Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58159.t1 | XP_003630123.2 | 98.9 | 1010 | 11 | 0 | 1 | 1010 | 1 | 1010 | 0.00E+00 | 1975.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58159.t1 | Q9XIK4 | 71.8 | 1018 | 276 | 6 | 1 | 1012 | 1 | 1013 | 0.0e+00 | 1434.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58159.t1 | G7LBB9 | 98.9 | 1010 | 11 | 0 | 1 | 1010 | 1 | 1010 | 0.0e+00 | 1975.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58159.t1 | MTR_8g092060 | 98.931 | 1029 | 11 | 0 | 1 | 1029 | 1 | 1029 | 0.0 | 2110 |
MS.gene58159.t1 | MTR_2g028030 | 74.951 | 1030 | 229 | 9 | 1 | 1026 | 1 | 1005 | 0.0 | 1550 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58159.t1 | AT1G10490 | 71.512 | 1032 | 283 | 6 | 1 | 1026 | 1 | 1027 | 0.0 | 1466 |
MS.gene58159.t1 | AT1G10490 | 71.512 | 1032 | 283 | 6 | 1 | 1026 | 1 | 1027 | 0.0 | 1466 |
MS.gene58159.t1 | AT3G57940 | 70.059 | 1012 | 288 | 6 | 1 | 1008 | 1 | 1001 | 0.0 | 1407 |
MS.gene58159.t1 | AT3G57940 | 69.763 | 1012 | 286 | 7 | 1 | 1008 | 1 | 996 | 0.0 | 1392 |
Find 217 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTTCCTTGATGCAATTT+TGG | 0.109454 | 4.2:+10099377 | MS.gene58159:CDS |
TGGTATAACCTGCTAATATT+AGG | 0.153603 | 4.2:-10101821 | None:intergenic |
AATGACGACTCAGGGTATTT+TGG | 0.176511 | 4.2:+10097492 | MS.gene58159:CDS |
GCTTTCGCAAGTTGAATTAT+TGG | 0.181367 | 4.2:+10100762 | MS.gene58159:CDS |
TTCCTGTCTTCCACTGTTAA+TGG | 0.209425 | 4.2:+10100850 | MS.gene58159:CDS |
CATCATTATTCAAGGGTTTC+AGG | 0.210462 | 4.2:-10105595 | None:intergenic |
CCTTACAACAGTAGCATTCT+TGG | 0.213127 | 4.2:-10100538 | None:intergenic |
GTCTTTGCTTGGCCCATATC+TGG | 0.233387 | 4.2:+10100825 | MS.gene58159:CDS |
ATGAACCCACCCTGGTAAAA+TGG | 0.256257 | 4.2:-10105659 | None:intergenic |
CCGTGGACCTCTTTCGCTTT+TGG | 0.262875 | 4.2:+10105410 | MS.gene58159:CDS |
AATATTGTCTCTATTTATAA+AGG | 0.271442 | 4.2:+10107371 | MS.gene58159:CDS |
CGATCCATGTTTGTCATTAT+CGG | 0.274182 | 4.2:+10096942 | MS.gene58159:CDS |
AAGCATTCTGAAAGAGTTCT+TGG | 0.279878 | 4.2:+10097580 | MS.gene58159:CDS |
GCAAAGATTTGCTAAACTTC+TGG | 0.287441 | 4.2:+10105768 | MS.gene58159:CDS |
GGTATAACCTGCTAATATTA+GGG | 0.307074 | 4.2:-10101820 | None:intergenic |
CTTCGGGATGTGTGTTCTTC+AGG | 0.309009 | 4.2:+10097609 | MS.gene58159:CDS |
CATGACCACGCATGCCTTAC+AGG | 0.309529 | 4.2:-10098094 | None:intergenic |
ATCAGAACTCTCATCGAAAA+TGG | 0.319607 | 4.2:+10096903 | MS.gene58159:CDS |
CAGCCATAAATCAAGTAAAA+AGG | 0.320830 | 4.2:+10108089 | MS.gene58159:CDS |
GACCTTATGTGAGATGAAAT+TGG | 0.324806 | 4.2:-10098138 | None:intergenic |
GCATACCGCTGGAGCAATTC+AGG | 0.326482 | 4.2:-10107907 | None:intergenic |
TTGTCAGCAGTTGTCTTGAT+AGG | 0.327701 | 4.2:-10106159 | None:intergenic |
CAAATGAGGAAGATCTGTTC+TGG | 0.328217 | 4.2:-10105323 | None:intergenic |
GGGACTATCAGAAGCTTATC+AGG | 0.328308 | 4.2:+10099156 | MS.gene58159:CDS |
TTCTGTTTAACAGGGACAAA+TGG | 0.330082 | 4.2:+10107332 | MS.gene58159:intron |
TCCTGTCTTCCACTGTTAAT+GGG | 0.334912 | 4.2:+10100851 | MS.gene58159:CDS |
GCTCTTGGTTTATCAATTGC+TGG | 0.336205 | 4.2:+10099459 | MS.gene58159:CDS |
TTGTTCGCTGCTCGTGGCCG+TGG | 0.342740 | 4.2:+10099426 | MS.gene58159:CDS |
CACCACTTATTTGTGCTACT+TGG | 0.343869 | 4.2:+10102178 | MS.gene58159:CDS |
ATAGTTCTTGCTAGTAGATT+AGG | 0.345177 | 4.2:-10097749 | None:intergenic |
GAGTTCTTGGCAACACCTTC+GGG | 0.345741 | 4.2:+10097593 | MS.gene58159:CDS |
AAACTTAAAGAGGAACTAAA+TGG | 0.347516 | 4.2:+10099187 | MS.gene58159:CDS |
GCCATCAATTGCAGATCATT+TGG | 0.348357 | 4.2:-10102142 | None:intergenic |
GACAATGCCTTGCAAAATAC+TGG | 0.353277 | 4.2:+10107955 | MS.gene58159:CDS |
CCGTGCTCTTAGCAGACATT+TGG | 0.355236 | 4.2:-10101117 | None:intergenic |
CATTATCTCGGCGTCTCCTT+TGG | 0.356220 | 4.2:+10105382 | MS.gene58159:CDS |
TTCCGTATCAGTGGTCCAAC+AGG | 0.357971 | 4.2:-10099217 | None:intergenic |
TATTCACAGGTTTGCCTTGA+GGG | 0.360429 | 4.2:+10102523 | MS.gene58159:intron |
GAAGACAGGAAGACCAGATA+TGG | 0.361242 | 4.2:-10100838 | None:intergenic |
GATGACCATGGCTCAAACTT+TGG | 0.365532 | 4.2:-10102570 | None:intergenic |
AGAGTTCTTGGCAACACCTT+CGG | 0.367420 | 4.2:+10097592 | MS.gene58159:CDS |
GGCTTCCACTTTCCGTGGCA+TGG | 0.373750 | 4.2:+10105789 | MS.gene58159:CDS |
GCGTTAAGCCAGCTTTCAAT+AGG | 0.380422 | 4.2:-10101767 | None:intergenic |
TCCAAATGATCTGCAATTGA+TGG | 0.389508 | 4.2:+10102141 | MS.gene58159:CDS |
AATAAAGCTTAACTGGAATC+TGG | 0.390038 | 4.2:-10105465 | None:intergenic |
AACAAGGATACCTCTTCAAC+AGG | 0.390312 | 4.2:-10098174 | None:intergenic |
CCGAGATAATGGAGCTTCTC+CGG | 0.393175 | 4.2:-10105370 | None:intergenic |
TTCAATTTCATCATTATTCA+AGG | 0.394125 | 4.2:-10105603 | None:intergenic |
TATAGATCACACTCACTTGC+TGG | 0.394267 | 4.2:-10101927 | None:intergenic |
TCTACATGGTCTTGCATTCA+AGG | 0.399145 | 4.2:+10107416 | MS.gene58159:CDS |
CAATCTTGCTGACTTTCATC+TGG | 0.401834 | 4.2:+10106248 | MS.gene58159:CDS |
CAAAGGAGACGCCGAGATAA+TGG | 0.404698 | 4.2:-10105381 | None:intergenic |
CGTGGGAAATCAGCTGCTCT+TGG | 0.405723 | 4.2:+10099444 | MS.gene58159:CDS |
TCTGTTTAACAGGGACAAAT+GGG | 0.420355 | 4.2:+10107333 | MS.gene58159:intron |
GTGATCTATACTATGTCAAT+CGG | 0.421633 | 4.2:+10101940 | MS.gene58159:CDS |
CTGCACAGGTCTGCAGAATC+AGG | 0.422621 | 4.2:+10106914 | MS.gene58159:CDS |
TGGATGACACACAAAATATC+AGG | 0.423019 | 4.2:-10102312 | None:intergenic |
TGAGCATGTGATAATGTAAC+TGG | 0.428130 | 4.2:-10106876 | None:intergenic |
TACCAATTTCATCTCACATA+AGG | 0.428327 | 4.2:+10098136 | MS.gene58159:CDS |
GATACCTCTTCAACAGGAAC+TGG | 0.435352 | 4.2:-10098168 | None:intergenic |
TCGAAAATGGCGTCAAATCA+AGG | 0.436134 | 4.2:+10096916 | MS.gene58159:CDS |
GCATCACAGACAGACCATTC+AGG | 0.441433 | 4.2:+10100575 | MS.gene58159:CDS |
GAATCCCACTCTCAGGCTAC+AGG | 0.446778 | 4.2:+10098036 | MS.gene58159:CDS |
CGGTGACAAATCCCGTGATC+AGG | 0.453225 | 4.2:+10096962 | MS.gene58159:CDS |
CATCACCATCGTGTACAAAC+TGG | 0.454198 | 4.2:-10097831 | None:intergenic |
GTTGATGAAACAAATCAGTT+CGG | 0.459835 | 4.2:+10105626 | MS.gene58159:CDS |
GAAAATGCATCGGCTTTCTC+AGG | 0.464462 | 4.2:-10097517 | None:intergenic |
AAATTTGCTCCTTTCTACAT+TGG | 0.466347 | 4.2:+10105442 | MS.gene58159:CDS |
GCTTCTTCCAAAAGCGAAAG+AGG | 0.467655 | 4.2:-10105417 | None:intergenic |
CAGCGGTATGCCTTTGAAGA+TGG | 0.471481 | 4.2:+10107919 | MS.gene58159:CDS |
AGGAAAAGCTTGAACTAAGC+AGG | 0.472967 | 4.2:+10097323 | MS.gene58159:CDS |
TGTATTCTTACAGCGAATGA+TGG | 0.474059 | 4.2:+10102087 | MS.gene58159:intron |
CTGTAAGGCATGCGTGGTCA+TGG | 0.476362 | 4.2:+10098095 | MS.gene58159:CDS |
AGCACAAATAAGTGGTGTGC+TGG | 0.479388 | 4.2:-10102172 | None:intergenic |
CTATTCACAGGTTTGCCTTG+AGG | 0.480472 | 4.2:+10102522 | MS.gene58159:intron |
ATTGCTGGTGCTATTGCTGC+CGG | 0.480813 | 4.2:+10099474 | MS.gene58159:CDS |
ATGCAAAGTTATGAAGGAAC+TGG | 0.481979 | 4.2:+10101049 | MS.gene58159:intron |
CCAAGAATGCTACTGTTGTA+AGG | 0.489834 | 4.2:+10100538 | MS.gene58159:CDS |
AAATGAGGAAGATCTGTTCT+GGG | 0.490856 | 4.2:-10105322 | None:intergenic |
CCAACAGTGAAGTCTTTGCT+TGG | 0.491005 | 4.2:+10100814 | MS.gene58159:CDS |
CGAGATAATGGAGCTTCTCC+GGG | 0.491889 | 4.2:-10105369 | None:intergenic |
TGCTAGTACATCTGCGTGAA+AGG | 0.492280 | 4.2:+10105344 | MS.gene58159:CDS |
CTTTGTTACTGCACCCAGTC+CGG | 0.496279 | 4.2:+10099597 | MS.gene58159:CDS |
TTGTTTGAGTTTATATGCAA+AGG | 0.497050 | 4.2:+10099634 | MS.gene58159:CDS |
ACTATCAATTGCCTCCTGTA+AGG | 0.497278 | 4.2:+10098080 | MS.gene58159:CDS |
TGTTCGCTGCTCGTGGCCGT+GGG | 0.501663 | 4.2:+10099427 | MS.gene58159:CDS |
TGTTTGAGTTTATATGCAAA+GGG | 0.501745 | 4.2:+10099635 | MS.gene58159:CDS |
ACCCATTAACAGTGGAAGAC+AGG | 0.504081 | 4.2:-10100852 | None:intergenic |
GCTAAGAGCACGGAGGGTGC+AGG | 0.504530 | 4.2:+10101127 | MS.gene58159:CDS |
TGATTCTTCGATTCATCCAC+CGG | 0.505238 | 4.2:-10102285 | None:intergenic |
CTGGGGATCCTATTGAAAGC+TGG | 0.505620 | 4.2:+10101759 | MS.gene58159:CDS |
CGCAGATGTACTAGCAAATG+AGG | 0.511263 | 4.2:-10105337 | None:intergenic |
TTTCATTGTTCATGATAGGC+GGG | 0.517313 | 4.2:+10097536 | MS.gene58159:CDS |
GCTTGTGTGTTACTCTGCAC+AGG | 0.520610 | 4.2:+10106900 | MS.gene58159:CDS |
TCCCTGTTGGACCACTGATA+CGG | 0.521720 | 4.2:+10099215 | MS.gene58159:CDS |
CCGGAGAAGCTCCATTATCT+CGG | 0.521760 | 4.2:+10105370 | MS.gene58159:CDS |
TTGTCAGTATAAAATCGAAC+CGG | 0.524708 | 4.2:+10108001 | MS.gene58159:CDS |
GTATTCCATGCCACGGAAAG+TGG | 0.525307 | 4.2:-10105794 | None:intergenic |
AGCGAAAGAGGTCCACGGTT+AGG | 0.528419 | 4.2:-10105405 | None:intergenic |
TCGAACTGAATCCCACTCTC+AGG | 0.529910 | 4.2:+10098029 | MS.gene58159:CDS |
TACATCTTTCAGCCGTGGCA+TGG | 0.532959 | 4.2:-10107451 | None:intergenic |
TCAGGACATTTCGCACATTG+AGG | 0.533303 | 4.2:+10106932 | MS.gene58159:CDS |
TGGCAATGAACTTACCTGAA+TGG | 0.533576 | 4.2:-10100589 | None:intergenic |
AGGGACAAATGGGGTTGGAA+AGG | 0.535630 | 4.2:+10107343 | MS.gene58159:intron |
GGAACCTCTTAGTGTTTCTG+TGG | 0.536334 | 4.2:+10107692 | MS.gene58159:CDS |
GGAATCTGGCCAATGTAGAA+AGG | 0.538089 | 4.2:-10105451 | None:intergenic |
ATGCCATCCCTAATATTAGC+AGG | 0.538179 | 4.2:+10101813 | MS.gene58159:CDS |
CTAAATGGAGATTTCCCTGT+TGG | 0.538752 | 4.2:+10099202 | MS.gene58159:CDS |
TCTTGTCCAAAATTGCATCA+AGG | 0.540070 | 4.2:-10099383 | None:intergenic |
AGTTACAGAAGCTGCAGAGA+AGG | 0.540274 | 4.2:+10104389 | MS.gene58159:CDS |
ATAGAGACAGTGGAAGGAGG+AGG | 0.542491 | 4.2:+10097770 | MS.gene58159:CDS |
CACACATCCTAGTGCAATGA+GGG | 0.543166 | 4.2:+10102687 | MS.gene58159:CDS |
TAAACCAGTTCCTGTTGAAG+AGG | 0.545632 | 4.2:+10098164 | MS.gene58159:CDS |
GCTTCTGTAACTGTAATTTG+TGG | 0.547860 | 4.2:-10104378 | None:intergenic |
GTTTGATGTACTTGAATACA+AGG | 0.548311 | 4.2:+10099657 | MS.gene58159:CDS |
TCAATTTCATCATTATTCAA+GGG | 0.550319 | 4.2:-10105602 | None:intergenic |
GCAAGGCTCAAATCAAATCA+AGG | 0.550985 | 4.2:+10097278 | MS.gene58159:CDS |
TGGATGAAGACCTCAACGAT+GGG | 0.551646 | 4.2:+10107712 | MS.gene58159:CDS |
TGAGAATGATGTTGACGATA+AGG | 0.553110 | 4.2:+10104347 | MS.gene58159:CDS |
TTGCTGGTGCTATTGCTGCC+GGG | 0.554680 | 4.2:+10099475 | MS.gene58159:CDS |
CTTCTGGCTTCCACTTTCCG+TGG | 0.555143 | 4.2:+10105784 | MS.gene58159:CDS |
ACGGCCACGAGCAGCGAACA+AGG | 0.556001 | 4.2:-10099424 | None:intergenic |
TGATCTATACTATGTCAATC+GGG | 0.556230 | 4.2:+10101941 | MS.gene58159:CDS |
CAGCTTTCAATAGGATCCCC+AGG | 0.557416 | 4.2:-10101758 | None:intergenic |
ACTGTCTGCAGTTATTATGA+AGG | 0.559735 | 4.2:+10104306 | MS.gene58159:intron |
TACCAAGTAGCACAAATAAG+TGG | 0.562485 | 4.2:-10102180 | None:intergenic |
AAAGACTTCACTGTTGGCAG+TGG | 0.564718 | 4.2:-10100808 | None:intergenic |
TCTTCATTATATGCTTAGCA+AGG | 0.565411 | 4.2:+10097261 | MS.gene58159:CDS |
CATCTTCAAAGGCATACCGC+TGG | 0.566759 | 4.2:-10107918 | None:intergenic |
CCAAGCAAAGACTTCACTGT+TGG | 0.571135 | 4.2:-10100814 | None:intergenic |
GCTAGATTCTCCATCTTCAA+AGG | 0.571573 | 4.2:-10107929 | None:intergenic |
TACTGTATAGGACGATATGA+AGG | 0.574051 | 4.2:+10107861 | MS.gene58159:intron |
TTAACAGGGACAAATGGGGT+TGG | 0.574911 | 4.2:+10107338 | MS.gene58159:intron |
GAGGTCCACGGTTAGGCCAA+AGG | 0.575632 | 4.2:-10105398 | None:intergenic |
GAATCCATCAGATATGCTCC+TGG | 0.578441 | 4.2:+10101740 | MS.gene58159:CDS |
TTCATTGTTCATGATAGGCG+GGG | 0.579763 | 4.2:+10097537 | MS.gene58159:CDS |
AAGTACAGGTGCGAAAGTGC+AGG | 0.580964 | 4.2:-10106840 | None:intergenic |
CATGAACAATGAAAATGCAT+CGG | 0.581663 | 4.2:-10097527 | None:intergenic |
CATGGTATTTGATCTCCACA+AGG | 0.584673 | 4.2:-10102595 | None:intergenic |
TATACTGACAAGACCACCTG+TGG | 0.585384 | 4.2:-10107989 | None:intergenic |
ATTCACAGGTTTGCCTTGAG+GGG | 0.585666 | 4.2:+10102524 | MS.gene58159:intron |
CCCAGACAAAATGAGGAAGA+AGG | 0.585824 | 4.2:+10096869 | None:intergenic |
AATCCATCAGATATGCTCCT+GGG | 0.586271 | 4.2:+10101741 | MS.gene58159:CDS |
GAAGTGTTCCACGTTGGACC+AGG | 0.586370 | 4.2:+10099237 | MS.gene58159:CDS |
GAAGTTACCCTCATTGCACT+AGG | 0.587370 | 4.2:-10102694 | None:intergenic |
GTTGCCTTGTTCGCTGCTCG+TGG | 0.587390 | 4.2:+10099420 | MS.gene58159:CDS |
TTAAAGTCTGAAAACGAGCA+TGG | 0.587411 | 4.2:+10108027 | MS.gene58159:CDS |
ACATCTGCGTGAAAGGCGCC+CGG | 0.587670 | 4.2:+10105351 | MS.gene58159:CDS |
AACGCCCTGTAGCCTGAGAG+TGG | 0.588671 | 4.2:-10098041 | None:intergenic |
AAGACAGGAAGACCAGATAT+GGG | 0.589306 | 4.2:-10100837 | None:intergenic |
AGCAAGAACTATAGAGACAG+TGG | 0.589349 | 4.2:+10097760 | MS.gene58159:CDS |
CGATGGGGCTAAACAAGTTG+AGG | 0.590660 | 4.2:+10107728 | MS.gene58159:CDS |
ACCTGATAGAATAACGTGAC+TGG | 0.590808 | 4.2:+10105554 | MS.gene58159:intron |
TGCCTCCTGTAAGGCATGCG+TGG | 0.591653 | 4.2:+10098089 | MS.gene58159:CDS |
AGCCATGGTCATCAACCTTG+TGG | 0.591954 | 4.2:+10102580 | MS.gene58159:CDS |
ATAAAACGATACCTGATCAC+GGG | 0.592447 | 4.2:-10096973 | None:intergenic |
ATCCCCAGGAGCATATCTGA+TGG | 0.593961 | 4.2:-10101744 | None:intergenic |
TAATTCACTATCCTTGTGGT+AGG | 0.594044 | 4.2:-10101976 | None:intergenic |
TTGTAACACCATAAAACAGT+TGG | 0.597418 | 4.2:-10097301 | None:intergenic |
ACTATAGAGACAGTGGAAGG+AGG | 0.598245 | 4.2:+10097767 | MS.gene58159:CDS |
AACTGCTCACAAAATTTCCA+TGG | 0.599225 | 4.2:-10102613 | None:intergenic |
AAAATAATTCACTATCCTTG+TGG | 0.600381 | 4.2:-10101980 | None:intergenic |
ATGTCTGCTAAGAGCACGGA+GGG | 0.601997 | 4.2:+10101121 | MS.gene58159:CDS |
AAATTCTACAAATATCTACA+TGG | 0.602639 | 4.2:+10107402 | MS.gene58159:CDS |
TATAAAACGATACCTGATCA+CGG | 0.604633 | 4.2:-10096974 | None:intergenic |
GACGAGATATCTGCCCCTCA+AGG | 0.606609 | 4.2:-10102537 | None:intergenic |
TAACCTGCTAATATTAGGGA+TGG | 0.607113 | 4.2:-10101816 | None:intergenic |
GGAGCTGAAGAAACTTAAAG+AGG | 0.607451 | 4.2:+10099177 | MS.gene58159:CDS |
TCATCCACAGAAACACTAAG+AGG | 0.607502 | 4.2:-10107696 | None:intergenic |
GACTGGCGAGCATTCATGCA+TGG | 0.609058 | 4.2:+10105571 | MS.gene58159:CDS |
TAGAGACAGTGGAAGGAGGA+GGG | 0.610550 | 4.2:+10097771 | MS.gene58159:CDS |
TCATTGTTCATGATAGGCGG+GGG | 0.611858 | 4.2:+10097538 | MS.gene58159:CDS |
CCAAATGTCTGCTAAGAGCA+CGG | 0.613472 | 4.2:+10101117 | MS.gene58159:CDS |
TAACTTACATCTTTCAGCCG+TGG | 0.614000 | 4.2:-10107456 | None:intergenic |
CCACACATCCTAGTGCAATG+AGG | 0.617308 | 4.2:+10102686 | MS.gene58159:CDS |
TGGAATACAAGCTTGCTATG+AGG | 0.617987 | 4.2:+10105809 | MS.gene58159:CDS |
ATTGATGCTGCAGGACTCAG+AGG | 0.619238 | 4.2:+10099135 | MS.gene58159:intron |
AATCCCACTCTCAGGCTACA+GGG | 0.620518 | 4.2:+10098037 | MS.gene58159:CDS |
ATGCGAGCTCCTGAAAGTGA+AGG | 0.624310 | 4.2:-10102652 | None:intergenic |
CAGTTTGTACACGATGGTGA+TGG | 0.626116 | 4.2:+10097832 | MS.gene58159:CDS |
CAAGCTTGTATTCCATGCCA+CGG | 0.626773 | 4.2:-10105801 | None:intergenic |
CGTCTCCTTTGGCCTAACCG+TGG | 0.629616 | 4.2:+10105393 | MS.gene58159:CDS |
GTGGATGAAGACCTCAACGA+TGG | 0.630682 | 4.2:+10107711 | MS.gene58159:CDS |
GCTATCCAAAGTTTGAGCCA+TGG | 0.630986 | 4.2:+10102565 | MS.gene58159:CDS |
CCTCATTGCACTAGGATGTG+TGG | 0.631104 | 4.2:-10102686 | None:intergenic |
TATTTGTATGACAGGACCGG+TGG | 0.632393 | 4.2:+10102269 | MS.gene58159:intron |
GTGGAACACTTCCGTATCAG+TGG | 0.634428 | 4.2:-10099226 | None:intergenic |
TTGATGCTGCAGGACTCAGA+GGG | 0.636185 | 4.2:+10099136 | MS.gene58159:intron |
ACGCCCTGTAGCCTGAGAGT+GGG | 0.637356 | 4.2:-10098040 | None:intergenic |
CTCCACAAGGTTGATGACCA+TGG | 0.637837 | 4.2:-10102582 | None:intergenic |
CTTGTTTAGCCCCATCGTTG+AGG | 0.638898 | 4.2:-10107722 | None:intergenic |
CTGTTTAACAGGGACAAATG+GGG | 0.641129 | 4.2:+10107334 | MS.gene58159:intron |
ATTCAGTTCGAAATCTGTCG+TGG | 0.643656 | 4.2:-10098017 | None:intergenic |
TTTGCATATAAACTCAAACA+AGG | 0.644235 | 4.2:-10099632 | None:intergenic |
AGACAAAATGAGGAAGAAGG+TGG | 0.648019 | 4.2:+10096872 | None:intergenic |
CTTGTGGAGATCAAATACCA+TGG | 0.649950 | 4.2:+10102596 | MS.gene58159:CDS |
AGATCGAATCAACCATGCCA+CGG | 0.650410 | 4.2:+10107439 | MS.gene58159:CDS |
TCACTCCTGAATTGCTCCAG+CGG | 0.651035 | 4.2:+10107902 | MS.gene58159:CDS |
CAAGAGCAGCTGATTTCCCA+CGG | 0.651139 | 4.2:-10099443 | None:intergenic |
AGAACTATAGAGACAGTGGA+AGG | 0.654646 | 4.2:+10097764 | MS.gene58159:CDS |
GTCACCGATAATGACAAACA+TGG | 0.659550 | 4.2:-10096946 | None:intergenic |
TCTAGTCGCTTCATATCATG+TGG | 0.661842 | 4.2:-10106213 | None:intergenic |
TCCGTATCAGTGGTCCAACA+GGG | 0.663742 | 4.2:-10099216 | None:intergenic |
ATCCATCAGATATGCTCCTG+GGG | 0.663879 | 4.2:+10101742 | MS.gene58159:CDS |
ACATGATATGAAGCGACTAG+AGG | 0.666290 | 4.2:+10106215 | MS.gene58159:CDS |
AATGCCTTGCAAAATACTGG+TGG | 0.667743 | 4.2:+10107958 | MS.gene58159:CDS |
CCAAAAGCGAAAGAGGTCCA+CGG | 0.671055 | 4.2:-10105410 | None:intergenic |
CTGAAGAACACACATCCCGA+AGG | 0.674615 | 4.2:-10097608 | None:intergenic |
AGATCACACTCACTTGCTGG+AGG | 0.685877 | 4.2:-10101924 | None:intergenic |
ATACTGACAAGACCACCTGT+GGG | 0.694097 | 4.2:-10107988 | None:intergenic |
GCTAACCAGTTTGTACACGA+TGG | 0.697246 | 4.2:+10097826 | MS.gene58159:CDS |
GATACGGAAGTGTTCCACGT+TGG | 0.701379 | 4.2:+10099231 | MS.gene58159:CDS |
GGATGAAGACCTCAACGATG+GGG | 0.701949 | 4.2:+10107713 | MS.gene58159:CDS |
TAATCCTACCTGGTCCAACG+TGG | 0.704729 | 4.2:-10099245 | None:intergenic |
CCAGTCATACCCATTAACAG+TGG | 0.707802 | 4.2:-10100860 | None:intergenic |
GACCACGCATGCCTTACAGG+AGG | 0.710844 | 4.2:-10098091 | None:intergenic |
AATGTCTGCTAAGAGCACGG+AGG | 0.777641 | 4.2:+10101120 | MS.gene58159:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 10096879 | 10108128 | 10096879 | ID=MS.gene58159 |
chr4.2 | mRNA | 10096879 | 10108128 | 10096879 | ID=MS.gene58159.t1;Parent=MS.gene58159 |
chr4.2 | exon | 10096879 | 10096983 | 10096879 | ID=MS.gene58159.t1.exon1;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10096879 | 10096983 | 10096879 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10097253 | 10097344 | 10097253 | ID=MS.gene58159.t1.exon2;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10097253 | 10097344 | 10097253 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10097459 | 10097630 | 10097459 | ID=MS.gene58159.t1.exon3;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10097459 | 10097630 | 10097459 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10097731 | 10097853 | 10097731 | ID=MS.gene58159.t1.exon4;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10097731 | 10097853 | 10097731 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10098012 | 10098185 | 10098012 | ID=MS.gene58159.t1.exon5;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10098012 | 10098185 | 10098012 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10099148 | 10099258 | 10099148 | ID=MS.gene58159.t1.exon6;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10099148 | 10099258 | 10099148 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10099363 | 10099496 | 10099363 | ID=MS.gene58159.t1.exon7;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10099363 | 10099496 | 10099363 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10099585 | 10099678 | 10099585 | ID=MS.gene58159.t1.exon8;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10099585 | 10099678 | 10099585 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10100501 | 10100596 | 10100501 | ID=MS.gene58159.t1.exon9;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10100501 | 10100596 | 10100501 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10100736 | 10100872 | 10100736 | ID=MS.gene58159.t1.exon10;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10100736 | 10100872 | 10100736 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10101057 | 10101148 | 10101057 | ID=MS.gene58159.t1.exon11;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10101057 | 10101148 | 10101057 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10101711 | 10101834 | 10101711 | ID=MS.gene58159.t1.exon12;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10101711 | 10101834 | 10101711 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10101920 | 10102007 | 10101920 | ID=MS.gene58159.t1.exon13;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10101920 | 10102007 | 10101920 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10102100 | 10102199 | 10102100 | ID=MS.gene58159.t1.exon14;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10102100 | 10102199 | 10102100 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10102283 | 10102335 | 10102283 | ID=MS.gene58159.t1.exon15;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10102283 | 10102335 | 10102283 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10102532 | 10102708 | 10102532 | ID=MS.gene58159.t1.exon16;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10102532 | 10102708 | 10102532 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10102803 | 10102840 | 10102803 | ID=MS.gene58159.t1.exon17;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10102803 | 10102840 | 10102803 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10104317 | 10104410 | 10104317 | ID=MS.gene58159.t1.exon18;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10104317 | 10104410 | 10104317 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10105295 | 10105474 | 10105295 | ID=MS.gene58159.t1.exon19;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10105295 | 10105474 | 10105295 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10105563 | 10105671 | 10105563 | ID=MS.gene58159.t1.exon20;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10105563 | 10105671 | 10105563 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10105761 | 10105830 | 10105761 | ID=MS.gene58159.t1.exon21;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10105761 | 10105830 | 10105761 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10106122 | 10106269 | 10106122 | ID=MS.gene58159.t1.exon22;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10106122 | 10106269 | 10106122 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10106825 | 10106953 | 10106825 | ID=MS.gene58159.t1.exon23;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10106825 | 10106953 | 10106825 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10107345 | 10107470 | 10107345 | ID=MS.gene58159.t1.exon24;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10107345 | 10107470 | 10107345 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10107684 | 10107749 | 10107684 | ID=MS.gene58159.t1.exon25;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10107684 | 10107749 | 10107684 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
chr4.2 | exon | 10107871 | 10108128 | 10107871 | ID=MS.gene58159.t1.exon26;Parent=MS.gene58159.t1 |
chr4.2 | CDS | 10107871 | 10108128 | 10107871 | ID=cds.MS.gene58159.t1;Parent=MS.gene58159.t1 |
Gene Sequence |
Protein sequence |