGG | 0.688093 | 4.4:-19484763 | None:intergenic |
| AGGAATTCTCACAAAGACAA+GGG | 0.690996 | 4.4:+19489716 | MS.gene35140:CDS |
| TTTGAAGAAGGTGAAAACAG+CGG | 0.711922 | 4.4:+19489310 | MS.gene35140:CDS |
| AATTCTCACAAAGACAAGGG+TGG | 0.720526 | 4.4:+19489719 | MS.gene35140:CDS |
| ATCGCTCGTCTCAAACATGG+TGG | 0.722151 | 4.4:+19484822 | MS.gene35140:CDS |
| GCTATAGCATCAGCTCGTAG+GGG | 0.722557 | 4.4:+19489674 | MS.gene35140:CDS |
| TTCGGTCGATAAGTTCAGCG+GGG | 0.752441 | 4.4:-19484800 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATTTCGTAATTTAATT+AGG | - | chr4.4:19485883-19485902 | None:intergenic | 10.0% |
| !!! | GTTTATTGTTAAATTATTTT+CGG | + | chr4.4:19487225-19487244 | MS.gene35140:intron | 10.0% |
| !! | AAAATATCTATAAATCTCTT+AGG | - | chr4.4:19485933-19485952 | None:intergenic | 15.0% |
| !! | AAAGAAATATAAAACAATAG+TGG | + | chr4.4:19488590-19488609 | MS.gene35140:intron | 15.0% |
| !! | AAATCAAATTAATACCATTA+TGG | - | chr4.4:19489593-19489612 | None:intergenic | 15.0% |
| !! | ATAATAATGATATTATGTGT+TGG | - | chr4.4:19486805-19486824 | None:intergenic | 15.0% |
| !! | CAATTATTGGTATAATTATT+CGG | + | chr4.4:19486181-19486200 | MS.gene35140:CDS | 15.0% |
| !! | GAAAATTAATTAACTACAAA+AGG | + | chr4.4:19488722-19488741 | MS.gene35140:intron | 15.0% |
| !! | TAATAATGATATTATGTGTT+GGG | - | chr4.4:19486804-19486823 | None:intergenic | 15.0% |
| !! | TCAATTAGAATTGTAATATA+CGG | - | chr4.4:19489228-19489247 | None:intergenic | 15.0% |
| !! | TTTATATGAAAAAACCATAA+TGG | + | chr4.4:19489576-19489595 | MS.gene35140:intron | 15.0% |
| !!! | AACTTTTTATTGAGTTTAAT+TGG | + | chr4.4:19486665-19486684 | MS.gene35140:intron | 15.0% |
| !!! | TCAACTAATATATTTTTGTT+AGG | + | chr4.4:19486829-19486848 | MS.gene35140:intron | 15.0% |
| !!! | TTAACTTATTGAAAGATTTT+GGG | + | chr4.4:19488021-19488040 | MS.gene35140:intron | 15.0% |
| !!! | TTATTTTGATGAATTTAGTT+AGG | + | chr4.4:19488550-19488569 | MS.gene35140:intron | 15.0% |
| !! | AATGCATTATAACTAAGAAA+AGG | - | chr4.4:19488291-19488310 | None:intergenic | 20.0% |
| !! | AGGATAGAGTTTAAATATTA+TGG | + | chr4.4:19485964-19485983 | MS.gene35140:intron | 20.0% |
| !! | ATGAGAAATAACATAGATTT+CGG | + | chr4.4:19485764-19485783 | MS.gene35140:intron | 20.0% |
| !! | CATTTCAAAATTAAGGAATT+TGG | + | chr4.4:19487009-19487028 | MS.gene35140:intron | 20.0% |
| !! | GATAAATTTGAAGATATTTG+AGG | - | chr4.4:19488331-19488350 | None:intergenic | 20.0% |
| !! | GGATAGAGTTTAAATATTAT+GGG | + | chr4.4:19485965-19485984 | MS.gene35140:intron | 20.0% |
| !! | TGTTATATTAGAAGAATCAA+GGG | - | chr4.4:19488679-19488698 | None:intergenic | 20.0% |
| !! | TTAGTTAAGTAGTAATGTTA+AGG | + | chr4.4:19487053-19487072 | MS.gene35140:intron | 20.0% |
| !! | TTTCAATGAATTTAACATCA+TGG | + | chr4.4:19486233-19486252 | MS.gene35140:CDS | 20.0% |
| !!! | AAAATTAAGGAATTTGGAAT+TGG | + | chr4.4:19487015-19487034 | MS.gene35140:intron | 20.0% |
| !!! | AAATTAAGGAATTTGGAATT+GGG | + | chr4.4:19487016-19487035 | MS.gene35140:intron | 20.0% |
| !!! | AGATATTTTGAATTACTCTA+AGG | + | chr4.4:19485944-19485963 | MS.gene35140:intron | 20.0% |
| !!! | AGCAATCAATTTTTTGATTT+TGG | + | chr4.4:19487394-19487413 | MS.gene35140:intron | 20.0% |
| !!! | CTTAACTTATTGAAAGATTT+TGG | + | chr4.4:19488020-19488039 | MS.gene35140:intron | 20.0% |
| !!! | TTATTTCTAGAAAATATCAC+AGG | - | chr4.4:19487447-19487466 | None:intergenic | 20.0% |
| !!! | TTCTTCATGATGAATTTTTT+GGG | + | chr4.4:19489418-19489437 | MS.gene35140:intron | 20.0% |
| ! | AAAAATTGATTGCTCAACAA+AGG | - | chr4.4:19487388-19487407 | None:intergenic | 25.0% |
| ! | AAAATTGATTGCTCAACAAA+GGG | - | chr4.4:19487387-19487406 | None:intergenic | 25.0% |
| ! | AACATCGTAGTAGTTATAAT+TGG | + | chr4.4:19485258-19485277 | MS.gene35140:CDS | 25.0% |
| ! | AGAGATAGCAAATAGAAAAT+GGG | - | chr4.4:19487852-19487871 | None:intergenic | 25.0% |
| ! | ATAATTGCTAAGTACTCTTA+GGG | + | chr4.4:19485614-19485633 | MS.gene35140:intron | 25.0% |
| ! | ATATCACAGGACAAAAATTA+AGG | - | chr4.4:19487434-19487453 | None:intergenic | 25.0% |
| ! | ATCAAAACTATGGTCAATAA+AGG | + | chr4.4:19484951-19484970 | MS.gene35140:CDS | 25.0% |
| ! | ATTTATCTGCAGTTTATTGA+AGG | + | chr4.4:19488344-19488363 | MS.gene35140:intron | 25.0% |
| ! | CAAACAAAAGATAGAAAATG+AGG | - | chr4.4:19486573-19486592 | None:intergenic | 25.0% |
| ! | CAAGGAAAGATTATAAGTTA+AGG | - | chr4.4:19486855-19486874 | None:intergenic | 25.0% |
| ! | CAATATACTAATAGTGTGTA+TGG | - | chr4.4:19487962-19487981 | None:intergenic | 25.0% |
| ! | CATCATATCTTAAATTTCTG+TGG | - | chr4.4:19486611-19486630 | None:intergenic | 25.0% |
| ! | GAAAAAAACCAGAATTTGAA+GGG | - | chr4.4:19486489-19486508 | None:intergenic | 25.0% |
| ! | GTGTTATATTAGAAGAATCA+AGG | - | chr4.4:19488680-19488699 | None:intergenic | 25.0% |
| ! | TATAATTGCTAAGTACTCTT+AGG | + | chr4.4:19485613-19485632 | MS.gene35140:intron | 25.0% |
| ! | TATCAATGTTTGAATTCCTA+GGG | - | chr4.4:19487543-19487562 | None:intergenic | 25.0% |
| ! | TATCACAGGACAAAAATTAA+GGG | - | chr4.4:19487433-19487452 | None:intergenic | 25.0% |
| ! | TCAAACATAAAAGTCGTTTA+GGG | + | chr4.4:19485524-19485543 | MS.gene35140:intron | 25.0% |
| ! | TGATGAAGATGGAAAAATTA+TGG | + | chr4.4:19485169-19485188 | MS.gene35140:CDS | 25.0% |
| ! | TTAAGATTAAGAGTTGAGTA+AGG | - | chr4.4:19485829-19485848 | None:intergenic | 25.0% |
| ! | TTCAAACATAAAAGTCGTTT+AGG | + | chr4.4:19485523-19485542 | MS.gene35140:intron | 25.0% |
| ! | TTGTTAATGAAACCATGTTT+AGG | + | chr4.4:19489252-19489271 | MS.gene35140:intron | 25.0% |
| !! | AATTAAGGAATTTGGAATTG+GGG | + | chr4.4:19487017-19487036 | MS.gene35140:intron | 25.0% |
| !! | GATTTGATCCTAATTTTCTA+TGG | + | chr4.4:19487655-19487674 | MS.gene35140:intron | 25.0% |
| !! | GCATAATTAAAGAAGGTTTT+GGG | + | chr4.4:19488964-19488983 | MS.gene35140:intron | 25.0% |
| !! | GGTGTTACATTTCAAAATTA+AGG | + | chr4.4:19487002-19487021 | MS.gene35140:intron | 25.0% |
| !! | TAAAGAATTTGCTTTCATGA+AGG | + | chr4.4:19485307-19485326 | MS.gene35140:CDS | 25.0% |
| !! | TTATAATCTTTCCTTGTTTC+AGG | + | chr4.4:19486859-19486878 | MS.gene35140:intron | 25.0% |
| !! | TTTTGATGAATTTAGTTAGG+AGG | + | chr4.4:19488553-19488572 | MS.gene35140:intron | 25.0% |
| !!! | ACAGTTTTTGAGACAATTAT+TGG | + | chr4.4:19486168-19486187 | MS.gene35140:CDS | 25.0% |
| !!! | ATGGTATTAATTTGATTTGC+AGG | + | chr4.4:19489595-19489614 | MS.gene35140:intron | 25.0% |
| !!! | ATTTAAAGTTTTCATTGCAC+TGG | + | chr4.4:19489061-19489080 | MS.gene35140:intron | 25.0% |
| !!! | CTTCTTCATGATGAATTTTT+TGG | + | chr4.4:19489417-19489436 | MS.gene35140:intron | 25.0% |
| !!! | GTTATTTTGACATTATGTGT+TGG | + | chr4.4:19486936-19486955 | MS.gene35140:intron | 25.0% |
| !!! | TCATTACATGTCATTTTTTG+TGG | + | chr4.4:19486318-19486337 | MS.gene35140:intron | 25.0% |
| !!! | TGATTTGCTAGATATATTTG+AGG | + | chr4.4:19485142-19485161 | MS.gene35140:intron | 25.0% |
| !!! | TTTATTGACCATAGTTTTGA+TGG | - | chr4.4:19484952-19484971 | None:intergenic | 25.0% |
| AACAATTCAAGTACATAGCT+AGG | - | chr4.4:19485346-19485365 | None:intergenic | 30.0% | |
| AAGAAAATCATAACCAAGGT+AGG | - | chr4.4:19484928-19484947 | None:intergenic | 30.0% | |
| AAGATCTTAACATGCAAAAC+AGG | - | chr4.4:19487591-19487610 | None:intergenic | 30.0% | |
| AAGATGAGGAAGATATTCAA+AGG | + | chr4.4:19488248-19488267 | MS.gene35140:CDS | 30.0% | |
| AATGCAGAACAAACATTAGA+CGG | - | chr4.4:19487150-19487169 | None:intergenic | 30.0% | |
| ACAATTCAAGTACATAGCTA+GGG | - | chr4.4:19485345-19485364 | None:intergenic | 30.0% | |
| ACAGATCTTAGATAAACTAC+AGG | - | chr4.4:19489153-19489172 | None:intergenic | 30.0% | |
| AGATGAGGAAGATATTCAAA+GGG | + | chr4.4:19488249-19488268 | MS.gene35140:CDS | 30.0% | |
| AGCATTTGCCATAGAAAATT+AGG | - | chr4.4:19487666-19487685 | None:intergenic | 30.0% | |
| ATAACATAGATTTCGGATTG+TGG | + | chr4.4:19485771-19485790 | MS.gene35140:intron | 30.0% | |
| ATAACGACGATTCTAATGAA+GGG | + | chr4.4:19488134-19488153 | MS.gene35140:CDS | 30.0% | |
| ATTGCTTGAATTTGTATGCT+TGG | + | chr4.4:19486100-19486119 | MS.gene35140:intron | 30.0% | |
| ATTGGTATTACATTAGTACC+AGG | + | chr4.4:19485673-19485692 | MS.gene35140:intron | 30.0% | |
| CAAAACCAGTGTAAAATATG+TGG | - | chr4.4:19486073-19486092 | None:intergenic | 30.0% | |
| CAAATCAAGTAGCATGAAAA+AGG | - | chr4.4:19487641-19487660 | None:intergenic | 30.0% | |
| CAGAGATAGCAAATAGAAAA+TGG | - | chr4.4:19487853-19487872 | None:intergenic | 30.0% | |
| CTAATGTTTGTTCTGCATTA+AGG | + | chr4.4:19487151-19487170 | MS.gene35140:intron | 30.0% | |
| CTCTAATAAGGATACCAATA+GGG | - | chr4.4:19488907-19488926 | None:intergenic | 30.0% | |
| GGAAAAAAACCAGAATTTGA+AGG | - | chr4.4:19486490-19486509 | None:intergenic | 30.0% | |
| GGACAACAAACATAAAACAA+CGG | + | chr4.4:19488771-19488790 | MS.gene35140:intron | 30.0% | |
| GGGTCTATTATTCTCTAATA+AGG | - | chr4.4:19488919-19488938 | None:intergenic | 30.0% | |
| GTATCAATGTTTGAATTCCT+AGG | - | chr4.4:19487544-19487563 | None:intergenic | 30.0% | |
| GTATGACAACAAAAAGCTAA+TGG | - | chr4.4:19488485-19488504 | None:intergenic | 30.0% | |
| TAATTATGCCGTGTCATATT+CGG | - | chr4.4:19488953-19488972 | None:intergenic | 30.0% | |
| TATTATGTCCCTTCAAATTC+TGG | + | chr4.4:19486478-19486497 | MS.gene35140:intron | 30.0% | |
| TATTGGTATAATTATTCGGC+TGG | + | chr4.4:19486185-19486204 | MS.gene35140:CDS | 30.0% | |
| TCATACAAGCATGAAATCAA+AGG | - | chr4.4:19486511-19486530 | None:intergenic | 30.0% | |
| TCTCTAATAAGGATACCAAT+AGG | - | chr4.4:19488908-19488927 | None:intergenic | 30.0% | |
| TGAACCTAAAACAGAAAAGA+GGG | - | chr4.4:19488087-19488106 | None:intergenic | 30.0% | |
| TGATATTCTAAGTGAACTGT+GGG | + | chr4.4:19489111-19489130 | MS.gene35140:intron | 30.0% | |
| TGCATGTTAAGATCTTTGAT+AGG | + | chr4.4:19487595-19487614 | MS.gene35140:intron | 30.0% | |
| TGTTGTCATACAAGATATAC+TGG | + | chr4.4:19488494-19488513 | MS.gene35140:intron | 30.0% | |
| TTATGGCTATGAAGTTACAT+AGG | + | chr4.4:19485186-19485205 | MS.gene35140:CDS | 30.0% | |
| TTGAACCTAAAACAGAAAAG+AGG | - | chr4.4:19488088-19488107 | None:intergenic | 30.0% | |
| TTTACAGCATTCCTTGTTAA+CGG | - | chr4.4:19489457-19489476 | None:intergenic | 30.0% | |
| TTTGTATAACATTTGACGCA+TGG | + | chr4.4:19485643-19485662 | MS.gene35140:intron | 30.0% | |
| ! | ACAAATTCTGATAGTGAAGA+TGG | + | chr4.4:19488383-19488402 | MS.gene35140:CDS | 30.0% |
| ! | ATACAAGATATACTGGCTAT+GGG | + | chr4.4:19488501-19488520 | MS.gene35140:intron | 30.0% |
| ! | ATCCAATTGCATTTTCATCT+TGG | - | chr4.4:19489484-19489503 | None:intergenic | 30.0% |
| ! | ATTAAGGAATTTGGAATTGG+GGG | + | chr4.4:19487018-19487037 | MS.gene35140:intron | 30.0% |
| ! | GGCATAATTAAAGAAGGTTT+TGG | + | chr4.4:19488963-19488982 | MS.gene35140:intron | 30.0% |
| ! | GTTTGAAACAACACGAAAAA+GGG | - | chr4.4:19485510-19485529 | None:intergenic | 30.0% |
| ! | TCCAATTGCATTTTCATCTT+GGG | - | chr4.4:19489483-19489502 | None:intergenic | 30.0% |
| ! | TGTTTGAAACAACACGAAAA+AGG | - | chr4.4:19485511-19485530 | None:intergenic | 30.0% |
| ! | TTCCTTATCTAAAACGAACA+AGG | - | chr4.4:19485739-19485758 | None:intergenic | 30.0% |
| ! | TTTTCTTGCCATCAAAACTA+TGG | + | chr4.4:19484941-19484960 | MS.gene35140:CDS | 30.0% |
| !! | ATGTTTGTTGTCCTGTAAAT+GGG | - | chr4.4:19488764-19488783 | None:intergenic | 30.0% |
| !! | GTATTAATTTGATTTGCAGG+AGG | + | chr4.4:19489598-19489617 | MS.gene35140:intron | 30.0% |
| !! | TATGTTTGTTGTCCTGTAAA+TGG | - | chr4.4:19488765-19488784 | None:intergenic | 30.0% |
| !! | TCTTCAAGTTTTTCAGAAAG+AGG | + | chr4.4:19486907-19486926 | MS.gene35140:CDS | 30.0% |
| !! | TTGTTCTTAAGCTTGCTTTT+TGG | + | chr4.4:19486014-19486033 | MS.gene35140:intron | 30.0% |
| !! | TTTCTATTTGCTATCTCTGA+TGG | + | chr4.4:19487854-19487873 | MS.gene35140:intron | 30.0% |
| !!! | AAAGATTTTGGGTTTGTCTT+TGG | + | chr4.4:19488032-19488051 | MS.gene35140:intron | 30.0% |
| !!! | CACATATTTTACACTGGTTT+TGG | + | chr4.4:19486071-19486090 | MS.gene35140:intron | 30.0% |
| !!! | TGGTTTTGGTAAAAAAGATG+AGG | + | chr4.4:19488234-19488253 | MS.gene35140:CDS | 30.0% |
| AAAATTAAGGGACAAGACAC+AGG | - | chr4.4:19487421-19487440 | None:intergenic | 35.0% | |
| AAAGAGGAGAGATTTGAAGA+AGG | + | chr4.4:19489298-19489317 | MS.gene35140:CDS | 35.0% | |
| AACAAACAGACTCATCTGTT+AGG | + | chr4.4:19488626-19488645 | MS.gene35140:intron | 35.0% | |
| AAGGATAGACACAGGAATAT+AGG | + | chr4.4:19487170-19487189 | MS.gene35140:intron | 35.0% | |
| AAGGGACATAATACCATACA+AGG | - | chr4.4:19486471-19486490 | None:intergenic | 35.0% | |
| AATCATAACCAAGGTAGGTA+AGG | - | chr4.4:19484923-19484942 | None:intergenic | 35.0% | |
| AATTGGTACGTAGTATGTAC+TGG | + | chr4.4:19486682-19486701 | MS.gene35140:intron | 35.0% | |
| ACAAACAGACTCATCTGTTA+GGG | + | chr4.4:19488627-19488646 | MS.gene35140:intron | 35.0% | |
| ACCAGTGTAAAATATGTGGA+AGG | - | chr4.4:19486069-19486088 | None:intergenic | 35.0% | |
| AGAGAATAATAGACCCAATC+CGG | + | chr4.4:19488923-19488942 | MS.gene35140:intron | 35.0% | |
| AGGAAGATATTCAAAGGGTA+TGG | + | chr4.4:19488254-19488273 | MS.gene35140:intron | 35.0% | |
| AGGAATTCTCACAAAGACAA+GGG | + | chr4.4:19489716-19489735 | MS.gene35140:CDS | 35.0% | |
| AGTCAACTGCTAGATATGTA+AGG | - | chr4.4:19487079-19487098 | None:intergenic | 35.0% | |
| ATAAAGCCTAGAAAGCAAGT+TGG | - | chr4.4:19489033-19489052 | None:intergenic | 35.0% | |
| ATTGTCTCAAAAACTGTCTC+TGG | - | chr4.4:19486165-19486184 | None:intergenic | 35.0% | |
| CAAAATGAGCAACTTTGCAT+TGG | - | chr4.4:19487789-19487808 | None:intergenic | 35.0% | |
| CAAAGTTCAAACCCATTTAC+AGG | + | chr4.4:19488750-19488769 | MS.gene35140:intron | 35.0% | |
| CCAGTGTAAAATATGTGGAA+GGG | - | chr4.4:19486068-19486087 | None:intergenic | 35.0% | |
| GATAACGACGATTCTAATGA+AGG | + | chr4.4:19488133-19488152 | MS.gene35140:CDS | 35.0% | |
| GCTCTTACATGTTTGCATTA+CGG | - | chr4.4:19486443-19486462 | None:intergenic | 35.0% | |
| GGACAAATTATCAAGACAAC+TGG | - | chr4.4:19488066-19488085 | None:intergenic | 35.0% | |
| GGATTGTATATCTAGGCTTT+AGG | - | chr4.4:19488802-19488821 | None:intergenic | 35.0% | |
| GTGATATTCTAAGTGAACTG+TGG | + | chr4.4:19489110-19489129 | MS.gene35140:intron | 35.0% | |
| TAGGTCATCTCAAAATGCTA+AGG | + | chr4.4:19489742-19489761 | MS.gene35140:CDS | 35.0% | |
| TGACACGGCATAATTAAAGA+AGG | + | chr4.4:19488957-19488976 | MS.gene35140:intron | 35.0% | |
| TGGCAAGAAAATCATAACCA+AGG | - | chr4.4:19484932-19484951 | None:intergenic | 35.0% | |
| TTACAGCATTCCTTGTTAAC+GGG | - | chr4.4:19489456-19489475 | None:intergenic | 35.0% | |
| TTCTTTACATTTGTCAGAGC+AGG | + | chr4.4:19488451-19488470 | MS.gene35140:CDS | 35.0% | |
| TTGTCTCAAAAACTGTCTCT+GGG | - | chr4.4:19486164-19486183 | None:intergenic | 35.0% | |
| TTTCTTCATCGTCAATCTAC+AGG | - | chr4.4:19486377-19486396 | None:intergenic | 35.0% | |
| TTTGAAGAAGGTGAAAACAG+CGG | + | chr4.4:19489310-19489329 | MS.gene35140:CDS | 35.0% | |
| TTTGCTTAGGACATTAGTGT+TGG | + | chr4.4:19488989-19489008 | MS.gene35140:intron | 35.0% | |
| ! | AAGATATTCAAAGGGTATGG+TGG | + | chr4.4:19488257-19488276 | MS.gene35140:intron | 35.0% |
| ! | AAGATTAGTCAACTCTCTGA+TGG | + | chr4.4:19485572-19485591 | MS.gene35140:intron | 35.0% |
| ! | ACATTAGTGTTGGAGAACTT+AGG | + | chr4.4:19488999-19489018 | MS.gene35140:intron | 35.0% |
| ! | ACCTCTCGAAAGATGATTTT+AGG | + | chr4.4:19484733-19484752 | MS.gene35140:CDS | 35.0% |
| ! | ATGAAACCATGTTTAGGATG+AGG | + | chr4.4:19489258-19489277 | MS.gene35140:intron | 35.0% |
| ! | CAATGCAAAGTTGCTCATTT+TGG | + | chr4.4:19487787-19487806 | MS.gene35140:intron | 35.0% |
| ! | CATACAAGATATACTGGCTA+TGG | + | chr4.4:19488500-19488519 | MS.gene35140:intron | 35.0% |
| ! | CCAATTGCATTTTCATCTTG+GGG | - | chr4.4:19489482-19489501 | None:intergenic | 35.0% |
| ! | CCTCTCGAAAGATGATTTTA+GGG | + | chr4.4:19484734-19484753 | MS.gene35140:CDS | 35.0% |
| ! | GAGAACTGTTTGAGTTATCT+GGG | - | chr4.4:19487365-19487384 | None:intergenic | 35.0% |
| ! | TGAAACCATGTTTAGGATGA+GGG | + | chr4.4:19489259-19489278 | MS.gene35140:intron | 35.0% |
| ! | TTGTCCCTCTTTTCTGTTTT+AGG | + | chr4.4:19488080-19488099 | MS.gene35140:intron | 35.0% |
| !! | ATGTTTTAAGTAGTCACGCT+TGG | - | chr4.4:19485243-19485262 | None:intergenic | 35.0% |
| !! | CAAGTTTTTCAGAACCTTGT+AGG | - | chr4.4:19484850-19484869 | None:intergenic | 35.0% |
| !! | CACCTTGTTCGTTTTAGATA+AGG | + | chr4.4:19485734-19485753 | MS.gene35140:intron | 35.0% |
| !! | TGTGATTGATTTTCCGCAAA+TGG | + | chr4.4:19486404-19486423 | MS.gene35140:CDS | 35.0% |
| !! | TTGTATATCTAGGCTTTAGG+TGG | - | chr4.4:19488799-19488818 | None:intergenic | 35.0% |
| !!! | AAGGTTTTGGGTATTTGCTT+AGG | + | chr4.4:19488976-19488995 | MS.gene35140:intron | 35.0% |
| !!! | CTTAAGCTTGCTTTTTGGTT+TGG | + | chr4.4:19486019-19486038 | MS.gene35140:intron | 35.0% |
| !!! | TTTTTTGTGGCTTTTACCTC+TGG | + | chr4.4:19486331-19486350 | MS.gene35140:intron | 35.0% |
| AAGAGTTGAGTAAGGCTTAG+TGG | - | chr4.4:19485821-19485840 | None:intergenic | 40.0% | |
| AATTCCTAGGGATAAGACAC+AGG | - | chr4.4:19487531-19487550 | None:intergenic | 40.0% | |
| AATTCTCACAAAGACAAGGG+TGG | + | chr4.4:19489719-19489738 | MS.gene35140:CDS | 40.0% | |
| ACATGAAAGCCATGGAAAAG+AGG | + | chr4.4:19489282-19489301 | MS.gene35140:CDS | 40.0% | |
| ACGAACAAGGTGTAAAAGCA+AGG | - | chr4.4:19485726-19485745 | None:intergenic | 40.0% | |
| ACTCGCTGGATTGTATATCT+AGG | - | chr4.4:19488809-19488828 | None:intergenic | 40.0% | |
| ACTGGATGTGAGATTAAGTG+TGG | + | chr4.4:19489079-19489098 | MS.gene35140:intron | 40.0% | |
| ACTTCATCCTAGTTTCGTCT+TGG | - | chr4.4:19488872-19488891 | None:intergenic | 40.0% | |
| AGAGTTAGATTGTAAGCCAG+AGG | - | chr4.4:19486350-19486369 | None:intergenic | 40.0% | |
| ATTCCTTAACATGTGCCCTT+AGG | + | chr4.4:19487810-19487829 | MS.gene35140:intron | 40.0% | |
| ATTCCTTGTTAACGGGGATA+CGG | - | chr4.4:19489449-19489468 | None:intergenic | 40.0% | |
| CAAACAGACTCATCTGTTAG+GGG | + | chr4.4:19488628-19488647 | MS.gene35140:intron | 40.0% | |
| CAAATTCTTTAAGCGCAGCA+AGG | - | chr4.4:19485298-19485317 | None:intergenic | 40.0% | |
| CAAGTAGCATGAAAAAGGCA+AGG | - | chr4.4:19487636-19487655 | None:intergenic | 40.0% | |
| CACGACTCTACTAAATACGA+TGG | + | chr4.4:19484891-19484910 | MS.gene35140:CDS | 40.0% | |
| CAGGAATTCTCACAAAGACA+AGG | + | chr4.4:19489715-19489734 | MS.gene35140:CDS | 40.0% | |
| CCCCAAGATGAAAATGCAAT+TGG | + | chr4.4:19489479-19489498 | MS.gene35140:intron | 40.0% | |
| CCCTAAAATCATCTTTCGAG+AGG | - | chr4.4:19484737-19484756 | None:intergenic | 40.0% | |
| CGAACAAGGTGTAAAAGCAA+GGG | - | chr4.4:19485725-19485744 | None:intergenic | 40.0% | |
| CTGGATGTGAGATTAAGTGT+GGG | + | chr4.4:19489080-19489099 | MS.gene35140:intron | 40.0% | |
| CTTGTCTTTGTGAGAATTCC+TGG | - | chr4.4:19489717-19489736 | None:intergenic | 40.0% | |
| GACATGTTCTTTGCTTGATC+AGG | + | chr4.4:19485389-19485408 | MS.gene35140:intron | 40.0% | |
| GCTATGAAGTTACATAGGCT+TGG | + | chr4.4:19485191-19485210 | MS.gene35140:CDS | 40.0% | |
| GTAAAATATGTGGAAGGGAG+TGG | - | chr4.4:19486063-19486082 | None:intergenic | 40.0% | |
| GTAAGAGCTTCTTCCTTGTA+TGG | + | chr4.4:19486455-19486474 | MS.gene35140:intron | 40.0% | |
| GTCAAAAAGCTCATCCCTAT+TGG | + | chr4.4:19488890-19488909 | MS.gene35140:intron | 40.0% | |
| GTTTCTCATGCCCAATTCAA+CGG | - | chr4.4:19484769-19484788 | None:intergenic | 40.0% | |
| TACAGCATTCCTTGTTAACG+GGG | - | chr4.4:19489455-19489474 | None:intergenic | 40.0% | |
| TCTGCATTAAGGATAGACAC+AGG | + | chr4.4:19487162-19487181 | MS.gene35140:intron | 40.0% | |
| TGAAAACAGCGGATCTGAAA+AGG | + | chr4.4:19489321-19489340 | MS.gene35140:CDS | 40.0% | |
| TGTAAAAGCAAGGGACAGAA+TGG | - | chr4.4:19485716-19485735 | None:intergenic | 40.0% | |
| TGTTCGTGAATTTCACTGCT+TGG | + | chr4.4:19486959-19486978 | MS.gene35140:intron | 40.0% | |
| TTCAAATGCAAATGAGCAGC+TGG | + | chr4.4:19489765-19489784 | MS.gene35140:CDS | 40.0% | |
| TTCCTTAACATGTGCCCTTA+GGG | + | chr4.4:19487811-19487830 | MS.gene35140:intron | 40.0% | |
| TTGACGCATGGTCTATGAAT+TGG | + | chr4.4:19485655-19485674 | MS.gene35140:intron | 40.0% | |
| TTGCTAAGTACTCTTAGGGA+TGG | + | chr4.4:19485618-19485637 | MS.gene35140:intron | 40.0% | |
| ! | ACTGCTTGGTTTGAGAAGAA+TGG | + | chr4.4:19486973-19486992 | MS.gene35140:intron | 40.0% |
| ! | CAAATCTCTCCTCTTTTCCA+TGG | - | chr4.4:19489294-19489313 | None:intergenic | 40.0% |
| ! | CCCTTCCACATATTTTACAC+TGG | + | chr4.4:19486065-19486084 | MS.gene35140:intron | 40.0% |
| ! | CGATCAAAGTACCTGAAACA+AGG | - | chr4.4:19486873-19486892 | None:intergenic | 40.0% |
| ! | CTGCTTGGTTTGAGAAGAAT+GGG | + | chr4.4:19486974-19486993 | MS.gene35140:intron | 40.0% |
| ! | CTTGCTTTCTAGGCTTTATG+AGG | + | chr4.4:19489034-19489053 | MS.gene35140:intron | 40.0% |
| ! | GATATACTGGCTATGGGAAA+TGG | + | chr4.4:19488507-19488526 | MS.gene35140:intron | 40.0% |
| ! | GGAGAACTGTTTGAGTTATC+TGG | - | chr4.4:19487366-19487385 | None:intergenic | 40.0% |
| ! | GGATATCCAACTTGCTTTCT+AGG | + | chr4.4:19489024-19489043 | MS.gene35140:intron | 40.0% |
| ! | GTTTGAGTTATCTGGGAAAG+AGG | - | chr4.4:19487358-19487377 | None:intergenic | 40.0% |
| ! | TAGTGTTGGAGAACTTAGGA+AGG | + | chr4.4:19489003-19489022 | MS.gene35140:intron | 40.0% |
| ! | TCTGATGGTGTTGGATATTG+CGG | + | chr4.4:19485587-19485606 | MS.gene35140:intron | 40.0% |
| ! | TGATAGTGAAGATGGTGACT+TGG | + | chr4.4:19488391-19488410 | MS.gene35140:CDS | 40.0% |
| ! | TTTGAGGTTGCTGATGAAGA+TGG | + | chr4.4:19485158-19485177 | MS.gene35140:CDS | 40.0% |
| !! | ATTCTTTTCCAACGCCGATT+TGG | - | chr4.4:19484998-19485017 | None:intergenic | 40.0% |
| !! | ATTTGATTTGCAGGAGGAAG+TGG | + | chr4.4:19489604-19489623 | MS.gene35140:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr4.4:19487828-19487847 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr4.4:19487829-19487848 | None:intergenic | 40.0% |
| !! | TTTGATTTGCAGGAGGAAGT+GGG | + | chr4.4:19489605-19489624 | MS.gene35140:intron | 40.0% |
| !!! | CAGTGCTGGTTTTCTAGATA+AGG | + | chr4.4:19488198-19488217 | MS.gene35140:CDS | 40.0% |
| AAATATGTGGAAGGGAGTGG+TGG | - | chr4.4:19486060-19486079 | None:intergenic | 45.0% | |
| ACATGGATTTCCTGTTCCAG+AGG | + | chr4.4:19485422-19485441 | MS.gene35140:CDS | 45.0% | |
| ATTATTCGGCTGGCAGAACA+TGG | + | chr4.4:19486195-19486214 | MS.gene35140:CDS | 45.0% | |
| ATTCGGTCGATAAGTTCAGC+GGG | - | chr4.4:19484804-19484823 | None:intergenic | 45.0% | |
| CAAACATTAGACGGCACAGA+AGG | - | chr4.4:19487141-19487160 | None:intergenic | 45.0% | |
| CAATCCAGCGAGTTAGTACA+AGG | + | chr4.4:19488816-19488835 | MS.gene35140:intron | 45.0% | |
| CATGTCCCTCATCCTAAACA+TGG | - | chr4.4:19489267-19489286 | None:intergenic | 45.0% | |
| CGATTCTAATGAAGGGAGAG+AGG | + | chr4.4:19488141-19488160 | MS.gene35140:CDS | 45.0% | |
| GATCAGGCTTTGCAAACACA+TGG | + | chr4.4:19485405-19485424 | MS.gene35140:intron | 45.0% | |
| GCACTTACAGAGGATAACCT+TGG | - | chr4.4:19485488-19485507 | None:intergenic | 45.0% | |
| GGTTTGAGAAGAATGGGAGA+GGG | + | chr4.4:19486980-19486999 | MS.gene35140:intron | 45.0% | |
| GTCAGATCTCAAGCATATCC+TGG | - | chr4.4:19485694-19485713 | None:intergenic | 45.0% | |
| GTTATCTGGGAAAGAGGAGA+TGG | - | chr4.4:19487352-19487371 | None:intergenic | 45.0% | |
| GTTTGAGAAGAATGGGAGAG+GGG | + | chr4.4:19486981-19487000 | MS.gene35140:intron | 45.0% | |
| TAATGCTGACAAGTGCACAC+AGG | - | chr4.4:19486272-19486291 | None:intergenic | 45.0% | |
| TAGTCCTGTGTCTTATCCCT+AGG | + | chr4.4:19487524-19487543 | MS.gene35140:intron | 45.0% | |
| TCATCCTAGTTTCGTCTTGG+AGG | - | chr4.4:19488869-19488888 | None:intergenic | 45.0% | |
| TCCTTAACATGTGCCCTCAA+GGG | - | chr4.4:19487697-19487716 | None:intergenic | 45.0% | |
| TCGTCTTGGAGGTGGTATTT+GGG | - | chr4.4:19488858-19488877 | None:intergenic | 45.0% | |
| TCTGCAGTTTATTGAAGGCG+AGG | + | chr4.4:19488349-19488368 | MS.gene35140:intron | 45.0% | |
| TCTTCAATAGACAGCAGTGC+TGG | + | chr4.4:19488184-19488203 | MS.gene35140:CDS | 45.0% | |
| TGCTATAGCATCAGCTCGTA+GGG | + | chr4.4:19489673-19489692 | MS.gene35140:CDS | 45.0% | |
| TGGTTTGAGAAGAATGGGAG+AGG | + | chr4.4:19486979-19486998 | MS.gene35140:intron | 45.0% | |
| TTACCGTATCCCCGTTAACA+AGG | + | chr4.4:19489443-19489462 | MS.gene35140:intron | 45.0% | |
| TTCCTTAACATGTGCCCTCA+AGG | - | chr4.4:19487698-19487717 | None:intergenic | 45.0% | |
| TTCGTCTTGGAGGTGGTATT+TGG | - | chr4.4:19488859-19488878 | None:intergenic | 45.0% | |
| ! | AATGCTAACTTGTGCCCTTG+AGG | + | chr4.4:19487680-19487699 | MS.gene35140:intron | 45.0% |
| ! | AGTCAACTCTCTGATGGTGT+TGG | + | chr4.4:19485578-19485597 | MS.gene35140:intron | 45.0% |
| ! | ATCGGCGTTGGAAAAGAATC+TGG | + | chr4.4:19484999-19485018 | MS.gene35140:CDS | 45.0% |
| ! | ATGCTAACTTGTGCCCTTGA+GGG | + | chr4.4:19487681-19487700 | MS.gene35140:intron | 45.0% |
| ! | CATGTTTGAGACGAGCGATT+CGG | - | chr4.4:19484821-19484840 | None:intergenic | 45.0% |
| ! | GATTCGGTCGATAAGTTCAG+CGG | - | chr4.4:19484805-19484824 | None:intergenic | 45.0% |
| ! | GGCATCAGCAGTTTTCAGAA+AGG | - | chr4.4:19488658-19488677 | None:intergenic | 45.0% |
| ! | GTAATCATGTCGCTTGTCCA+AGG | + | chr4.4:19485468-19485487 | MS.gene35140:CDS | 45.0% |
| !! | ACGAAAAAGGGCACTTACAG+AGG | - | chr4.4:19485498-19485517 | None:intergenic | 45.0% |
| !! | ATTTGGGAAGAGTACCATCG+AGG | - | chr4.4:19488842-19488861 | None:intergenic | 45.0% |
| !! | GATAAGGAACTTGCTGCTAG+TGG | + | chr4.4:19488214-19488233 | MS.gene35140:CDS | 45.0% |
| !!! | GAACTTGCTGCTAGTGGTTT+TGG | + | chr4.4:19488220-19488239 | MS.gene35140:CDS | 45.0% |
| AAAGGTAGAGGCAAGCGACA+CGG | + | chr4.4:19489339-19489358 | MS.gene35140:CDS | 50.0% | |
| AAGAGGAGATGGAGGAAAGG+AGG | - | chr4.4:19487341-19487360 | None:intergenic | 50.0% | |
| AATGAAGGGAGAGAGGAAGC+TGG | + | chr4.4:19488148-19488167 | MS.gene35140:CDS | 50.0% | |
| ACCACCTCCAAGACGAAACT+AGG | + | chr4.4:19488862-19488881 | MS.gene35140:intron | 50.0% | |
| AGAGGAGATGGAGGAAAGGA+GGG | - | chr4.4:19487340-19487359 | None:intergenic | 50.0% | |
| ATCGCTCGTCTCAAACATGG+TGG | + | chr4.4:19484822-19484841 | MS.gene35140:CDS | 50.0% | |
| ATCTGGGAAAGAGGAGATGG+AGG | - | chr4.4:19487349-19487368 | None:intergenic | 50.0% | |
| ATGAAGGGAGAGAGGAAGCT+GGG | + | chr4.4:19488149-19488168 | MS.gene35140:CDS | 50.0% | |
| ATTTCCTGTTCCAGAGGCTG+TGG | + | chr4.4:19485428-19485447 | MS.gene35140:CDS | 50.0% | |
| CAAACATGGTGGCACCTACA+AGG | + | chr4.4:19484833-19484852 | MS.gene35140:CDS | 50.0% | |
| CAGCGGATCTGAAAAGGTAG+AGG | + | chr4.4:19489327-19489346 | MS.gene35140:CDS | 50.0% | |
| CATATTCGGCTCACCGGATT+GGG | - | chr4.4:19488939-19488958 | None:intergenic | 50.0% | |
| CGAATCGCTCGTCTCAAACA+TGG | + | chr4.4:19484819-19484838 | MS.gene35140:CDS | 50.0% | |
| CGATTATGTTCCACAGCCTC+TGG | - | chr4.4:19485441-19485460 | None:intergenic | 50.0% | |
| CTCACAAAGACAAGGGTGGT+AGG | + | chr4.4:19489723-19489742 | MS.gene35140:CDS | 50.0% | |
| GACGGAAGAAACTTGGATCC+AGG | + | chr4.4:19489696-19489715 | MS.gene35140:CDS | 50.0% | |
| GAGTTAGTACAAGGCCTCGA+TGG | + | chr4.4:19488825-19488844 | MS.gene35140:intron | 50.0% | |
| GATGAGGGACATGAAAGCCA+TGG | + | chr4.4:19489274-19489293 | MS.gene35140:CDS | 50.0% | |
| GCAGTTTATTGAAGGCGAGG+TGG | + | chr4.4:19488352-19488371 | MS.gene35140:intron | 50.0% | |
| GCTATAGCATCAGCTCGTAG+GGG | + | chr4.4:19489674-19489693 | MS.gene35140:CDS | 50.0% | |
| GGAAAGAGGAGATGGAGGAA+AGG | - | chr4.4:19487344-19487363 | None:intergenic | 50.0% | |
| GGATTTCGCCTTACCTACCT+TGG | + | chr4.4:19484912-19484931 | MS.gene35140:CDS | 50.0% | |
| GTGCTATAGCATCAGCTCGT+AGG | + | chr4.4:19489672-19489691 | MS.gene35140:CDS | 50.0% | |
| GTTCTCACCGCCGTTGAATT+GGG | + | chr4.4:19484756-19484775 | MS.gene35140:CDS | 50.0% | |
| GTTCTGCAAATGCAGCGTTC+AGG | + | chr4.4:19486122-19486141 | MS.gene35140:intron | 50.0% | |
| TCATATTCGGCTCACCGGAT+TGG | - | chr4.4:19488940-19488959 | None:intergenic | 50.0% | |
| TCCTAGTTTCGTCTTGGAGG+TGG | - | chr4.4:19488866-19488885 | None:intergenic | 50.0% | |
| TCTCATGCCCAATTCAACGG+CGG | - | chr4.4:19484766-19484785 | None:intergenic | 50.0% | |
| TGCGACACAGACACCATTTG+CGG | - | chr4.4:19486420-19486439 | None:intergenic | 50.0% | |
| TTCGGTCGATAAGTTCAGCG+GGG | - | chr4.4:19484803-19484822 | None:intergenic | 50.0% | |
| ! | TGCCCTAAGGGCACATGTTA+AGG | - | chr4.4:19487816-19487835 | None:intergenic | 50.0% |
| !! | AAAGGTGTCTTCGTCTCCGT+TGG | + | chr4.4:19484969-19484988 | MS.gene35140:CDS | 50.0% |
| AATGACACGACGCTCACGTG+AGG | - | chr4.4:19485076-19485095 | None:intergenic | 55.0% | |
| ATGACACGACGCTCACGTGA+GGG | - | chr4.4:19485075-19485094 | None:intergenic | 55.0% | |
| CCGGTGAGCCGAATATGACA+CGG | + | chr4.4:19488942-19488961 | MS.gene35140:intron | 55.0% | |
| CCGTGTCATATTCGGCTCAC+CGG | - | chr4.4:19488945-19488964 | None:intergenic | 55.0% | |
| CGTAGGGGACGGAAGAAACT+TGG | + | chr4.4:19489689-19489708 | MS.gene35140:CDS | 55.0% | |
| CTCACGTGAGGGTCATACAC+TGG | - | chr4.4:19485064-19485083 | None:intergenic | 55.0% | |
| GGTTCTCACCGCCGTTGAAT+TGG | + | chr4.4:19484755-19484774 | MS.gene35140:CDS | 55.0% | |
| GTCTCCGTTGGTCGCCAAAT+CGG | + | chr4.4:19484981-19485000 | MS.gene35140:CDS | 55.0% | |
| GTTCAGCGGGGACAATTTCG+TGG | - | chr4.4:19484791-19484810 | None:intergenic | 55.0% | |
| TAGCATCAGCTCGTAGGGGA+CGG | + | chr4.4:19489678-19489697 | MS.gene35140:CDS | 55.0% | |
| ! | GAGGCCTTGTACTAACTCGC+TGG | - | chr4.4:19488823-19488842 | None:intergenic | 55.0% |
| ! | GCCCTTGAGGGCACATGTTA+AGG | + | chr4.4:19487693-19487712 | MS.gene35140:intron | 55.0% |
| !! | AACGCCGATTTGGCGACCAA+CGG | - | chr4.4:19484988-19485007 | None:intergenic | 55.0% |
| !! | TGTTCCACAGCCTCTGGAAC+AGG | - | chr4.4:19485435-19485454 | None:intergenic | 55.0% |
| GTTGGTCGCCAAATCGGCGT+TGG | + | chr4.4:19484987-19485006 | MS.gene35140:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19484705 | 19489790 | 19484705 | ID=MS.gene35140 |
| chr4.4 | mRNA | 19484705 | 19489790 | 19484705 | ID=MS.gene35140.t1;Parent=MS.gene35140 |
| chr4.4 | exon | 19484705 | 19485020 | 19484705 | ID=MS.gene35140.t1.exon1;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19484705 | 19485020 | 19484705 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19485153 | 19485328 | 19485153 | ID=MS.gene35140.t1.exon2;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19485153 | 19485328 | 19485153 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19485411 | 19485499 | 19485411 | ID=MS.gene35140.t1.exon3;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19485411 | 19485499 | 19485411 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19486137 | 19486254 | 19486137 | ID=MS.gene35140.t1.exon4;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19486137 | 19486254 | 19486137 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19486381 | 19486454 | 19486381 | ID=MS.gene35140.t1.exon5;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19486381 | 19486454 | 19486381 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19486881 | 19486928 | 19486881 | ID=MS.gene35140.t1.exon6;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19486881 | 19486928 | 19486881 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19488102 | 19488270 | 19488102 | ID=MS.gene35140.t1.exon7;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19488102 | 19488270 | 19488102 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19488356 | 19488472 | 19488356 | ID=MS.gene35140.t1.exon8;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19488356 | 19488472 | 19488356 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19489274 | 19489360 | 19489274 | ID=MS.gene35140.t1.exon9;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19489274 | 19489360 | 19489274 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| chr4.4 | exon | 19489617 | 19489790 | 19489617 | ID=MS.gene35140.t1.exon10;Parent=MS.gene35140.t1 |
| chr4.4 | CDS | 19489617 | 19489790 | 19489617 | ID=cds.MS.gene35140.t1;Parent=MS.gene35140.t1 |
| Gene Sequence |
| Protein sequence |
