Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048301.t1 | AES64635.2 | 96.1 | 984 | 38 | 0 | 1 | 984 | 1 | 984 | 0.00E+00 | 1861.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048301.t1 | Q9XIK4 | 67.5 | 1005 | 298 | 9 | 1 | 979 | 1 | 1002 | 0.0e+00 | 1296.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048301.t1 | G7ISQ3 | 96.1 | 984 | 38 | 0 | 1 | 984 | 1 | 984 | 0.0e+00 | 1861.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048301.t1 | MTR_2g028030 | 95.721 | 1005 | 42 | 1 | 1 | 1004 | 1 | 1005 | 0.0 | 1986 |
MS.gene048301.t1 | MTR_8g092060 | 75.388 | 1032 | 224 | 9 | 1 | 1005 | 1 | 1029 | 0.0 | 1549 |
MS.gene048301.t1 | MTR_2g449880 | 76.190 | 42 | 10 | 0 | 634 | 675 | 32 | 73 | 1.60e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene048301.t1 | AT1G10490 | 66.634 | 1031 | 315 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1331 |
MS.gene048301.t1 | AT1G10490 | 66.634 | 1031 | 315 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1331 |
MS.gene048301.t1 | AT3G57940 | 68.526 | 950 | 286 | 5 | 1 | 938 | 1 | 949 | 0.0 | 1294 |
MS.gene048301.t1 | AT3G57940 | 68.211 | 950 | 284 | 6 | 1 | 938 | 1 | 944 | 0.0 | 1281 |
Find 184 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCATCAAGTTGTTCTTTA+AGG | 0.094886 | 2.3:-61563966 | None:intergenic |
TGATTCTTTCAGTAGCTTTA+TGG | 0.119567 | 2.3:-61564997 | None:intergenic |
CTTGGTGGAGCCTGTATTTC+AGG | 0.125854 | 2.3:-61568061 | None:intergenic |
ATTGAGGAAGAGGGGTTTAT+TGG | 0.178337 | 2.3:+61563023 | MS.gene048301:CDS |
CATTACATTGGTGTCTCATT+TGG | 0.200504 | 2.3:+61568889 | MS.gene048301:CDS |
AAAAGCTGTTGTCACATTTA+TGG | 0.211036 | 2.3:+61564131 | MS.gene048301:CDS |
AAAATTCTGGGTAGTACTTT+TGG | 0.212769 | 2.3:+61563123 | MS.gene048301:CDS |
AATAACTCGTTGTTTGTATA+AGG | 0.235420 | 2.3:+61563092 | MS.gene048301:CDS |
GAAGACAGGAAGACTAAATA+TGG | 0.250031 | 2.3:-61565287 | None:intergenic |
TTCCTGTCTTCTACTGTTAA+TGG | 0.250402 | 2.3:+61565299 | MS.gene048301:CDS |
CTTTAATTTCAGCTTGGTTA+TGG | 0.254393 | 2.3:+61567090 | MS.gene048301:intron |
GTTGTTCTTTAAGGTTCTTC+AGG | 0.268516 | 2.3:-61563957 | None:intergenic |
GGAACCTCTTAGTGTATCTT+TGG | 0.274563 | 2.3:+61571016 | MS.gene048301:CDS |
GAATGTTGATTCGATCTTCT+TGG | 0.294677 | 2.3:-61570773 | None:intergenic |
ATGTTCAAACCTTGGTAAAA+TGG | 0.303520 | 2.3:-61569179 | None:intergenic |
TAAGGATTCAGACAAAATTC+TGG | 0.306572 | 2.3:+61563110 | MS.gene048301:CDS |
ACATCAGAGGGCACTGATTC+TGG | 0.315070 | 2.3:+61565511 | MS.gene048301:CDS |
GCTCTTGGTTTATCTATTGC+TGG | 0.316573 | 2.3:+61564228 | MS.gene048301:CDS |
ATTACATTGGTGTCTCATTT+GGG | 0.317586 | 2.3:+61568890 | MS.gene048301:CDS |
ATTCAGTTCGAAATCTTTCA+TGG | 0.322534 | 2.3:-61563542 | None:intergenic |
TCCTGTCTTCTACTGTTAAT+GGG | 0.330482 | 2.3:+61565300 | MS.gene048301:CDS |
AGAAATAACCTGCTAAGATT+AGG | 0.335625 | 2.3:-61565807 | None:intergenic |
CCAATGTAATGAAGCTTCTC+TGG | 0.343452 | 2.3:-61568877 | None:intergenic |
GTAATGTGATGCAACATATA+AGG | 0.350439 | 2.3:-61566095 | None:intergenic |
GACATCAGCTGTAGATCATT+TGG | 0.350952 | 2.3:-61566127 | None:intergenic |
AAGTTTCACTCCACTCCTAA+TGG | 0.353131 | 2.3:-61571304 | None:intergenic |
CTGGCGATCCCATTGAAAAC+TGG | 0.354899 | 2.3:+61565745 | MS.gene048301:CDS |
AAGTGCTGTTGTTGCCTTGT+TGG | 0.361862 | 2.3:+61564179 | MS.gene048301:CDS |
CACCACTTATTTGTACTACT+TGG | 0.363582 | 2.3:+61566163 | MS.gene048301:CDS |
TGATTCTTTGATTCATCAAC+AGG | 0.363807 | 2.3:-61566285 | None:intergenic |
TTGCATTGGTCTGCAAAATC+AGG | 0.367543 | 2.3:+61570305 | MS.gene048301:CDS |
CTTGAAAATACAAATGAGTA+AGG | 0.369749 | 2.3:-61570236 | None:intergenic |
ATCTTCCACGTTTCGTGGCA+TGG | 0.386368 | 2.3:+61569311 | MS.gene048301:CDS |
TTGCTGGAGCCGTTGCTGTT+GGG | 0.386520 | 2.3:+61564244 | MS.gene048301:CDS |
CGACTAAAGGCTTATGTTGA+TGG | 0.386670 | 2.3:+61569725 | MS.gene048301:CDS |
TGGATTACAAGCTTGCTATA+AGG | 0.393819 | 2.3:+61569331 | MS.gene048301:CDS |
CTTCTATCTTCCACGTTTCG+TGG | 0.394509 | 2.3:+61569306 | MS.gene048301:CDS |
TACCTATTTCATCTCACATA+AGG | 0.396827 | 2.3:+61563661 | MS.gene048301:CDS |
TAGAAAACTTAACTGGAATC+TGG | 0.397069 | 2.3:-61568972 | None:intergenic |
GTGAAGGAAAATTTGTGTCT+TGG | 0.397805 | 2.3:-61566943 | None:intergenic |
TACATACAGGTTTGTCTTGA+GGG | 0.398420 | 2.3:+61566830 | MS.gene048301:intron |
GCTCTCGCAAGTTGAATTGT+TGG | 0.401328 | 2.3:+61565211 | MS.gene048301:CDS |
AATGATGAAATTGAAGTTGA+TGG | 0.405431 | 2.3:+61569131 | MS.gene048301:CDS |
TGGATGACGCACAAAATATC+AGG | 0.406769 | 2.3:-61566312 | None:intergenic |
GAAATAACCTGCTAAGATTA+GGG | 0.409631 | 2.3:-61565806 | None:intergenic |
TCTGCAGCTTCTGTAACTCT+TGG | 0.415583 | 2.3:-61568079 | None:intergenic |
TTGCAAGGCATGTGTGTTCA+TGG | 0.416518 | 2.3:+61563620 | MS.gene048301:CDS |
TTTAATTCAATAGGGACAAA+TGG | 0.416536 | 2.3:+61570672 | MS.gene048301:intron |
GACCTTATGTGAGATGAAAT+AGG | 0.418137 | 2.3:-61563663 | None:intergenic |
CGAGGGAAATCAGCTGCTCT+TGG | 0.418892 | 2.3:+61564213 | MS.gene048301:CDS |
TTGTTGGCTGCTCGTGGCCG+AGG | 0.420581 | 2.3:+61564195 | MS.gene048301:CDS |
ATTGTTCGTGCTAGGAGATT+AGG | 0.422097 | 2.3:-61563287 | None:intergenic |
AGCAGTGGTCGTCAACCATT+TGG | 0.423050 | 2.3:+61566887 | MS.gene048301:CDS |
GTGATTTATACTATGTCAAT+CGG | 0.424115 | 2.3:+61565925 | MS.gene048301:CDS |
GACGACCACTGCTCAAACTC+TGG | 0.424946 | 2.3:-61566877 | None:intergenic |
TCAATATCCATCTCAGAGAT+AGG | 0.427542 | 2.3:-61568037 | None:intergenic |
AGGTCCATGTTTGTCATCAT+TGG | 0.430880 | 2.3:+61562312 | MS.gene048301:CDS |
GACGGTTGAGGGAGGAGGTC+TGG | 0.430882 | 2.3:+61563313 | MS.gene048301:CDS |
GAATCCATCAGATATGCTTC+TGG | 0.434652 | 2.3:+61565726 | MS.gene048301:CDS |
GAATCACACACGGAGGCCAC+TGG | 0.437897 | 2.3:+61563561 | MS.gene048301:CDS |
GCACCACAGACAGACAATTC+AGG | 0.439083 | 2.3:+61565030 | MS.gene048301:CDS |
TTATTGCTGTGAAAGCCATT+AGG | 0.453352 | 2.3:+61571289 | MS.gene048301:CDS |
AGTACCTCATTGACAGAAAC+CGG | 0.455246 | 2.3:-61563693 | None:intergenic |
ATCAGTGCCCTCTGATGTCT+TGG | 0.457793 | 2.3:-61565506 | None:intergenic |
CATGGAATTTGATCGCCAAA+TGG | 0.460355 | 2.3:-61566902 | None:intergenic |
GCTTCTGTGTTACTTTGCAT+TGG | 0.464108 | 2.3:+61570291 | MS.gene048301:CDS |
GCAGCTTCTGTAACTCTTGG+TGG | 0.467911 | 2.3:-61568076 | None:intergenic |
CCTGTAGTGAAGTCTTTGCT+TGG | 0.468559 | 2.3:+61565263 | MS.gene048301:CDS |
TGTAAAACAGACTCAAAGTC+AGG | 0.473602 | 2.3:-61571234 | None:intergenic |
AAAATACAAATGAGTAAGGA+TGG | 0.474098 | 2.3:-61570232 | None:intergenic |
GACTGGATTTGATCTGTGCC+TGG | 0.476341 | 2.3:-61562832 | None:intergenic |
GGATATTGAACCTGAAATAC+AGG | 0.477216 | 2.3:+61568051 | MS.gene048301:CDS |
TTTATCTGCACTTGACTACA+AGG | 0.477413 | 2.3:+61564424 | MS.gene048301:CDS |
GAAGTGTTGCACAATGGATC+AGG | 0.478725 | 2.3:+61564014 | MS.gene048301:CDS |
TTACATACAGGTTTGTCTTG+AGG | 0.480191 | 2.3:+61566829 | MS.gene048301:intron |
TACATGTTGGACCATTGATC+AGG | 0.480671 | 2.3:+61563992 | MS.gene048301:CDS |
GAAATTACCCTCATGGCACT+TGG | 0.481815 | 2.3:-61567001 | None:intergenic |
ATTGCTGGAGCCGTTGCTGT+TGG | 0.482794 | 2.3:+61564243 | MS.gene048301:CDS |
AATTGCTCACAGAATTTCCA+TGG | 0.484074 | 2.3:-61566920 | None:intergenic |
CACAAATGGATCAGCTCTAT+CGG | 0.484503 | 2.3:-61563049 | None:intergenic |
AAGGATTCAGACAAAATTCT+GGG | 0.485701 | 2.3:+61563111 | MS.gene048301:CDS |
TTTACACTGGACAGTTATGA+AGG | 0.489444 | 2.3:+61565421 | MS.gene048301:intron |
AAATTTAAGCTTCCTCCAAA+AGG | 0.493708 | 2.3:-61568932 | None:intergenic |
TATCTTTGTGATAAGAAAAG+AGG | 0.495526 | 2.3:-61565953 | None:intergenic |
GGGGCAGATATCTTGTCATT+CGG | 0.497781 | 2.3:+61566850 | MS.gene048301:CDS |
TGTAAAGCTGACAATTCAAC+CGG | 0.500346 | 2.3:-61570267 | None:intergenic |
CTTGATGAAACTTTACATGT+TGG | 0.500629 | 2.3:+61563979 | MS.gene048301:CDS |
TGATAATTTATCCAGGATCA+TGG | 0.501330 | 2.3:+61569616 | MS.gene048301:intron |
AGTACAAATAAGTGGTGTGC+TGG | 0.505222 | 2.3:-61566157 | None:intergenic |
GACTGGTGAGCATTCATGTA+TGG | 0.506125 | 2.3:+61569091 | MS.gene048301:CDS |
CTTGTTTAGCTGCATTATTG+AGG | 0.507282 | 2.3:-61571046 | None:intergenic |
CGCAAATTTACAAGCAGATG+AGG | 0.513157 | 2.3:-61568844 | None:intergenic |
TTGTTTGAATTTGTATGCAA+AGG | 0.513684 | 2.3:+61564401 | MS.gene048301:CDS |
GTGCAACACTTCCTGATCAA+TGG | 0.516478 | 2.3:-61564003 | None:intergenic |
TCAGGACATTTCGTACATTG+AGG | 0.519644 | 2.3:+61570323 | MS.gene048301:CDS |
CTGGACAGTTATGAAGGTAC+TGG | 0.524083 | 2.3:+61565427 | MS.gene048301:intron |
CATTTGGCGATCAAATTCCA+TGG | 0.524670 | 2.3:+61566903 | MS.gene048301:CDS |
GAGTGGAGTGAAACTTCAAA+AGG | 0.526023 | 2.3:+61571311 | MS.gene048301:CDS |
ACACCATAAAACAGTAGGAC+TGG | 0.528915 | 2.3:-61562849 | None:intergenic |
AAGTTCTACAAACATCTAGA+TGG | 0.529281 | 2.3:+61570742 | MS.gene048301:CDS |
AGTTACAGAAGCTGCAGAGA+AGG | 0.530578 | 2.3:+61568084 | MS.gene048301:CDS |
ATGCCATCCCTAATCTTAGC+AGG | 0.531640 | 2.3:+61565799 | MS.gene048301:CDS |
AAGTTGATGGATCAAATCAC+GGG | 0.532334 | 2.3:+61569144 | MS.gene048301:CDS |
ATTATCACTCGCTTCTTGCA+AGG | 0.534075 | 2.3:+61563605 | MS.gene048301:CDS |
GGATGATATGAAGTTAAAAG+AGG | 0.535288 | 2.3:+61571197 | MS.gene048301:intron |
TCTTCATTACATGCTTAGCC+AGG | 0.537572 | 2.3:+61562814 | MS.gene048301:CDS |
GTTGCCTTGTTGGCTGCTCG+TGG | 0.538068 | 2.3:+61564189 | MS.gene048301:CDS |
GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 2.3:-61568958 | None:intergenic |
ATCAGAACTCTCATTGAGAA+TGG | 0.540090 | 2.3:+61562273 | MS.gene048301:CDS |
TGATTTATACTATGTCAATC+GGG | 0.541521 | 2.3:+61565926 | MS.gene048301:CDS |
TACCAAGTAGTACAAATAAG+TGG | 0.541889 | 2.3:-61566165 | None:intergenic |
CCAAGCAAAGACTTCACTAC+AGG | 0.542464 | 2.3:-61565263 | None:intergenic |
AGATGAGGAAGATCTGTCCT+TGG | 0.543526 | 2.3:-61568829 | None:intergenic |
GCAGAGTGACATGAGGAAGA+AGG | 0.548876 | 2.3:+61562239 | None:intergenic |
TGTTGGCTGCTCGTGGCCGA+GGG | 0.550071 | 2.3:+61564196 | MS.gene048301:CDS |
ATAGAGACGGTTGAGGGAGG+AGG | 0.552978 | 2.3:+61563308 | MS.gene048301:CDS |
TGTCTCATTTGGGCTAACGC+TGG | 0.553244 | 2.3:+61568900 | MS.gene048301:CDS |
ATATGATATGAAGCGACTAA+AGG | 0.556805 | 2.3:+61569712 | MS.gene048301:CDS |
TCAATTTCATCATTGTCAAG+AGG | 0.557706 | 2.3:-61569122 | None:intergenic |
ACCCATTAACAGTAGAAGAC+AGG | 0.559079 | 2.3:-61565301 | None:intergenic |
TATAAATCACACTCACTACA+TGG | 0.560842 | 2.3:-61565912 | None:intergenic |
AAGACAGGAAGACTAAATAT+GGG | 0.562279 | 2.3:-61565286 | None:intergenic |
GCTGTCTACAGTTACTATGA+AGG | 0.566578 | 2.3:+61568004 | MS.gene048301:intron |
ATTGACAGAAACCGGAGTGA+TGG | 0.567213 | 2.3:-61563685 | None:intergenic |
ACTTACTCCTATCTCTGAGA+TGG | 0.568913 | 2.3:+61568030 | MS.gene048301:CDS |
AATCACACACGGAGGCCACT+GGG | 0.572127 | 2.3:+61563562 | MS.gene048301:CDS |
GAAGTTGATGGATCAAATCA+CGG | 0.573925 | 2.3:+61569143 | MS.gene048301:CDS |
CCAGAGAAGCTTCATTACAT+TGG | 0.575108 | 2.3:+61568877 | MS.gene048301:CDS |
CAATGTAATGAAGCTTCTCT+GGG | 0.575197 | 2.3:-61568876 | None:intergenic |
ATCGCCAGAAGCATATCTGA+TGG | 0.576905 | 2.3:-61565730 | None:intergenic |
TCGGCCACGAGCAGCCAACA+AGG | 0.578090 | 2.3:-61564193 | None:intergenic |
TAATGCAGCTAAACAAGTTG+AGG | 0.579381 | 2.3:+61571052 | MS.gene048301:CDS |
TCACATAAGGTCCATCACTC+CGG | 0.580462 | 2.3:+61563674 | MS.gene048301:CDS |
AAATTACCCTCATGGCACTT+GGG | 0.582738 | 2.3:-61567000 | None:intergenic |
CAAGAGCAGCTGATTTCCCT+CGG | 0.585819 | 2.3:-61564212 | None:intergenic |
TTACCTGAATTGTCTGTCTG+TGG | 0.586384 | 2.3:-61565033 | None:intergenic |
GTGGACTCCCTAGACTGTCA+TGG | 0.586723 | 2.3:+61570995 | MS.gene048301:intron |
GGGACAAATGGAGCTGAAAG+AGG | 0.588341 | 2.3:+61570684 | MS.gene048301:intron |
AAAGACTTCACTACAGGCAG+TGG | 0.593286 | 2.3:-61565257 | None:intergenic |
ATCTTTGTGATAAGAAAAGA+GGG | 0.593501 | 2.3:-61565952 | None:intergenic |
ACGAACAATAGAGACGGTTG+AGG | 0.595470 | 2.3:+61563301 | MS.gene048301:CDS |
TCATCCAAAGATACACTAAG+AGG | 0.596200 | 2.3:-61571020 | None:intergenic |
CCGTCTCTATTGTTCGTGCT+AGG | 0.600815 | 2.3:-61563295 | None:intergenic |
ACTTGACAGAATACTGTGAC+TGG | 0.603222 | 2.3:+61569074 | MS.gene048301:intron |
TAACCTGCTAAGATTAGGGA+TGG | 0.603288 | 2.3:-61565802 | None:intergenic |
GGCATATTACCCAACAGCAA+CGG | 0.605207 | 2.3:-61564253 | None:intergenic |
TTCAGTAGCTTTATGGAACG+CGG | 0.608593 | 2.3:-61564990 | None:intergenic |
GTAATCCATGCCACGAAACG+TGG | 0.610532 | 2.3:-61569316 | None:intergenic |
GATTCTGCCAAGACATCAGA+GGG | 0.612667 | 2.3:+61565499 | MS.gene048301:CDS |
GAGTGACATGAGGAAGAAGG+TGG | 0.613554 | 2.3:+61562242 | None:intergenic |
CTCACCACACGAAACTCGTA+AGG | 0.614225 | 2.3:-61569749 | None:intergenic |
CGAACAATAGAGACGGTTGA+GGG | 0.620193 | 2.3:+61563302 | MS.gene048301:CDS |
TACACACCCAAGTGCCATGA+GGG | 0.621730 | 2.3:+61566994 | MS.gene048301:CDS |
TCAGTAGCTTTATGGAACGC+GGG | 0.622619 | 2.3:-61564989 | None:intergenic |
TGATTCTGCCAAGACATCAG+AGG | 0.622894 | 2.3:+61565498 | MS.gene048301:CDS |
AAATACAAATGAGTAAGGAT+GGG | 0.623146 | 2.3:-61570231 | None:intergenic |
TTGTAACACCATAAAACAGT+AGG | 0.624455 | 2.3:-61562854 | None:intergenic |
GCTTACATGTTTGTACACAA+TGG | 0.626330 | 2.3:+61563364 | MS.gene048301:CDS |
ACATACAGGTTTGTCTTGAG+GGG | 0.631624 | 2.3:+61566831 | MS.gene048301:intron |
TATGGTGTTACAAGGACAAG+CGG | 0.632282 | 2.3:+61562864 | MS.gene048301:CDS |
ATGGTGTTAAAACAAGGCAC+AGG | 0.633038 | 2.3:+61562292 | MS.gene048301:CDS |
CACTCCGGTTTCTGTCAATG+AGG | 0.633545 | 2.3:+61563689 | MS.gene048301:CDS |
GTCACCAATGATGACAAACA+TGG | 0.638429 | 2.3:-61562316 | None:intergenic |
ATGCGAGCACCTGAAAGTGA+AGG | 0.643010 | 2.3:-61566959 | None:intergenic |
TTGAGAATGGTGTTAAAACA+AGG | 0.644119 | 2.3:+61562286 | MS.gene048301:CDS |
TTTGCATACAAATTCAAACA+AGG | 0.646718 | 2.3:-61564399 | None:intergenic |
GATCAGGAAGTGTTGCACAA+TGG | 0.652566 | 2.3:+61564008 | MS.gene048301:CDS |
ATGTTTGTACACAATGGTGA+TGG | 0.656217 | 2.3:+61563370 | MS.gene048301:CDS |
ACAATAGAGACGGTTGAGGG+AGG | 0.659463 | 2.3:+61563305 | MS.gene048301:CDS |
TGGTGACAAGTACTATGACC+AGG | 0.660528 | 2.3:+61562332 | MS.gene048301:CDS |
TTGAAGAAAACGTAAAACCA+AGG | 0.662051 | 2.3:+61568812 | MS.gene048301:CDS |
ACAGCAATAACACCATCAGA+TGG | 0.662972 | 2.3:-61571276 | None:intergenic |
CAATGTATAGGAATTTGATG+TGG | 0.663176 | 2.3:+61564952 | MS.gene048301:intron |
GCTGTGAAAGCCATTAGGAG+TGG | 0.672918 | 2.3:+61571294 | MS.gene048301:CDS |
GCAATCCAGAGTTTGAGCAG+TGG | 0.690063 | 2.3:+61566872 | MS.gene048301:CDS |
TTTATGCTATAGGACTCTGA+AGG | 0.690132 | 2.3:+61563913 | MS.gene048301:intron |
CCTAGCACGAACAATAGAGA+CGG | 0.692555 | 2.3:+61563295 | MS.gene048301:CDS |
CTACACACCCAAGTGCCATG+AGG | 0.695468 | 2.3:+61566993 | MS.gene048301:CDS |
TGGTCCTTACGAGTTTCGTG+TGG | 0.696733 | 2.3:+61569745 | MS.gene048301:CDS |
ATTTCGAACTGAATCACACA+CGG | 0.725164 | 2.3:+61563551 | MS.gene048301:CDS |
GCGTTCATTAAAGCGCCCAG+TGG | 0.730706 | 2.3:-61563577 | None:intergenic |
AGTTGATGGATCAAATCACG+GGG | 0.752220 | 2.3:+61569145 | MS.gene048301:CDS |
AAATCACACTCACTACATGG+AGG | 0.757919 | 2.3:-61565909 | None:intergenic |
TCGAACTGAATCACACACGG+AGG | 0.793288 | 2.3:+61563554 | MS.gene048301:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 61562249 | 61571413 | 61562249 | ID=MS.gene048301 |
chr2.3 | mRNA | 61562249 | 61571413 | 61562249 | ID=MS.gene048301.t1;Parent=MS.gene048301 |
chr2.3 | exon | 61562249 | 61562353 | 61562249 | ID=MS.gene048301.t1.exon1;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61562249 | 61562353 | 61562249 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61562806 | 61562885 | 61562806 | ID=MS.gene048301.t1.exon2;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61562806 | 61562885 | 61562806 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61562990 | 61563161 | 61562990 | ID=MS.gene048301.t1.exon3;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61562990 | 61563161 | 61562990 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61563269 | 61563391 | 61563269 | ID=MS.gene048301.t1.exon4;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61563269 | 61563391 | 61563269 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61563537 | 61563710 | 61563537 | ID=MS.gene048301.t1.exon5;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61563537 | 61563710 | 61563537 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61563925 | 61564035 | 61563925 | ID=MS.gene048301.t1.exon6;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61563925 | 61564035 | 61563925 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61564129 | 61564265 | 61564129 | ID=MS.gene048301.t1.exon7;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61564129 | 61564265 | 61564129 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61564352 | 61564445 | 61564352 | ID=MS.gene048301.t1.exon8;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61564352 | 61564445 | 61564352 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61564962 | 61565051 | 61564962 | ID=MS.gene048301.t1.exon9;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61564962 | 61565051 | 61564962 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61565185 | 61565321 | 61565185 | ID=MS.gene048301.t1.exon10;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61565185 | 61565321 | 61565185 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61565435 | 61565532 | 61565435 | ID=MS.gene048301.t1.exon11;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61565435 | 61565532 | 61565435 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61565703 | 61565820 | 61565703 | ID=MS.gene048301.t1.exon12;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61565703 | 61565820 | 61565703 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61565905 | 61565992 | 61565905 | ID=MS.gene048301.t1.exon13;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61565905 | 61565992 | 61565905 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61566085 | 61566184 | 61566085 | ID=MS.gene048301.t1.exon14;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61566085 | 61566184 | 61566085 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61566283 | 61566335 | 61566283 | ID=MS.gene048301.t1.exon15;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61566283 | 61566335 | 61566283 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61566839 | 61567015 | 61566839 | ID=MS.gene048301.t1.exon16;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61566839 | 61567015 | 61566839 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61567102 | 61567139 | 61567102 | ID=MS.gene048301.t1.exon17;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61567102 | 61567139 | 61567102 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61568015 | 61568105 | 61568015 | ID=MS.gene048301.t1.exon18;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61568015 | 61568105 | 61568015 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61568802 | 61568981 | 61568802 | ID=MS.gene048301.t1.exon19;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61568802 | 61568981 | 61568802 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61569083 | 61569191 | 61569083 | ID=MS.gene048301.t1.exon20;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61569083 | 61569191 | 61569083 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61569283 | 61569352 | 61569283 | ID=MS.gene048301.t1.exon21;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61569283 | 61569352 | 61569283 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61569631 | 61569766 | 61569631 | ID=MS.gene048301.t1.exon22;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61569631 | 61569766 | 61569631 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61570216 | 61570344 | 61570216 | ID=MS.gene048301.t1.exon23;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61570216 | 61570344 | 61570216 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61570685 | 61570810 | 61570685 | ID=MS.gene048301.t1.exon24;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61570685 | 61570810 | 61570685 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61571008 | 61571073 | 61571008 | ID=MS.gene048301.t1.exon25;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61571008 | 61571073 | 61571008 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
chr2.3 | exon | 61571198 | 61571413 | 61571198 | ID=MS.gene048301.t1.exon26;Parent=MS.gene048301.t1 |
chr2.3 | CDS | 61571198 | 61571413 | 61571198 | ID=cds.MS.gene048301.t1;Parent=MS.gene048301.t1 |
Gene Sequence |
Protein sequence |