Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030707.t1 | XP_003630123.2 | 99 | 1009 | 10 | 0 | 1 | 1009 | 1 | 1009 | 0.00E+00 | 1976.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030707.t1 | Q9XIK4 | 71.9 | 1014 | 274 | 6 | 1 | 1008 | 1 | 1009 | 0.0e+00 | 1434.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030707.t1 | G7LBB9 | 99.0 | 1009 | 10 | 0 | 1 | 1009 | 1 | 1009 | 0.0e+00 | 1976.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030707.t1 | MTR_8g092060 | 98.931 | 1029 | 11 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2112 |
| MS.gene030707.t1 | MTR_2g028030 | 74.951 | 1030 | 229 | 9 | 1 | 1026 | 1 | 1005 | 0.0 | 1551 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030707.t1 | AT1G10490 | 71.512 | 1032 | 283 | 6 | 1 | 1026 | 1 | 1027 | 0.0 | 1466 |
| MS.gene030707.t1 | AT1G10490 | 71.512 | 1032 | 283 | 6 | 1 | 1026 | 1 | 1027 | 0.0 | 1466 |
| MS.gene030707.t1 | AT3G57940 | 70.158 | 1012 | 287 | 6 | 1 | 1008 | 1 | 1001 | 0.0 | 1412 |
| MS.gene030707.t1 | AT3G57940 | 69.862 | 1012 | 285 | 7 | 1 | 1008 | 1 | 996 | 0.0 | 1396 |
Find 220 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCCTTGATGCAATTT+TGG | 0.109454 | 4.3:+9281644 | MS.gene030707:CDS |
| TGGTATAACCTGCTAATATT+AGG | 0.153603 | 4.3:-9284095 | None:intergenic |
| GCTTTCGCAAGTTGAATTAT+TGG | 0.181367 | 4.3:+9283036 | MS.gene030707:CDS |
| TTCCTGTCTTCCACTGTTAA+TGG | 0.209425 | 4.3:+9283124 | MS.gene030707:CDS |
| CATCATTATTCAAGGGTTTC+AGG | 0.210462 | 4.3:-9287878 | None:intergenic |
| CCTTACAACAGTAGCATTCT+TGG | 0.213127 | 4.3:-9282812 | None:intergenic |
| GTCTTTGCTTGGCCCATATC+TGG | 0.233387 | 4.3:+9283099 | MS.gene030707:CDS |
| ATGAACCCACCCTGGTAAAA+TGG | 0.256257 | 4.3:-9287942 | None:intergenic |
| AATGACGACCCAGGGTCTTT+TGG | 0.257695 | 4.3:+9279785 | MS.gene030707:CDS |
| CCGTGGACCTCTTTCGCTTT+TGG | 0.262875 | 4.3:+9287679 | MS.gene030707:CDS |
| AATATTGTCTCTATTTATAA+AGG | 0.271442 | 4.3:+9289651 | MS.gene030707:CDS |
| CGATCCATGTTTGTCATTAT+CGG | 0.274182 | 4.3:+9279248 | MS.gene030707:CDS |
| AAGCATTCTGAAAGAGTTCT+TGG | 0.279878 | 4.3:+9279873 | MS.gene030707:CDS |
| GCAAAGATTTGCTAAACTTC+TGG | 0.287441 | 4.3:+9288051 | MS.gene030707:CDS |
| GGTATAACCTGCTAATATTA+GGG | 0.307074 | 4.3:-9284094 | None:intergenic |
| CTTCGGGATGTGTGTTCTTC+AGG | 0.309009 | 4.3:+9279902 | MS.gene030707:CDS |
| CATGACCACGCATGCCTTAC+AGG | 0.309529 | 4.3:-9280387 | None:intergenic |
| ATCAGAACTCTCATTGAAAA+TGG | 0.315497 | 4.3:+9279209 | MS.gene030707:CDS |
| CAGCCATAAATCAAGTAAAA+AGG | 0.320830 | 4.3:+9290371 | MS.gene030707:CDS |
| GACCTTATGTGAGATGAAAT+TGG | 0.324806 | 4.3:-9280431 | None:intergenic |
| GCATACCGCTGGAGCAATTC+AGG | 0.326482 | 4.3:-9290189 | None:intergenic |
| TTGTCAGCAGTTGTCTTGAT+AGG | 0.327701 | 4.3:-9288439 | None:intergenic |
| CAAATGAGGAAGATCTGTTC+TGG | 0.328217 | 4.3:-9287592 | None:intergenic |
| GGGACTATCAGAAGCTTATC+AGG | 0.328308 | 4.3:+9281423 | MS.gene030707:CDS |
| TTCTGTTTAACAGGGACAAA+TGG | 0.330082 | 4.3:+9289612 | MS.gene030707:intron |
| TCCTGTCTTCCACTGTTAAT+GGG | 0.334912 | 4.3:+9283125 | MS.gene030707:CDS |
| GCTCTTGGTTTATCAATTGC+TGG | 0.336205 | 4.3:+9281726 | MS.gene030707:CDS |
| TTGTTCGCTGCTCGTGGCCG+TGG | 0.342740 | 4.3:+9281693 | MS.gene030707:CDS |
| CACCACTTATTTGTGCTACT+TGG | 0.343869 | 4.3:+9284452 | MS.gene030707:CDS |
| ATAGTTCTTGCTAGTAGATT+AGG | 0.345177 | 4.3:-9280042 | None:intergenic |
| GAGTTCTTGGCAACACCTTC+GGG | 0.345741 | 4.3:+9279886 | MS.gene030707:CDS |
| AAACTTAAAGAGGAACTAAA+TGG | 0.347516 | 4.3:+9281454 | MS.gene030707:CDS |
| GCCATCAATTGCAGATCATT+TGG | 0.348357 | 4.3:-9284416 | None:intergenic |
| GACAATGCCTTGCAAAATAC+TGG | 0.353277 | 4.3:+9290237 | MS.gene030707:CDS |
| CCGTGCTCTTAGCAGACATT+TGG | 0.355236 | 4.3:-9283391 | None:intergenic |
| CATTATCTCGGCGTCTCCTT+TGG | 0.356220 | 4.3:+9287651 | MS.gene030707:CDS |
| TTCCGTATCAGTGGTCCAAC+AGG | 0.357971 | 4.3:-9281484 | None:intergenic |
| TATTCACAGGTTTGCCTTGA+GGG | 0.360429 | 4.3:+9284797 | MS.gene030707:intron |
| GAAGACAGGAAGACCAGATA+TGG | 0.361242 | 4.3:-9283112 | None:intergenic |
| GATGACCATGGCTCAAACTT+TGG | 0.365532 | 4.3:-9284844 | None:intergenic |
| AGAGTTCTTGGCAACACCTT+CGG | 0.367420 | 4.3:+9279885 | MS.gene030707:CDS |
| GGCTTCCACTTTCCGTGGCA+TGG | 0.373750 | 4.3:+9288072 | MS.gene030707:CDS |
| GCGTTAAGCCAGCTTTCAAT+AGG | 0.380422 | 4.3:-9284041 | None:intergenic |
| TCCAAATGATCTGCAATTGA+TGG | 0.389508 | 4.3:+9284415 | MS.gene030707:CDS |
| AATAAAGCTTAACTGGAATC+TGG | 0.390038 | 4.3:-9287734 | None:intergenic |
| AACAAGGATACCTCTTCAAC+AGG | 0.390312 | 4.3:-9280467 | None:intergenic |
| CCGAGATAATGGAGCTTCTC+CGG | 0.393175 | 4.3:-9287639 | None:intergenic |
| TTCAATTTCATCATTATTCA+AGG | 0.394125 | 4.3:-9287886 | None:intergenic |
| TATAGATCACACTCACTTGC+TGG | 0.394267 | 4.3:-9284201 | None:intergenic |
| TCTACATGGTCTTGCATTCA+AGG | 0.399145 | 4.3:+9289696 | MS.gene030707:CDS |
| CAATCTTGCTGACTTTCATC+TGG | 0.401834 | 4.3:+9288528 | MS.gene030707:CDS |
| CAAAGGAGACGCCGAGATAA+TGG | 0.404698 | 4.3:-9287650 | None:intergenic |
| CGTGGGAAATCAGCTGCTCT+TGG | 0.405723 | 4.3:+9281711 | MS.gene030707:CDS |
| TCTGTTTAACAGGGACAAAT+GGG | 0.420355 | 4.3:+9289613 | MS.gene030707:intron |
| GTGATCTATACTATGTCAAT+CGG | 0.421633 | 4.3:+9284214 | MS.gene030707:CDS |
| CTGCACAGGTCTGCAGAATC+AGG | 0.422621 | 4.3:+9289194 | MS.gene030707:CDS |
| TGGATGACACACAAAATATC+AGG | 0.423019 | 4.3:-9284586 | None:intergenic |
| TGAGCATGTGATAATGTAAC+TGG | 0.428130 | 4.3:-9289156 | None:intergenic |
| TACCAATTTCATCTCACATA+AGG | 0.428327 | 4.3:+9280429 | MS.gene030707:CDS |
| GATACCTCTTCAACAGGAAC+TGG | 0.435352 | 4.3:-9280461 | None:intergenic |
| TTGAAAATGGCGTCAAATCA+AGG | 0.436134 | 4.3:+9279222 | MS.gene030707:CDS |
| GCATCACAGACAGACCATTC+AGG | 0.441433 | 4.3:+9282849 | MS.gene030707:CDS |
| GAATCCCACTCTCAGGCTAC+AGG | 0.446778 | 4.3:+9280329 | MS.gene030707:CDS |
| CGGTGACAAATCCCGTGATC+AGG | 0.453225 | 4.3:+9279268 | MS.gene030707:CDS |
| CATCACCATCGTGTACAAAC+TGG | 0.454198 | 4.3:-9280124 | None:intergenic |
| GTTGATGAAACAAATCAGTT+CGG | 0.459835 | 4.3:+9287909 | MS.gene030707:CDS |
| GAAAATGCATCGGCTTTCTC+AGG | 0.464462 | 4.3:-9279810 | None:intergenic |
| AAATTTGCTCCTTTCTACAT+TGG | 0.466347 | 4.3:+9287711 | MS.gene030707:CDS |
| GCTTCTTCCAAAAGCGAAAG+AGG | 0.467655 | 4.3:-9287686 | None:intergenic |
| CAGCGGTATGCCTTTGAAGA+TGG | 0.471481 | 4.3:+9290201 | MS.gene030707:CDS |
| AGGAAAAGCTTGAACTAAGC+AGG | 0.472967 | 4.3:+9279618 | MS.gene030707:CDS |
| TGTATTCTTACAGCGAATGA+TGG | 0.474059 | 4.3:+9284361 | MS.gene030707:intron |
| CTGTAAGGCATGCGTGGTCA+TGG | 0.476362 | 4.3:+9280388 | MS.gene030707:CDS |
| AGCACAAATAAGTGGTGTGC+TGG | 0.479388 | 4.3:-9284446 | None:intergenic |
| CTATTCACAGGTTTGCCTTG+AGG | 0.480472 | 4.3:+9284796 | MS.gene030707:intron |
| ATTGCTGGTGCTATTGCTGC+CGG | 0.480813 | 4.3:+9281741 | MS.gene030707:CDS |
| ATGCAAAGTTATGAAGGAAC+TGG | 0.481979 | 4.3:+9283323 | MS.gene030707:intron |
| CCAAGAATGCTACTGTTGTA+AGG | 0.489834 | 4.3:+9282812 | MS.gene030707:CDS |
| AAATGAGGAAGATCTGTTCT+GGG | 0.490856 | 4.3:-9287591 | None:intergenic |
| CCAACAGTGAAGTCTTTGCT+TGG | 0.491005 | 4.3:+9283088 | MS.gene030707:CDS |
| CGAGATAATGGAGCTTCTCC+GGG | 0.491889 | 4.3:-9287638 | None:intergenic |
| TGCTAGTACATCTGCGTGAA+AGG | 0.492280 | 4.3:+9287613 | MS.gene030707:CDS |
| CTTTGTTACTGCACCCAGTC+CGG | 0.496279 | 4.3:+9281864 | MS.gene030707:CDS |
| TTGTTTGAGTTTATATGCAA+AGG | 0.497050 | 4.3:+9281901 | MS.gene030707:CDS |
| ACTATCAATTGCCTCCTGTA+AGG | 0.497278 | 4.3:+9280373 | MS.gene030707:CDS |
| TGTTCGCTGCTCGTGGCCGT+GGG | 0.501663 | 4.3:+9281694 | MS.gene030707:CDS |
| TGTTTGAGTTTATATGCAAA+GGG | 0.501745 | 4.3:+9281902 | MS.gene030707:CDS |
| ACCCATTAACAGTGGAAGAC+AGG | 0.504081 | 4.3:-9283126 | None:intergenic |
| GCTAAGAGCACGGAGGGTGC+AGG | 0.504530 | 4.3:+9283401 | MS.gene030707:CDS |
| TGATTCTTCGATTCATCCAC+CGG | 0.505238 | 4.3:-9284559 | None:intergenic |
| CTGGGGATCCTATTGAAAGC+TGG | 0.505620 | 4.3:+9284033 | MS.gene030707:CDS |
| TTTCATTGTTTATGATAGGC+GGG | 0.509198 | 4.3:+9279829 | MS.gene030707:CDS |
| CGCAGATGTACTAGCAAATG+AGG | 0.511263 | 4.3:-9287606 | None:intergenic |
| GCTTGTGTGTTACTCTGCAC+AGG | 0.520610 | 4.3:+9289180 | MS.gene030707:CDS |
| CTCAGGATCCAAAAGACCCT+GGG | 0.520939 | 4.3:-9279793 | None:intergenic |
| TCCCTGTTGGACCACTGATA+CGG | 0.521720 | 4.3:+9281482 | MS.gene030707:CDS |
| CCGGAGAAGCTCCATTATCT+CGG | 0.521760 | 4.3:+9287639 | MS.gene030707:CDS |
| TTGTCAGTATAAAATCGAAC+CGG | 0.524708 | 4.3:+9290283 | MS.gene030707:CDS |
| GTATTCCATGCCACGGAAAG+TGG | 0.525307 | 4.3:-9288077 | None:intergenic |
| AGCGAAAGAGGTCCACGGTT+AGG | 0.528419 | 4.3:-9287674 | None:intergenic |
| TCGAACTGAATCCCACTCTC+AGG | 0.529910 | 4.3:+9280322 | MS.gene030707:CDS |
| TACATCTTTCAGCCGTGGCA+TGG | 0.532959 | 4.3:-9289731 | None:intergenic |
| TGGCAATGAACTTACCTGAA+TGG | 0.533576 | 4.3:-9282863 | None:intergenic |
| AGGGACAAATGGGGTTGGAA+AGG | 0.535630 | 4.3:+9289623 | MS.gene030707:intron |
| GGAACCTCTTAGTGTTTCTG+TGG | 0.536334 | 4.3:+9289974 | MS.gene030707:CDS |
| GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 4.3:-9287720 | None:intergenic |
| ATGCCATCCCTAATATTAGC+AGG | 0.538179 | 4.3:+9284087 | MS.gene030707:CDS |
| CTAAATGGAGATTTCCCTGT+TGG | 0.538752 | 4.3:+9281469 | MS.gene030707:CDS |
| TCTTGTCCAAAATTGCATCA+AGG | 0.540070 | 4.3:-9281650 | None:intergenic |
| AGTTACAGAAGCTGCAGAGA+AGG | 0.540274 | 4.3:+9286661 | MS.gene030707:CDS |
| ATAGAGACAGTGGAAGGAGG+AGG | 0.542491 | 4.3:+9280063 | MS.gene030707:CDS |
| CACACATCCTAGTGCAATGA+GGG | 0.543166 | 4.3:+9284961 | MS.gene030707:CDS |
| TCAGGACATTTCACACATTG+AGG | 0.543421 | 4.3:+9289212 | MS.gene030707:CDS |
| TAAACCAGTTCCTGTTGAAG+AGG | 0.545632 | 4.3:+9280457 | MS.gene030707:CDS |
| ACTGTCTGCAGTTATTATGA+AGG | 0.547316 | 4.3:+9286578 | MS.gene030707:intron |
| GCTTCTGTAACTGTAATTTG+TGG | 0.547860 | 4.3:-9286650 | None:intergenic |
| GTTTGATGTACTTGAATACA+AGG | 0.548311 | 4.3:+9281924 | MS.gene030707:CDS |
| TCAATTTCATCATTATTCAA+GGG | 0.550319 | 4.3:-9287885 | None:intergenic |
| GCAAGGCTCAAATCAAATCA+AGG | 0.550985 | 4.3:+9279573 | MS.gene030707:CDS |
| TGGATGAAGACCTCAACGAT+GGG | 0.551646 | 4.3:+9289994 | MS.gene030707:CDS |
| TGAGAATGATGTTGACGATA+AGG | 0.553110 | 4.3:+9286619 | MS.gene030707:CDS |
| TTGCTGGTGCTATTGCTGCC+GGG | 0.554680 | 4.3:+9281742 | MS.gene030707:CDS |
| CTTCTGGCTTCCACTTTCCG+TGG | 0.555143 | 4.3:+9288067 | MS.gene030707:CDS |
| ACGGCCACGAGCAGCGAACA+AGG | 0.556001 | 4.3:-9281691 | None:intergenic |
| TGATCTATACTATGTCAATC+GGG | 0.556230 | 4.3:+9284215 | MS.gene030707:CDS |
| CAGCTTTCAATAGGATCCCC+AGG | 0.557416 | 4.3:-9284032 | None:intergenic |
| TCTCAGGATCCAAAAGACCC+TGG | 0.561670 | 4.3:-9279794 | None:intergenic |
| TACCAAGTAGCACAAATAAG+TGG | 0.562485 | 4.3:-9284454 | None:intergenic |
| AAAGACTTCACTGTTGGCAG+TGG | 0.564718 | 4.3:-9283082 | None:intergenic |
| TCTTCATTATATGCTTAGCA+AGG | 0.565411 | 4.3:+9279556 | MS.gene030707:CDS |
| CATCTTCAAAGGCATACCGC+TGG | 0.566759 | 4.3:-9290200 | None:intergenic |
| TTCATTGTTTATGATAGGCG+GGG | 0.569131 | 4.3:+9279830 | MS.gene030707:CDS |
| CCAAGCAAAGACTTCACTGT+TGG | 0.571135 | 4.3:-9283088 | None:intergenic |
| GCTAGATTCTCCATCTTCAA+AGG | 0.571573 | 4.3:-9290211 | None:intergenic |
| TACTGTATAGGACGATATGA+AGG | 0.574051 | 4.3:+9290143 | MS.gene030707:intron |
| TTAACAGGGACAAATGGGGT+TGG | 0.574911 | 4.3:+9289618 | MS.gene030707:intron |
| GAGGTCCACGGTTAGGCCAA+AGG | 0.575632 | 4.3:-9287667 | None:intergenic |
| GAATCCATCAGATATGCTCC+TGG | 0.578441 | 4.3:+9284014 | MS.gene030707:CDS |
| AAGTACAGGTGCGAAAGTGC+AGG | 0.580964 | 4.3:-9289120 | None:intergenic |
| TCCAGACAAAATGAGGAAGA+AGG | 0.581483 | 4.3:+9279175 | None:intergenic |
| CATAAACAATGAAAATGCAT+CGG | 0.584102 | 4.3:-9279820 | None:intergenic |
| CATGGTATTTGATCTCCACA+AGG | 0.584673 | 4.3:-9284869 | None:intergenic |
| TATACTGACAAGACCACCTG+TGG | 0.585384 | 4.3:-9290271 | None:intergenic |
| ATTCACAGGTTTGCCTTGAG+GGG | 0.585666 | 4.3:+9284798 | MS.gene030707:intron |
| AATCCATCAGATATGCTCCT+GGG | 0.586271 | 4.3:+9284015 | MS.gene030707:CDS |
| GAAGTGTTCCACGTTGGACC+AGG | 0.586370 | 4.3:+9281504 | MS.gene030707:CDS |
| GAAGTTACCCTCATTGCACT+AGG | 0.587370 | 4.3:-9284968 | None:intergenic |
| GTTGCCTTGTTCGCTGCTCG+TGG | 0.587390 | 4.3:+9281687 | MS.gene030707:CDS |
| TTAAAGTCTGAAAACGAGCA+TGG | 0.587411 | 4.3:+9290309 | MS.gene030707:CDS |
| ACATCTGCGTGAAAGGCGCC+CGG | 0.587670 | 4.3:+9287620 | MS.gene030707:CDS |
| AACGCCCTGTAGCCTGAGAG+TGG | 0.588671 | 4.3:-9280334 | None:intergenic |
| AAGACAGGAAGACCAGATAT+GGG | 0.589306 | 4.3:-9283111 | None:intergenic |
| AGCAAGAACTATAGAGACAG+TGG | 0.589349 | 4.3:+9280053 | MS.gene030707:CDS |
| CGATGGGGCTAAACAAGTTG+AGG | 0.590660 | 4.3:+9290010 | MS.gene030707:CDS |
| ACCTGATAGAATAACGTGAC+TGG | 0.590808 | 4.3:+9287837 | MS.gene030707:intron |
| TGCCTCCTGTAAGGCATGCG+TGG | 0.591653 | 4.3:+9280382 | MS.gene030707:CDS |
| AGCCATGGTCATCAACCTTG+TGG | 0.591954 | 4.3:+9284854 | MS.gene030707:CDS |
| ATAAAACGATACCTGATCAC+GGG | 0.592447 | 4.3:-9279279 | None:intergenic |
| ATCCCCAGGAGCATATCTGA+TGG | 0.593961 | 4.3:-9284018 | None:intergenic |
| TAATTCACTATCCTTGTGGT+AGG | 0.594044 | 4.3:-9284250 | None:intergenic |
| TTGTAACACCATAAAACAGT+TGG | 0.597418 | 4.3:-9279596 | None:intergenic |
| ACTATAGAGACAGTGGAAGG+AGG | 0.598245 | 4.3:+9280060 | MS.gene030707:CDS |
| AACTGCTCACAAAATTTCCA+TGG | 0.599225 | 4.3:-9284887 | None:intergenic |
| AAAATAATTCACTATCCTTG+TGG | 0.600381 | 4.3:-9284254 | None:intergenic |
| ATGTCTGCTAAGAGCACGGA+GGG | 0.601997 | 4.3:+9283395 | MS.gene030707:CDS |
| AAATTCTACAAATATCTACA+TGG | 0.602639 | 4.3:+9289682 | MS.gene030707:CDS |
| TCATTGTTTATGATAGGCGG+GGG | 0.603523 | 4.3:+9279831 | MS.gene030707:CDS |
| TATAAAACGATACCTGATCA+CGG | 0.604633 | 4.3:-9279280 | None:intergenic |
| GACGAGATATCTGCCCCTCA+AGG | 0.606609 | 4.3:-9284811 | None:intergenic |
| TAACCTGCTAATATTAGGGA+TGG | 0.607113 | 4.3:-9284090 | None:intergenic |
| GGAGCTGAAGAAACTTAAAG+AGG | 0.607451 | 4.3:+9281444 | MS.gene030707:CDS |
| TCATCCACAGAAACACTAAG+AGG | 0.607502 | 4.3:-9289978 | None:intergenic |
| GACTGGCGAGCATTCATGCA+TGG | 0.609058 | 4.3:+9287854 | MS.gene030707:CDS |
| TAGAGACAGTGGAAGGAGGA+GGG | 0.610550 | 4.3:+9280064 | MS.gene030707:CDS |
| CCAAATGTCTGCTAAGAGCA+CGG | 0.613472 | 4.3:+9283391 | MS.gene030707:CDS |
| TAACTTACATCTTTCAGCCG+TGG | 0.614000 | 4.3:-9289736 | None:intergenic |
| CCACACATCCTAGTGCAATG+AGG | 0.617308 | 4.3:+9284960 | MS.gene030707:CDS |
| TGGAATACAAGCTTGCTATG+AGG | 0.617987 | 4.3:+9288092 | MS.gene030707:CDS |
| ATTGATGCTGCAGGACTCAG+AGG | 0.619238 | 4.3:+9281402 | MS.gene030707:intron |
| AATCCCACTCTCAGGCTACA+GGG | 0.620518 | 4.3:+9280330 | MS.gene030707:CDS |
| ATGCGAGCTCCTGAAAGTGA+AGG | 0.624310 | 4.3:-9284926 | None:intergenic |
| CAGTTTGTACACGATGGTGA+TGG | 0.626116 | 4.3:+9280125 | MS.gene030707:CDS |
| CAAGCTTGTATTCCATGCCA+CGG | 0.626773 | 4.3:-9288084 | None:intergenic |
| AGACAAAATGAGGAAGAAGG+TGG | 0.627687 | 4.3:+9279178 | None:intergenic |
| CGTCTCCTTTGGCCTAACCG+TGG | 0.629616 | 4.3:+9287662 | MS.gene030707:CDS |
| GTGGATGAAGACCTCAACGA+TGG | 0.630682 | 4.3:+9289993 | MS.gene030707:CDS |
| GCTATCCAAAGTTTGAGCCA+TGG | 0.630986 | 4.3:+9284839 | MS.gene030707:CDS |
| CCTCATTGCACTAGGATGTG+TGG | 0.631104 | 4.3:-9284960 | None:intergenic |
| TATTTGTATGACAGGACCGG+TGG | 0.632393 | 4.3:+9284543 | MS.gene030707:intron |
| GTGGAACACTTCCGTATCAG+TGG | 0.634428 | 4.3:-9281493 | None:intergenic |
| TTGATGCTGCAGGACTCAGA+GGG | 0.636185 | 4.3:+9281403 | MS.gene030707:intron |
| ACGCCCTGTAGCCTGAGAGT+GGG | 0.637356 | 4.3:-9280333 | None:intergenic |
| CTCCACAAGGTTGATGACCA+TGG | 0.637837 | 4.3:-9284856 | None:intergenic |
| CTTGTTTAGCCCCATCGTTG+AGG | 0.638898 | 4.3:-9290004 | None:intergenic |
| CTGTTTAACAGGGACAAATG+GGG | 0.641129 | 4.3:+9289614 | MS.gene030707:intron |
| ATTCAGTTCGAAATCTGTCG+TGG | 0.643656 | 4.3:-9280310 | None:intergenic |
| TTTGCATATAAACTCAAACA+AGG | 0.644235 | 4.3:-9281899 | None:intergenic |
| CTTGTGGAGATCAAATACCA+TGG | 0.649950 | 4.3:+9284870 | MS.gene030707:CDS |
| AGATCGAATCAACCATGCCA+CGG | 0.650410 | 4.3:+9289719 | MS.gene030707:CDS |
| TCACTCCTGAATTGCTCCAG+CGG | 0.651035 | 4.3:+9290184 | MS.gene030707:CDS |
| CAAGAGCAGCTGATTTCCCA+CGG | 0.651139 | 4.3:-9281710 | None:intergenic |
| AGAACTATAGAGACAGTGGA+AGG | 0.654646 | 4.3:+9280057 | MS.gene030707:CDS |
| GTCACCGATAATGACAAACA+TGG | 0.659550 | 4.3:-9279252 | None:intergenic |
| TCTAGTCGCTTCATATCATG+TGG | 0.661842 | 4.3:-9288493 | None:intergenic |
| TCCGTATCAGTGGTCCAACA+GGG | 0.663742 | 4.3:-9281483 | None:intergenic |
| ATCCATCAGATATGCTCCTG+GGG | 0.663879 | 4.3:+9284016 | MS.gene030707:CDS |
| ACATGATATGAAGCGACTAG+AGG | 0.666290 | 4.3:+9288495 | MS.gene030707:CDS |
| AATGCCTTGCAAAATACTGG+TGG | 0.667743 | 4.3:+9290240 | MS.gene030707:CDS |
| CCAAAAGCGAAAGAGGTCCA+CGG | 0.671055 | 4.3:-9287679 | None:intergenic |
| CTGAAGAACACACATCCCGA+AGG | 0.674615 | 4.3:-9279901 | None:intergenic |
| AGATCACACTCACTTGCTGG+AGG | 0.685877 | 4.3:-9284198 | None:intergenic |
| ATACTGACAAGACCACCTGT+GGG | 0.694097 | 4.3:-9290270 | None:intergenic |
| GCTAACCAGTTTGTACACGA+TGG | 0.697246 | 4.3:+9280119 | MS.gene030707:CDS |
| GATACGGAAGTGTTCCACGT+TGG | 0.701379 | 4.3:+9281498 | MS.gene030707:CDS |
| GGATGAAGACCTCAACGATG+GGG | 0.701949 | 4.3:+9289995 | MS.gene030707:CDS |
| TAATCCTACCTGGTCCAACG+TGG | 0.704729 | 4.3:-9281512 | None:intergenic |
| CCAGTCATACCCATTAACAG+TGG | 0.707802 | 4.3:-9283134 | None:intergenic |
| GACCACGCATGCCTTACAGG+AGG | 0.710844 | 4.3:-9280384 | None:intergenic |
| AAGTCTGAAAACGAGCATGG+AGG | 0.737070 | 4.3:+9290312 | MS.gene030707:CDS |
| AATGTCTGCTAAGAGCACGG+AGG | 0.777641 | 4.3:+9283394 | MS.gene030707:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 9279185 | 9290410 | 9279185 | ID=MS.gene030707 |
| chr4.3 | mRNA | 9279185 | 9290410 | 9279185 | ID=MS.gene030707.t1;Parent=MS.gene030707 |
| chr4.3 | exon | 9279185 | 9279289 | 9279185 | ID=MS.gene030707.t1.exon1;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9279185 | 9279289 | 9279185 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9279548 | 9279639 | 9279548 | ID=MS.gene030707.t1.exon2;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9279548 | 9279639 | 9279548 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9279752 | 9279923 | 9279752 | ID=MS.gene030707.t1.exon3;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9279752 | 9279923 | 9279752 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9280024 | 9280146 | 9280024 | ID=MS.gene030707.t1.exon4;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9280024 | 9280146 | 9280024 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9280305 | 9280478 | 9280305 | ID=MS.gene030707.t1.exon5;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9280305 | 9280478 | 9280305 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9281415 | 9281525 | 9281415 | ID=MS.gene030707.t1.exon6;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9281415 | 9281525 | 9281415 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9281630 | 9281763 | 9281630 | ID=MS.gene030707.t1.exon7;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9281630 | 9281763 | 9281630 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9281852 | 9281945 | 9281852 | ID=MS.gene030707.t1.exon8;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9281852 | 9281945 | 9281852 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9282775 | 9282870 | 9282775 | ID=MS.gene030707.t1.exon9;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9282775 | 9282870 | 9282775 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9283010 | 9283146 | 9283010 | ID=MS.gene030707.t1.exon10;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9283010 | 9283146 | 9283010 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9283331 | 9283422 | 9283331 | ID=MS.gene030707.t1.exon11;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9283331 | 9283422 | 9283331 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9283985 | 9284108 | 9283985 | ID=MS.gene030707.t1.exon12;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9283985 | 9284108 | 9283985 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9284194 | 9284281 | 9284194 | ID=MS.gene030707.t1.exon13;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9284194 | 9284281 | 9284194 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9284374 | 9284473 | 9284374 | ID=MS.gene030707.t1.exon14;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9284374 | 9284473 | 9284374 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9284557 | 9284609 | 9284557 | ID=MS.gene030707.t1.exon15;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9284557 | 9284609 | 9284557 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9284806 | 9284982 | 9284806 | ID=MS.gene030707.t1.exon16;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9284806 | 9284982 | 9284806 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9285077 | 9285114 | 9285077 | ID=MS.gene030707.t1.exon17;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9285077 | 9285114 | 9285077 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9286589 | 9286682 | 9286589 | ID=MS.gene030707.t1.exon18;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9286589 | 9286682 | 9286589 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9287564 | 9287743 | 9287564 | ID=MS.gene030707.t1.exon19;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9287564 | 9287743 | 9287564 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9287846 | 9287954 | 9287846 | ID=MS.gene030707.t1.exon20;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9287846 | 9287954 | 9287846 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9288044 | 9288113 | 9288044 | ID=MS.gene030707.t1.exon21;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9288044 | 9288113 | 9288044 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9288402 | 9288549 | 9288402 | ID=MS.gene030707.t1.exon22;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9288402 | 9288549 | 9288402 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9289105 | 9289233 | 9289105 | ID=MS.gene030707.t1.exon23;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9289105 | 9289233 | 9289105 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9289625 | 9289750 | 9289625 | ID=MS.gene030707.t1.exon24;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9289625 | 9289750 | 9289625 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9289966 | 9290031 | 9289966 | ID=MS.gene030707.t1.exon25;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9289966 | 9290031 | 9289966 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| chr4.3 | exon | 9290153 | 9290410 | 9290153 | ID=MS.gene030707.t1.exon26;Parent=MS.gene030707.t1 |
| chr4.3 | CDS | 9290153 | 9290410 | 9290153 | ID=cds.MS.gene030707.t1;Parent=MS.gene030707.t1 |
| Gene Sequence |
| Protein sequence |
