Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01984.t1 | AES64635.2 | 96.2 | 984 | 37 | 0 | 1 | 984 | 1 | 984 | 0.00E+00 | 1862.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01984.t1 | Q9XIK4 | 67.6 | 1005 | 297 | 9 | 1 | 979 | 1 | 1002 | 0.0e+00 | 1297.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01984.t1 | G7ISQ3 | 96.2 | 984 | 37 | 0 | 1 | 984 | 1 | 984 | 0.0e+00 | 1862.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01984.t1 | MTR_2g028030 | 95.821 | 1005 | 41 | 1 | 1 | 1004 | 1 | 1005 | 0.0 | 1987 |
MS.gene01984.t1 | MTR_8g092060 | 75.484 | 1032 | 223 | 9 | 1 | 1005 | 1 | 1029 | 0.0 | 1550 |
MS.gene01984.t1 | MTR_2g449880 | 76.190 | 42 | 10 | 0 | 634 | 675 | 32 | 73 | 1.56e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01984.t1 | AT1G10490 | 66.731 | 1031 | 314 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1333 |
MS.gene01984.t1 | AT1G10490 | 66.731 | 1031 | 314 | 9 | 1 | 1005 | 1 | 1028 | 0.0 | 1333 |
MS.gene01984.t1 | AT3G57940 | 68.632 | 950 | 285 | 5 | 1 | 938 | 1 | 949 | 0.0 | 1296 |
MS.gene01984.t1 | AT3G57940 | 68.316 | 950 | 283 | 6 | 1 | 938 | 1 | 944 | 0.0 | 1283 |
Find 184 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCATCAAGTTGTTCTTTA+AGG | 0.094886 | 2.2:-59485697 | None:intergenic |
TGATTCTTTCAGTAGCTTTA+TGG | 0.119567 | 2.2:-59486728 | None:intergenic |
CTTGGTGGAGCCTGTATTTC+AGG | 0.125854 | 2.2:-59489792 | None:intergenic |
ATTGAGGAAGAGGGGTTTAT+TGG | 0.178337 | 2.2:+59484754 | MS.gene01984:CDS |
CATTACATTGGTGTCTCATT+TGG | 0.200504 | 2.2:+59490620 | MS.gene01984:CDS |
AAAAGCTGTTGTCACATTTA+TGG | 0.211036 | 2.2:+59485862 | MS.gene01984:CDS |
AAAATTCTGGGTAGTACTTT+TGG | 0.212769 | 2.2:+59484854 | MS.gene01984:CDS |
AATAACTCGTTGTTTGTATA+AGG | 0.235420 | 2.2:+59484823 | MS.gene01984:CDS |
GAAGACAGGAAGACTAAATA+TGG | 0.250031 | 2.2:-59487018 | None:intergenic |
TTCCTGTCTTCTACTGTTAA+TGG | 0.250402 | 2.2:+59487030 | MS.gene01984:CDS |
CTTTAATTTCAGCTTGGTTA+TGG | 0.254393 | 2.2:+59488821 | MS.gene01984:intron |
GTTGTTCTTTAAGGTTCTTC+AGG | 0.268516 | 2.2:-59485688 | None:intergenic |
GGAACCTCTTAGTGTATCTT+TGG | 0.274563 | 2.2:+59492747 | MS.gene01984:CDS |
GAATGTTGATTCGATCTTCT+TGG | 0.294677 | 2.2:-59492504 | None:intergenic |
ATGTTCAAACCTTGGTAAAA+TGG | 0.303520 | 2.2:-59490910 | None:intergenic |
TAAGGATTCAGACAAAATTC+TGG | 0.306572 | 2.2:+59484841 | MS.gene01984:CDS |
ACATCAGAGGGCACTGATTC+TGG | 0.315070 | 2.2:+59487242 | MS.gene01984:CDS |
GCTCTTGGTTTATCTATTGC+TGG | 0.316573 | 2.2:+59485959 | MS.gene01984:CDS |
ATTACATTGGTGTCTCATTT+GGG | 0.317586 | 2.2:+59490621 | MS.gene01984:CDS |
ATTCAGTTCGAAATCTTTCA+TGG | 0.322534 | 2.2:-59485273 | None:intergenic |
TCCTGTCTTCTACTGTTAAT+GGG | 0.330482 | 2.2:+59487031 | MS.gene01984:CDS |
AGAAATAACCTGCTAAGATT+AGG | 0.335625 | 2.2:-59487538 | None:intergenic |
CCAATGTAATGAAGCTTCTC+TGG | 0.343452 | 2.2:-59490608 | None:intergenic |
GTAATGTGATGCAACATATA+AGG | 0.350439 | 2.2:-59487826 | None:intergenic |
GACATCAGCTGTAGATCATT+TGG | 0.350952 | 2.2:-59487858 | None:intergenic |
AAGTTTCACTCCACTCCTAA+TGG | 0.353131 | 2.2:-59493035 | None:intergenic |
CTGGCGATCCCATTGAAAAC+TGG | 0.354899 | 2.2:+59487476 | MS.gene01984:CDS |
AAGTGCTGTTGTTGCCTTGT+TGG | 0.361862 | 2.2:+59485910 | MS.gene01984:CDS |
CACCACTTATTTGTACTACT+TGG | 0.363582 | 2.2:+59487894 | MS.gene01984:CDS |
TGATTCTTTGATTCATCAAC+AGG | 0.363807 | 2.2:-59488016 | None:intergenic |
TTGCATTGGTCTGCAAAATC+AGG | 0.367543 | 2.2:+59492036 | MS.gene01984:CDS |
CTTGAAAATACAAATGAGTA+AGG | 0.369749 | 2.2:-59491967 | None:intergenic |
ATCTTCCACGTTTCGTGGCA+TGG | 0.386368 | 2.2:+59491042 | MS.gene01984:CDS |
TTGCTGGAGCCGTTGCTGTT+GGG | 0.386520 | 2.2:+59485975 | MS.gene01984:CDS |
CGACTAAAGGCTTATGTTGA+TGG | 0.386670 | 2.2:+59491456 | MS.gene01984:CDS |
CTTCTATCTTCCACGTTTCG+TGG | 0.394509 | 2.2:+59491037 | MS.gene01984:CDS |
TACCTATTTCATCTCACATA+AGG | 0.396827 | 2.2:+59485392 | MS.gene01984:CDS |
TAGAAAACTTAACTGGAATC+TGG | 0.397069 | 2.2:-59490703 | None:intergenic |
GTGAAGGAAAATTTGTGTCT+TGG | 0.397805 | 2.2:-59488674 | None:intergenic |
TACATACAGGTTTGTCTTGA+GGG | 0.398420 | 2.2:+59488561 | MS.gene01984:intron |
GCTCTCGCAAGTTGAATTGT+TGG | 0.401328 | 2.2:+59486942 | MS.gene01984:CDS |
AATGATGAAATTGAAGTTGA+TGG | 0.405431 | 2.2:+59490862 | MS.gene01984:CDS |
TGGATGACGCACAAAATATC+AGG | 0.406769 | 2.2:-59488043 | None:intergenic |
GAAATAACCTGCTAAGATTA+GGG | 0.409631 | 2.2:-59487537 | None:intergenic |
TCTGCAGCTTCTGTAACTCT+TGG | 0.415583 | 2.2:-59489810 | None:intergenic |
TTGCAAGGCATGTGTGTTCA+TGG | 0.416518 | 2.2:+59485351 | MS.gene01984:CDS |
TTTAATTCAATAGGGACAAA+TGG | 0.416536 | 2.2:+59492403 | MS.gene01984:intron |
GACCTTATGTGAGATGAAAT+AGG | 0.418137 | 2.2:-59485394 | None:intergenic |
CGAGGGAAATCAGCTGCTCT+TGG | 0.418892 | 2.2:+59485944 | MS.gene01984:CDS |
TTGTTGGCTGCTCGTGGCCG+AGG | 0.420581 | 2.2:+59485926 | MS.gene01984:CDS |
ATTGTTCGTGCTAGGAGATT+AGG | 0.422097 | 2.2:-59485018 | None:intergenic |
AGCAGTGGTCGTCAACCATT+TGG | 0.423050 | 2.2:+59488618 | MS.gene01984:CDS |
GTGATTTATACTATGTCAAT+CGG | 0.424115 | 2.2:+59487656 | MS.gene01984:CDS |
GACGACCACTGCTCAAACTC+TGG | 0.424946 | 2.2:-59488608 | None:intergenic |
TCAATATCCATCTCAGAGAT+AGG | 0.427542 | 2.2:-59489768 | None:intergenic |
AGGTCCATGTTTGTCATCAT+TGG | 0.430880 | 2.2:+59484043 | MS.gene01984:CDS |
GACGGTTGAGGGAGGAGGTC+TGG | 0.430882 | 2.2:+59485044 | MS.gene01984:CDS |
GAATCCATCAGATATGCTTC+TGG | 0.434652 | 2.2:+59487457 | MS.gene01984:CDS |
GAATCACACACGGAGGCCAC+TGG | 0.437897 | 2.2:+59485292 | MS.gene01984:CDS |
GCACCACAGACAGACAATTC+AGG | 0.439083 | 2.2:+59486761 | MS.gene01984:CDS |
TTATTGCTGTGAAAGCCATT+AGG | 0.453352 | 2.2:+59493020 | MS.gene01984:CDS |
AGTACCTCATTGACAGAAAC+CGG | 0.455246 | 2.2:-59485424 | None:intergenic |
ATCAGTGCCCTCTGATGTCT+TGG | 0.457793 | 2.2:-59487237 | None:intergenic |
CATGGAATTTGATCGCCAAA+TGG | 0.460355 | 2.2:-59488633 | None:intergenic |
GCTTCTGTGTTACTTTGCAT+TGG | 0.464108 | 2.2:+59492022 | MS.gene01984:CDS |
GCAGCTTCTGTAACTCTTGG+TGG | 0.467911 | 2.2:-59489807 | None:intergenic |
CCTGTAGTGAAGTCTTTGCT+TGG | 0.468559 | 2.2:+59486994 | MS.gene01984:CDS |
TGTAAAACAGACTCAAAGTC+AGG | 0.473602 | 2.2:-59492965 | None:intergenic |
AAAATACAAATGAGTAAGGA+TGG | 0.474098 | 2.2:-59491963 | None:intergenic |
GACTGGATTTGATCTGTGCC+TGG | 0.476341 | 2.2:-59484563 | None:intergenic |
GGATATTGAACCTGAAATAC+AGG | 0.477216 | 2.2:+59489782 | MS.gene01984:CDS |
TTTATCTGCACTTGACTACA+AGG | 0.477413 | 2.2:+59486155 | MS.gene01984:CDS |
GAAGTGTTGCACAATGGATC+AGG | 0.478725 | 2.2:+59485745 | MS.gene01984:CDS |
TTACATACAGGTTTGTCTTG+AGG | 0.480191 | 2.2:+59488560 | MS.gene01984:intron |
TACATGTTGGACCATTGATC+AGG | 0.480671 | 2.2:+59485723 | MS.gene01984:CDS |
GAAATTACCCTCATGGCACT+TGG | 0.481815 | 2.2:-59488732 | None:intergenic |
ATTGCTGGAGCCGTTGCTGT+TGG | 0.482794 | 2.2:+59485974 | MS.gene01984:CDS |
AATTGCTCACAGAATTTCCA+TGG | 0.484074 | 2.2:-59488651 | None:intergenic |
CACAAATGGATCAGCTCTAT+CGG | 0.484503 | 2.2:-59484780 | None:intergenic |
AAGGATTCAGACAAAATTCT+GGG | 0.485701 | 2.2:+59484842 | MS.gene01984:CDS |
TTTACACTGGACAGTTATGA+AGG | 0.489444 | 2.2:+59487152 | MS.gene01984:intron |
AAATTTAAGCTTCCTCCAAA+AGG | 0.493708 | 2.2:-59490663 | None:intergenic |
TATCTTTGTGATAAGAAAAG+AGG | 0.495526 | 2.2:-59487684 | None:intergenic |
GGGGCAGATATCTTGTCATT+CGG | 0.497781 | 2.2:+59488581 | MS.gene01984:CDS |
TGTAAAGCTGACAATTCAAC+CGG | 0.500346 | 2.2:-59491998 | None:intergenic |
CTTGATGAAACTTTACATGT+TGG | 0.500629 | 2.2:+59485710 | MS.gene01984:CDS |
TGATAATTTATCCAGGATCA+TGG | 0.501330 | 2.2:+59491347 | MS.gene01984:intron |
AGTACAAATAAGTGGTGTGC+TGG | 0.505222 | 2.2:-59487888 | None:intergenic |
GACTGGTGAGCATTCATGTA+TGG | 0.506125 | 2.2:+59490822 | MS.gene01984:CDS |
CTTGTTTAGCTGCATTATTG+AGG | 0.507282 | 2.2:-59492777 | None:intergenic |
CGCAAATTTACAAGCAGATG+AGG | 0.513157 | 2.2:-59490575 | None:intergenic |
TTGTTTGAATTTGTATGCAA+AGG | 0.513684 | 2.2:+59486132 | MS.gene01984:CDS |
GTGCAACACTTCCTGATCAA+TGG | 0.516478 | 2.2:-59485734 | None:intergenic |
TCAGGACATTTCGTACATTG+AGG | 0.519644 | 2.2:+59492054 | MS.gene01984:CDS |
CTGGACAGTTATGAAGGTAC+TGG | 0.524083 | 2.2:+59487158 | MS.gene01984:intron |
CATTTGGCGATCAAATTCCA+TGG | 0.524670 | 2.2:+59488634 | MS.gene01984:CDS |
GAGTGGAGTGAAACTTCAAA+AGG | 0.526023 | 2.2:+59493042 | MS.gene01984:CDS |
ACACCATAAAACAGTAGGAC+TGG | 0.528915 | 2.2:-59484580 | None:intergenic |
AAGTTCTACAAACATCTAGA+TGG | 0.529281 | 2.2:+59492473 | MS.gene01984:CDS |
AGTTACAGAAGCTGCAGAGA+AGG | 0.530578 | 2.2:+59489815 | MS.gene01984:CDS |
ATGCCATCCCTAATCTTAGC+AGG | 0.531640 | 2.2:+59487530 | MS.gene01984:CDS |
AAGTTGATGGATCAAATCAC+GGG | 0.532334 | 2.2:+59490875 | MS.gene01984:CDS |
ATTATCACTCGCTTCTTGCA+AGG | 0.534075 | 2.2:+59485336 | MS.gene01984:CDS |
GGATGATATGAAGTTAAAAG+AGG | 0.535288 | 2.2:+59492928 | MS.gene01984:intron |
TCTTCATTACATGCTTAGCC+AGG | 0.537572 | 2.2:+59484545 | MS.gene01984:CDS |
GTTGCCTTGTTGGCTGCTCG+TGG | 0.538068 | 2.2:+59485920 | MS.gene01984:CDS |
GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 2.2:-59490689 | None:intergenic |
ATCAGAACTCTCATTGAGAA+TGG | 0.540090 | 2.2:+59484004 | MS.gene01984:CDS |
TGATTTATACTATGTCAATC+GGG | 0.541521 | 2.2:+59487657 | MS.gene01984:CDS |
TACCAAGTAGTACAAATAAG+TGG | 0.541889 | 2.2:-59487896 | None:intergenic |
CCAAGCAAAGACTTCACTAC+AGG | 0.542464 | 2.2:-59486994 | None:intergenic |
AGATGAGGAAGATCTGTCCT+TGG | 0.543526 | 2.2:-59490560 | None:intergenic |
GCAGAGTGACATGAGGAAGA+AGG | 0.548876 | 2.2:+59483970 | None:intergenic |
TGTTGGCTGCTCGTGGCCGA+GGG | 0.550071 | 2.2:+59485927 | MS.gene01984:CDS |
ATAGAGACGGTTGAGGGAGG+AGG | 0.552978 | 2.2:+59485039 | MS.gene01984:CDS |
TGTCTCATTTGGGCTAACGC+TGG | 0.553244 | 2.2:+59490631 | MS.gene01984:CDS |
ATATGATATGAAGCGACTAA+AGG | 0.556805 | 2.2:+59491443 | MS.gene01984:CDS |
TCAATTTCATCATTGTCAAG+AGG | 0.557706 | 2.2:-59490853 | None:intergenic |
ACCCATTAACAGTAGAAGAC+AGG | 0.559079 | 2.2:-59487032 | None:intergenic |
TATAAATCACACTCACTACA+TGG | 0.560842 | 2.2:-59487643 | None:intergenic |
AAGACAGGAAGACTAAATAT+GGG | 0.562279 | 2.2:-59487017 | None:intergenic |
GCTGTCTACAGTTACTATGA+AGG | 0.566578 | 2.2:+59489735 | MS.gene01984:intron |
ATTGACAGAAACCGGAGTGA+TGG | 0.567213 | 2.2:-59485416 | None:intergenic |
ACTTACTCCTATCTCTGAGA+TGG | 0.568913 | 2.2:+59489761 | MS.gene01984:CDS |
AATCACACACGGAGGCCACT+GGG | 0.572127 | 2.2:+59485293 | MS.gene01984:CDS |
GAAGTTGATGGATCAAATCA+CGG | 0.573925 | 2.2:+59490874 | MS.gene01984:CDS |
TGGATTACAAGCTTGCTATG+AGG | 0.574233 | 2.2:+59491062 | MS.gene01984:CDS |
CCAGAGAAGCTTCATTACAT+TGG | 0.575108 | 2.2:+59490608 | MS.gene01984:CDS |
CAATGTAATGAAGCTTCTCT+GGG | 0.575197 | 2.2:-59490607 | None:intergenic |
ATCGCCAGAAGCATATCTGA+TGG | 0.576905 | 2.2:-59487461 | None:intergenic |
TCGGCCACGAGCAGCCAACA+AGG | 0.578090 | 2.2:-59485924 | None:intergenic |
TAATGCAGCTAAACAAGTTG+AGG | 0.579381 | 2.2:+59492783 | MS.gene01984:CDS |
TCACATAAGGTCCATCACTC+CGG | 0.580462 | 2.2:+59485405 | MS.gene01984:CDS |
AAATTACCCTCATGGCACTT+GGG | 0.582738 | 2.2:-59488731 | None:intergenic |
CAAGAGCAGCTGATTTCCCT+CGG | 0.585819 | 2.2:-59485943 | None:intergenic |
TTACCTGAATTGTCTGTCTG+TGG | 0.586384 | 2.2:-59486764 | None:intergenic |
GTGGACTCCCTAGACTGTCA+TGG | 0.586723 | 2.2:+59492726 | MS.gene01984:intron |
GGGACAAATGGAGCTGAAAG+AGG | 0.588341 | 2.2:+59492415 | MS.gene01984:intron |
AAAGACTTCACTACAGGCAG+TGG | 0.593286 | 2.2:-59486988 | None:intergenic |
ATCTTTGTGATAAGAAAAGA+GGG | 0.593501 | 2.2:-59487683 | None:intergenic |
ACGAACAATAGAGACGGTTG+AGG | 0.595470 | 2.2:+59485032 | MS.gene01984:CDS |
TCATCCAAAGATACACTAAG+AGG | 0.596200 | 2.2:-59492751 | None:intergenic |
CCGTCTCTATTGTTCGTGCT+AGG | 0.600815 | 2.2:-59485026 | None:intergenic |
ACTTGACAGAATACTGTGAC+TGG | 0.603222 | 2.2:+59490805 | MS.gene01984:intron |
TAACCTGCTAAGATTAGGGA+TGG | 0.603288 | 2.2:-59487533 | None:intergenic |
GGCATATTACCCAACAGCAA+CGG | 0.605207 | 2.2:-59485984 | None:intergenic |
TTCAGTAGCTTTATGGAACG+CGG | 0.608593 | 2.2:-59486721 | None:intergenic |
GTAATCCATGCCACGAAACG+TGG | 0.610532 | 2.2:-59491047 | None:intergenic |
GATTCTGCCAAGACATCAGA+GGG | 0.612667 | 2.2:+59487230 | MS.gene01984:CDS |
GAGTGACATGAGGAAGAAGG+TGG | 0.613554 | 2.2:+59483973 | None:intergenic |
CTCACCACACGAAACTCGTA+AGG | 0.614225 | 2.2:-59491480 | None:intergenic |
CGAACAATAGAGACGGTTGA+GGG | 0.620193 | 2.2:+59485033 | MS.gene01984:CDS |
TACACACCCAAGTGCCATGA+GGG | 0.621730 | 2.2:+59488725 | MS.gene01984:CDS |
TCAGTAGCTTTATGGAACGC+GGG | 0.622619 | 2.2:-59486720 | None:intergenic |
TGATTCTGCCAAGACATCAG+AGG | 0.622894 | 2.2:+59487229 | MS.gene01984:CDS |
AAATACAAATGAGTAAGGAT+GGG | 0.623146 | 2.2:-59491962 | None:intergenic |
TTGTAACACCATAAAACAGT+AGG | 0.624455 | 2.2:-59484585 | None:intergenic |
GCTTACATGTTTGTACACAA+TGG | 0.626330 | 2.2:+59485095 | MS.gene01984:CDS |
ACATACAGGTTTGTCTTGAG+GGG | 0.631624 | 2.2:+59488562 | MS.gene01984:intron |
TATGGTGTTACAAGGACAAG+CGG | 0.632282 | 2.2:+59484595 | MS.gene01984:CDS |
ATGGTGTTAAAACAAGGCAC+AGG | 0.633038 | 2.2:+59484023 | MS.gene01984:CDS |
CACTCCGGTTTCTGTCAATG+AGG | 0.633545 | 2.2:+59485420 | MS.gene01984:CDS |
GTCACCAATGATGACAAACA+TGG | 0.638429 | 2.2:-59484047 | None:intergenic |
ATGCGAGCACCTGAAAGTGA+AGG | 0.643010 | 2.2:-59488690 | None:intergenic |
TTGAGAATGGTGTTAAAACA+AGG | 0.644119 | 2.2:+59484017 | MS.gene01984:CDS |
TTTGCATACAAATTCAAACA+AGG | 0.646718 | 2.2:-59486130 | None:intergenic |
GATCAGGAAGTGTTGCACAA+TGG | 0.652566 | 2.2:+59485739 | MS.gene01984:CDS |
ATGTTTGTACACAATGGTGA+TGG | 0.656217 | 2.2:+59485101 | MS.gene01984:CDS |
ACAATAGAGACGGTTGAGGG+AGG | 0.659463 | 2.2:+59485036 | MS.gene01984:CDS |
TGGTGACAAGTACTATGACC+AGG | 0.660528 | 2.2:+59484063 | MS.gene01984:CDS |
TTGAAGAAAACGTAAAACCA+AGG | 0.662051 | 2.2:+59490543 | MS.gene01984:CDS |
ACAGCAATAACACCATCAGA+TGG | 0.662972 | 2.2:-59493007 | None:intergenic |
CAATGTATAGGAATTTGATG+TGG | 0.663176 | 2.2:+59486683 | MS.gene01984:intron |
GCTGTGAAAGCCATTAGGAG+TGG | 0.672918 | 2.2:+59493025 | MS.gene01984:CDS |
GCAATCCAGAGTTTGAGCAG+TGG | 0.690063 | 2.2:+59488603 | MS.gene01984:CDS |
TTTATGCTATAGGACTCTGA+AGG | 0.690132 | 2.2:+59485644 | MS.gene01984:intron |
CCTAGCACGAACAATAGAGA+CGG | 0.692555 | 2.2:+59485026 | MS.gene01984:CDS |
CTACACACCCAAGTGCCATG+AGG | 0.695468 | 2.2:+59488724 | MS.gene01984:CDS |
TGGTCCTTACGAGTTTCGTG+TGG | 0.696733 | 2.2:+59491476 | MS.gene01984:CDS |
ATTTCGAACTGAATCACACA+CGG | 0.725164 | 2.2:+59485282 | MS.gene01984:CDS |
GCGTTCATTAAAGCGCCCAG+TGG | 0.730706 | 2.2:-59485308 | None:intergenic |
AGTTGATGGATCAAATCACG+GGG | 0.752220 | 2.2:+59490876 | MS.gene01984:CDS |
AAATCACACTCACTACATGG+AGG | 0.757919 | 2.2:-59487640 | None:intergenic |
TCGAACTGAATCACACACGG+AGG | 0.793288 | 2.2:+59485285 | MS.gene01984:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 59483980 | 59493144 | 59483980 | ID=MS.gene01984 |
chr2.2 | mRNA | 59483980 | 59493144 | 59483980 | ID=MS.gene01984.t1;Parent=MS.gene01984 |
chr2.2 | exon | 59483980 | 59484084 | 59483980 | ID=MS.gene01984.t1.exon1;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59483980 | 59484084 | 59483980 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59484537 | 59484616 | 59484537 | ID=MS.gene01984.t1.exon2;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59484537 | 59484616 | 59484537 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59484721 | 59484892 | 59484721 | ID=MS.gene01984.t1.exon3;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59484721 | 59484892 | 59484721 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59485000 | 59485122 | 59485000 | ID=MS.gene01984.t1.exon4;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59485000 | 59485122 | 59485000 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59485268 | 59485441 | 59485268 | ID=MS.gene01984.t1.exon5;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59485268 | 59485441 | 59485268 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59485656 | 59485766 | 59485656 | ID=MS.gene01984.t1.exon6;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59485656 | 59485766 | 59485656 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59485860 | 59485996 | 59485860 | ID=MS.gene01984.t1.exon7;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59485860 | 59485996 | 59485860 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59486083 | 59486176 | 59486083 | ID=MS.gene01984.t1.exon8;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59486083 | 59486176 | 59486083 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59486693 | 59486782 | 59486693 | ID=MS.gene01984.t1.exon9;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59486693 | 59486782 | 59486693 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59486916 | 59487052 | 59486916 | ID=MS.gene01984.t1.exon10;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59486916 | 59487052 | 59486916 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59487166 | 59487263 | 59487166 | ID=MS.gene01984.t1.exon11;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59487166 | 59487263 | 59487166 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59487434 | 59487551 | 59487434 | ID=MS.gene01984.t1.exon12;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59487434 | 59487551 | 59487434 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59487636 | 59487723 | 59487636 | ID=MS.gene01984.t1.exon13;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59487636 | 59487723 | 59487636 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59487816 | 59487915 | 59487816 | ID=MS.gene01984.t1.exon14;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59487816 | 59487915 | 59487816 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59488014 | 59488066 | 59488014 | ID=MS.gene01984.t1.exon15;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59488014 | 59488066 | 59488014 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59488570 | 59488746 | 59488570 | ID=MS.gene01984.t1.exon16;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59488570 | 59488746 | 59488570 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59488833 | 59488870 | 59488833 | ID=MS.gene01984.t1.exon17;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59488833 | 59488870 | 59488833 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59489746 | 59489836 | 59489746 | ID=MS.gene01984.t1.exon18;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59489746 | 59489836 | 59489746 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59490533 | 59490712 | 59490533 | ID=MS.gene01984.t1.exon19;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59490533 | 59490712 | 59490533 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59490814 | 59490922 | 59490814 | ID=MS.gene01984.t1.exon20;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59490814 | 59490922 | 59490814 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59491014 | 59491083 | 59491014 | ID=MS.gene01984.t1.exon21;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59491014 | 59491083 | 59491014 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59491362 | 59491497 | 59491362 | ID=MS.gene01984.t1.exon22;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59491362 | 59491497 | 59491362 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59491947 | 59492075 | 59491947 | ID=MS.gene01984.t1.exon23;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59491947 | 59492075 | 59491947 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59492416 | 59492541 | 59492416 | ID=MS.gene01984.t1.exon24;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59492416 | 59492541 | 59492416 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59492739 | 59492804 | 59492739 | ID=MS.gene01984.t1.exon25;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59492739 | 59492804 | 59492739 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
chr2.2 | exon | 59492929 | 59493144 | 59492929 | ID=MS.gene01984.t1.exon26;Parent=MS.gene01984.t1 |
chr2.2 | CDS | 59492929 | 59493144 | 59492929 | ID=cds.MS.gene01984.t1;Parent=MS.gene01984.t1 |
Gene Sequence |
Protein sequence |