Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028318.t1 | XP_013457341.1 | 98 | 460 | 3 | 2 | 1 | 454 | 1 | 460 | 2.90E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028318.t1 | Q54T05 | 58.7 | 329 | 119 | 2 | 1 | 329 | 1 | 312 | 5.6e-104 | 379.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028318.t1 | A0A072UP04 | 98.0 | 460 | 3 | 2 | 1 | 454 | 1 | 460 | 2.1e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028318.t1 | MTR_4g094615 | 98.043 | 460 | 3 | 2 | 1 | 454 | 1 | 460 | 0.0 | 915 |
| MS.gene028318.t1 | MTR_4g094615 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 757 |
| MS.gene028318.t1 | MTR_4g094615 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 757 |
| MS.gene028318.t1 | MTR_8g090145 | 68.715 | 179 | 40 | 4 | 284 | 454 | 24 | 194 | 7.20e-61 | 198 |
| MS.gene028318.t1 | MTR_4g087670 | 65.909 | 44 | 15 | 0 | 153 | 196 | 12 | 55 | 2.23e-14 | 68.2 |
| MS.gene028318.t1 | MTR_7g012400 | 24.590 | 305 | 186 | 10 | 81 | 346 | 107 | 406 | 9.16e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028318.t1 | AT3G51270 | 66.737 | 475 | 123 | 8 | 1 | 454 | 1 | 461 | 0.0 | 560 |
| MS.gene028318.t1 | AT3G51270 | 66.737 | 475 | 123 | 8 | 1 | 454 | 1 | 461 | 0.0 | 560 |
| MS.gene028318.t1 | AT3G51270 | 66.737 | 475 | 123 | 8 | 1 | 454 | 1 | 461 | 0.0 | 560 |
| MS.gene028318.t1 | AT3G51270 | 64.523 | 482 | 119 | 11 | 1 | 454 | 1 | 458 | 0.0 | 531 |
Find 85 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTCTTTGTGAGAATTCC+TGG | 0.205564 | 4.2:-17638439 | None:intergenic |
| GGTTCTCACCGCCGTTGAAT+TGG | 0.262655 | 4.2:+17633426 | MS.gene028318:CDS |
| AACATCGTAGTAGTTATAAT+TGG | 0.288616 | 4.2:+17633903 | MS.gene028318:CDS |
| GAACTTGCTGCTAGTGGCTT+TGG | 0.348488 | 4.2:+17636925 | MS.gene028318:CDS |
| ATCAAAACTATGGTCAATAA+AGG | 0.354092 | 4.2:+17633622 | MS.gene028318:CDS |
| GTTCTCACCGCCGTTGAATT+GGG | 0.377927 | 4.2:+17633427 | MS.gene028318:CDS |
| GTTCAGCGGGGACAATTTCA+TGG | 0.402449 | 4.2:-17633459 | None:intergenic |
| GCTCTTACATCTTTGCATTA+CGG | 0.410534 | 4.2:-17635082 | None:intergenic |
| CGTAGGGGACGGAAGAAACT+TGG | 0.423011 | 4.2:+17638414 | MS.gene028318:CDS |
| TGCTATAGCATCAGCTCGTA+GGG | 0.423360 | 4.2:+17638398 | MS.gene028318:CDS |
| CGATTATGTTCCACAGCCTC+TGG | 0.430757 | 4.2:-17634083 | None:intergenic |
| ATTTATCTGCAGTTTATTGA+AGG | 0.437822 | 4.2:+17637049 | MS.gene028318:intron |
| GTCTCCGTTGGTCGCCAAAT+CGG | 0.440264 | 4.2:+17633652 | MS.gene028318:CDS |
| TGTTCCACAGCCTCTGGAAC+AGG | 0.441351 | 4.2:-17634077 | None:intergenic |
| CAATTATTGGTATAATCATT+CGG | 0.442452 | 4.2:+17634823 | MS.gene028318:CDS |
| ATTTGATTTGCAGGAGGAAG+TGG | 0.443491 | 4.2:+17638329 | MS.gene028318:intron |
| GGAAAAGAGGAGAGATTTGA+AGG | 0.444975 | 4.2:+17638000 | MS.gene028318:CDS |
| TTTCAATGAATTTAACATCA+TGG | 0.447196 | 4.2:+17634875 | MS.gene028318:CDS |
| GTTCTGCAAATGCAGCGTTC+AGG | 0.447538 | 4.2:+17634764 | MS.gene028318:intron |
| TTCTTTACATTTGTCAGAGC+AGG | 0.450728 | 4.2:+17637156 | MS.gene028318:CDS |
| ATCGGCGTTGGAAAAGAATC+TGG | 0.462402 | 4.2:+17633670 | MS.gene028318:CDS |
| TTTGAGGTTGCTGATGAAGA+TGG | 0.478832 | 4.2:+17633803 | MS.gene028318:CDS |
| TGAAAACAGCGGATCTGAAA+AGG | 0.481623 | 4.2:+17638023 | MS.gene028318:CDS |
| GATAACGACGATTCTAATGA+AGG | 0.490096 | 4.2:+17636838 | MS.gene028318:CDS |
| TAAAGAATTTGCTTTCATGA+AGG | 0.495198 | 4.2:+17633952 | MS.gene028318:CDS |
| TATTGGTATAATCATTCGGC+TGG | 0.496766 | 4.2:+17634827 | MS.gene028318:CDS |
| TTCAAATGCAAATGAGCAGC+TGG | 0.501357 | 4.2:+17638490 | MS.gene028318:CDS |
| TCTTCAATAGACAGCAGTGC+TGG | 0.505671 | 4.2:+17636889 | MS.gene028318:CDS |
| AATCATAACCAAGGTAGGTA+AGG | 0.513088 | 4.2:-17633591 | None:intergenic |
| GACGGAAGAAACTTGGATCC+AGG | 0.515564 | 4.2:+17638421 | MS.gene028318:CDS |
| TTTGATTTGCAGGAGGAAGT+GGG | 0.518753 | 4.2:+17638330 | MS.gene028318:intron |
| CATGTTTGAGACGAGCGATT+CGG | 0.519870 | 4.2:-17633489 | None:intergenic |
| GTGCTATAGCATCAGCTCGT+AGG | 0.522126 | 4.2:+17638397 | MS.gene028318:CDS |
| ATTTCCTGTTCCAGAGGCTG+TGG | 0.524597 | 4.2:+17634073 | MS.gene028318:CDS |
| TTATGGCTATGAAGTTACAT+AGG | 0.526717 | 4.2:+17633831 | MS.gene028318:CDS |
| TGAAACCATGTTTAGGATGA+GGG | 0.529887 | 4.2:+17637964 | MS.gene028318:intron |
| CAAACATGGTGGCACCTACA+AGG | 0.530222 | 4.2:+17633504 | MS.gene028318:CDS |
| GGATTCCGCCTTACCTACCT+TGG | 0.531140 | 4.2:+17633583 | MS.gene028318:CDS |
| AAGAAAATCATAACCAAGGT+AGG | 0.534589 | 4.2:-17633596 | None:intergenic |
| GTTTCTCATGCCCAATTCAA+CGG | 0.538032 | 4.2:-17633437 | None:intergenic |
| ATTCGGTCGATGAGTTCAGC+GGG | 0.538540 | 4.2:-17633472 | None:intergenic |
| AAGATGAGGAAGATATTCAA+AGG | 0.538915 | 4.2:+17636953 | MS.gene028318:CDS |
| TGATTTGCTAGATATATTTG+AGG | 0.539655 | 4.2:+17633787 | MS.gene028318:intron |
| AATGAAGGGAGAGAGGAAGC+TGG | 0.541964 | 4.2:+17636853 | MS.gene028318:CDS |
| TGCGACACAGACACCATTTG+CGG | 0.549608 | 4.2:-17635059 | None:intergenic |
| ATCATTCGGCTGGCAGAACA+TGG | 0.552935 | 4.2:+17634837 | MS.gene028318:CDS |
| GCTATGAAGTTACATAGGCT+TGG | 0.554098 | 4.2:+17633836 | MS.gene028318:CDS |
| CAGCGGATCTGAAAAGGAAG+AGG | 0.559164 | 4.2:+17638029 | MS.gene028318:CDS |
| AAAGGTGTCTTCGTCTCCGT+TGG | 0.561674 | 4.2:+17633640 | MS.gene028318:CDS |
| ACATGAAAGTCATGGAAAAG+AGG | 0.563019 | 4.2:+17637987 | MS.gene028318:CDS |
| ACAAATTCTGATAGTGAAGA+TGG | 0.564391 | 4.2:+17637088 | MS.gene028318:CDS |
| GTTGGTCGCCAAATCGGCGT+TGG | 0.564870 | 4.2:+17633658 | MS.gene028318:CDS |
| GATAAGGAACTTGCTGCTAG+TGG | 0.569623 | 4.2:+17636919 | MS.gene028318:CDS |
| AGATGAGGAAGATATTCAAA+GGG | 0.572279 | 4.2:+17636954 | MS.gene028318:CDS |
| CGAATCGCTCGTCTCAAACA+TGG | 0.579259 | 4.2:+17633490 | MS.gene028318:CDS |
| GATGAGGGACATGAAAGTCA+TGG | 0.580821 | 4.2:+17637979 | MS.gene028318:CDS |
| GTAATCATGTCGCTTGTCCA+AGG | 0.582155 | 4.2:+17634113 | MS.gene028318:CDS |
| GAGCAGGCTTTGCAAACACA+TGG | 0.582372 | 4.2:+17634050 | MS.gene028318:intron |
| AACGCCGATTTGGCGACCAA+CGG | 0.583074 | 4.2:-17633656 | None:intergenic |
| TAGCATCAGCTCGTAGGGGA+CGG | 0.585566 | 4.2:+17638403 | MS.gene028318:CDS |
| CAAATTCTTTAAGCGCAGCA+AGG | 0.587058 | 4.2:-17633940 | None:intergenic |
| CAGGAATTCTCACAAAGACA+AGG | 0.593405 | 4.2:+17638440 | MS.gene028318:CDS |
| TAGGTCATCTCAAAATGCTA+AGG | 0.601055 | 4.2:+17638467 | MS.gene028318:CDS |
| GCACTTACAGAGGATAACCT+TGG | 0.602178 | 4.2:-17634130 | None:intergenic |
| CGATTCTAATGAAGGGAGAG+AGG | 0.607327 | 4.2:+17636846 | MS.gene028318:CDS |
| CCCTAAAATCATCTTTCGAG+AGG | 0.609662 | 4.2:-17633405 | None:intergenic |
| ACATGGATTTCCTGTTCCAG+AGG | 0.611150 | 4.2:+17634067 | MS.gene028318:CDS |
| ATAACGACGATTCTAATGAA+GGG | 0.618074 | 4.2:+17636839 | MS.gene028318:CDS |
| TCTGCAGTTTATTGAAGGCG+AGG | 0.623489 | 4.2:+17637054 | MS.gene028318:intron |
| CATAACCAAGGTAGGTAAGG+CGG | 0.628376 | 4.2:-17633588 | None:intergenic |
| GACTTGGTGAGAAATCTGAA+TGG | 0.635828 | 4.2:+17637112 | MS.gene028318:CDS |
| GCAGTTTATTGAAGGCGAGG+TGG | 0.636859 | 4.2:+17637057 | MS.gene028318:intron |
| AAAGGAAGAGGCAAGCGACA+CGG | 0.642855 | 4.2:+17638041 | MS.gene028318:CDS |
| CATGACTCTACTAAATACGA+TGG | 0.643215 | 4.2:+17633562 | MS.gene028318:CDS |
| CTCACAAAGACAAGGGTGGT+AGG | 0.646398 | 4.2:+17638448 | MS.gene028318:CDS |
| TGATAGTGAAGATGGTGACT+TGG | 0.646642 | 4.2:+17637096 | MS.gene028318:CDS |
| TGGCAAGAAAATCATAACCA+AGG | 0.675307 | 4.2:-17633600 | None:intergenic |
| GATTCGGTCGATGAGTTCAG+CGG | 0.676008 | 4.2:-17633473 | None:intergenic |
| TCTCATGCCCAATTCAACGG+CGG | 0.688093 | 4.2:-17633434 | None:intergenic |
| AGGAATTCTCACAAAGACAA+GGG | 0.690996 | 4.2:+17638441 | MS.gene028318:CDS |
| AGATTTGAAGGTGAAAACAG+CGG | 0.713597 | 4.2:+17638012 | MS.gene028318:CDS |
| AATTCTCACAAAGACAAGGG+TGG | 0.720526 | 4.2:+17638444 | MS.gene028318:CDS |
| ATCGCTCGTCTCAAACATGG+TGG | 0.722151 | 4.2:+17633493 | MS.gene028318:CDS |
| GCTATAGCATCAGCTCGTAG+GGG | 0.722557 | 4.2:+17638399 | MS.gene028318:CDS |
| TTCGGTCGATGAGTTCAGCG+GGG | 0.765299 | 4.2:-17633471 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATTTATAAATCTCTT+AGG | - | chr4.2:17634575-17634594 | None:intergenic | 10.0% |
| !!! | GTTTATTGTTAAATTATTTT+CGG | + | chr4.2:17635932-17635951 | MS.gene028318:intron | 10.0% |
| !! | AAAGAAATATAAAACAATAG+TGG | + | chr4.2:17637295-17637314 | MS.gene028318:intron | 15.0% |
| !! | GAAAATTAATTAACTACAAA+AGG | + | chr4.2:17637427-17637446 | MS.gene028318:intron | 15.0% |
| !! | TACAAATATTTGTATCAAAT+TGG | - | chr4.2:17636272-17636291 | None:intergenic | 15.0% |
| !! | TCAATTAGAATTGTAATATA+CGG | - | chr4.2:17637933-17637952 | None:intergenic | 15.0% |
| !!! | AAATATTTTGAATTACTCTA+AGG | + | chr4.2:17634586-17634605 | MS.gene028318:intron | 15.0% |
| !!! | AACTTTTTATTGAGTTTAAT+TGG | + | chr4.2:17635372-17635391 | MS.gene028318:intron | 15.0% |
| !!! | TTAACTTATTGAAAGATTTT+GGG | + | chr4.2:17636726-17636745 | MS.gene028318:intron | 15.0% |
| !!! | TTATTTTGATGAATTTAGTT+AGG | + | chr4.2:17637255-17637274 | MS.gene028318:intron | 15.0% |
| !! | AAAAATTGATTGCTAAACAA+AGG | - | chr4.2:17636095-17636114 | None:intergenic | 20.0% |
| !! | AAAATTGATTGCTAAACAAA+GGG | - | chr4.2:17636094-17636113 | None:intergenic | 20.0% |
| !! | AAATCAAATTAACACCATTA+TGG | - | chr4.2:17638318-17638337 | None:intergenic | 20.0% |
| !! | AATGCATTATAACTAAGAAA+AGG | - | chr4.2:17636996-17637015 | None:intergenic | 20.0% |
| !! | AGGATAGAGTTTAAATATTA+TGG | + | chr4.2:17634606-17634625 | MS.gene028318:intron | 20.0% |
| !! | ATAATAGTGATATTATGTGT+TGG | - | chr4.2:17635512-17635531 | None:intergenic | 20.0% |
| !! | ATGAGAAATAACATAGATTT+CGG | + | chr4.2:17634406-17634425 | MS.gene028318:intron | 20.0% |
| !! | CAATTATTGGTATAATCATT+CGG | + | chr4.2:17634823-17634842 | MS.gene028318:CDS | 20.0% |
| !! | CATTTCAAAATTAAGGAATT+TGG | + | chr4.2:17635716-17635735 | MS.gene028318:intron | 20.0% |
| !! | GATAAATTTGAAGATATTTG+AGG | - | chr4.2:17637036-17637055 | None:intergenic | 20.0% |
| !! | GGATAGAGTTTAAATATTAT+GGG | + | chr4.2:17634607-17634626 | MS.gene028318:intron | 20.0% |
| !! | TAATAGTGATATTATGTGTT+GGG | - | chr4.2:17635511-17635530 | None:intergenic | 20.0% |
| !! | TGTTATATTAGAAGAATCAA+GGG | - | chr4.2:17637384-17637403 | None:intergenic | 20.0% |
| !! | TTAGTTAAGTAGTAATGTTA+AGG | + | chr4.2:17635760-17635779 | MS.gene028318:intron | 20.0% |
| !! | TTTCAATGAATTTAACATCA+TGG | + | chr4.2:17634875-17634894 | MS.gene028318:CDS | 20.0% |
| !!! | AAAATTAAGGAATTTGGAAT+TGG | + | chr4.2:17635722-17635741 | MS.gene028318:intron | 20.0% |
| !!! | AAATTAAGGAATTTGGAATT+GGG | + | chr4.2:17635723-17635742 | MS.gene028318:intron | 20.0% |
| !!! | CTTAACTTATTGAAAGATTT+TGG | + | chr4.2:17636725-17636744 | MS.gene028318:intron | 20.0% |
| !!! | TCAACTAATATATTTTCGTT+AGG | + | chr4.2:17635536-17635555 | MS.gene028318:intron | 20.0% |
| !!! | TTATTTCTAGAAAATATCAC+AGG | - | chr4.2:17636154-17636173 | None:intergenic | 20.0% |
| !!! | TTCTTCATGATGAATTTTTT+GGG | + | chr4.2:17638120-17638139 | MS.gene028318:intron | 20.0% |
| ! | AACATCGTAGTAGTTATAAT+TGG | + | chr4.2:17633903-17633922 | MS.gene028318:CDS | 25.0% |
| ! | AGAGATACCAAATAGAAAAT+GGG | - | chr4.2:17636559-17636578 | None:intergenic | 25.0% |
| ! | ATAATTGCTAAGTACTCTTA+GGG | + | chr4.2:17634257-17634276 | MS.gene028318:intron | 25.0% |
| ! | ATATCACAGGACAAAAATTA+AGG | - | chr4.2:17636141-17636160 | None:intergenic | 25.0% |
| ! | ATCAAAACTATGGTCAATAA+AGG | + | chr4.2:17633622-17633641 | MS.gene028318:CDS | 25.0% |
| ! | ATTTATCTGCAGTTTATTGA+AGG | + | chr4.2:17637049-17637068 | MS.gene028318:intron | 25.0% |
| ! | CAAACAAAAGATAGAAAATG+AGG | - | chr4.2:17635219-17635238 | None:intergenic | 25.0% |
| ! | CAAGGAAAGATTATAAGTTA+AGG | - | chr4.2:17635562-17635581 | None:intergenic | 25.0% |
| ! | CAATATACTAATAGTGTGTA+TGG | - | chr4.2:17636667-17636686 | None:intergenic | 25.0% |
| ! | CATCATATCTTAAATTTCTG+TGG | - | chr4.2:17635318-17635337 | None:intergenic | 25.0% |
| ! | GAAAAAAAACAGAACTTGAA+GGG | - | chr4.2:17635131-17635150 | None:intergenic | 25.0% |
| ! | GTATGACAATAAAAAGCTAA+TGG | - | chr4.2:17637190-17637209 | None:intergenic | 25.0% |
| ! | GTGTTATATTAGAAGAATCA+AGG | - | chr4.2:17637385-17637404 | None:intergenic | 25.0% |
| ! | TATAATTGCTAAGTACTCTT+AGG | + | chr4.2:17634256-17634275 | MS.gene028318:intron | 25.0% |
| ! | TATCACAGGACAAAAATTAA+GGG | - | chr4.2:17636140-17636159 | None:intergenic | 25.0% |
| ! | TATTGTCATACAAGATATAC+TGG | + | chr4.2:17637199-17637218 | MS.gene028318:intron | 25.0% |
| ! | TCATACATAAAAGTCGTTTA+GGG | + | chr4.2:17634169-17634188 | MS.gene028318:intron | 25.0% |
| ! | TGATGAAGATGGAAAAATTA+TGG | + | chr4.2:17633814-17633833 | MS.gene028318:CDS | 25.0% |
| ! | TTAAGATTAAGAGTTGAGTA+AGG | - | chr4.2:17634471-17634490 | None:intergenic | 25.0% |
| ! | TTCATACATAAAAGTCGTTT+AGG | + | chr4.2:17634168-17634187 | MS.gene028318:intron | 25.0% |
| ! | TTGTTAATGAAACCATGTTT+AGG | + | chr4.2:17637957-17637976 | MS.gene028318:intron | 25.0% |
| !! | AATTAAGGAATTTGGAATTG+GGG | + | chr4.2:17635724-17635743 | MS.gene028318:intron | 25.0% |
| !! | GATTTGATCCTAATTTTCTA+TGG | + | chr4.2:17636362-17636381 | MS.gene028318:intron | 25.0% |
| !! | GGTGTTACATTTCAAAATTA+AGG | + | chr4.2:17635709-17635728 | MS.gene028318:intron | 25.0% |
| !! | TAAAGAATTTGCTTTCATGA+AGG | + | chr4.2:17633952-17633971 | MS.gene028318:CDS | 25.0% |
| !! | TTATAATCTTTCCTTGTTTC+AGG | + | chr4.2:17635566-17635585 | MS.gene028318:intron | 25.0% |
| !! | TTTTGATGAATTTAGTTAGG+AGG | + | chr4.2:17637258-17637277 | MS.gene028318:intron | 25.0% |
| !!! | ACAGTTTTTGAGACAATTAT+TGG | + | chr4.2:17634810-17634829 | MS.gene028318:CDS | 25.0% |
| !!! | ATTTAAAGTTTTCATTGCAC+TGG | + | chr4.2:17637766-17637785 | MS.gene028318:intron | 25.0% |
| !!! | CTGCATAACTTTTTTTTCAA+CGG | + | chr4.2:17637404-17637423 | MS.gene028318:intron | 25.0% |
| !!! | CTTCTTCATGATGAATTTTT+TGG | + | chr4.2:17638119-17638138 | MS.gene028318:intron | 25.0% |
| !!! | GTTATTTTGACATTATGTGT+TGG | + | chr4.2:17635643-17635662 | MS.gene028318:intron | 25.0% |
| !!! | TCATTACATGTCATTTTTTG+TGG | + | chr4.2:17634960-17634979 | MS.gene028318:intron | 25.0% |
| !!! | TGATTTGCTAGATATATTTG+AGG | + | chr4.2:17633787-17633806 | MS.gene028318:intron | 25.0% |
| !!! | TGCATAACTTTTTTTTCAAC+GGG | + | chr4.2:17637405-17637424 | MS.gene028318:intron | 25.0% |
| !!! | TTGTTCTTAAACTTGCTTTT+TGG | + | chr4.2:17634656-17634675 | MS.gene028318:intron | 25.0% |
| !!! | TTTATTGACCATAGTTTTGA+TGG | - | chr4.2:17633623-17633642 | None:intergenic | 25.0% |
| AACAAATAGACTCATCTGTT+AGG | + | chr4.2:17637331-17637350 | MS.gene028318:intron | 30.0% | |
| AACAATTCAAGTACATAGCT+GGG | - | chr4.2:17633991-17634010 | None:intergenic | 30.0% | |
| AAGAAAATCATAACCAAGGT+AGG | - | chr4.2:17633599-17633618 | None:intergenic | 30.0% | |
| AAGATCTTAACATGCAAAAC+AGG | - | chr4.2:17636298-17636317 | None:intergenic | 30.0% | |
| AAGATGAGGAAGATATTCAA+AGG | + | chr4.2:17636953-17636972 | MS.gene028318:CDS | 30.0% | |
| AATGCAGAACAAACATTAGA+CGG | - | chr4.2:17635857-17635876 | None:intergenic | 30.0% | |
| ACAAATAGACTCATCTGTTA+GGG | + | chr4.2:17637332-17637351 | MS.gene028318:intron | 30.0% | |
| ACAGATCTTAGATAAACTAC+AGG | - | chr4.2:17637858-17637877 | None:intergenic | 30.0% | |
| AGATGAGGAAGATATTCAAA+GGG | + | chr4.2:17636954-17636973 | MS.gene028318:CDS | 30.0% | |
| AGCATTTGCCATAGAAAATT+AGG | - | chr4.2:17636373-17636392 | None:intergenic | 30.0% | |
| ATAACATAGATTTCGGATTG+TGG | + | chr4.2:17634413-17634432 | MS.gene028318:intron | 30.0% | |
| ATAACGACGATTCTAATGAA+GGG | + | chr4.2:17636839-17636858 | MS.gene028318:CDS | 30.0% | |
| ATCTGGTAAGTATTCTGTAA+CGG | + | chr4.2:17633687-17633706 | MS.gene028318:intron | 30.0% | |
| ATTCCTTATCTAAACGAACA+AGG | - | chr4.2:17634382-17634401 | None:intergenic | 30.0% | |
| ATTGCTTGAATTTGTATGCT+TGG | + | chr4.2:17634742-17634761 | MS.gene028318:intron | 30.0% | |
| ATTGGTATTACATTAGTACC+AGG | + | chr4.2:17634316-17634335 | MS.gene028318:intron | 30.0% | |
| CAAAACCAGTGTAAAATATG+TGG | - | chr4.2:17634715-17634734 | None:intergenic | 30.0% | |
| CAAATCAAGTAGCATGAAAA+AGG | - | chr4.2:17636348-17636367 | None:intergenic | 30.0% | |
| CAGAGATACCAAATAGAAAA+TGG | - | chr4.2:17636560-17636579 | None:intergenic | 30.0% | |
| CCTTTACATGAAAACCATAA+TGG | + | chr4.2:17638301-17638320 | MS.gene028318:intron | 30.0% | |
| CTAATGTTTGTTCTGCATTA+AGG | + | chr4.2:17635858-17635877 | MS.gene028318:intron | 30.0% | |
| CTCTAATAAGGATACCAATA+GGG | - | chr4.2:17637612-17637631 | None:intergenic | 30.0% | |
| GATCAATGTTTGAATTCCTA+GGG | - | chr4.2:17636250-17636269 | None:intergenic | 30.0% | |
| GGAAAAAAAACAGAACTTGA+AGG | - | chr4.2:17635132-17635151 | None:intergenic | 30.0% | |
| GGACAACAAACATAAAACAA+CGG | + | chr4.2:17637476-17637495 | MS.gene028318:intron | 30.0% | |
| GGGTCTATTATTCTCTAATA+AGG | - | chr4.2:17637624-17637643 | None:intergenic | 30.0% | |
| GTACTTAGCAATTATACAAC+CGG | - | chr4.2:17634252-17634271 | None:intergenic | 30.0% | |
| GTATGAAACAACACGAAAAA+GGG | - | chr4.2:17634155-17634174 | None:intergenic | 30.0% | |
| TAACAATTCAAGTACATAGC+TGG | - | chr4.2:17633992-17634011 | None:intergenic | 30.0% | |
| TCATACAAGCATGAAATCAA+AGG | - | chr4.2:17635153-17635172 | None:intergenic | 30.0% | |
| TCTCTAATAAGGATACCAAT+AGG | - | chr4.2:17637613-17637632 | None:intergenic | 30.0% | |
| TGAACCTAAAACAGAAAAGA+GGG | - | chr4.2:17636792-17636811 | None:intergenic | 30.0% | |
| TGATATTCTAAGTGAACTGT+GGG | + | chr4.2:17637816-17637835 | MS.gene028318:intron | 30.0% | |
| TGCATGTTAAGATCTTTGAT+AGG | + | chr4.2:17636302-17636321 | MS.gene028318:intron | 30.0% | |
| TGTATGAAACAACACGAAAA+AGG | - | chr4.2:17634156-17634175 | None:intergenic | 30.0% | |
| TTATGGCTATGAAGTTACAT+AGG | + | chr4.2:17633831-17633850 | MS.gene028318:CDS | 30.0% | |
| TTGAACCTAAAACAGAAAAG+AGG | - | chr4.2:17636793-17636812 | None:intergenic | 30.0% | |
| TTTACAGCATTCCTTGTTAA+CGG | - | chr4.2:17638159-17638178 | None:intergenic | 30.0% | |
| TTTCTATTTGGTATCTCTGA+TGG | + | chr4.2:17636561-17636580 | MS.gene028318:intron | 30.0% | |
| TTTGTATAACATTTGTCGCA+TGG | + | chr4.2:17634286-17634305 | MS.gene028318:intron | 30.0% | |
| ! | ACAAATTCTGATAGTGAAGA+TGG | + | chr4.2:17637088-17637107 | MS.gene028318:CDS | 30.0% |
| ! | ATACAAGATATACTGGCTAT+GGG | + | chr4.2:17637206-17637225 | MS.gene028318:intron | 30.0% |
| ! | ATCCAATTGCATTTTCATCT+TGG | - | chr4.2:17638186-17638205 | None:intergenic | 30.0% |
| ! | ATTAAGGAATTTGGAATTGG+GGG | + | chr4.2:17635725-17635744 | MS.gene028318:intron | 30.0% |
| ! | CCATTATGGTTTTCATGTAA+AGG | - | chr4.2:17638304-17638323 | None:intergenic | 30.0% |
| ! | TCCAATTGCATTTTCATCTT+GGG | - | chr4.2:17638185-17638204 | None:intergenic | 30.0% |
| ! | TTTTCTTGCCATCAAAACTA+TGG | + | chr4.2:17633612-17633631 | MS.gene028318:CDS | 30.0% |
| !! | ATGGTGTTAATTTGATTTGC+AGG | + | chr4.2:17638320-17638339 | MS.gene028318:intron | 30.0% |
| !! | ATGTTTGTTGTCCTGTAAAT+GGG | - | chr4.2:17637469-17637488 | None:intergenic | 30.0% |
| !! | TATGTTTGTTGTCCTGTAAA+TGG | - | chr4.2:17637470-17637489 | None:intergenic | 30.0% |
| !! | TCTTCAAGTTTTTCAGAAAG+AGG | + | chr4.2:17635614-17635633 | MS.gene028318:CDS | 30.0% |
| !!! | AAAGATTTTGGGTTTGTCTT+TGG | + | chr4.2:17636737-17636756 | MS.gene028318:intron | 30.0% |
| !!! | CACATATTTTACACTGGTTT+TGG | + | chr4.2:17634713-17634732 | MS.gene028318:intron | 30.0% |
| !!! | CTTAAACTTGCTTTTTGGTT+TGG | + | chr4.2:17634661-17634680 | MS.gene028318:intron | 30.0% |
| AAAATTAAGGGACAAGACAC+AGG | - | chr4.2:17636128-17636147 | None:intergenic | 35.0% | |
| AAGGATAGACACAGGAATAT+AGG | + | chr4.2:17635877-17635896 | MS.gene028318:intron | 35.0% | |
| AAGGGACATAATACCATACA+AGG | - | chr4.2:17635113-17635132 | None:intergenic | 35.0% | |
| AATCATAACCAAGGTAGGTA+AGG | - | chr4.2:17633594-17633613 | None:intergenic | 35.0% | |
| AATTGGTACGTAGTATGTAC+TGG | + | chr4.2:17635389-17635408 | MS.gene028318:intron | 35.0% | |
| ACAATTCAAGTACATAGCTG+GGG | - | chr4.2:17633990-17634009 | None:intergenic | 35.0% | |
| ACACCTTGTTCGTTTAGATA+AGG | + | chr4.2:17634376-17634395 | MS.gene028318:intron | 35.0% | |
| ACATGAAAGTCATGGAAAAG+AGG | + | chr4.2:17637987-17638006 | MS.gene028318:CDS | 35.0% | |
| ACCAGTGTAAAATATGTGGA+AGG | - | chr4.2:17634711-17634730 | None:intergenic | 35.0% | |
| ACTTCATCCTAGTTTCGTAT+TGG | - | chr4.2:17637577-17637596 | None:intergenic | 35.0% | |
| AGAGAATAATAGACCCAATC+TGG | + | chr4.2:17637628-17637647 | MS.gene028318:intron | 35.0% | |
| AGATTTGAAGGTGAAAACAG+CGG | + | chr4.2:17638012-17638031 | MS.gene028318:CDS | 35.0% | |
| AGGAAGATATTCAAAGGGTA+TGG | + | chr4.2:17636959-17636978 | MS.gene028318:intron | 35.0% | |
| AGGAATTCTCACAAAGACAA+GGG | + | chr4.2:17638441-17638460 | MS.gene028318:CDS | 35.0% | |
| AGTCAACTGCTAGATATGTA+AGG | - | chr4.2:17635786-17635805 | None:intergenic | 35.0% | |
| ATAAAGCCTAGAAAGCAAGT+TGG | - | chr4.2:17637738-17637757 | None:intergenic | 35.0% | |
| ATTGTCTCAAAAACTGTCTC+TGG | - | chr4.2:17634807-17634826 | None:intergenic | 35.0% | |
| CAAAATGAGCAACTTTGCAT+TGG | - | chr4.2:17636496-17636515 | None:intergenic | 35.0% | |
| CAAAGTTCAAACCCATTTAC+AGG | + | chr4.2:17637455-17637474 | MS.gene028318:intron | 35.0% | |
| CAAATAGACTCATCTGTTAG+GGG | + | chr4.2:17637333-17637352 | MS.gene028318:intron | 35.0% | |
| CATGACTCTACTAAATACGA+TGG | + | chr4.2:17633562-17633581 | MS.gene028318:CDS | 35.0% | |
| CATGTAAAGGCTAGATAACA+AGG | - | chr4.2:17638291-17638310 | None:intergenic | 35.0% | |
| CCAGTGTAAAATATGTGGAA+GGG | - | chr4.2:17634710-17634729 | None:intergenic | 35.0% | |
| GAACCTAAAACAGAAAAGAG+GGG | - | chr4.2:17636791-17636810 | None:intergenic | 35.0% | |
| GATAACGACGATTCTAATGA+AGG | + | chr4.2:17636838-17636857 | MS.gene028318:CDS | 35.0% | |
| GCTCTTACATCTTTGCATTA+CGG | - | chr4.2:17635085-17635104 | None:intergenic | 35.0% | |
| GGATCAATGTTTGAATTCCT+AGG | - | chr4.2:17636251-17636270 | None:intergenic | 35.0% | |
| GGATTGTATATCTAGGCTTT+AGG | - | chr4.2:17637507-17637526 | None:intergenic | 35.0% | |
| GTGATATTCTAAGTGAACTG+TGG | + | chr4.2:17637815-17637834 | MS.gene028318:intron | 35.0% | |
| TAGGTCATCTCAAAATGCTA+AGG | + | chr4.2:17638467-17638486 | MS.gene028318:CDS | 35.0% | |
| TATTGGTATAATCATTCGGC+TGG | + | chr4.2:17634827-17634846 | MS.gene028318:CDS | 35.0% | |
| TCCCAAGATGAAAATGCAAT+TGG | + | chr4.2:17638181-17638200 | MS.gene028318:intron | 35.0% | |
| TCGGCTATCTTAAATTTCTG+TGG | - | chr4.2:17635257-17635276 | None:intergenic | 35.0% | |
| TGGCAAGAAAATCATAACCA+AGG | - | chr4.2:17633603-17633622 | None:intergenic | 35.0% | |
| TTACAGCATTCCTTGTTAAC+GGG | - | chr4.2:17638158-17638177 | None:intergenic | 35.0% | |
| TTCTTTACATTTGTCAGAGC+AGG | + | chr4.2:17637156-17637175 | MS.gene028318:CDS | 35.0% | |
| TTGTCTCAAAAACTGTCTCT+GGG | - | chr4.2:17634806-17634825 | None:intergenic | 35.0% | |
| TTTCTTCATCGTCAATCTAC+AGG | - | chr4.2:17635019-17635038 | None:intergenic | 35.0% | |
| TTTGCTTAGGACATTAGTGT+TGG | + | chr4.2:17637694-17637713 | MS.gene028318:intron | 35.0% | |
| ! | AACATGGCCCATTTTCTATT+TGG | + | chr4.2:17636549-17636568 | MS.gene028318:intron | 35.0% |
| ! | AAGATATTCAAAGGGTATGG+TGG | + | chr4.2:17636962-17636981 | MS.gene028318:intron | 35.0% |
| ! | ACAAGATTAGTCAACTCTGA+TGG | + | chr4.2:17634215-17634234 | MS.gene028318:intron | 35.0% |
| ! | ACATTAGTGTTGGAGAACTT+AGG | + | chr4.2:17637704-17637723 | MS.gene028318:intron | 35.0% |
| ! | ACCTCTCGAAAGATGATTTT+AGG | + | chr4.2:17633404-17633423 | MS.gene028318:CDS | 35.0% |
| ! | ATGAAACCATGTTTAGGATG+AGG | + | chr4.2:17637963-17637982 | MS.gene028318:intron | 35.0% |
| ! | CAATGCAAAGTTGCTCATTT+TGG | + | chr4.2:17636494-17636513 | MS.gene028318:intron | 35.0% |
| ! | CATACAAGATATACTGGCTA+TGG | + | chr4.2:17637205-17637224 | MS.gene028318:intron | 35.0% |
| ! | CCTCTCGAAAGATGATTTTA+GGG | + | chr4.2:17633405-17633424 | MS.gene028318:CDS | 35.0% |
| ! | GAGAACTGTTTGAGTTATCT+GGG | - | chr4.2:17636072-17636091 | None:intergenic | 35.0% |
| ! | TGAAACCATGTTTAGGATGA+GGG | + | chr4.2:17637964-17637983 | MS.gene028318:intron | 35.0% |
| !! | ATGTTTTAAGTAGTCACGCT+TGG | - | chr4.2:17633888-17633907 | None:intergenic | 35.0% |
| !! | CAAGTTTTTCAGAACCTTGT+AGG | - | chr4.2:17633521-17633540 | None:intergenic | 35.0% |
| !! | GTGTTAATTTGATTTGCAGG+AGG | + | chr4.2:17638323-17638342 | MS.gene028318:intron | 35.0% |
| !! | TGGCTTTGGTAAAAAAGATG+AGG | + | chr4.2:17636939-17636958 | MS.gene028318:CDS | 35.0% |
| !! | TGTGATTGATTTTCCGCAAA+TGG | + | chr4.2:17635046-17635065 | MS.gene028318:CDS | 35.0% |
| !! | TTGTATATCTAGGCTTTAGG+TGG | - | chr4.2:17637504-17637523 | None:intergenic | 35.0% |
| !!! | AAGGTTTTGGGTATTTGCTT+AGG | + | chr4.2:17637681-17637700 | MS.gene028318:intron | 35.0% |
| !!! | TTTTTTGTGGCTTTTACCTC+TGG | + | chr4.2:17634973-17634992 | MS.gene028318:intron | 35.0% |
| AAGAGTTGAGTAAGGCTTAG+TGG | - | chr4.2:17634463-17634482 | None:intergenic | 40.0% | |
| AATTCCTAGGGATAAGACAC+AGG | - | chr4.2:17636238-17636257 | None:intergenic | 40.0% | |
| AATTCTCACAAAGACAAGGG+TGG | + | chr4.2:17638444-17638463 | MS.gene028318:CDS | 40.0% | |
| ACGAACAAGGTGTAAAAGCA+AGG | - | chr4.2:17634369-17634388 | None:intergenic | 40.0% | |
| ACTCGCTGGATTGTATATCT+AGG | - | chr4.2:17637514-17637533 | None:intergenic | 40.0% | |
| ACTGGATGTGAGATTAAGTG+TGG | + | chr4.2:17637784-17637803 | MS.gene028318:intron | 40.0% | |
| ATTCCTTAACATGTGCCCTT+AGG | + | chr4.2:17636517-17636536 | MS.gene028318:intron | 40.0% | |
| ATTCCTTGTTAACGGGGATA+CGG | - | chr4.2:17638151-17638170 | None:intergenic | 40.0% | |
| CAAATTCTTTAAGCGCAGCA+AGG | - | chr4.2:17633943-17633962 | None:intergenic | 40.0% | |
| CAAGTAGCATGAAAAAGGCA+AGG | - | chr4.2:17636343-17636362 | None:intergenic | 40.0% | |
| CAGGAATTCTCACAAAGACA+AGG | + | chr4.2:17638440-17638459 | MS.gene028318:CDS | 40.0% | |
| CATCGTCAATCTACAGGAAA+CGG | - | chr4.2:17635013-17635032 | None:intergenic | 40.0% | |
| CCCTAAAATCATCTTTCGAG+AGG | - | chr4.2:17633408-17633427 | None:intergenic | 40.0% | |
| CGAACAAGGTGTAAAAGCAA+GGG | - | chr4.2:17634368-17634387 | None:intergenic | 40.0% | |
| CTGGATGTGAGATTAAGTGT+GGG | + | chr4.2:17637785-17637804 | MS.gene028318:intron | 40.0% | |
| CTTGTCTTTGTGAGAATTCC+TGG | - | chr4.2:17638442-17638461 | None:intergenic | 40.0% | |
| GATATACAATCCAGCGAGTT+AGG | + | chr4.2:17637515-17637534 | MS.gene028318:intron | 40.0% | |
| GCTATGAAGTTACATAGGCT+TGG | + | chr4.2:17633836-17633855 | MS.gene028318:CDS | 40.0% | |
| GGAAAAGAGGAGAGATTTGA+AGG | + | chr4.2:17638000-17638019 | MS.gene028318:CDS | 40.0% | |
| GGGCAAATTATCAAGACAAC+TGG | - | chr4.2:17636771-17636790 | None:intergenic | 40.0% | |
| GTAAAATATGTGGAAGGGAG+TGG | - | chr4.2:17634705-17634724 | None:intergenic | 40.0% | |
| GTAAGAGCTTCTTCCTTGTA+TGG | + | chr4.2:17635097-17635116 | MS.gene028318:intron | 40.0% | |
| GTCAAAAAGCTCATCCCTAT+TGG | + | chr4.2:17637595-17637614 | MS.gene028318:intron | 40.0% | |
| GTTTCTCATGCCCAATTCAA+CGG | - | chr4.2:17633440-17633459 | None:intergenic | 40.0% | |
| TACAGCATTCCTTGTTAACG+GGG | - | chr4.2:17638157-17638176 | None:intergenic | 40.0% | |
| TCATCCTAGTTTCGTATTGG+AGG | - | chr4.2:17637574-17637593 | None:intergenic | 40.0% | |
| TCGTATTGGAGGTGGTATTT+GGG | - | chr4.2:17637563-17637582 | None:intergenic | 40.0% | |
| TCTGCATTAAGGATAGACAC+AGG | + | chr4.2:17635869-17635888 | MS.gene028318:intron | 40.0% | |
| TGAAAACAGCGGATCTGAAA+AGG | + | chr4.2:17638023-17638042 | MS.gene028318:CDS | 40.0% | |
| TGTAAAAGCAAGGGACAGAA+TGG | - | chr4.2:17634359-17634378 | None:intergenic | 40.0% | |
| TGTTCGTGAATTTCACTGCT+TGG | + | chr4.2:17635666-17635685 | MS.gene028318:intron | 40.0% | |
| TTCAAATGCAAATGAGCAGC+TGG | + | chr4.2:17638490-17638509 | MS.gene028318:CDS | 40.0% | |
| TTCCTTAACATGTGCCCTTA+GGG | + | chr4.2:17636518-17636537 | MS.gene028318:intron | 40.0% | |
| TTCGTATTGGAGGTGGTATT+TGG | - | chr4.2:17637564-17637583 | None:intergenic | 40.0% | |
| TTGCTAAGTACTCTTAGGGA+TGG | + | chr4.2:17634261-17634280 | MS.gene028318:intron | 40.0% | |
| TTGTCGCATGGTCTATGAAT+TGG | + | chr4.2:17634298-17634317 | MS.gene028318:intron | 40.0% | |
| ! | ACTGCTTGGTTTGAGAAGAA+TGG | + | chr4.2:17635680-17635699 | MS.gene028318:intron | 40.0% |
| ! | CCCTTCCACATATTTTACAC+TGG | + | chr4.2:17634707-17634726 | MS.gene028318:intron | 40.0% |
| ! | CGATCAAAGTACCTGAAACA+AGG | - | chr4.2:17635580-17635599 | None:intergenic | 40.0% |
| ! | CTGCTTGGTTTGAGAAGAAT+GGG | + | chr4.2:17635681-17635700 | MS.gene028318:intron | 40.0% |
| ! | CTTGCTTTCTAGGCTTTATG+AGG | + | chr4.2:17637739-17637758 | MS.gene028318:intron | 40.0% |
| ! | GATATACTGGCTATGGGAAA+TGG | + | chr4.2:17637212-17637231 | MS.gene028318:intron | 40.0% |
| ! | GGAGAACTGTTTGAGTTATC+TGG | - | chr4.2:17636073-17636092 | None:intergenic | 40.0% |
| ! | GGATATCCAACTTGCTTTCT+AGG | + | chr4.2:17637729-17637748 | MS.gene028318:intron | 40.0% |
| ! | GTTTGAGTTATCTGGGAAAG+AGG | - | chr4.2:17636065-17636084 | None:intergenic | 40.0% |
| ! | TAGTGTTGGAGAACTTAGGA+AGG | + | chr4.2:17637708-17637727 | MS.gene028318:intron | 40.0% |
| ! | TCTGATGGTGTTGGATATTC+CGG | + | chr4.2:17634230-17634249 | MS.gene028318:intron | 40.0% |
| ! | TGATAGTGAAGATGGTGACT+TGG | + | chr4.2:17637096-17637115 | MS.gene028318:CDS | 40.0% |
| ! | TTAGTCAACTCTGATGGTGT+TGG | + | chr4.2:17634221-17634240 | MS.gene028318:intron | 40.0% |
| ! | TTGCCCCTCTTTTCTGTTTT+AGG | + | chr4.2:17636785-17636804 | MS.gene028318:intron | 40.0% |
| ! | TTTGAGGTTGCTGATGAAGA+TGG | + | chr4.2:17633803-17633822 | MS.gene028318:CDS | 40.0% |
| !! | ATTCTTTTCCAACGCCGATT+TGG | - | chr4.2:17633669-17633688 | None:intergenic | 40.0% |
| !! | ATTTGATTTGCAGGAGGAAG+TGG | + | chr4.2:17638329-17638348 | MS.gene028318:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr4.2:17636535-17636554 | None:intergenic | 40.0% |
| !! | GACTTGGTGAGAAATCTGAA+TGG | + | chr4.2:17637112-17637131 | MS.gene028318:CDS | 40.0% |
| !! | TTTGATTTGCAGGAGGAAGT+GGG | + | chr4.2:17638330-17638349 | MS.gene028318:intron | 40.0% |
| !!! | CAGTGCTGGTTTTCTAGATA+AGG | + | chr4.2:17636903-17636922 | MS.gene028318:CDS | 40.0% |
| AAATATGTGGAAGGGAGTGG+TGG | - | chr4.2:17634702-17634721 | None:intergenic | 45.0% | |
| ACATGGATTTCCTGTTCCAG+AGG | + | chr4.2:17634067-17634086 | MS.gene028318:CDS | 45.0% | |
| ACCACCTCCAATACGAAACT+AGG | + | chr4.2:17637567-17637586 | MS.gene028318:intron | 45.0% | |
| CAAACATTAGACGGCACAGA+AGG | - | chr4.2:17635848-17635867 | None:intergenic | 45.0% | |
| CATAACCAAGGTAGGTAAGG+CGG | - | chr4.2:17633591-17633610 | None:intergenic | 45.0% | |
| CATATTCGGGTCACCAGATT+GGG | - | chr4.2:17637644-17637663 | None:intergenic | 45.0% | |
| CATGTCCCTCATCCTAAACA+TGG | - | chr4.2:17637972-17637991 | None:intergenic | 45.0% | |
| CCTTAGGGCACAAGTTAACA+TGG | + | chr4.2:17636533-17636552 | MS.gene028318:intron | 45.0% | |
| CGATTCTAATGAAGGGAGAG+AGG | + | chr4.2:17636846-17636865 | MS.gene028318:CDS | 45.0% | |
| GACATGTTCTTTGCTTGAGC+AGG | + | chr4.2:17634034-17634053 | MS.gene028318:intron | 45.0% | |
| GATGAGGGACATGAAAGTCA+TGG | + | chr4.2:17637979-17637998 | MS.gene028318:CDS | 45.0% | |
| GCACTTACAGAGGATAACCT+TGG | - | chr4.2:17634133-17634152 | None:intergenic | 45.0% | |
| GGTTTGAGAAGAATGGGAGA+GGG | + | chr4.2:17635687-17635706 | MS.gene028318:intron | 45.0% | |
| GTCAGATCTCAAGCATATCC+TGG | - | chr4.2:17634337-17634356 | None:intergenic | 45.0% | |
| GTTATCTGGGAAAGAGGAGA+TGG | - | chr4.2:17636059-17636078 | None:intergenic | 45.0% | |
| GTTTGAGAAGAATGGGAGAG+GGG | + | chr4.2:17635688-17635707 | MS.gene028318:intron | 45.0% | |
| TAATGCTGACAAGTGCACAC+AGG | - | chr4.2:17634914-17634933 | None:intergenic | 45.0% | |
| TAGTCCTGTGTCTTATCCCT+AGG | + | chr4.2:17636231-17636250 | MS.gene028318:intron | 45.0% | |
| TCATATTCGGGTCACCAGAT+TGG | - | chr4.2:17637645-17637664 | None:intergenic | 45.0% | |
| TCCTAGTTTCGTATTGGAGG+TGG | - | chr4.2:17637571-17637590 | None:intergenic | 45.0% | |
| TCCTTAACATGTGCCCTCAA+GGG | - | chr4.2:17636404-17636423 | None:intergenic | 45.0% | |
| TCTGCAGTTTATTGAAGGCG+AGG | + | chr4.2:17637054-17637073 | MS.gene028318:intron | 45.0% | |
| TCTTCAATAGACAGCAGTGC+TGG | + | chr4.2:17636889-17636908 | MS.gene028318:CDS | 45.0% | |
| TGCTATAGCATCAGCTCGTA+GGG | + | chr4.2:17638398-17638417 | MS.gene028318:CDS | 45.0% | |
| TGGTTTGAGAAGAATGGGAG+AGG | + | chr4.2:17635686-17635705 | MS.gene028318:intron | 45.0% | |
| TTACCGTATCCCCGTTAACA+AGG | + | chr4.2:17638145-17638164 | MS.gene028318:intron | 45.0% | |
| TTCCTTAACATGTGCCCTCA+AGG | - | chr4.2:17636405-17636424 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.2:17635280-17635299 | None:intergenic | 45.0% |
| ! | AATGCTAACTTGTGCCCTTG+AGG | + | chr4.2:17636387-17636406 | MS.gene028318:intron | 45.0% |
| ! | ATCGGCGTTGGAAAAGAATC+TGG | + | chr4.2:17633670-17633689 | MS.gene028318:CDS | 45.0% |
| ! | ATGCTAACTTGTGCCCTTGA+GGG | + | chr4.2:17636388-17636407 | MS.gene028318:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.2:17635281-17635300 | None:intergenic | 45.0% |
| ! | CATGTTTGAGACGAGCGATT+CGG | - | chr4.2:17633492-17633511 | None:intergenic | 45.0% |
| ! | GTAATCATGTCGCTTGTCCA+AGG | + | chr4.2:17634113-17634132 | MS.gene028318:CDS | 45.0% |
| !! | ACGAAAAAGGGCACTTACAG+AGG | - | chr4.2:17634143-17634162 | None:intergenic | 45.0% |
| !! | ATTTGGGAAGAGTACCATCG+AGG | - | chr4.2:17637547-17637566 | None:intergenic | 45.0% |
| !! | CCATGTTAACTTGTGCCCTA+AGG | - | chr4.2:17636536-17636555 | None:intergenic | 45.0% |
| !! | GATAAGGAACTTGCTGCTAG+TGG | + | chr4.2:17636919-17636938 | MS.gene028318:CDS | 45.0% |
| !! | TTATATTTCATAATTTAATT+AGG | - | chr4.2:17634525-17634544 | None:intergenic | 5.0% |
| !!! | TAATTTCTATTATTTTTATT+AGG | + | chr4.2:17638069-17638088 | MS.gene028318:intron | 5.0% |
| AAAGGAAGAGGCAAGCGACA+CGG | + | chr4.2:17638041-17638060 | MS.gene028318:CDS | 50.0% | |
| AAGAGGAGATGGAGGAAAGG+AGG | - | chr4.2:17636048-17636067 | None:intergenic | 50.0% | |
| AATGAAGGGAGAGAGGAAGC+TGG | + | chr4.2:17636853-17636872 | MS.gene028318:CDS | 50.0% | |
| AGAGGAGATGGAGGAAAGGA+GGG | - | chr4.2:17636047-17636066 | None:intergenic | 50.0% | |
| ATCATTCGGCTGGCAGAACA+TGG | + | chr4.2:17634837-17634856 | MS.gene028318:CDS | 50.0% | |
| ATCGCTCGTCTCAAACATGG+TGG | + | chr4.2:17633493-17633512 | MS.gene028318:CDS | 50.0% | |
| ATCTGGGAAAGAGGAGATGG+AGG | - | chr4.2:17636056-17636075 | None:intergenic | 50.0% | |
| ATTCGGTCGATGAGTTCAGC+GGG | - | chr4.2:17633475-17633494 | None:intergenic | 50.0% | |
| ATTTCCTGTTCCAGAGGCTG+TGG | + | chr4.2:17634073-17634092 | MS.gene028318:CDS | 50.0% | |
| CAAACATGGTGGCACCTACA+AGG | + | chr4.2:17633504-17633523 | MS.gene028318:CDS | 50.0% | |
| CAATCCAGCGAGTTAGGACA+AGG | + | chr4.2:17637521-17637540 | MS.gene028318:intron | 50.0% | |
| CAGCGGATCTGAAAAGGAAG+AGG | + | chr4.2:17638029-17638048 | MS.gene028318:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.2:17635279-17635298 | MS.gene028318:intron | 50.0% | |
| CGAATCGCTCGTCTCAAACA+TGG | + | chr4.2:17633490-17633509 | MS.gene028318:CDS | 50.0% | |
| CGATTATGTTCCACAGCCTC+TGG | - | chr4.2:17634086-17634105 | None:intergenic | 50.0% | |
| CTCACAAAGACAAGGGTGGT+AGG | + | chr4.2:17638448-17638467 | MS.gene028318:CDS | 50.0% | |
| CTGGTGACCCGAATATGACA+CGG | + | chr4.2:17637647-17637666 | MS.gene028318:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4.2:17635276-17635295 | None:intergenic | 50.0% | |
| GACGGAAGAAACTTGGATCC+AGG | + | chr4.2:17638421-17638440 | MS.gene028318:CDS | 50.0% | |
| GAGCAGGCTTTGCAAACACA+TGG | + | chr4.2:17634050-17634069 | MS.gene028318:intron | 50.0% | |
| GCAGTTTATTGAAGGCGAGG+TGG | + | chr4.2:17637057-17637076 | MS.gene028318:intron | 50.0% | |
| GCTATAGCATCAGCTCGTAG+GGG | + | chr4.2:17638399-17638418 | MS.gene028318:CDS | 50.0% | |
| GGAAAGAGGAGATGGAGGAA+AGG | - | chr4.2:17636051-17636070 | None:intergenic | 50.0% | |
| GGAGTCAGATTGTAAGCCAG+AGG | - | chr4.2:17634992-17635011 | None:intergenic | 50.0% | |
| GGCATCAGCAGTTTGCAGAA+AGG | - | chr4.2:17637363-17637382 | None:intergenic | 50.0% | |
| GTGCTATAGCATCAGCTCGT+AGG | + | chr4.2:17638397-17638416 | MS.gene028318:CDS | 50.0% | |
| GTTCAGCGGGGACAATTTCA+TGG | - | chr4.2:17633462-17633481 | None:intergenic | 50.0% | |
| GTTCTCACCGCCGTTGAATT+GGG | + | chr4.2:17633427-17633446 | MS.gene028318:CDS | 50.0% | |
| GTTCTGCAAATGCAGCGTTC+AGG | + | chr4.2:17634764-17634783 | MS.gene028318:intron | 50.0% | |
| TCTCATGCCCAATTCAACGG+CGG | - | chr4.2:17633437-17633456 | None:intergenic | 50.0% | |
| TGCGACACAGACACCATTTG+CGG | - | chr4.2:17635062-17635081 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.2:17635282-17635301 | None:intergenic | 50.0% |
| ! | GATTCGGTCGATGAGTTCAG+CGG | - | chr4.2:17633476-17633495 | None:intergenic | 50.0% |
| ! | TGCCCTAAGGGCACATGTTA+AGG | - | chr4.2:17636523-17636542 | None:intergenic | 50.0% |
| !! | AAAGGTGTCTTCGTCTCCGT+TGG | + | chr4.2:17633640-17633659 | MS.gene028318:CDS | 50.0% |
| !! | GAACTTGCTGCTAGTGGCTT+TGG | + | chr4.2:17636925-17636944 | MS.gene028318:CDS | 50.0% |
| AGATAGCCGACCCCACTTAG+TGG | + | chr4.2:17635267-17635286 | MS.gene028318:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4.2:17635274-17635293 | MS.gene028318:intron | 55.0% | |
| CGTAGGGGACGGAAGAAACT+TGG | + | chr4.2:17638414-17638433 | MS.gene028318:CDS | 55.0% | |
| GAGTTAGGACAAGGCCTCGA+TGG | + | chr4.2:17637530-17637549 | MS.gene028318:intron | 55.0% | |
| GATAGCCGACCCCACTTAGT+GGG | + | chr4.2:17635268-17635287 | MS.gene028318:intron | 55.0% | |
| GGATTCCGCCTTACCTACCT+TGG | + | chr4.2:17633583-17633602 | MS.gene028318:CDS | 55.0% | |
| GGTTCTCACCGCCGTTGAAT+TGG | + | chr4.2:17633426-17633445 | MS.gene028318:CDS | 55.0% | |
| GTCTCCGTTGGTCGCCAAAT+CGG | + | chr4.2:17633652-17633671 | MS.gene028318:CDS | 55.0% | |
| TAGCATCAGCTCGTAGGGGA+CGG | + | chr4.2:17638403-17638422 | MS.gene028318:CDS | 55.0% | |
| TTCGGTCGATGAGTTCAGCG+GGG | - | chr4.2:17633474-17633493 | None:intergenic | 55.0% | |
| ! | GCCCTTGAGGGCACATGTTA+AGG | + | chr4.2:17636400-17636419 | MS.gene028318:intron | 55.0% |
| !! | AACGCCGATTTGGCGACCAA+CGG | - | chr4.2:17633659-17633678 | None:intergenic | 55.0% |
| !! | TGTTCCACAGCCTCTGGAAC+AGG | - | chr4.2:17634080-17634099 | None:intergenic | 55.0% |
| GTTGGTCGCCAAATCGGCGT+TGG | + | chr4.2:17633658-17633677 | MS.gene028318:CDS | 60.0% | |
| ! | GAGGCCTTGTCCTAACTCGC+TGG | - | chr4.2:17637528-17637547 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 17633376 | 17638515 | 17633376 | ID=MS.gene028318 |
| chr4.2 | mRNA | 17633376 | 17638515 | 17633376 | ID=MS.gene028318.t1;Parent=MS.gene028318 |
| chr4.2 | exon | 17633376 | 17633691 | 17633376 | ID=MS.gene028318.t1.exon1;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17633376 | 17633691 | 17633376 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17633798 | 17633973 | 17633798 | ID=MS.gene028318.t1.exon2;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17633798 | 17633973 | 17633798 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17634056 | 17634144 | 17634056 | ID=MS.gene028318.t1.exon3;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17634056 | 17634144 | 17634056 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17634779 | 17634896 | 17634779 | ID=MS.gene028318.t1.exon4;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17634779 | 17634896 | 17634779 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17635023 | 17635096 | 17635023 | ID=MS.gene028318.t1.exon5;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17635023 | 17635096 | 17635023 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17635588 | 17635635 | 17635588 | ID=MS.gene028318.t1.exon6;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17635588 | 17635635 | 17635588 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17636807 | 17636975 | 17636807 | ID=MS.gene028318.t1.exon7;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17636807 | 17636975 | 17636807 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17637061 | 17637177 | 17637061 | ID=MS.gene028318.t1.exon8;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17637061 | 17637177 | 17637061 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17637979 | 17638062 | 17637979 | ID=MS.gene028318.t1.exon9;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17637979 | 17638062 | 17637979 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| chr4.2 | exon | 17638342 | 17638515 | 17638342 | ID=MS.gene028318.t1.exon10;Parent=MS.gene028318.t1 |
| chr4.2 | CDS | 17638342 | 17638515 | 17638342 | ID=cds.MS.gene028318.t1;Parent=MS.gene028318.t1 |
| Gene Sequence |
| Protein sequence |
