Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02854.t1 | AES64635.2 | 95.9 | 984 | 40 | 0 | 1 | 984 | 1 | 984 | 0.00E+00 | 1855.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02854.t1 | Q9XIK4 | 67.5 | 1005 | 298 | 9 | 1 | 979 | 1 | 1002 | 0.0e+00 | 1293.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02854.t1 | G7ISQ3 | 95.9 | 984 | 40 | 0 | 1 | 984 | 1 | 984 | 0.0e+00 | 1855.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02854.t1 | MTR_2g028030 | 95.522 | 1005 | 44 | 1 | 1 | 1004 | 1 | 1005 | 0.0 | 1977 |
MS.gene02854.t1 | MTR_8g092060 | 75.388 | 1032 | 224 | 9 | 1 | 1005 | 1 | 1029 | 0.0 | 1541 |
MS.gene02854.t1 | MTR_2g449880 | 76.190 | 42 | 10 | 0 | 634 | 675 | 32 | 73 | 1.53e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02854.t1 | AT1G10490 | 66.634 | 1031 | 315 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1326 |
MS.gene02854.t1 | AT1G10490 | 66.634 | 1031 | 315 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1326 |
MS.gene02854.t1 | AT3G57940 | 68.526 | 950 | 286 | 5 | 1 | 938 | 1 | 949 | 0.0 | 1290 |
MS.gene02854.t1 | AT3G57940 | 68.211 | 950 | 284 | 6 | 1 | 938 | 1 | 944 | 0.0 | 1276 |
Find 186 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCAACTTCCTGATATTT+TGG | 0.067380 | 2.4:+61145630 | MS.gene02854:CDS |
TTTCATCAAGTTGTTCTTTA+AGG | 0.094886 | 2.4:-61143294 | None:intergenic |
TGATTCTTTCAGTAGCTTTA+TGG | 0.119567 | 2.4:-61144325 | None:intergenic |
CTTGGTGGAGCCTGTATTTC+AGG | 0.125854 | 2.4:-61147387 | None:intergenic |
ATTGAGGAAGAGGGGTTTAT+TGG | 0.178337 | 2.4:+61142351 | MS.gene02854:CDS |
CATTACATTGGTGTCTCATT+TGG | 0.200504 | 2.4:+61148215 | MS.gene02854:CDS |
AAAAGCTGTTGTCACATTTA+TGG | 0.211036 | 2.4:+61143459 | MS.gene02854:CDS |
AAAATTCTGGGTAGTACTTT+TGG | 0.212769 | 2.4:+61142451 | MS.gene02854:CDS |
AATAACTCGTTGTTTGTATA+AGG | 0.235420 | 2.4:+61142420 | MS.gene02854:CDS |
GAAGACAGGAAGACTAAATA+TGG | 0.250031 | 2.4:-61144615 | None:intergenic |
TTCCTGTCTTCTACTGTTAA+TGG | 0.250402 | 2.4:+61144627 | MS.gene02854:CDS |
CTTTAATTTCAGCTTGGTTA+TGG | 0.254393 | 2.4:+61146418 | MS.gene02854:intron |
GTTGTTCTTTAAGGTTCTTC+AGG | 0.268516 | 2.4:-61143285 | None:intergenic |
GGAACCTCTTAGTGTATCTT+TGG | 0.294002 | 2.4:+61150342 | MS.gene02854:CDS |
GAATGTTGATTCGATCTTCT+TGG | 0.294677 | 2.4:-61150099 | None:intergenic |
ATGTTCAAACCTTGGTAAAA+TGG | 0.303520 | 2.4:-61148505 | None:intergenic |
TAAGGATTCAGACAAAATTC+TGG | 0.306572 | 2.4:+61142438 | MS.gene02854:CDS |
ACATCAGAGGGCACTGATTC+TGG | 0.315070 | 2.4:+61144839 | MS.gene02854:CDS |
GCTCTTGGTTTATCTATTGC+TGG | 0.316573 | 2.4:+61143556 | MS.gene02854:CDS |
ATTACATTGGTGTCTCATTT+GGG | 0.317586 | 2.4:+61148216 | MS.gene02854:CDS |
ATTCAGTTCGAAATCTTTCA+TGG | 0.322534 | 2.4:-61142870 | None:intergenic |
TCCTGTCTTCTACTGTTAAT+GGG | 0.330482 | 2.4:+61144628 | MS.gene02854:CDS |
AGAAATAACCTGCTAAGATT+AGG | 0.335625 | 2.4:-61145135 | None:intergenic |
CCAATGTAATGAAGCTTCTC+TGG | 0.343452 | 2.4:-61148203 | None:intergenic |
GTAATGTGATGCAACATATA+AGG | 0.350439 | 2.4:-61145423 | None:intergenic |
GACATCAGCTGTAGATCATT+TGG | 0.350952 | 2.4:-61145455 | None:intergenic |
AAGTTTCACTCCACTCCTAA+TGG | 0.353131 | 2.4:-61150630 | None:intergenic |
CTGGCGATCCCATTGAAAAC+TGG | 0.354899 | 2.4:+61145073 | MS.gene02854:CDS |
AAGTGCTGTTGTTGCCTTGT+TGG | 0.361862 | 2.4:+61143507 | MS.gene02854:CDS |
CACCACTTATTTGTACTACT+TGG | 0.363582 | 2.4:+61145491 | MS.gene02854:CDS |
TGATTCTTTGATTCATCAAC+AGG | 0.363807 | 2.4:-61145613 | None:intergenic |
TTGCATTGGTCTGCAAAATC+AGG | 0.367543 | 2.4:+61149631 | MS.gene02854:CDS |
CTTGAAAATACAAATGAGTA+AGG | 0.369749 | 2.4:-61149562 | None:intergenic |
ATCTTCCACGTTTCGTGGCA+TGG | 0.386368 | 2.4:+61148637 | MS.gene02854:CDS |
TTGCTGGAGCCGTTGCTGTT+GGG | 0.386520 | 2.4:+61143572 | MS.gene02854:CDS |
CGACTAAAGGCTTATGTTGA+TGG | 0.386670 | 2.4:+61149051 | MS.gene02854:CDS |
TGGATGACGCCCAAAATATC+AGG | 0.390547 | 2.4:-61145640 | None:intergenic |
CTTCTATCTTCCACGTTTCG+TGG | 0.394509 | 2.4:+61148632 | MS.gene02854:CDS |
TACCTATTTCATCTCACATA+AGG | 0.396827 | 2.4:+61142989 | MS.gene02854:CDS |
TAGAAAACTTAACTGGAATC+TGG | 0.397069 | 2.4:-61148298 | None:intergenic |
GTGAAGGAAAATTTGTGTCT+TGG | 0.397805 | 2.4:-61146271 | None:intergenic |
TACATACAGGTTTGTCTTGA+GGG | 0.398420 | 2.4:+61146158 | MS.gene02854:intron |
GCTCTCGCAAGTTGAATTGT+TGG | 0.401328 | 2.4:+61144539 | MS.gene02854:CDS |
AATGATGAAATTGAAGTTGA+TGG | 0.405431 | 2.4:+61148457 | MS.gene02854:CDS |
GAAATAACCTGCTAAGATTA+GGG | 0.409631 | 2.4:-61145134 | None:intergenic |
ATTGTTCGTGCTAGGAGATT+AGG | 0.410467 | 2.4:-61142615 | None:intergenic |
TCTGCAGCTTCTGTAACTCT+TGG | 0.415583 | 2.4:-61147405 | None:intergenic |
TTGCAAGGCATGTGTGTTCA+TGG | 0.416518 | 2.4:+61142948 | MS.gene02854:CDS |
TTTAATTCAATAGGGACAAA+TGG | 0.416536 | 2.4:+61149998 | MS.gene02854:intron |
GACCTTATGTGAGATGAAAT+AGG | 0.418137 | 2.4:-61142991 | None:intergenic |
CGAGGGAAATCAGCTGCTCT+TGG | 0.418892 | 2.4:+61143541 | MS.gene02854:CDS |
TTGTTGGCTGCTCGTGGCCG+AGG | 0.420581 | 2.4:+61143523 | MS.gene02854:CDS |
AGCAGTGGTCGTCAACCATT+TGG | 0.423050 | 2.4:+61146215 | MS.gene02854:CDS |
GTGATTTATACTATGTCAAT+CGG | 0.424115 | 2.4:+61145253 | MS.gene02854:CDS |
GACGACCACTGCTCAAACTC+TGG | 0.424946 | 2.4:-61146205 | None:intergenic |
TCAATATCCATCTCAGAGAT+AGG | 0.427542 | 2.4:-61147363 | None:intergenic |
AGGTCCATGTTTGTCATCAT+TGG | 0.430880 | 2.4:+61141641 | MS.gene02854:CDS |
GACGGTTGAGGGAGGAGGTC+TGG | 0.430882 | 2.4:+61142641 | MS.gene02854:CDS |
GAATCCATCAGATATGCTTC+TGG | 0.434652 | 2.4:+61145054 | MS.gene02854:CDS |
GAATCACACACGGAGGCCAC+TGG | 0.437897 | 2.4:+61142889 | MS.gene02854:CDS |
GCACCACGGACAGACAATTC+AGG | 0.438378 | 2.4:+61144358 | MS.gene02854:CDS |
TTATTGCTGTGAAAGCCATT+AGG | 0.453352 | 2.4:+61150615 | MS.gene02854:CDS |
AGTACCTCATTGACAGAAAC+CGG | 0.455246 | 2.4:-61143021 | None:intergenic |
ATCAGTGCCCTCTGATGTCT+TGG | 0.457793 | 2.4:-61144834 | None:intergenic |
CATGGAATTTGATCGCCAAA+TGG | 0.460355 | 2.4:-61146230 | None:intergenic |
GCTTCTGTGTTACTTTGCAT+TGG | 0.464108 | 2.4:+61149617 | MS.gene02854:CDS |
GCAGCTTCTGTAACTCTTGG+TGG | 0.467911 | 2.4:-61147402 | None:intergenic |
CCTGTAGTGAAGTCTTTGCT+TGG | 0.468559 | 2.4:+61144591 | MS.gene02854:CDS |
TGTAAAACAGACTCAAAGTC+AGG | 0.473602 | 2.4:-61150560 | None:intergenic |
AAAATACAAATGAGTAAGGA+TGG | 0.474098 | 2.4:-61149558 | None:intergenic |
GACTGGATTTGATCTGTGCC+TGG | 0.476341 | 2.4:-61142160 | None:intergenic |
GGATATTGAACCTGAAATAC+AGG | 0.477216 | 2.4:+61147377 | MS.gene02854:CDS |
TTTATCTGCACTTGACTACA+AGG | 0.477413 | 2.4:+61143752 | MS.gene02854:CDS |
GAAGTGTTGCACAATGGATC+AGG | 0.478725 | 2.4:+61143342 | MS.gene02854:CDS |
TTACATACAGGTTTGTCTTG+AGG | 0.480191 | 2.4:+61146157 | MS.gene02854:intron |
TACATGTTGGACCATTGATC+AGG | 0.480671 | 2.4:+61143320 | MS.gene02854:CDS |
GAAATTACCCTCATGGCACT+TGG | 0.481815 | 2.4:-61146329 | None:intergenic |
ATTGCTGGAGCCGTTGCTGT+TGG | 0.482794 | 2.4:+61143571 | MS.gene02854:CDS |
AATTGCTCACAGAATTTCCA+TGG | 0.484074 | 2.4:-61146248 | None:intergenic |
CACAAATGGATCAGCTCTAT+CGG | 0.484503 | 2.4:-61142377 | None:intergenic |
AAGGATTCAGACAAAATTCT+GGG | 0.485701 | 2.4:+61142439 | MS.gene02854:CDS |
TTTACACTGGACAGTTATGA+AGG | 0.489444 | 2.4:+61144749 | MS.gene02854:intron |
AAATTTAAGCTTCCTCCAAA+AGG | 0.493708 | 2.4:-61148258 | None:intergenic |
TATCTTTGTGATAAGAAAAG+AGG | 0.495526 | 2.4:-61145281 | None:intergenic |
GGGGCAGATATCTTGTCATT+CGG | 0.497781 | 2.4:+61146178 | MS.gene02854:CDS |
TGTAAAGCTGACAATTCAAC+CGG | 0.500346 | 2.4:-61149593 | None:intergenic |
CTTGATGAAACTTTACATGT+TGG | 0.500629 | 2.4:+61143307 | MS.gene02854:CDS |
TGATAATTTATCCAGGATCA+TGG | 0.501330 | 2.4:+61148942 | MS.gene02854:intron |
AGTACAAATAAGTGGTGTGC+TGG | 0.505222 | 2.4:-61145485 | None:intergenic |
GACTGGTGAGCATTCATGTA+TGG | 0.506125 | 2.4:+61148417 | MS.gene02854:CDS |
CTTGTTTAGCTGCATTATTG+AGG | 0.507282 | 2.4:-61150372 | None:intergenic |
CGCAAATTTACAAGCAGATG+AGG | 0.513157 | 2.4:-61148170 | None:intergenic |
TTGTTTGAATTTGTATGCAA+AGG | 0.513684 | 2.4:+61143729 | MS.gene02854:CDS |
GTGCAACACTTCCTGATCAA+TGG | 0.516478 | 2.4:-61143331 | None:intergenic |
TCAGGACATTTCGTACATTG+AGG | 0.519644 | 2.4:+61149649 | MS.gene02854:CDS |
CTGGACAGTTATGAAGGTAC+TGG | 0.524083 | 2.4:+61144755 | MS.gene02854:intron |
CATTTGGCGATCAAATTCCA+TGG | 0.524670 | 2.4:+61146231 | MS.gene02854:CDS |
GAGTGGAGTGAAACTTCAAA+AGG | 0.526023 | 2.4:+61150637 | MS.gene02854:CDS |
ACACCATAAAACAGTAGGAC+TGG | 0.528915 | 2.4:-61142177 | None:intergenic |
AAGTTCTACAAACATCTAGA+TGG | 0.529281 | 2.4:+61150068 | MS.gene02854:CDS |
AGTTACAGAAGCTGCAGAGA+AGG | 0.530578 | 2.4:+61147410 | MS.gene02854:CDS |
ATGCCATCCCTAATCTTAGC+AGG | 0.531640 | 2.4:+61145127 | MS.gene02854:CDS |
AAGTTGATGGATCAAATCAC+GGG | 0.532334 | 2.4:+61148470 | MS.gene02854:CDS |
ATTATCACTCGCTTCTTGCA+AGG | 0.534075 | 2.4:+61142933 | MS.gene02854:CDS |
GGATGATATGAAGTTAAAAG+AGG | 0.535288 | 2.4:+61150523 | MS.gene02854:intron |
TCTTCATTACATGCTTAGCC+AGG | 0.537572 | 2.4:+61142142 | MS.gene02854:CDS |
GTTGCCTTGTTGGCTGCTCG+TGG | 0.538068 | 2.4:+61143517 | MS.gene02854:CDS |
GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 2.4:-61148284 | None:intergenic |
ATCAGAACTCTCATTGAGAA+TGG | 0.540090 | 2.4:+61141602 | MS.gene02854:CDS |
TGATTTATACTATGTCAATC+GGG | 0.541521 | 2.4:+61145254 | MS.gene02854:CDS |
TACCAAGTAGTACAAATAAG+TGG | 0.541889 | 2.4:-61145493 | None:intergenic |
CCAAGCAAAGACTTCACTAC+AGG | 0.542464 | 2.4:-61144591 | None:intergenic |
AGATGAGGAAGATCTGTCCT+TGG | 0.543526 | 2.4:-61148155 | None:intergenic |
GCAGAGTGACATGAGGAAGA+AGG | 0.548876 | 2.4:+61141568 | None:intergenic |
TGTTGGCTGCTCGTGGCCGA+GGG | 0.550071 | 2.4:+61143524 | MS.gene02854:CDS |
ATAGAGACGGTTGAGGGAGG+AGG | 0.552978 | 2.4:+61142636 | MS.gene02854:CDS |
TGTCTCATTTGGGCTAACGC+TGG | 0.553244 | 2.4:+61148226 | MS.gene02854:CDS |
ATATGATATGAAGCGACTAA+AGG | 0.556805 | 2.4:+61149038 | MS.gene02854:CDS |
TCAATTTCATCATTGTCAAG+AGG | 0.557706 | 2.4:-61148448 | None:intergenic |
ACCCATTAACAGTAGAAGAC+AGG | 0.559079 | 2.4:-61144629 | None:intergenic |
TATAAATCACACTCACTACA+TGG | 0.560842 | 2.4:-61145240 | None:intergenic |
AAGACAGGAAGACTAAATAT+GGG | 0.562279 | 2.4:-61144614 | None:intergenic |
GCTGTCTACAGTTACTATGA+AGG | 0.566578 | 2.4:+61147330 | MS.gene02854:intron |
ATTGACAGAAACCGGAGTGA+TGG | 0.567213 | 2.4:-61143013 | None:intergenic |
ACTTACTCCTATCTCTGAGA+TGG | 0.568913 | 2.4:+61147356 | MS.gene02854:CDS |
AATCACACACGGAGGCCACT+GGG | 0.572127 | 2.4:+61142890 | MS.gene02854:CDS |
GAAGTTGATGGATCAAATCA+CGG | 0.573925 | 2.4:+61148469 | MS.gene02854:CDS |
TGGATTACAAGCTTGCTATG+AGG | 0.574233 | 2.4:+61148657 | MS.gene02854:CDS |
CCAGAGAAGCTTCATTACAT+TGG | 0.575108 | 2.4:+61148203 | MS.gene02854:CDS |
CAATGTAATGAAGCTTCTCT+GGG | 0.575197 | 2.4:-61148202 | None:intergenic |
ATCGCCAGAAGCATATCTGA+TGG | 0.576905 | 2.4:-61145058 | None:intergenic |
TCGGCCACGAGCAGCCAACA+AGG | 0.578090 | 2.4:-61143521 | None:intergenic |
TAATGCAGCTAAACAAGTTG+AGG | 0.579381 | 2.4:+61150378 | MS.gene02854:CDS |
TCACATAAGGTCCATCACTC+CGG | 0.580462 | 2.4:+61143002 | MS.gene02854:CDS |
AAATTACCCTCATGGCACTT+GGG | 0.582738 | 2.4:-61146328 | None:intergenic |
CAAGAGCAGCTGATTTCCCT+CGG | 0.585819 | 2.4:-61143540 | None:intergenic |
GTGGACTCCCTAGACTGTCA+TGG | 0.586723 | 2.4:+61150321 | MS.gene02854:intron |
GGGACAAATGGAGCTGAAAG+AGG | 0.588341 | 2.4:+61150010 | MS.gene02854:intron |
AAAGACTTCACTACAGGCAG+TGG | 0.593286 | 2.4:-61144585 | None:intergenic |
ATCTTTGTGATAAGAAAAGA+GGG | 0.593501 | 2.4:-61145280 | None:intergenic |
ACGAACAATAGAGACGGTTG+AGG | 0.595470 | 2.4:+61142629 | MS.gene02854:CDS |
TCGTCCAAAGATACACTAAG+AGG | 0.596200 | 2.4:-61150346 | None:intergenic |
CCGTCTCTATTGTTCGTGCT+AGG | 0.600815 | 2.4:-61142623 | None:intergenic |
ACTTGACAGAATACTGTGAC+TGG | 0.603222 | 2.4:+61148400 | MS.gene02854:intron |
TAACCTGCTAAGATTAGGGA+TGG | 0.603288 | 2.4:-61145130 | None:intergenic |
GGCATATTACCCAACAGCAA+CGG | 0.605207 | 2.4:-61143581 | None:intergenic |
TTCAGTAGCTTTATGGAACG+CGG | 0.608593 | 2.4:-61144318 | None:intergenic |
GTAATCCATGCCACGAAACG+TGG | 0.610532 | 2.4:-61148642 | None:intergenic |
GATTCTGCCAAGACATCAGA+GGG | 0.612667 | 2.4:+61144827 | MS.gene02854:CDS |
GAGTGACATGAGGAAGAAGG+TGG | 0.613554 | 2.4:+61141571 | None:intergenic |
CTCACCACACGAAACTCGTA+AGG | 0.614225 | 2.4:-61149075 | None:intergenic |
CGAACAATAGAGACGGTTGA+GGG | 0.620193 | 2.4:+61142630 | MS.gene02854:CDS |
TACACACCCAAGTGCCATGA+GGG | 0.621730 | 2.4:+61146322 | MS.gene02854:CDS |
TCAGTAGCTTTATGGAACGC+GGG | 0.622619 | 2.4:-61144317 | None:intergenic |
TGATTCTGCCAAGACATCAG+AGG | 0.622894 | 2.4:+61144826 | MS.gene02854:CDS |
AAATACAAATGAGTAAGGAT+GGG | 0.623146 | 2.4:-61149557 | None:intergenic |
TTGTAACACCATAAAACAGT+AGG | 0.624455 | 2.4:-61142182 | None:intergenic |
GCTTACATGTTTGTACACAA+TGG | 0.626330 | 2.4:+61142692 | MS.gene02854:CDS |
ACATACAGGTTTGTCTTGAG+GGG | 0.631624 | 2.4:+61146159 | MS.gene02854:intron |
TATGGTGTTACAAGGACAAG+CGG | 0.632282 | 2.4:+61142192 | MS.gene02854:CDS |
ATGGTGTTAAAACAAGGCAC+AGG | 0.633038 | 2.4:+61141621 | MS.gene02854:CDS |
CACTCCGGTTTCTGTCAATG+AGG | 0.633545 | 2.4:+61143017 | MS.gene02854:CDS |
GTCACCAATGATGACAAACA+TGG | 0.638429 | 2.4:-61141645 | None:intergenic |
ATCAATATTTATAAGCACCA+CGG | 0.641730 | 2.4:+61144344 | MS.gene02854:CDS |
ATGCGAGCACCTGAAAGTGA+AGG | 0.643010 | 2.4:-61146287 | None:intergenic |
TTGAGAATGGTGTTAAAACA+AGG | 0.644119 | 2.4:+61141615 | MS.gene02854:CDS |
TTTGCATACAAATTCAAACA+AGG | 0.646718 | 2.4:-61143727 | None:intergenic |
GATCAGGAAGTGTTGCACAA+TGG | 0.652566 | 2.4:+61143336 | MS.gene02854:CDS |
ATGTTTGTACACAATGGTGA+TGG | 0.656217 | 2.4:+61142698 | MS.gene02854:CDS |
TTACCTGAATTGTCTGTCCG+TGG | 0.657656 | 2.4:-61144361 | None:intergenic |
ACAATAGAGACGGTTGAGGG+AGG | 0.659463 | 2.4:+61142633 | MS.gene02854:CDS |
TGGTGACAAGTACTATGACC+AGG | 0.660528 | 2.4:+61141661 | MS.gene02854:CDS |
TTGAAGAAAACGTAAAACCA+AGG | 0.662051 | 2.4:+61148138 | MS.gene02854:CDS |
ACAGCAATAACACCATCAGA+TGG | 0.662972 | 2.4:-61150602 | None:intergenic |
CAATGTATAGGAATTTGATG+TGG | 0.663176 | 2.4:+61144280 | MS.gene02854:intron |
GCTGTGAAAGCCATTAGGAG+TGG | 0.672918 | 2.4:+61150620 | MS.gene02854:CDS |
GCAATCCAGAGTTTGAGCAG+TGG | 0.690063 | 2.4:+61146200 | MS.gene02854:CDS |
TTTATGCTATAGGACTCTGA+AGG | 0.690132 | 2.4:+61143241 | MS.gene02854:intron |
CCTAGCACGAACAATAGAGA+CGG | 0.692555 | 2.4:+61142623 | MS.gene02854:CDS |
CTACACACCCAAGTGCCATG+AGG | 0.695468 | 2.4:+61146321 | MS.gene02854:CDS |
TGGTCCTTACGAGTTTCGTG+TGG | 0.696733 | 2.4:+61149071 | MS.gene02854:CDS |
ATTTCGAACTGAATCACACA+CGG | 0.725164 | 2.4:+61142879 | MS.gene02854:CDS |
GCGTTCATTAAAGCGCCCAG+TGG | 0.730706 | 2.4:-61142905 | None:intergenic |
AGTTGATGGATCAAATCACG+GGG | 0.752220 | 2.4:+61148471 | MS.gene02854:CDS |
AAATCACACTCACTACATGG+AGG | 0.757919 | 2.4:-61145237 | None:intergenic |
TCGAACTGAATCACACACGG+AGG | 0.793288 | 2.4:+61142882 | MS.gene02854:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 61141578 | 61150739 | 61141578 | ID=MS.gene02854 |
chr2.4 | mRNA | 61141578 | 61150739 | 61141578 | ID=MS.gene02854.t1;Parent=MS.gene02854 |
chr2.4 | exon | 61141578 | 61141682 | 61141578 | ID=MS.gene02854.t1.exon1;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61141578 | 61141682 | 61141578 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61142134 | 61142213 | 61142134 | ID=MS.gene02854.t1.exon2;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61142134 | 61142213 | 61142134 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61142318 | 61142489 | 61142318 | ID=MS.gene02854.t1.exon3;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61142318 | 61142489 | 61142318 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61142597 | 61142719 | 61142597 | ID=MS.gene02854.t1.exon4;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61142597 | 61142719 | 61142597 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61142865 | 61143038 | 61142865 | ID=MS.gene02854.t1.exon5;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61142865 | 61143038 | 61142865 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61143253 | 61143363 | 61143253 | ID=MS.gene02854.t1.exon6;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61143253 | 61143363 | 61143253 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61143457 | 61143593 | 61143457 | ID=MS.gene02854.t1.exon7;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61143457 | 61143593 | 61143457 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61143680 | 61143773 | 61143680 | ID=MS.gene02854.t1.exon8;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61143680 | 61143773 | 61143680 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61144290 | 61144379 | 61144290 | ID=MS.gene02854.t1.exon9;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61144290 | 61144379 | 61144290 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61144513 | 61144649 | 61144513 | ID=MS.gene02854.t1.exon10;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61144513 | 61144649 | 61144513 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61144763 | 61144860 | 61144763 | ID=MS.gene02854.t1.exon11;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61144763 | 61144860 | 61144763 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61145031 | 61145148 | 61145031 | ID=MS.gene02854.t1.exon12;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61145031 | 61145148 | 61145031 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61145233 | 61145320 | 61145233 | ID=MS.gene02854.t1.exon13;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61145233 | 61145320 | 61145233 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61145413 | 61145512 | 61145413 | ID=MS.gene02854.t1.exon14;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61145413 | 61145512 | 61145413 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61145611 | 61145663 | 61145611 | ID=MS.gene02854.t1.exon15;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61145611 | 61145663 | 61145611 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61146167 | 61146343 | 61146167 | ID=MS.gene02854.t1.exon16;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61146167 | 61146343 | 61146167 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61146430 | 61146467 | 61146430 | ID=MS.gene02854.t1.exon17;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61146430 | 61146467 | 61146430 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61147341 | 61147431 | 61147341 | ID=MS.gene02854.t1.exon18;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61147341 | 61147431 | 61147341 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61148128 | 61148307 | 61148128 | ID=MS.gene02854.t1.exon19;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61148128 | 61148307 | 61148128 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61148409 | 61148517 | 61148409 | ID=MS.gene02854.t1.exon20;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61148409 | 61148517 | 61148409 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61148609 | 61148678 | 61148609 | ID=MS.gene02854.t1.exon21;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61148609 | 61148678 | 61148609 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61148957 | 61149092 | 61148957 | ID=MS.gene02854.t1.exon22;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61148957 | 61149092 | 61148957 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61149542 | 61149670 | 61149542 | ID=MS.gene02854.t1.exon23;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61149542 | 61149670 | 61149542 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61150011 | 61150136 | 61150011 | ID=MS.gene02854.t1.exon24;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61150011 | 61150136 | 61150011 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61150334 | 61150399 | 61150334 | ID=MS.gene02854.t1.exon25;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61150334 | 61150399 | 61150334 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
chr2.4 | exon | 61150524 | 61150739 | 61150524 | ID=MS.gene02854.t1.exon26;Parent=MS.gene02854.t1 |
chr2.4 | CDS | 61150524 | 61150739 | 61150524 | ID=cds.MS.gene02854.t1;Parent=MS.gene02854.t1 |
Gene Sequence |
Protein sequence |