Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003175.t1 | AES64635.2 | 95.7 | 984 | 42 | 0 | 1 | 984 | 1 | 984 | 0.00E+00 | 1856.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003175.t1 | Q9XIK4 | 67.3 | 1005 | 300 | 9 | 1 | 979 | 1 | 1002 | 0.0e+00 | 1293.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003175.t1 | G7ISQ3 | 95.7 | 984 | 42 | 0 | 1 | 984 | 1 | 984 | 0.0e+00 | 1856.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003175.t1 | MTR_2g028030 | 95.323 | 1005 | 46 | 1 | 1 | 1004 | 1 | 1005 | 0.0 | 1979 |
MS.gene003175.t1 | MTR_8g092060 | 75.194 | 1032 | 226 | 9 | 1 | 1005 | 1 | 1029 | 0.0 | 1544 |
MS.gene003175.t1 | MTR_2g449880 | 76.190 | 42 | 10 | 0 | 634 | 675 | 32 | 73 | 1.53e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003175.t1 | AT1G10490 | 66.440 | 1031 | 317 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1328 |
MS.gene003175.t1 | AT1G10490 | 66.440 | 1031 | 317 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1328 |
MS.gene003175.t1 | AT3G57940 | 68.316 | 950 | 288 | 5 | 1 | 938 | 1 | 949 | 0.0 | 1291 |
MS.gene003175.t1 | AT3G57940 | 68.000 | 950 | 286 | 6 | 1 | 938 | 1 | 944 | 0.0 | 1277 |
Find 186 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCATCAAGTTGTTCTTTA+AGG | 0.094886 | 2.1:-62738553 | None:intergenic |
TGATTCTTTCAGTAGCTTTA+TGG | 0.119567 | 2.1:-62739583 | None:intergenic |
CTTGGTGGAGCCTGTATTTC+AGG | 0.125854 | 2.1:-62742602 | None:intergenic |
ATTGAGGAAGAGGGGTTTAT+TGG | 0.178337 | 2.1:+62737609 | MS.gene003175:CDS |
CATTACATTGGTGTCTCATT+TGG | 0.200504 | 2.1:+62743430 | MS.gene003175:CDS |
AAAAGCTGTTGTCACATTTA+TGG | 0.211036 | 2.1:+62738718 | MS.gene003175:CDS |
AAAATTCTGGGTAGTACTTT+TGG | 0.212769 | 2.1:+62737709 | MS.gene003175:CDS |
AATAACTCGTTGTTTGTATA+AGG | 0.235420 | 2.1:+62737678 | MS.gene003175:CDS |
GAAGACAGGAAGACTAAATA+TGG | 0.250031 | 2.1:-62739873 | None:intergenic |
TTCCTGTCTTCTACTGTTAA+TGG | 0.250402 | 2.1:+62739885 | MS.gene003175:CDS |
CTTTAATTTCAGCTTGGTTA+TGG | 0.254393 | 2.1:+62741674 | MS.gene003175:intron |
GTTGTTCTTTAAGGTTCTTC+AGG | 0.268516 | 2.1:-62738544 | None:intergenic |
GGAACCTCTTGGTGTATCTT+TGG | 0.285841 | 2.1:+62745551 | MS.gene003175:CDS |
GAATGTTGATTCGATCTTCT+TGG | 0.294677 | 2.1:-62745308 | None:intergenic |
ATGTTCAAACCTTGGTAAAA+TGG | 0.303520 | 2.1:-62743713 | None:intergenic |
TAAGGATTCAGACAAAATTC+TGG | 0.306572 | 2.1:+62737696 | MS.gene003175:CDS |
ACATCAGAGGGCACTGATTC+TGG | 0.315070 | 2.1:+62740097 | MS.gene003175:CDS |
GCTCTTGGTTTATCTATTGC+TGG | 0.316573 | 2.1:+62738815 | MS.gene003175:CDS |
ATTACATTGGTGTCTCATTT+GGG | 0.317586 | 2.1:+62743431 | MS.gene003175:CDS |
ATTCAGTTCGAAATCTTTCA+TGG | 0.322534 | 2.1:-62738129 | None:intergenic |
TCCTGTCTTCTACTGTTAAT+GGG | 0.330482 | 2.1:+62739886 | MS.gene003175:CDS |
AGAAATAACCTGCTAAGATT+AGG | 0.335625 | 2.1:-62740391 | None:intergenic |
CCAATGTAATGAAGCTTCTC+TGG | 0.343452 | 2.1:-62743418 | None:intergenic |
GTAATGTGATGCAACATATA+AGG | 0.350439 | 2.1:-62740679 | None:intergenic |
GACATCAGCTGTAGATCATT+TGG | 0.350952 | 2.1:-62740711 | None:intergenic |
AAGTTTCACTCCACTCCTAA+TGG | 0.353131 | 2.1:-62745839 | None:intergenic |
CTGGCGATCCCATTGAAAAC+TGG | 0.354899 | 2.1:+62740329 | MS.gene003175:CDS |
AAGTGCTGTTGTTGCCTTGT+TGG | 0.361862 | 2.1:+62738766 | MS.gene003175:CDS |
CACCACTTATTTGTACTACT+TGG | 0.363582 | 2.1:+62740747 | MS.gene003175:CDS |
TGATTCTTTGATTCATCAAC+AGG | 0.363807 | 2.1:-62740869 | None:intergenic |
TTGCATTGGTCTGCAAAATC+AGG | 0.367543 | 2.1:+62744840 | MS.gene003175:CDS |
ATCTTCCACGTTTCGTGGCA+TGG | 0.386368 | 2.1:+62743845 | MS.gene003175:CDS |
TTGCTGGAGCCGTTGCTGTT+GGG | 0.386520 | 2.1:+62738831 | MS.gene003175:CDS |
CGACTAAAGGCTTATGTTGA+TGG | 0.386670 | 2.1:+62744259 | MS.gene003175:CDS |
CTTCTATCTTCCACGTTTCG+TGG | 0.394509 | 2.1:+62743840 | MS.gene003175:CDS |
TACCTATTTCATCTCACATA+AGG | 0.396827 | 2.1:+62738248 | MS.gene003175:CDS |
TAGAAAACTTAACTGGAATC+TGG | 0.397069 | 2.1:-62743513 | None:intergenic |
GTGAAGGAAAATTTGTGTCT+TGG | 0.397805 | 2.1:-62741527 | None:intergenic |
TACATACAGGTTTGTCTTGA+GGG | 0.398420 | 2.1:+62741414 | MS.gene003175:intron |
GCTCTCGCAAGTTGAATTGT+TGG | 0.401328 | 2.1:+62739797 | MS.gene003175:CDS |
AATGATGAAATTGAAGTTGA+TGG | 0.405431 | 2.1:+62743665 | MS.gene003175:CDS |
TGGATGACGCACAAAATATC+AGG | 0.406769 | 2.1:-62740896 | None:intergenic |
GAAATAACCTGCTAAGATTA+GGG | 0.409631 | 2.1:-62740390 | None:intergenic |
AGGACCATGTTTGTCATCAT+TGG | 0.411257 | 2.1:+62736896 | MS.gene003175:CDS |
AAAATACAAATGAGTAATGA+TGG | 0.412396 | 2.1:-62744767 | None:intergenic |
TCTGCAGCTTCTGTAACTCT+TGG | 0.415583 | 2.1:-62742620 | None:intergenic |
TTGCAAGGCATGTGTGTTCA+TGG | 0.416518 | 2.1:+62738207 | MS.gene003175:CDS |
TTTAATTCAATAGGGACAAA+TGG | 0.416536 | 2.1:+62745207 | MS.gene003175:intron |
GACCTTATGTGAGATGAAAT+AGG | 0.418137 | 2.1:-62738250 | None:intergenic |
CGAGGGAAATCAGCTGCTCT+TGG | 0.418892 | 2.1:+62738800 | MS.gene003175:CDS |
TTGTTGGCTGCTCGTGGCCG+AGG | 0.420581 | 2.1:+62738782 | MS.gene003175:CDS |
ATTGTTCGTGCTAGGAGATT+AGG | 0.422097 | 2.1:-62737874 | None:intergenic |
AGCAGTGGTCGTCAACCATT+TGG | 0.423050 | 2.1:+62741471 | MS.gene003175:CDS |
GTGATTTATACTATGTCAAT+CGG | 0.424115 | 2.1:+62740509 | MS.gene003175:CDS |
GACGACCACTGCTCAAACTC+TGG | 0.424946 | 2.1:-62741461 | None:intergenic |
TCAATATCCATCTCAGAGAT+AGG | 0.427542 | 2.1:-62742578 | None:intergenic |
GACGGTTGAGGGAGGAGGTC+TGG | 0.430882 | 2.1:+62737900 | MS.gene003175:CDS |
GAATCCATCAGATATGCTTC+TGG | 0.434652 | 2.1:+62740310 | MS.gene003175:CDS |
GAATCACACACGGAGGCCAC+TGG | 0.437897 | 2.1:+62738148 | MS.gene003175:CDS |
GCACCACAGACAGACAATTC+AGG | 0.439083 | 2.1:+62739616 | MS.gene003175:CDS |
TTATTGCTGTGAAAGCCATT+AGG | 0.453352 | 2.1:+62745824 | MS.gene003175:CDS |
AGTACCTCATTGACAGAAAC+CGG | 0.455246 | 2.1:-62738280 | None:intergenic |
ATCAGTGCCCTCTGATGTCT+TGG | 0.457793 | 2.1:-62740092 | None:intergenic |
CATGGAATTTGATCGCCAAA+TGG | 0.460355 | 2.1:-62741486 | None:intergenic |
GCTTCTGTGTTACTTTGCAT+TGG | 0.464108 | 2.1:+62744826 | MS.gene003175:CDS |
GCAGCTTCTGTAACTCTTGG+TGG | 0.467911 | 2.1:-62742617 | None:intergenic |
CCTGTAGTGAAGTCTTTGCT+TGG | 0.468559 | 2.1:+62739849 | MS.gene003175:CDS |
TGCTTGTAAATTTGCGTGAA+AGG | 0.470146 | 2.1:+62743392 | MS.gene003175:CDS |
TGTAAAACAGACTCAAAGTC+AGG | 0.473602 | 2.1:-62745769 | None:intergenic |
CTTCTCATAAACATCACAAA+TGG | 0.476260 | 2.1:-62737649 | None:intergenic |
GACTGGATTTGATCTGTGCC+TGG | 0.476341 | 2.1:-62737418 | None:intergenic |
GGATATTGAACCTGAAATAC+AGG | 0.477216 | 2.1:+62742592 | MS.gene003175:CDS |
TTTATCTGCACTTGACTACA+AGG | 0.477413 | 2.1:+62739010 | MS.gene003175:CDS |
GAAGTGTTGCACAATGGATC+AGG | 0.478725 | 2.1:+62738601 | MS.gene003175:CDS |
TTACATACAGGTTTGTCTTG+AGG | 0.480191 | 2.1:+62741413 | MS.gene003175:intron |
TACATGTTGGACCATTGATC+AGG | 0.480671 | 2.1:+62738579 | MS.gene003175:CDS |
GAAATTACCCTCATGGCACT+TGG | 0.481815 | 2.1:-62741585 | None:intergenic |
ATTGCTGGAGCCGTTGCTGT+TGG | 0.482794 | 2.1:+62738830 | MS.gene003175:CDS |
AATTGCTCACAGAATTTCCA+TGG | 0.484074 | 2.1:-62741504 | None:intergenic |
CACAAATGGATCAGCTCTAT+CGG | 0.484503 | 2.1:-62737635 | None:intergenic |
AAGGATTCAGACAAAATTCT+GGG | 0.485701 | 2.1:+62737697 | MS.gene003175:CDS |
TTTACACTGGACAGTTATGA+AGG | 0.489444 | 2.1:+62740007 | MS.gene003175:intron |
AAATTTAAGCTTCCTCCAAA+AGG | 0.493708 | 2.1:-62743473 | None:intergenic |
TATCTTTGTGATAAGAAAAG+AGG | 0.495526 | 2.1:-62740537 | None:intergenic |
GGGGCAGATATCTTGTCATT+CGG | 0.497781 | 2.1:+62741434 | MS.gene003175:CDS |
TGTAAAGCTGACAATTCAAC+CGG | 0.500346 | 2.1:-62744802 | None:intergenic |
CTTGATGAAACTTTACATGT+TGG | 0.500629 | 2.1:+62738566 | MS.gene003175:CDS |
TGATAATTTATCCAGGATCA+TGG | 0.501330 | 2.1:+62744150 | MS.gene003175:intron |
AGTACAAATAAGTGGTGTGC+TGG | 0.505222 | 2.1:-62740741 | None:intergenic |
GACTGGTGAGCATTCATGTA+TGG | 0.506125 | 2.1:+62743625 | MS.gene003175:CDS |
CTTGTTTAGCTGCATTATTG+AGG | 0.507282 | 2.1:-62745581 | None:intergenic |
CGCAAATTTACAAGCAGATG+AGG | 0.513157 | 2.1:-62743385 | None:intergenic |
TTGTTTGAATTTGTATGCAA+AGG | 0.513684 | 2.1:+62738987 | MS.gene003175:CDS |
GTGCAACACTTCCTGATCAA+TGG | 0.516478 | 2.1:-62738590 | None:intergenic |
TCAGGACATTTCGTACATTG+AGG | 0.519644 | 2.1:+62744858 | MS.gene003175:CDS |
CTGGACAGTTATGAAGGTAC+TGG | 0.524083 | 2.1:+62740013 | MS.gene003175:intron |
TAGACTGTCATGGAACCTCT+TGG | 0.524527 | 2.1:+62745540 | MS.gene003175:intron |
CATTTGGCGATCAAATTCCA+TGG | 0.524670 | 2.1:+62741487 | MS.gene003175:CDS |
GAGTGGAGTGAAACTTCAAA+AGG | 0.526023 | 2.1:+62745846 | MS.gene003175:CDS |
ACACCATAAAACAGTAGGAC+TGG | 0.528915 | 2.1:-62737435 | None:intergenic |
AAGTTCTACAAACATCTAGA+TGG | 0.529281 | 2.1:+62745277 | MS.gene003175:CDS |
AGTTACAGAAGCTGCAGAGA+AGG | 0.530578 | 2.1:+62742625 | MS.gene003175:CDS |
ATGCCATCCCTAATCTTAGC+AGG | 0.531640 | 2.1:+62740383 | MS.gene003175:CDS |
AAGTTGATGGATCAAATCAC+GGG | 0.532334 | 2.1:+62743678 | MS.gene003175:CDS |
ATTATCACTCGCTTCTTGCA+AGG | 0.534075 | 2.1:+62738192 | MS.gene003175:CDS |
GGATGATATGAAGTTAAAAG+AGG | 0.535288 | 2.1:+62745732 | MS.gene003175:intron |
TGTCTCATTTGGGCTAACAC+TGG | 0.536798 | 2.1:+62743441 | MS.gene003175:CDS |
TCTTCATTACATGCTTAGCC+AGG | 0.537572 | 2.1:+62737400 | MS.gene003175:CDS |
GTTGCCTTGTTGGCTGCTCG+TGG | 0.538068 | 2.1:+62738776 | MS.gene003175:CDS |
GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 2.1:-62743499 | None:intergenic |
ATCAGAACTCTCATTGAGAA+TGG | 0.540090 | 2.1:+62736857 | MS.gene003175:CDS |
TGATTTATACTATGTCAATC+GGG | 0.541521 | 2.1:+62740510 | MS.gene003175:CDS |
TACCAAGTAGTACAAATAAG+TGG | 0.541889 | 2.1:-62740749 | None:intergenic |
CCAAGCAAAGACTTCACTAC+AGG | 0.542464 | 2.1:-62739849 | None:intergenic |
AGATGAGGAAGATCTGTCCT+TGG | 0.543526 | 2.1:-62743370 | None:intergenic |
GCAGAGTGACATGAGGAAGA+AGG | 0.548876 | 2.1:+62736823 | None:intergenic |
TGTTGGCTGCTCGTGGCCGA+GGG | 0.550071 | 2.1:+62738783 | MS.gene003175:CDS |
ATAGAGACGGTTGAGGGAGG+AGG | 0.552978 | 2.1:+62737895 | MS.gene003175:CDS |
ATATGATATGAAGCGACTAA+AGG | 0.556805 | 2.1:+62744246 | MS.gene003175:CDS |
TCAATTTCATCATTGTCAAG+AGG | 0.557706 | 2.1:-62743656 | None:intergenic |
ACCCATTAACAGTAGAAGAC+AGG | 0.559079 | 2.1:-62739887 | None:intergenic |
TATAAATCACACTCACTACA+TGG | 0.560842 | 2.1:-62740496 | None:intergenic |
AAGACAGGAAGACTAAATAT+GGG | 0.562279 | 2.1:-62739872 | None:intergenic |
CCAGAGAAGCTTCATTACAT+TGG | 0.566084 | 2.1:+62743418 | MS.gene003175:CDS |
GCTGTCTACAGTTACTATGA+AGG | 0.566578 | 2.1:+62742545 | MS.gene003175:intron |
ATTGACAGAAACCGGAGTGA+TGG | 0.567213 | 2.1:-62738272 | None:intergenic |
ACTTACTCCTATCTCTGAGA+TGG | 0.568913 | 2.1:+62742571 | MS.gene003175:CDS |
AATCACACACGGAGGCCACT+GGG | 0.572127 | 2.1:+62738149 | MS.gene003175:CDS |
GAAGTTGATGGATCAAATCA+CGG | 0.573925 | 2.1:+62743677 | MS.gene003175:CDS |
TGGATTACAAGCTTGCTATG+AGG | 0.574233 | 2.1:+62743865 | MS.gene003175:CDS |
CAATGTAATGAAGCTTCTCT+GGG | 0.575197 | 2.1:-62743417 | None:intergenic |
ATCGCCAGAAGCATATCTGA+TGG | 0.576905 | 2.1:-62740314 | None:intergenic |
TCGGCCACGAGCAGCCAACA+AGG | 0.578090 | 2.1:-62738780 | None:intergenic |
TAATGCAGCTAAACAAGTTG+AGG | 0.579381 | 2.1:+62745587 | MS.gene003175:CDS |
TCACATAAGGTCCATCACTC+CGG | 0.580462 | 2.1:+62738261 | MS.gene003175:CDS |
AAATTACCCTCATGGCACTT+GGG | 0.582738 | 2.1:-62741584 | None:intergenic |
CAAGAGCAGCTGATTTCCCT+CGG | 0.585819 | 2.1:-62738799 | None:intergenic |
TTACCTGAATTGTCTGTCTG+TGG | 0.586384 | 2.1:-62739619 | None:intergenic |
GTGGACTCCCTAGACTGTCA+TGG | 0.586723 | 2.1:+62745530 | MS.gene003175:intron |
GGGACAAATGGAGCTGAAAG+AGG | 0.588341 | 2.1:+62745219 | MS.gene003175:intron |
AAATACAAATGAGTAATGAT+GGG | 0.588849 | 2.1:-62744766 | None:intergenic |
AAAGACTTCACTACAGGCAG+TGG | 0.593286 | 2.1:-62739843 | None:intergenic |
ATCTTTGTGATAAGAAAAGA+GGG | 0.593501 | 2.1:-62740536 | None:intergenic |
ACGAACAATAGAGACGGTTG+AGG | 0.595470 | 2.1:+62737888 | MS.gene003175:CDS |
CCGTCTCTATTGTTCGTGCT+AGG | 0.600815 | 2.1:-62737882 | None:intergenic |
ACTTGACAGAATACTGTGAC+TGG | 0.603222 | 2.1:+62743608 | MS.gene003175:intron |
TAACCTGCTAAGATTAGGGA+TGG | 0.603288 | 2.1:-62740386 | None:intergenic |
GGCATATTACCCAACAGCAA+CGG | 0.605207 | 2.1:-62738840 | None:intergenic |
TTCAGTAGCTTTATGGAACG+CGG | 0.608593 | 2.1:-62739576 | None:intergenic |
GTAATCCATGCCACGAAACG+TGG | 0.610532 | 2.1:-62743850 | None:intergenic |
GATTCTGCCAAGACATCAGA+GGG | 0.612667 | 2.1:+62740085 | MS.gene003175:CDS |
GAGTGACATGAGGAAGAAGG+TGG | 0.613554 | 2.1:+62736826 | None:intergenic |
CTCACCACACGAAACTCGTA+AGG | 0.614225 | 2.1:-62744283 | None:intergenic |
CGAACAATAGAGACGGTTGA+GGG | 0.620193 | 2.1:+62737889 | MS.gene003175:CDS |
TACACACCCAAGTGCCATGA+GGG | 0.621730 | 2.1:+62741578 | MS.gene003175:CDS |
TCAGTAGCTTTATGGAACGC+GGG | 0.622619 | 2.1:-62739575 | None:intergenic |
TGATTCTGCCAAGACATCAG+AGG | 0.622894 | 2.1:+62740084 | MS.gene003175:CDS |
TTGTAACACCATAAAACAGT+AGG | 0.624455 | 2.1:-62737440 | None:intergenic |
GCTTACATGTTTGTACACAA+TGG | 0.626330 | 2.1:+62737951 | MS.gene003175:CDS |
ACATACAGGTTTGTCTTGAG+GGG | 0.631624 | 2.1:+62741415 | MS.gene003175:intron |
TATGGTGTTACAAGGACAAG+CGG | 0.632282 | 2.1:+62737450 | MS.gene003175:CDS |
CACTCCGGTTTCTGTCAATG+AGG | 0.633545 | 2.1:+62738276 | MS.gene003175:CDS |
TGGTGATAAGTATTATGACC+AGG | 0.637720 | 2.1:+62736916 | MS.gene003175:CDS |
ATGCGAGCACCTGAAAGTGA+AGG | 0.643010 | 2.1:-62741543 | None:intergenic |
TTGAGAATGGTGTTAAAACA+AGG | 0.644119 | 2.1:+62736870 | MS.gene003175:CDS |
TTTGCATACAAATTCAAACA+AGG | 0.646718 | 2.1:-62738985 | None:intergenic |
ATGGTGTTAAAACAAGGCAC+AGG | 0.646966 | 2.1:+62736876 | MS.gene003175:CDS |
GATCAGGAAGTGTTGCACAA+TGG | 0.652566 | 2.1:+62738595 | MS.gene003175:CDS |
ATGTTTGTACACAATGGTGA+TGG | 0.656217 | 2.1:+62737957 | MS.gene003175:CDS |
ACAATAGAGACGGTTGAGGG+AGG | 0.659463 | 2.1:+62737892 | MS.gene003175:CDS |
TTGAAGAAAACGTAAAACCA+AGG | 0.662051 | 2.1:+62743353 | MS.gene003175:CDS |
ACAGCAATAACACCATCAGA+TGG | 0.662972 | 2.1:-62745811 | None:intergenic |
CAATGTATAGGAATTTGATG+TGG | 0.663176 | 2.1:+62739538 | MS.gene003175:intron |
GCTGTGAAAGCCATTAGGAG+TGG | 0.672918 | 2.1:+62745829 | MS.gene003175:CDS |
ATCACCAATGATGACAAACA+TGG | 0.686674 | 2.1:-62736900 | None:intergenic |
GCAATCCAGAGTTTGAGCAG+TGG | 0.690063 | 2.1:+62741456 | MS.gene003175:CDS |
TTTATGCTATAGGACTCTGA+AGG | 0.690132 | 2.1:+62738500 | MS.gene003175:intron |
CCTAGCACGAACAATAGAGA+CGG | 0.692555 | 2.1:+62737882 | MS.gene003175:CDS |
CTACACACCCAAGTGCCATG+AGG | 0.695468 | 2.1:+62741577 | MS.gene003175:CDS |
TGGTCCTTACGAGTTTCGTG+TGG | 0.696733 | 2.1:+62744279 | MS.gene003175:CDS |
TCATCCAAAGATACACCAAG+AGG | 0.706728 | 2.1:-62745555 | None:intergenic |
ATTTCGAACTGAATCACACA+CGG | 0.725164 | 2.1:+62738138 | MS.gene003175:CDS |
GCGTTCATTAAAGCGCCCAG+TGG | 0.730706 | 2.1:-62738164 | None:intergenic |
AGTTGATGGATCAAATCACG+GGG | 0.752220 | 2.1:+62743679 | MS.gene003175:CDS |
AAATCACACTCACTACATGG+AGG | 0.757919 | 2.1:-62740493 | None:intergenic |
TCGAACTGAATCACACACGG+AGG | 0.793288 | 2.1:+62738141 | MS.gene003175:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 62736833 | 62745948 | 62736833 | ID=MS.gene003175 |
chr2.1 | mRNA | 62736833 | 62745948 | 62736833 | ID=MS.gene003175.t1;Parent=MS.gene003175 |
chr2.1 | exon | 62736833 | 62736937 | 62736833 | ID=MS.gene003175.t1.exon1;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62736833 | 62736937 | 62736833 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62737392 | 62737471 | 62737392 | ID=MS.gene003175.t1.exon2;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62737392 | 62737471 | 62737392 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62737576 | 62737747 | 62737576 | ID=MS.gene003175.t1.exon3;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62737576 | 62737747 | 62737576 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62737856 | 62737978 | 62737856 | ID=MS.gene003175.t1.exon4;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62737856 | 62737978 | 62737856 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62738124 | 62738297 | 62738124 | ID=MS.gene003175.t1.exon5;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62738124 | 62738297 | 62738124 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62738512 | 62738622 | 62738512 | ID=MS.gene003175.t1.exon6;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62738512 | 62738622 | 62738512 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62738716 | 62738852 | 62738716 | ID=MS.gene003175.t1.exon7;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62738716 | 62738852 | 62738716 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62738938 | 62739031 | 62738938 | ID=MS.gene003175.t1.exon8;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62738938 | 62739031 | 62738938 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62739548 | 62739637 | 62739548 | ID=MS.gene003175.t1.exon9;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62739548 | 62739637 | 62739548 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62739771 | 62739907 | 62739771 | ID=MS.gene003175.t1.exon10;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62739771 | 62739907 | 62739771 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62740021 | 62740118 | 62740021 | ID=MS.gene003175.t1.exon11;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62740021 | 62740118 | 62740021 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62740287 | 62740404 | 62740287 | ID=MS.gene003175.t1.exon12;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62740287 | 62740404 | 62740287 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62740489 | 62740576 | 62740489 | ID=MS.gene003175.t1.exon13;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62740489 | 62740576 | 62740489 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62740669 | 62740768 | 62740669 | ID=MS.gene003175.t1.exon14;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62740669 | 62740768 | 62740669 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62740867 | 62740919 | 62740867 | ID=MS.gene003175.t1.exon15;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62740867 | 62740919 | 62740867 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62741423 | 62741599 | 62741423 | ID=MS.gene003175.t1.exon16;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62741423 | 62741599 | 62741423 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62741686 | 62741723 | 62741686 | ID=MS.gene003175.t1.exon17;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62741686 | 62741723 | 62741686 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62742556 | 62742646 | 62742556 | ID=MS.gene003175.t1.exon18;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62742556 | 62742646 | 62742556 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62743343 | 62743522 | 62743343 | ID=MS.gene003175.t1.exon19;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62743343 | 62743522 | 62743343 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62743617 | 62743725 | 62743617 | ID=MS.gene003175.t1.exon20;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62743617 | 62743725 | 62743617 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62743817 | 62743886 | 62743817 | ID=MS.gene003175.t1.exon21;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62743817 | 62743886 | 62743817 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62744165 | 62744300 | 62744165 | ID=MS.gene003175.t1.exon22;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62744165 | 62744300 | 62744165 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62744751 | 62744879 | 62744751 | ID=MS.gene003175.t1.exon23;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62744751 | 62744879 | 62744751 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62745220 | 62745345 | 62745220 | ID=MS.gene003175.t1.exon24;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62745220 | 62745345 | 62745220 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62745543 | 62745608 | 62745543 | ID=MS.gene003175.t1.exon25;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62745543 | 62745608 | 62745543 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
chr2.1 | exon | 62745733 | 62745948 | 62745733 | ID=MS.gene003175.t1.exon26;Parent=MS.gene003175.t1 |
chr2.1 | CDS | 62745733 | 62745948 | 62745733 | ID=cds.MS.gene003175.t1;Parent=MS.gene003175.t1 |
Gene Sequence |
Protein sequence |