Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003175.t1 | AES64635.2 | 95.7 | 984 | 42 | 0 | 1 | 984 | 1 | 984 | 0.00E+00 | 1856.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003175.t1 | Q9XIK4 | 67.3 | 1005 | 300 | 9 | 1 | 979 | 1 | 1002 | 0.0e+00 | 1293.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003175.t1 | G7ISQ3 | 95.7 | 984 | 42 | 0 | 1 | 984 | 1 | 984 | 0.0e+00 | 1856.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003175.t1 | MTR_2g028030 | 95.323 | 1005 | 46 | 1 | 1 | 1004 | 1 | 1005 | 0.0 | 1979 |
| MS.gene003175.t1 | MTR_8g092060 | 75.194 | 1032 | 226 | 9 | 1 | 1005 | 1 | 1029 | 0.0 | 1544 |
| MS.gene003175.t1 | MTR_2g449880 | 76.190 | 42 | 10 | 0 | 634 | 675 | 32 | 73 | 1.53e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003175.t1 | AT1G10490 | 66.440 | 1031 | 317 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1328 |
| MS.gene003175.t1 | AT1G10490 | 66.440 | 1031 | 317 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1328 |
| MS.gene003175.t1 | AT3G57940 | 68.316 | 950 | 288 | 5 | 1 | 938 | 1 | 949 | 0.0 | 1291 |
| MS.gene003175.t1 | AT3G57940 | 68.000 | 950 | 286 | 6 | 1 | 938 | 1 | 944 | 0.0 | 1277 |
Find 186 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATCAAGTTGTTCTTTA+AGG | 0.094886 | 2.1:-62738553 | None:intergenic |
| TGATTCTTTCAGTAGCTTTA+TGG | 0.119567 | 2.1:-62739583 | None:intergenic |
| CTTGGTGGAGCCTGTATTTC+AGG | 0.125854 | 2.1:-62742602 | None:intergenic |
| ATTGAGGAAGAGGGGTTTAT+TGG | 0.178337 | 2.1:+62737609 | MS.gene003175:CDS |
| CATTACATTGGTGTCTCATT+TGG | 0.200504 | 2.1:+62743430 | MS.gene003175:CDS |
| AAAAGCTGTTGTCACATTTA+TGG | 0.211036 | 2.1:+62738718 | MS.gene003175:CDS |
| AAAATTCTGGGTAGTACTTT+TGG | 0.212769 | 2.1:+62737709 | MS.gene003175:CDS |
| AATAACTCGTTGTTTGTATA+AGG | 0.235420 | 2.1:+62737678 | MS.gene003175:CDS |
| GAAGACAGGAAGACTAAATA+TGG | 0.250031 | 2.1:-62739873 | None:intergenic |
| TTCCTGTCTTCTACTGTTAA+TGG | 0.250402 | 2.1:+62739885 | MS.gene003175:CDS |
| CTTTAATTTCAGCTTGGTTA+TGG | 0.254393 | 2.1:+62741674 | MS.gene003175:intron |
| GTTGTTCTTTAAGGTTCTTC+AGG | 0.268516 | 2.1:-62738544 | None:intergenic |
| GGAACCTCTTGGTGTATCTT+TGG | 0.285841 | 2.1:+62745551 | MS.gene003175:CDS |
| GAATGTTGATTCGATCTTCT+TGG | 0.294677 | 2.1:-62745308 | None:intergenic |
| ATGTTCAAACCTTGGTAAAA+TGG | 0.303520 | 2.1:-62743713 | None:intergenic |
| TAAGGATTCAGACAAAATTC+TGG | 0.306572 | 2.1:+62737696 | MS.gene003175:CDS |
| ACATCAGAGGGCACTGATTC+TGG | 0.315070 | 2.1:+62740097 | MS.gene003175:CDS |
| GCTCTTGGTTTATCTATTGC+TGG | 0.316573 | 2.1:+62738815 | MS.gene003175:CDS |
| ATTACATTGGTGTCTCATTT+GGG | 0.317586 | 2.1:+62743431 | MS.gene003175:CDS |
| ATTCAGTTCGAAATCTTTCA+TGG | 0.322534 | 2.1:-62738129 | None:intergenic |
| TCCTGTCTTCTACTGTTAAT+GGG | 0.330482 | 2.1:+62739886 | MS.gene003175:CDS |
| AGAAATAACCTGCTAAGATT+AGG | 0.335625 | 2.1:-62740391 | None:intergenic |
| CCAATGTAATGAAGCTTCTC+TGG | 0.343452 | 2.1:-62743418 | None:intergenic |
| GTAATGTGATGCAACATATA+AGG | 0.350439 | 2.1:-62740679 | None:intergenic |
| GACATCAGCTGTAGATCATT+TGG | 0.350952 | 2.1:-62740711 | None:intergenic |
| AAGTTTCACTCCACTCCTAA+TGG | 0.353131 | 2.1:-62745839 | None:intergenic |
| CTGGCGATCCCATTGAAAAC+TGG | 0.354899 | 2.1:+62740329 | MS.gene003175:CDS |
| AAGTGCTGTTGTTGCCTTGT+TGG | 0.361862 | 2.1:+62738766 | MS.gene003175:CDS |
| CACCACTTATTTGTACTACT+TGG | 0.363582 | 2.1:+62740747 | MS.gene003175:CDS |
| TGATTCTTTGATTCATCAAC+AGG | 0.363807 | 2.1:-62740869 | None:intergenic |
| TTGCATTGGTCTGCAAAATC+AGG | 0.367543 | 2.1:+62744840 | MS.gene003175:CDS |
| ATCTTCCACGTTTCGTGGCA+TGG | 0.386368 | 2.1:+62743845 | MS.gene003175:CDS |
| TTGCTGGAGCCGTTGCTGTT+GGG | 0.386520 | 2.1:+62738831 | MS.gene003175:CDS |
| CGACTAAAGGCTTATGTTGA+TGG | 0.386670 | 2.1:+62744259 | MS.gene003175:CDS |
| CTTCTATCTTCCACGTTTCG+TGG | 0.394509 | 2.1:+62743840 | MS.gene003175:CDS |
| TACCTATTTCATCTCACATA+AGG | 0.396827 | 2.1:+62738248 | MS.gene003175:CDS |
| TAGAAAACTTAACTGGAATC+TGG | 0.397069 | 2.1:-62743513 | None:intergenic |
| GTGAAGGAAAATTTGTGTCT+TGG | 0.397805 | 2.1:-62741527 | None:intergenic |
| TACATACAGGTTTGTCTTGA+GGG | 0.398420 | 2.1:+62741414 | MS.gene003175:intron |
| GCTCTCGCAAGTTGAATTGT+TGG | 0.401328 | 2.1:+62739797 | MS.gene003175:CDS |
| AATGATGAAATTGAAGTTGA+TGG | 0.405431 | 2.1:+62743665 | MS.gene003175:CDS |
| TGGATGACGCACAAAATATC+AGG | 0.406769 | 2.1:-62740896 | None:intergenic |
| GAAATAACCTGCTAAGATTA+GGG | 0.409631 | 2.1:-62740390 | None:intergenic |
| AGGACCATGTTTGTCATCAT+TGG | 0.411257 | 2.1:+62736896 | MS.gene003175:CDS |
| AAAATACAAATGAGTAATGA+TGG | 0.412396 | 2.1:-62744767 | None:intergenic |
| TCTGCAGCTTCTGTAACTCT+TGG | 0.415583 | 2.1:-62742620 | None:intergenic |
| TTGCAAGGCATGTGTGTTCA+TGG | 0.416518 | 2.1:+62738207 | MS.gene003175:CDS |
| TTTAATTCAATAGGGACAAA+TGG | 0.416536 | 2.1:+62745207 | MS.gene003175:intron |
| GACCTTATGTGAGATGAAAT+AGG | 0.418137 | 2.1:-62738250 | None:intergenic |
| CGAGGGAAATCAGCTGCTCT+TGG | 0.418892 | 2.1:+62738800 | MS.gene003175:CDS |
| TTGTTGGCTGCTCGTGGCCG+AGG | 0.420581 | 2.1:+62738782 | MS.gene003175:CDS |
| ATTGTTCGTGCTAGGAGATT+AGG | 0.422097 | 2.1:-62737874 | None:intergenic |
| AGCAGTGGTCGTCAACCATT+TGG | 0.423050 | 2.1:+62741471 | MS.gene003175:CDS |
| GTGATTTATACTATGTCAAT+CGG | 0.424115 | 2.1:+62740509 | MS.gene003175:CDS |
| GACGACCACTGCTCAAACTC+TGG | 0.424946 | 2.1:-62741461 | None:intergenic |
| TCAATATCCATCTCAGAGAT+AGG | 0.427542 | 2.1:-62742578 | None:intergenic |
| GACGGTTGAGGGAGGAGGTC+TGG | 0.430882 | 2.1:+62737900 | MS.gene003175:CDS |
| GAATCCATCAGATATGCTTC+TGG | 0.434652 | 2.1:+62740310 | MS.gene003175:CDS |
| GAATCACACACGGAGGCCAC+TGG | 0.437897 | 2.1:+62738148 | MS.gene003175:CDS |
| GCACCACAGACAGACAATTC+AGG | 0.439083 | 2.1:+62739616 | MS.gene003175:CDS |
| TTATTGCTGTGAAAGCCATT+AGG | 0.453352 | 2.1:+62745824 | MS.gene003175:CDS |
| AGTACCTCATTGACAGAAAC+CGG | 0.455246 | 2.1:-62738280 | None:intergenic |
| ATCAGTGCCCTCTGATGTCT+TGG | 0.457793 | 2.1:-62740092 | None:intergenic |
| CATGGAATTTGATCGCCAAA+TGG | 0.460355 | 2.1:-62741486 | None:intergenic |
| GCTTCTGTGTTACTTTGCAT+TGG | 0.464108 | 2.1:+62744826 | MS.gene003175:CDS |
| GCAGCTTCTGTAACTCTTGG+TGG | 0.467911 | 2.1:-62742617 | None:intergenic |
| CCTGTAGTGAAGTCTTTGCT+TGG | 0.468559 | 2.1:+62739849 | MS.gene003175:CDS |
| TGCTTGTAAATTTGCGTGAA+AGG | 0.470146 | 2.1:+62743392 | MS.gene003175:CDS |
| TGTAAAACAGACTCAAAGTC+AGG | 0.473602 | 2.1:-62745769 | None:intergenic |
| CTTCTCATAAACATCACAAA+TGG | 0.476260 | 2.1:-62737649 | None:intergenic |
| GACTGGATTTGATCTGTGCC+TGG | 0.476341 | 2.1:-62737418 | None:intergenic |
| GGATATTGAACCTGAAATAC+AGG | 0.477216 | 2.1:+62742592 | MS.gene003175:CDS |
| TTTATCTGCACTTGACTACA+AGG | 0.477413 | 2.1:+62739010 | MS.gene003175:CDS |
| GAAGTGTTGCACAATGGATC+AGG | 0.478725 | 2.1:+62738601 | MS.gene003175:CDS |
| TTACATACAGGTTTGTCTTG+AGG | 0.480191 | 2.1:+62741413 | MS.gene003175:intron |
| TACATGTTGGACCATTGATC+AGG | 0.480671 | 2.1:+62738579 | MS.gene003175:CDS |
| GAAATTACCCTCATGGCACT+TGG | 0.481815 | 2.1:-62741585 | None:intergenic |
| ATTGCTGGAGCCGTTGCTGT+TGG | 0.482794 | 2.1:+62738830 | MS.gene003175:CDS |
| AATTGCTCACAGAATTTCCA+TGG | 0.484074 | 2.1:-62741504 | None:intergenic |
| CACAAATGGATCAGCTCTAT+CGG | 0.484503 | 2.1:-62737635 | None:intergenic |
| AAGGATTCAGACAAAATTCT+GGG | 0.485701 | 2.1:+62737697 | MS.gene003175:CDS |
| TTTACACTGGACAGTTATGA+AGG | 0.489444 | 2.1:+62740007 | MS.gene003175:intron |
| AAATTTAAGCTTCCTCCAAA+AGG | 0.493708 | 2.1:-62743473 | None:intergenic |
| TATCTTTGTGATAAGAAAAG+AGG | 0.495526 | 2.1:-62740537 | None:intergenic |
| GGGGCAGATATCTTGTCATT+CGG | 0.497781 | 2.1:+62741434 | MS.gene003175:CDS |
| TGTAAAGCTGACAATTCAAC+CGG | 0.500346 | 2.1:-62744802 | None:intergenic |
| CTTGATGAAACTTTACATGT+TGG | 0.500629 | 2.1:+62738566 | MS.gene003175:CDS |
| TGATAATTTATCCAGGATCA+TGG | 0.501330 | 2.1:+62744150 | MS.gene003175:intron |
| AGTACAAATAAGTGGTGTGC+TGG | 0.505222 | 2.1:-62740741 | None:intergenic |
| GACTGGTGAGCATTCATGTA+TGG | 0.506125 | 2.1:+62743625 | MS.gene003175:CDS |
| CTTGTTTAGCTGCATTATTG+AGG | 0.507282 | 2.1:-62745581 | None:intergenic |
| CGCAAATTTACAAGCAGATG+AGG | 0.513157 | 2.1:-62743385 | None:intergenic |
| TTGTTTGAATTTGTATGCAA+AGG | 0.513684 | 2.1:+62738987 | MS.gene003175:CDS |
| GTGCAACACTTCCTGATCAA+TGG | 0.516478 | 2.1:-62738590 | None:intergenic |
| TCAGGACATTTCGTACATTG+AGG | 0.519644 | 2.1:+62744858 | MS.gene003175:CDS |
| CTGGACAGTTATGAAGGTAC+TGG | 0.524083 | 2.1:+62740013 | MS.gene003175:intron |
| TAGACTGTCATGGAACCTCT+TGG | 0.524527 | 2.1:+62745540 | MS.gene003175:intron |
| CATTTGGCGATCAAATTCCA+TGG | 0.524670 | 2.1:+62741487 | MS.gene003175:CDS |
| GAGTGGAGTGAAACTTCAAA+AGG | 0.526023 | 2.1:+62745846 | MS.gene003175:CDS |
| ACACCATAAAACAGTAGGAC+TGG | 0.528915 | 2.1:-62737435 | None:intergenic |
| AAGTTCTACAAACATCTAGA+TGG | 0.529281 | 2.1:+62745277 | MS.gene003175:CDS |
| AGTTACAGAAGCTGCAGAGA+AGG | 0.530578 | 2.1:+62742625 | MS.gene003175:CDS |
| ATGCCATCCCTAATCTTAGC+AGG | 0.531640 | 2.1:+62740383 | MS.gene003175:CDS |
| AAGTTGATGGATCAAATCAC+GGG | 0.532334 | 2.1:+62743678 | MS.gene003175:CDS |
| ATTATCACTCGCTTCTTGCA+AGG | 0.534075 | 2.1:+62738192 | MS.gene003175:CDS |
| GGATGATATGAAGTTAAAAG+AGG | 0.535288 | 2.1:+62745732 | MS.gene003175:intron |
| TGTCTCATTTGGGCTAACAC+TGG | 0.536798 | 2.1:+62743441 | MS.gene003175:CDS |
| TCTTCATTACATGCTTAGCC+AGG | 0.537572 | 2.1:+62737400 | MS.gene003175:CDS |
| GTTGCCTTGTTGGCTGCTCG+TGG | 0.538068 | 2.1:+62738776 | MS.gene003175:CDS |
| GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 2.1:-62743499 | None:intergenic |
| ATCAGAACTCTCATTGAGAA+TGG | 0.540090 | 2.1:+62736857 | MS.gene003175:CDS |
| TGATTTATACTATGTCAATC+GGG | 0.541521 | 2.1:+62740510 | MS.gene003175:CDS |
| TACCAAGTAGTACAAATAAG+TGG | 0.541889 | 2.1:-62740749 | None:intergenic |
| CCAAGCAAAGACTTCACTAC+AGG | 0.542464 | 2.1:-62739849 | None:intergenic |
| AGATGAGGAAGATCTGTCCT+TGG | 0.543526 | 2.1:-62743370 | None:intergenic |
| GCAGAGTGACATGAGGAAGA+AGG | 0.548876 | 2.1:+62736823 | None:intergenic |
| TGTTGGCTGCTCGTGGCCGA+GGG | 0.550071 | 2.1:+62738783 | MS.gene003175:CDS |
| ATAGAGACGGTTGAGGGAGG+AGG | 0.552978 | 2.1:+62737895 | MS.gene003175:CDS |
| ATATGATATGAAGCGACTAA+AGG | 0.556805 | 2.1:+62744246 | MS.gene003175:CDS |
| TCAATTTCATCATTGTCAAG+AGG | 0.557706 | 2.1:-62743656 | None:intergenic |
| ACCCATTAACAGTAGAAGAC+AGG | 0.559079 | 2.1:-62739887 | None:intergenic |
| TATAAATCACACTCACTACA+TGG | 0.560842 | 2.1:-62740496 | None:intergenic |
| AAGACAGGAAGACTAAATAT+GGG | 0.562279 | 2.1:-62739872 | None:intergenic |
| CCAGAGAAGCTTCATTACAT+TGG | 0.566084 | 2.1:+62743418 | MS.gene003175:CDS |
| GCTGTCTACAGTTACTATGA+AGG | 0.566578 | 2.1:+62742545 | MS.gene003175:intron |
| ATTGACAGAAACCGGAGTGA+TGG | 0.567213 | 2.1:-62738272 | None:intergenic |
| ACTTACTCCTATCTCTGAGA+TGG | 0.568913 | 2.1:+62742571 | MS.gene003175:CDS |
| AATCACACACGGAGGCCACT+GGG | 0.572127 | 2.1:+62738149 | MS.gene003175:CDS |
| GAAGTTGATGGATCAAATCA+CGG | 0.573925 | 2.1:+62743677 | MS.gene003175:CDS |
| TGGATTACAAGCTTGCTATG+AGG | 0.574233 | 2.1:+62743865 | MS.gene003175:CDS |
| CAATGTAATGAAGCTTCTCT+GGG | 0.575197 | 2.1:-62743417 | None:intergenic |
| ATCGCCAGAAGCATATCTGA+TGG | 0.576905 | 2.1:-62740314 | None:intergenic |
| TCGGCCACGAGCAGCCAACA+AGG | 0.578090 | 2.1:-62738780 | None:intergenic |
| TAATGCAGCTAAACAAGTTG+AGG | 0.579381 | 2.1:+62745587 | MS.gene003175:CDS |
| TCACATAAGGTCCATCACTC+CGG | 0.580462 | 2.1:+62738261 | MS.gene003175:CDS |
| AAATTACCCTCATGGCACTT+GGG | 0.582738 | 2.1:-62741584 | None:intergenic |
| CAAGAGCAGCTGATTTCCCT+CGG | 0.585819 | 2.1:-62738799 | None:intergenic |
| TTACCTGAATTGTCTGTCTG+TGG | 0.586384 | 2.1:-62739619 | None:intergenic |
| GTGGACTCCCTAGACTGTCA+TGG | 0.586723 | 2.1:+62745530 | MS.gene003175:intron |
| GGGACAAATGGAGCTGAAAG+AGG | 0.588341 | 2.1:+62745219 | MS.gene003175:intron |
| AAATACAAATGAGTAATGAT+GGG | 0.588849 | 2.1:-62744766 | None:intergenic |
| AAAGACTTCACTACAGGCAG+TGG | 0.593286 | 2.1:-62739843 | None:intergenic |
| ATCTTTGTGATAAGAAAAGA+GGG | 0.593501 | 2.1:-62740536 | None:intergenic |
| ACGAACAATAGAGACGGTTG+AGG | 0.595470 | 2.1:+62737888 | MS.gene003175:CDS |
| CCGTCTCTATTGTTCGTGCT+AGG | 0.600815 | 2.1:-62737882 | None:intergenic |
| ACTTGACAGAATACTGTGAC+TGG | 0.603222 | 2.1:+62743608 | MS.gene003175:intron |
| TAACCTGCTAAGATTAGGGA+TGG | 0.603288 | 2.1:-62740386 | None:intergenic |
| GGCATATTACCCAACAGCAA+CGG | 0.605207 | 2.1:-62738840 | None:intergenic |
| TTCAGTAGCTTTATGGAACG+CGG | 0.608593 | 2.1:-62739576 | None:intergenic |
| GTAATCCATGCCACGAAACG+TGG | 0.610532 | 2.1:-62743850 | None:intergenic |
| GATTCTGCCAAGACATCAGA+GGG | 0.612667 | 2.1:+62740085 | MS.gene003175:CDS |
| GAGTGACATGAGGAAGAAGG+TGG | 0.613554 | 2.1:+62736826 | None:intergenic |
| CTCACCACACGAAACTCGTA+AGG | 0.614225 | 2.1:-62744283 | None:intergenic |
| CGAACAATAGAGACGGTTGA+GGG | 0.620193 | 2.1:+62737889 | MS.gene003175:CDS |
| TACACACCCAAGTGCCATGA+GGG | 0.621730 | 2.1:+62741578 | MS.gene003175:CDS |
| TCAGTAGCTTTATGGAACGC+GGG | 0.622619 | 2.1:-62739575 | None:intergenic |
| TGATTCTGCCAAGACATCAG+AGG | 0.622894 | 2.1:+62740084 | MS.gene003175:CDS |
| TTGTAACACCATAAAACAGT+AGG | 0.624455 | 2.1:-62737440 | None:intergenic |
| GCTTACATGTTTGTACACAA+TGG | 0.626330 | 2.1:+62737951 | MS.gene003175:CDS |
| ACATACAGGTTTGTCTTGAG+GGG | 0.631624 | 2.1:+62741415 | MS.gene003175:intron |
| TATGGTGTTACAAGGACAAG+CGG | 0.632282 | 2.1:+62737450 | MS.gene003175:CDS |
| CACTCCGGTTTCTGTCAATG+AGG | 0.633545 | 2.1:+62738276 | MS.gene003175:CDS |
| TGGTGATAAGTATTATGACC+AGG | 0.637720 | 2.1:+62736916 | MS.gene003175:CDS |
| ATGCGAGCACCTGAAAGTGA+AGG | 0.643010 | 2.1:-62741543 | None:intergenic |
| TTGAGAATGGTGTTAAAACA+AGG | 0.644119 | 2.1:+62736870 | MS.gene003175:CDS |
| TTTGCATACAAATTCAAACA+AGG | 0.646718 | 2.1:-62738985 | None:intergenic |
| ATGGTGTTAAAACAAGGCAC+AGG | 0.646966 | 2.1:+62736876 | MS.gene003175:CDS |
| GATCAGGAAGTGTTGCACAA+TGG | 0.652566 | 2.1:+62738595 | MS.gene003175:CDS |
| ATGTTTGTACACAATGGTGA+TGG | 0.656217 | 2.1:+62737957 | MS.gene003175:CDS |
| ACAATAGAGACGGTTGAGGG+AGG | 0.659463 | 2.1:+62737892 | MS.gene003175:CDS |
| TTGAAGAAAACGTAAAACCA+AGG | 0.662051 | 2.1:+62743353 | MS.gene003175:CDS |
| ACAGCAATAACACCATCAGA+TGG | 0.662972 | 2.1:-62745811 | None:intergenic |
| CAATGTATAGGAATTTGATG+TGG | 0.663176 | 2.1:+62739538 | MS.gene003175:intron |
| GCTGTGAAAGCCATTAGGAG+TGG | 0.672918 | 2.1:+62745829 | MS.gene003175:CDS |
| ATCACCAATGATGACAAACA+TGG | 0.686674 | 2.1:-62736900 | None:intergenic |
| GCAATCCAGAGTTTGAGCAG+TGG | 0.690063 | 2.1:+62741456 | MS.gene003175:CDS |
| TTTATGCTATAGGACTCTGA+AGG | 0.690132 | 2.1:+62738500 | MS.gene003175:intron |
| CCTAGCACGAACAATAGAGA+CGG | 0.692555 | 2.1:+62737882 | MS.gene003175:CDS |
| CTACACACCCAAGTGCCATG+AGG | 0.695468 | 2.1:+62741577 | MS.gene003175:CDS |
| TGGTCCTTACGAGTTTCGTG+TGG | 0.696733 | 2.1:+62744279 | MS.gene003175:CDS |
| TCATCCAAAGATACACCAAG+AGG | 0.706728 | 2.1:-62745555 | None:intergenic |
| ATTTCGAACTGAATCACACA+CGG | 0.725164 | 2.1:+62738138 | MS.gene003175:CDS |
| GCGTTCATTAAAGCGCCCAG+TGG | 0.730706 | 2.1:-62738164 | None:intergenic |
| AGTTGATGGATCAAATCACG+GGG | 0.752220 | 2.1:+62743679 | MS.gene003175:CDS |
| AAATCACACTCACTACATGG+AGG | 0.757919 | 2.1:-62740493 | None:intergenic |
| TCGAACTGAATCACACACGG+AGG | 0.793288 | 2.1:+62738141 | MS.gene003175:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 62736833 | 62745948 | 62736833 | ID=MS.gene003175 |
| chr2.1 | mRNA | 62736833 | 62745948 | 62736833 | ID=MS.gene003175.t1;Parent=MS.gene003175 |
| chr2.1 | exon | 62736833 | 62736937 | 62736833 | ID=MS.gene003175.t1.exon1;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62736833 | 62736937 | 62736833 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62737392 | 62737471 | 62737392 | ID=MS.gene003175.t1.exon2;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62737392 | 62737471 | 62737392 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62737576 | 62737747 | 62737576 | ID=MS.gene003175.t1.exon3;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62737576 | 62737747 | 62737576 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62737856 | 62737978 | 62737856 | ID=MS.gene003175.t1.exon4;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62737856 | 62737978 | 62737856 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62738124 | 62738297 | 62738124 | ID=MS.gene003175.t1.exon5;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62738124 | 62738297 | 62738124 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62738512 | 62738622 | 62738512 | ID=MS.gene003175.t1.exon6;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62738512 | 62738622 | 62738512 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62738716 | 62738852 | 62738716 | ID=MS.gene003175.t1.exon7;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62738716 | 62738852 | 62738716 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62738938 | 62739031 | 62738938 | ID=MS.gene003175.t1.exon8;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62738938 | 62739031 | 62738938 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62739548 | 62739637 | 62739548 | ID=MS.gene003175.t1.exon9;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62739548 | 62739637 | 62739548 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62739771 | 62739907 | 62739771 | ID=MS.gene003175.t1.exon10;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62739771 | 62739907 | 62739771 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62740021 | 62740118 | 62740021 | ID=MS.gene003175.t1.exon11;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62740021 | 62740118 | 62740021 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62740287 | 62740404 | 62740287 | ID=MS.gene003175.t1.exon12;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62740287 | 62740404 | 62740287 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62740489 | 62740576 | 62740489 | ID=MS.gene003175.t1.exon13;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62740489 | 62740576 | 62740489 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62740669 | 62740768 | 62740669 | ID=MS.gene003175.t1.exon14;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62740669 | 62740768 | 62740669 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62740867 | 62740919 | 62740867 | ID=MS.gene003175.t1.exon15;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62740867 | 62740919 | 62740867 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62741423 | 62741599 | 62741423 | ID=MS.gene003175.t1.exon16;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62741423 | 62741599 | 62741423 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62741686 | 62741723 | 62741686 | ID=MS.gene003175.t1.exon17;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62741686 | 62741723 | 62741686 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62742556 | 62742646 | 62742556 | ID=MS.gene003175.t1.exon18;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62742556 | 62742646 | 62742556 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62743343 | 62743522 | 62743343 | ID=MS.gene003175.t1.exon19;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62743343 | 62743522 | 62743343 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62743617 | 62743725 | 62743617 | ID=MS.gene003175.t1.exon20;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62743617 | 62743725 | 62743617 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62743817 | 62743886 | 62743817 | ID=MS.gene003175.t1.exon21;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62743817 | 62743886 | 62743817 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62744165 | 62744300 | 62744165 | ID=MS.gene003175.t1.exon22;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62744165 | 62744300 | 62744165 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62744751 | 62744879 | 62744751 | ID=MS.gene003175.t1.exon23;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62744751 | 62744879 | 62744751 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62745220 | 62745345 | 62745220 | ID=MS.gene003175.t1.exon24;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62745220 | 62745345 | 62745220 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62745543 | 62745608 | 62745543 | ID=MS.gene003175.t1.exon25;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62745543 | 62745608 | 62745543 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| chr2.1 | exon | 62745733 | 62745948 | 62745733 | ID=MS.gene003175.t1.exon26;Parent=MS.gene003175.t1 |
| chr2.1 | CDS | 62745733 | 62745948 | 62745733 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
| Gene Sequence |
| Protein sequence |