AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36472


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36472.t1 MTR_4g094615 97.826 460 4 2 1 454 1 460 0.0 916
MS.gene36472.t1 MTR_4g094615 99.458 369 2 0 1 369 1 369 0.0 759
MS.gene36472.t1 MTR_4g094615 99.458 369 2 0 1 369 1 369 0.0 759
MS.gene36472.t1 MTR_8g090145 68.715 179 40 4 284 454 24 194 6.42e-62 201
MS.gene36472.t1 MTR_4g087670 65.909 44 15 0 153 196 12 55 2.23e-14 68.2
MS.gene36472.t1 MTR_7g012400 24.918 305 185 10 81 346 107 406 6.72e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36472.t1 AT3G51270 66.737 475 123 8 1 454 1 461 0.0 561
MS.gene36472.t1 AT3G51270 66.737 475 123 8 1 454 1 461 0.0 561
MS.gene36472.t1 AT3G51270 66.737 475 123 8 1 454 1 461 0.0 561
MS.gene36472.t1 AT3G51270 64.523 482 119 11 1 454 1 458 0.0 532

Find 83 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTCTTTGTGAGAATTCC+TGG 0.205564 4.1:-18514800 None:intergenic
GGTTCTCACCGCCGTTGAAT+TGG 0.262655 4.1:+18509287 MS.gene36472:CDS
AACATCGTAGTAGTTATAAT+TGG 0.288616 4.1:+18509790 MS.gene36472:CDS
CAATTGTTGGTATAATTATT+CGG 0.324204 4.1:+18510710 MS.gene36472:CDS
GAACTTGCTGCTAGTGGCTT+TGG 0.348488 4.1:+18513337 MS.gene36472:CDS
ATCAAAACTATGGTCAATAA+AGG 0.354092 4.1:+18509483 MS.gene36472:CDS
GTTCTCACCGCCGTTGAATT+GGG 0.377927 4.1:+18509288 MS.gene36472:CDS
GTTCAGCGGGGACAATTTCA+TGG 0.402449 4.1:-18509320 None:intergenic
GCTCTTACATCTTTGCATTA+CGG 0.410534 4.1:-18510969 None:intergenic
CGTAGGGGACGGAAGAAACT+TGG 0.423011 4.1:+18514775 MS.gene36472:CDS
TGCTATAGCATCAGCTCGTA+GGG 0.423360 4.1:+18514759 MS.gene36472:CDS
CGATTATGTTCCACAGCCTC+TGG 0.430757 4.1:-18509970 None:intergenic
ATTTGATTTGCAGGAGGAAG+TGG 0.434562 4.1:+18514690 MS.gene36472:intron
ATTTATCTGCAGTTTATTGA+AGG 0.437822 4.1:+18513461 MS.gene36472:intron
GTCTCCGTTGGTCGCCAAAT+CGG 0.440264 4.1:+18509513 MS.gene36472:CDS
TGTTCCACAGCCTCTGGAAC+AGG 0.441351 4.1:-18509964 None:intergenic
GGAAAAGAGGAGAGATTTGA+AGG 0.444975 4.1:+18514361 MS.gene36472:CDS
GTTCTGCAAATGCAGCGTTC+AGG 0.447538 4.1:+18510651 MS.gene36472:intron
TTCTTTACATTTGTCAGAGC+AGG 0.450728 4.1:+18513568 MS.gene36472:CDS
TTTCAATGAATTTAACATCA+TGG 0.456130 4.1:+18510762 MS.gene36472:CDS
ATCGGCGTTGGAAAAGAATC+TGG 0.462402 4.1:+18509531 MS.gene36472:CDS
TTTGAGGTTGCTGATGAAGA+TGG 0.478832 4.1:+18509690 MS.gene36472:CDS
TGAAAACAGCGGATCTGAAA+AGG 0.481623 4.1:+18514384 MS.gene36472:CDS
GATAACGACGATTCTAATGA+AGG 0.490096 4.1:+18513250 MS.gene36472:CDS
TAAAGAATTTGCTTTCATGA+AGG 0.495198 4.1:+18509839 MS.gene36472:CDS
TTCAAATGCAAATGAGCAGC+TGG 0.501357 4.1:+18514851 MS.gene36472:CDS
TCTTCAATAGACAGCAGTGC+TGG 0.505671 4.1:+18513301 MS.gene36472:CDS
AATCATAACCAAGGTAGGTA+AGG 0.513088 4.1:-18509452 None:intergenic
GACGGAAGAAACTTGGATCC+AGG 0.515564 4.1:+18514782 MS.gene36472:CDS
TTTGATTTGCAGGAGGAAGT+GGG 0.518753 4.1:+18514691 MS.gene36472:intron
CATGTTTGAGACGAGCGATT+CGG 0.519870 4.1:-18509350 None:intergenic
GTGCTATAGCATCAGCTCGT+AGG 0.522126 4.1:+18514758 MS.gene36472:CDS
TGTTGGTATAATTATTCGGC+TGG 0.523681 4.1:+18510714 MS.gene36472:CDS
ATTTCCTGTTCCAGAGGCTG+TGG 0.524597 4.1:+18509960 MS.gene36472:CDS
TTATGGCTATGAAGTTACAT+AGG 0.526717 4.1:+18509718 MS.gene36472:CDS
TGAAACCATGTTTAGGATGA+GGG 0.529887 4.1:+18514325 MS.gene36472:intron
CAAACATGGTGGCACCTACA+AGG 0.530222 4.1:+18509365 MS.gene36472:CDS
GGATTCCGCCTTACCTACCT+TGG 0.531140 4.1:+18509444 MS.gene36472:CDS
AAGAAAATCATAACCAAGGT+AGG 0.534589 4.1:-18509457 None:intergenic
GTTTCTCATGCCCAATTCAA+CGG 0.538032 4.1:-18509298 None:intergenic
ATTCGGTCGATGAGTTCAGC+GGG 0.538540 4.1:-18509333 None:intergenic
AAGATGAGGAAGATATTCAA+AGG 0.538915 4.1:+18513365 MS.gene36472:CDS
TGATTTGCTAGATATATTTG+AGG 0.539655 4.1:+18509674 MS.gene36472:intron
TGCGACACAGACACCATTTG+CGG 0.549608 4.1:-18510946 None:intergenic
GCTATGAAGTTACATAGGCT+TGG 0.554098 4.1:+18509723 MS.gene36472:CDS
AAAGGTGTCTTCGTCTCCGT+TGG 0.561674 4.1:+18509501 MS.gene36472:CDS
ACATGAAAGTCATGGAAAAG+AGG 0.563019 4.1:+18514348 MS.gene36472:CDS
ACAAATTCTGATAGTGAAGA+TGG 0.564391 4.1:+18513500 MS.gene36472:CDS
GTTGGTCGCCAAATCGGCGT+TGG 0.564870 4.1:+18509519 MS.gene36472:CDS
GATAAGGAACTTGCTGCTAG+TGG 0.569623 4.1:+18513331 MS.gene36472:CDS
AGATGAGGAAGATATTCAAA+GGG 0.572279 4.1:+18513366 MS.gene36472:CDS
CGAATCGCTCGTCTCAAACA+TGG 0.579259 4.1:+18509351 MS.gene36472:CDS
GATGAGGGACATGAAAGTCA+TGG 0.580821 4.1:+18514340 MS.gene36472:CDS
GTAATCATGTCGCTTGTCCA+AGG 0.582155 4.1:+18510000 MS.gene36472:CDS
AACGCCGATTTGGCGACCAA+CGG 0.583074 4.1:-18509517 None:intergenic
GATCAGGCTTTGCAAACACA+TGG 0.584897 4.1:+18509937 MS.gene36472:intron
TAGCATCAGCTCGTAGGGGA+CGG 0.585566 4.1:+18514764 MS.gene36472:CDS
CAAATTCTTTAAGCGCAGCA+AGG 0.587058 4.1:-18509827 None:intergenic
ATTATTCGGCTGGCAGAACA+TGG 0.588090 4.1:+18510724 MS.gene36472:CDS
AATGAAGGGAGAGAGGAAGC+CGG 0.589391 4.1:+18513265 MS.gene36472:CDS
CAGGAATTCTCACAAAGACA+AGG 0.593405 4.1:+18514801 MS.gene36472:CDS
TAGGTCATCTCAAAATGCTA+AGG 0.601055 4.1:+18514828 MS.gene36472:CDS
GCACTTACAGAGGATAACCT+TGG 0.602178 4.1:-18510017 None:intergenic
CGATTCTAATGAAGGGAGAG+AGG 0.607327 4.1:+18513258 MS.gene36472:CDS
CCCTAAAATCATCTTTCGAG+AGG 0.609662 4.1:-18509266 None:intergenic
ACATGGATTTCCTGTTCCAG+AGG 0.611150 4.1:+18509954 MS.gene36472:CDS
ATAACGACGATTCTAATGAA+GGG 0.618074 4.1:+18513251 MS.gene36472:CDS
TCTGCAGTTTATTGAAGGCG+AGG 0.623489 4.1:+18513466 MS.gene36472:intron
CATAACCAAGGTAGGTAAGG+CGG 0.628376 4.1:-18509449 None:intergenic
GCAGTTTATTGAAGGCGAGG+TGG 0.636859 4.1:+18513469 MS.gene36472:intron
CATGACTCTACTAAATACGA+TGG 0.643215 4.1:+18509423 MS.gene36472:CDS
CTCACAAAGACAAGGGTGGT+AGG 0.646398 4.1:+18514809 MS.gene36472:CDS
TGATAGTGAAGATGGTGACT+TGG 0.646642 4.1:+18513508 MS.gene36472:CDS
AAAGGAAGATGCAAGCGACA+CGG 0.662177 4.1:+18514402 MS.gene36472:CDS
TGGCAAGAAAATCATAACCA+AGG 0.675307 4.1:-18509461 None:intergenic
GATTCGGTCGATGAGTTCAG+CGG 0.676008 4.1:-18509334 None:intergenic
TCTCATGCCCAATTCAACGG+CGG 0.688093 4.1:-18509295 None:intergenic
AGGAATTCTCACAAAGACAA+GGG 0.690996 4.1:+18514802 MS.gene36472:CDS
AGATTTGAAGGTGAAAACAG+CGG 0.713597 4.1:+18514373 MS.gene36472:CDS
AATTCTCACAAAGACAAGGG+TGG 0.720526 4.1:+18514805 MS.gene36472:CDS
ATCGCTCGTCTCAAACATGG+TGG 0.722151 4.1:+18509354 MS.gene36472:CDS
GCTATAGCATCAGCTCGTAG+GGG 0.722557 4.1:+18514760 MS.gene36472:CDS
TTCGGTCGATGAGTTCAGCG+GGG 0.765299 4.1:-18509332 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTATTGTTAAATTATTTT+CGG + chr4.1:18511753-18511772 MS.gene36472:intron 10.0%
!! AAAATATCTATAAATCTCTT+AGG - chr4.1:18510462-18510481 None:intergenic 15.0%
!! AAAGAAATATAAAACAATAG+TGG + chr4.1:18513707-18513726 MS.gene36472:intron 15.0%
!! AAATCAAATTAATACCATTA+TGG - chr4.1:18514679-18514698 None:intergenic 15.0%
!! GAAAATTAATTAACTACAAA+AGG + chr4.1:18513838-18513857 MS.gene36472:intron 15.0%
!! TCAATTAGAATTGTAATATA+CGG - chr4.1:18514294-18514313 None:intergenic 15.0%
!!! AACTTTTTATTGAGTTTAAT+TGG + chr4.1:18511193-18511212 MS.gene36472:intron 15.0%
!!! AGTTTAAAATTTTACTTTTG+CGG - chr4.1:18512245-18512264 None:intergenic 15.0%
!!! TTAACTTATTGAAAGATTTT+GGG + chr4.1:18513138-18513157 MS.gene36472:intron 15.0%
!!! TTATTTTGATGAATTTAGTT+AGG + chr4.1:18513667-18513686 MS.gene36472:intron 15.0%
!! AATGCATTATAACTAAGAAA+AGG - chr4.1:18513408-18513427 None:intergenic 20.0%
!! AGGATAGAGTTTAAATATTA+TGG + chr4.1:18510493-18510512 MS.gene36472:intron 20.0%
!! ATAATAGTGATATTATGTGT+TGG - chr4.1:18511333-18511352 None:intergenic 20.0%
!! ATGAGAAATAACATAGATTT+CGG + chr4.1:18510293-18510312 MS.gene36472:intron 20.0%
!! CAATTGTTGGTATAATTATT+CGG + chr4.1:18510710-18510729 MS.gene36472:CDS 20.0%
!! CATTTCAAAATTAAGGAATT+TGG + chr4.1:18511537-18511556 MS.gene36472:intron 20.0%
!! GAAAAAAAACAGAATTTGAA+GGG - chr4.1:18511018-18511037 None:intergenic 20.0%
!! GATAAATTTGAAGATATTTG+AGG - chr4.1:18513448-18513467 None:intergenic 20.0%
!! GGATAGAGTTTAAATATTAT+GGG + chr4.1:18510494-18510513 MS.gene36472:intron 20.0%
!! GTATCAAATTGTATCAATTA+GGG - chr4.1:18512672-18512691 None:intergenic 20.0%
!! TAATAGTGATATTATGTGTT+GGG - chr4.1:18511332-18511351 None:intergenic 20.0%
!! TATCAAATTGTATCAATTAG+GGG - chr4.1:18512671-18512690 None:intergenic 20.0%
!! TGCATCAATATATTTCTTAT+TGG + chr4.1:18512293-18512312 MS.gene36472:intron 20.0%
!! TGTATCAAATTGTATCAATT+AGG - chr4.1:18512673-18512692 None:intergenic 20.0%
!! TGTTATATTAGAAGAATCAA+GGG - chr4.1:18513796-18513815 None:intergenic 20.0%
!! TTAGTTAAGTAGTAATGTTA+AGG + chr4.1:18511581-18511600 MS.gene36472:intron 20.0%
!! TTTCAATGAATTTAACATCA+TGG + chr4.1:18510762-18510781 MS.gene36472:CDS 20.0%
!!! AAAATTAAGGAATTTGGAAT+TGG + chr4.1:18511543-18511562 MS.gene36472:intron 20.0%
!!! AAATTAAGGAATTTGGAATT+GGG + chr4.1:18511544-18511563 MS.gene36472:intron 20.0%
!!! ACAAGATTTTTATTTTGGAT+CGG + chr4.1:18512602-18512621 MS.gene36472:intron 20.0%
!!! AGATATTTTGAATTACTCTA+AGG + chr4.1:18510473-18510492 MS.gene36472:intron 20.0%
!!! CTTAACTTATTGAAAGATTT+TGG + chr4.1:18513137-18513156 MS.gene36472:intron 20.0%
!!! TCATTACATGTCATTTTTTA+TGG + chr4.1:18510847-18510866 MS.gene36472:intron 20.0%
!!! TTATTTCTAGAAAATATCAC+AGG - chr4.1:18511975-18511994 None:intergenic 20.0%
!!! TTCTTCATGATGAATTTTTT+GGG + chr4.1:18514481-18514500 MS.gene36472:intron 20.0%
!!! TTTCTTCATGATGAATTTTT+TGG + chr4.1:18514480-18514499 MS.gene36472:intron 20.0%
! AAAAATTGATTGCTCAACAA+AGG - chr4.1:18511916-18511935 None:intergenic 25.0%
! AAAATTGATTGCTCAACAAA+GGG - chr4.1:18511915-18511934 None:intergenic 25.0%
! AAAATTTACATGTTGCACTT+TGG + chr4.1:18512486-18512505 MS.gene36472:intron 25.0%
! AACATCGTAGTAGTTATAAT+TGG + chr4.1:18509790-18509809 MS.gene36472:CDS 25.0%
! AATTCAAACATTGATACTAG+GGG + chr4.1:18512051-18512070 MS.gene36472:intron 25.0%
! AGAGATACCAAATAGAAAAT+GGG - chr4.1:18512970-18512989 None:intergenic 25.0%
! ATAATTGCTAAGTACTCTTA+GGG + chr4.1:18510144-18510163 MS.gene36472:intron 25.0%
! ATATCACAGGACAAAAATTA+AGG - chr4.1:18511962-18511981 None:intergenic 25.0%
! ATCAAAACTATGGTCAATAA+AGG + chr4.1:18509483-18509502 MS.gene36472:CDS 25.0%
! ATTTATCTGCAGTTTATTGA+AGG + chr4.1:18513461-18513480 MS.gene36472:intron 25.0%
! CAAAAATATTCAGTTTCTTG+CGG - chr4.1:18512135-18512154 None:intergenic 25.0%
! CAAACAAAAGATAGAAAATG+AGG - chr4.1:18511101-18511120 None:intergenic 25.0%
! CAAATATATGCGGTTTAATT+TGG - chr4.1:18512528-18512547 None:intergenic 25.0%
! CAAATTAAACCGCATATATT+TGG + chr4.1:18512526-18512545 MS.gene36472:intron 25.0%
! CAAGGAAAGATTATAAGTTA+AGG - chr4.1:18511383-18511402 None:intergenic 25.0%
! CAATATACTAATAGTGTGTA+TGG - chr4.1:18513079-18513098 None:intergenic 25.0%
! CATCATATCTTAAATTTCTG+TGG - chr4.1:18511139-18511158 None:intergenic 25.0%
! CTCATACACAGTAAAATAAT+AGG - chr4.1:18512448-18512467 None:intergenic 25.0%
! GAATTCAAACATTGATACTA+GGG + chr4.1:18512050-18512069 MS.gene36472:intron 25.0%
! GGAAAAAAAACAGAATTTGA+AGG - chr4.1:18511019-18511038 None:intergenic 25.0%
! GTATGACAATAAAAAGCTAA+TGG - chr4.1:18513602-18513621 None:intergenic 25.0%
! GTGTTATATTAGAAGAATCA+AGG - chr4.1:18513797-18513816 None:intergenic 25.0%
! TATAATTGCTAAGTACTCTT+AGG + chr4.1:18510143-18510162 MS.gene36472:intron 25.0%
! TATCAATGTTTGAATTCCTA+GGG - chr4.1:18512047-18512066 None:intergenic 25.0%
! TATCACAGGACAAAAATTAA+GGG - chr4.1:18511961-18511980 None:intergenic 25.0%
! TATTGTCATACAAGATATAC+TGG + chr4.1:18513611-18513630 MS.gene36472:intron 25.0%
! TCAAACATAAAAGTCGTTTA+GGG + chr4.1:18510056-18510075 MS.gene36472:intron 25.0%
! TCCAAAATAAAAATCTTGTG+CGG - chr4.1:18512601-18512620 None:intergenic 25.0%
! TGATGAAGATGGAAAAATTA+TGG + chr4.1:18509701-18509720 MS.gene36472:CDS 25.0%
! TTAAGATTAAGAGTTGAGTA+AGG - chr4.1:18510358-18510377 None:intergenic 25.0%
! TTCAAACATAAAAGTCGTTT+AGG + chr4.1:18510055-18510074 MS.gene36472:intron 25.0%
! TTGTTAATGAAACCATGTTT+AGG + chr4.1:18514318-18514337 MS.gene36472:intron 25.0%
!! AATTAAGGAATTTGGAATTG+GGG + chr4.1:18511545-18511564 MS.gene36472:intron 25.0%
!! GATTTGATCCTAATTTTCTA+TGG + chr4.1:18512773-18512792 MS.gene36472:intron 25.0%
!! GCATAATTAAAGAAGGTTTT+GGG + chr4.1:18514030-18514049 MS.gene36472:intron 25.0%
!! GGTGTTACATTTCAAAATTA+AGG + chr4.1:18511530-18511549 MS.gene36472:intron 25.0%
!! TAAAGAATTTGCTTTCATGA+AGG + chr4.1:18509839-18509858 MS.gene36472:CDS 25.0%
!! TTATAATCTTTCCTTGTTTC+AGG + chr4.1:18511387-18511406 MS.gene36472:intron 25.0%
!! TTTATAGAATCCTTGTTATC+TGG + chr4.1:18514639-18514658 MS.gene36472:intron 25.0%
!! TTTTGATGAATTTAGTTAGG+AGG + chr4.1:18513670-18513689 MS.gene36472:intron 25.0%
!!! AAAATTTTACTTTTGCGGTT+CGG - chr4.1:18512240-18512259 None:intergenic 25.0%
!!! ACTGCATAACTTTTTTTGAA+CGG + chr4.1:18513815-18513834 MS.gene36472:intron 25.0%
!!! ATGGTATTAATTTGATTTGC+AGG + chr4.1:18514681-18514700 MS.gene36472:intron 25.0%
!!! ATTTAAAGTTTTCATTGCAC+TGG + chr4.1:18514127-18514146 MS.gene36472:intron 25.0%
!!! GTTATTTTGACATTATGTGT+TGG + chr4.1:18511464-18511483 MS.gene36472:intron 25.0%
!!! TGATTTGCTAGATATATTTG+AGG + chr4.1:18509674-18509693 MS.gene36472:intron 25.0%
!!! TTTATTGACCATAGTTTTGA+TGG - chr4.1:18509484-18509503 None:intergenic 25.0%
AACAAATAGACTCATCTGTT+AGG + chr4.1:18513743-18513762 MS.gene36472:intron 30.0%
AACAATTCAAGTACATAGCT+AGG - chr4.1:18509878-18509897 None:intergenic 30.0%
AAGAAAATCATAACCAAGGT+AGG - chr4.1:18509460-18509479 None:intergenic 30.0%
AAGATCTTAACATGCAAAAC+AGG - chr4.1:18512709-18512728 None:intergenic 30.0%
AAGATGAGGAAGATATTCAA+AGG + chr4.1:18513365-18513384 MS.gene36472:CDS 30.0%
AATAAAAATCTTGTGCGGTT+CGG - chr4.1:18512596-18512615 None:intergenic 30.0%
AATGCAGAACAAACATTAGA+CGG - chr4.1:18511678-18511697 None:intergenic 30.0%
ACAAATAGACTCATCTGTTA+GGG + chr4.1:18513744-18513763 MS.gene36472:intron 30.0%
ACAATTCAAGTACATAGCTA+GGG - chr4.1:18509877-18509896 None:intergenic 30.0%
ACAGATCTTAGATTAACTAC+AGG - chr4.1:18514219-18514238 None:intergenic 30.0%
ACATCTTGTTCGTTTAGATA+AGG + chr4.1:18510263-18510282 MS.gene36472:intron 30.0%
AGATGAGGAAGATATTCAAA+GGG + chr4.1:18513366-18513385 MS.gene36472:CDS 30.0%
AGCATTTGCCATAGAAAATT+AGG - chr4.1:18512784-18512803 None:intergenic 30.0%
ATAACATAGATTTCGGATTG+TGG + chr4.1:18510300-18510319 MS.gene36472:intron 30.0%
ATAACGACGATTCTAATGAA+GGG + chr4.1:18513251-18513270 MS.gene36472:CDS 30.0%
ATTGCTTGAATTTGTATGCT+TGG + chr4.1:18510629-18510648 MS.gene36472:intron 30.0%
ATTGGTATTACATTAGTACC+AGG + chr4.1:18510203-18510222 MS.gene36472:intron 30.0%
CAAAACCAGTGTAAAATATG+TGG - chr4.1:18510602-18510621 None:intergenic 30.0%
CAAATCAAGTAGCATGAAAA+AGG - chr4.1:18512759-18512778 None:intergenic 30.0%
CAGAGATACCAAATAGAAAA+TGG - chr4.1:18512971-18512990 None:intergenic 30.0%
CCTTTACATGAAAACCATAA+TGG + chr4.1:18514662-18514681 MS.gene36472:intron 30.0%
CTAATGTTTGTTCTGCATTA+AGG + chr4.1:18511679-18511698 MS.gene36472:intron 30.0%
GGAATTCAAACATTGATACT+AGG + chr4.1:18512049-18512068 MS.gene36472:intron 30.0%
GGACAACAAACATAAAACAA+CGG + chr4.1:18513887-18513906 MS.gene36472:intron 30.0%
GTATCAATGTTTGAATTCCT+AGG - chr4.1:18512048-18512067 None:intergenic 30.0%
TCATACAAGCATGAAATCAA+AGG - chr4.1:18511040-18511059 None:intergenic 30.0%
TGAACCTAAAACAGAAAAGA+GGG - chr4.1:18513204-18513223 None:intergenic 30.0%
TGATATTCTAAGTGAACTGT+GGG + chr4.1:18514177-18514196 MS.gene36472:intron 30.0%
TGCATGTTAAGATCTTTGAT+AGG + chr4.1:18512713-18512732 MS.gene36472:intron 30.0%
TTATGGCTATGAAGTTACAT+AGG + chr4.1:18509718-18509737 MS.gene36472:CDS 30.0%
TTGAACCTAAAACAGAAAAG+AGG - chr4.1:18513205-18513224 None:intergenic 30.0%
TTTCTATTTGGTATCTCTGA+TGG + chr4.1:18512972-18512991 MS.gene36472:intron 30.0%
TTTGTATAACATTTGACGCA+TGG + chr4.1:18510173-18510192 MS.gene36472:intron 30.0%
! ACAAATTCTGATAGTGAAGA+TGG + chr4.1:18513500-18513519 MS.gene36472:CDS 30.0%
! ATACAAGATATACTGGCTAT+GGG + chr4.1:18513618-18513637 MS.gene36472:intron 30.0%
! ATCCAATTGCATTTTCATCT+TGG - chr4.1:18514547-18514566 None:intergenic 30.0%
! ATTAAGGAATTTGGAATTGG+GGG + chr4.1:18511546-18511565 MS.gene36472:intron 30.0%
! CCATTATGGTTTTCATGTAA+AGG - chr4.1:18514665-18514684 None:intergenic 30.0%
! CGCAAGAAACTGAATATTTT+TGG + chr4.1:18512133-18512152 MS.gene36472:intron 30.0%
! GGCATAATTAAAGAAGGTTT+TGG + chr4.1:18514029-18514048 MS.gene36472:intron 30.0%
! GTTTGAAACAACACGAAAAA+GGG - chr4.1:18510042-18510061 None:intergenic 30.0%
! TCCAATTGCATTTTCATCTT+GGG - chr4.1:18514546-18514565 None:intergenic 30.0%
! TGAAGAAAAACAGAGTTTTC+CGG - chr4.1:18513287-18513306 None:intergenic 30.0%
! TGTTTGAAACAACACGAAAA+AGG - chr4.1:18510043-18510062 None:intergenic 30.0%
! TTTTCTTGCCATCAAAACTA+TGG + chr4.1:18509473-18509492 MS.gene36472:CDS 30.0%
!! ACCGCACAAGATTTTTATTT+TGG + chr4.1:18512597-18512616 MS.gene36472:intron 30.0%
!! ATATGCGGTTTAATTTGGAT+CGG - chr4.1:18512523-18512542 None:intergenic 30.0%
!! ATGTTTGTTGTCCTGTAAAT+GGG - chr4.1:18513880-18513899 None:intergenic 30.0%
!! GTATTAATTTGATTTGCAGG+AGG + chr4.1:18514684-18514703 MS.gene36472:intron 30.0%
!! TATGTTTGTTGTCCTGTAAA+TGG - chr4.1:18513881-18513900 None:intergenic 30.0%
!! TCTTCAAGTTTTTCAGAAAG+AGG + chr4.1:18511435-18511454 MS.gene36472:CDS 30.0%
!! TTGTTCTTAAGCTTGCTTTT+TGG + chr4.1:18510543-18510562 MS.gene36472:intron 30.0%
!!! AAAGATTTTGGGTTTGTCTT+TGG + chr4.1:18513149-18513168 MS.gene36472:intron 30.0%
!!! ACAGTTTTTGAGACAATTGT+TGG + chr4.1:18510697-18510716 MS.gene36472:CDS 30.0%
!!! CACATATTTTACACTGGTTT+TGG + chr4.1:18510600-18510619 MS.gene36472:intron 30.0%
!!! CTGCATAACTTTTTTTGAAC+GGG + chr4.1:18513816-18513835 MS.gene36472:intron 30.0%
!!! GTTTAATTTGGATCGGTTTT+TGG - chr4.1:18512516-18512535 None:intergenic 30.0%
!!! TGAATATTTTTGGATGCGTT+TGG + chr4.1:18512143-18512162 MS.gene36472:intron 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG - chr4.1:18512091-18512110 None:intergenic 30.0%
!!! TTTTTTATGGCTTTTACCTC+TGG + chr4.1:18510860-18510879 MS.gene36472:intron 30.0%
AAAATTAAGGGACAAGACAC+AGG - chr4.1:18511949-18511968 None:intergenic 35.0%
AAGGATAGACACAGGAATAT+AGG + chr4.1:18511698-18511717 MS.gene36472:intron 35.0%
AAGGGACATAATACCATACA+AGG - chr4.1:18511000-18511019 None:intergenic 35.0%
AATCATAACCAAGGTAGGTA+AGG - chr4.1:18509455-18509474 None:intergenic 35.0%
AATTGGTACGTAGTATGTAC+TGG + chr4.1:18511210-18511229 MS.gene36472:intron 35.0%
ACATGAAAGTCATGGAAAAG+AGG + chr4.1:18514348-18514367 MS.gene36472:CDS 35.0%
ACCAGTGTAAAATATGTGGA+AGG - chr4.1:18510598-18510617 None:intergenic 35.0%
ACGAACAAGATGTAAAAGCA+AGG - chr4.1:18510256-18510275 None:intergenic 35.0%
AGATTTGAAGGTGAAAACAG+CGG + chr4.1:18514373-18514392 MS.gene36472:CDS 35.0%
AGGAAGATATTCAAAGGGTA+TGG + chr4.1:18513371-18513390 MS.gene36472:intron 35.0%
AGGAATTCTCACAAAGACAA+GGG + chr4.1:18514802-18514821 MS.gene36472:CDS 35.0%
AGTCAACTGCTAGATATGTA+AGG - chr4.1:18511607-18511626 None:intergenic 35.0%
ATAAAGCCTAGAAAGCAAGT+TGG - chr4.1:18514099-18514118 None:intergenic 35.0%
ATATTTGGATCTGATCGGTT+CGG + chr4.1:18512541-18512560 MS.gene36472:intron 35.0%
ATTGTCTCAAAAACTGTCTC+TGG - chr4.1:18510694-18510713 None:intergenic 35.0%
CAAAATGAGCAACTTTGCAT+TGG - chr4.1:18512907-18512926 None:intergenic 35.0%
CAAATAGACTCATCTGTTAG+GGG + chr4.1:18513745-18513764 MS.gene36472:intron 35.0%
CATGACTCTACTAAATACGA+TGG + chr4.1:18509423-18509442 MS.gene36472:CDS 35.0%
CCAGTGTAAAATATGTGGAA+GGG - chr4.1:18510597-18510616 None:intergenic 35.0%
CGAACAAGATGTAAAAGCAA+GGG - chr4.1:18510255-18510274 None:intergenic 35.0%
CGATCAGATCCAAATATATG+CGG - chr4.1:18512538-18512557 None:intergenic 35.0%
CGCATATATTTGGATCTGAT+CGG + chr4.1:18512536-18512555 MS.gene36472:intron 35.0%
GATAACGACGATTCTAATGA+AGG + chr4.1:18513250-18513269 MS.gene36472:CDS 35.0%
GCTCTTACATCTTTGCATTA+CGG - chr4.1:18510972-18510991 None:intergenic 35.0%
GGACAAATTATCAAGACAAC+TGG - chr4.1:18513183-18513202 None:intergenic 35.0%
GGATTGTATATCTAGGCTTT+AGG - chr4.1:18513918-18513937 None:intergenic 35.0%
GTGATATTCTAAGTGAACTG+TGG + chr4.1:18514176-18514195 MS.gene36472:intron 35.0%
TAGGTCATCTCAAAATGCTA+AGG + chr4.1:18514828-18514847 MS.gene36472:CDS 35.0%
TATGCCGTGTCATATTCATA+GGG - chr4.1:18514015-18514034 None:intergenic 35.0%
TCATCCCTATGAATATGACA+CGG + chr4.1:18514008-18514027 MS.gene36472:intron 35.0%
TCCCAAGATGAAAATGCAAT+TGG + chr4.1:18514542-18514561 MS.gene36472:intron 35.0%
TGACACGGCATAATTAAAGA+AGG + chr4.1:18514023-18514042 MS.gene36472:intron 35.0%
TGGCAAGAAAATCATAACCA+AGG - chr4.1:18509464-18509483 None:intergenic 35.0%
TGTTGGTATAATTATTCGGC+TGG + chr4.1:18510714-18510733 MS.gene36472:CDS 35.0%
TTATGCCGTGTCATATTCAT+AGG - chr4.1:18514016-18514035 None:intergenic 35.0%
TTCTTTACATTTGTCAGAGC+AGG + chr4.1:18513568-18513587 MS.gene36472:CDS 35.0%
TTGTCTCAAAAACTGTCTCT+GGG - chr4.1:18510693-18510712 None:intergenic 35.0%
TTTACAGCATTCCTTGTTAG+CGG - chr4.1:18514520-18514539 None:intergenic 35.0%
TTTCTTCATCGTCAATCTAC+AGG - chr4.1:18510906-18510925 None:intergenic 35.0%
TTTGCTTAGGACATTAGTGT+TGG + chr4.1:18514055-18514074 MS.gene36472:intron 35.0%
TTTGGAAAAACCGCTATGAT+CGG + chr4.1:18512173-18512192 MS.gene36472:intron 35.0%
! AACATGGCCCATTTTCTATT+TGG + chr4.1:18512960-18512979 MS.gene36472:intron 35.0%
! AAGATATTCAAAGGGTATGG+TGG + chr4.1:18513374-18513393 MS.gene36472:intron 35.0%
! ACAAGATTAGTCAACTCTGA+TGG + chr4.1:18510102-18510121 MS.gene36472:intron 35.0%
! ACATTAGTGTTGGAGAACTT+AGG + chr4.1:18514065-18514084 MS.gene36472:intron 35.0%
! ACCTCTCGAAAGATGATTTT+AGG + chr4.1:18509265-18509284 MS.gene36472:CDS 35.0%
! ATGAAACCATGTTTAGGATG+AGG + chr4.1:18514324-18514343 MS.gene36472:intron 35.0%
! ATTCAGTTTCTTGCGGTTTT+CGG - chr4.1:18512128-18512147 None:intergenic 35.0%
! CAATGCAAAGTTGCTCATTT+TGG + chr4.1:18512905-18512924 MS.gene36472:intron 35.0%
! CATACAAGATATACTGGCTA+TGG + chr4.1:18513617-18513636 MS.gene36472:intron 35.0%
! CCTCTCGAAAGATGATTTTA+GGG + chr4.1:18509266-18509285 MS.gene36472:CDS 35.0%
! GAGAACTGTTTGAGTTATCT+GGG - chr4.1:18511893-18511912 None:intergenic 35.0%
! TGAAACCATGTTTAGGATGA+GGG + chr4.1:18514325-18514344 MS.gene36472:intron 35.0%
! TTGTCCCTCTTTTCTGTTTT+AGG + chr4.1:18513197-18513216 MS.gene36472:intron 35.0%
!! ATGTTTTAAGTAGTCACGCT+TGG - chr4.1:18509775-18509794 None:intergenic 35.0%
!! CAAGTTTTTCAGAACCTTGT+AGG - chr4.1:18509382-18509401 None:intergenic 35.0%
!! GATGCGTTTGGATGTTATTT+TGG + chr4.1:18512155-18512174 MS.gene36472:intron 35.0%
!! TGGCTTTGGTAAAAAAGATG+AGG + chr4.1:18513351-18513370 MS.gene36472:CDS 35.0%
!! TGTGATTGATTTTCCGCAAA+TGG + chr4.1:18510933-18510952 MS.gene36472:CDS 35.0%
!! TTGTATATCTAGGCTTTAGG+TGG - chr4.1:18513915-18513934 None:intergenic 35.0%
!!! AAGGTTTTGGGTATTTGCTT+AGG + chr4.1:18514042-18514061 MS.gene36472:intron 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG - chr4.1:18512096-18512115 None:intergenic 35.0%
!!! CTTAAGCTTGCTTTTTGGTT+TGG + chr4.1:18510548-18510567 MS.gene36472:intron 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG - chr4.1:18512086-18512105 None:intergenic 35.0%
!!! GGTTTTCGGTTTTTTTGGAT+CGG - chr4.1:18512114-18512133 None:intergenic 35.0%
AAGAGTTGAGTAAGGCTTAG+TGG - chr4.1:18510350-18510369 None:intergenic 40.0%
AATTCCTAGGGATAAGACAC+AGG - chr4.1:18512035-18512054 None:intergenic 40.0%
AATTCTCACAAAGACAAGGG+TGG + chr4.1:18514805-18514824 MS.gene36472:CDS 40.0%
ACTCGCTGGATTGTATATCT+AGG - chr4.1:18513925-18513944 None:intergenic 40.0%
ACTGGATGTGAGATTAAGTG+TGG + chr4.1:18514145-18514164 MS.gene36472:intron 40.0%
ACTTCATCCTAGTTTCGTCT+TGG - chr4.1:18513980-18513999 None:intergenic 40.0%
ATTCCTTAACATGTGCCCTT+AGG + chr4.1:18512928-18512947 MS.gene36472:intron 40.0%
CAAATTCTTTAAGCGCAGCA+AGG - chr4.1:18509830-18509849 None:intergenic 40.0%
CAACGTTCAAACCCATTTAC+AGG + chr4.1:18513866-18513885 MS.gene36472:intron 40.0%
CAAGATGTAAAAGCAAGGGA+CGG - chr4.1:18510251-18510270 None:intergenic 40.0%
CAAGTAGCATGAAAAAGGCA+AGG - chr4.1:18512754-18512773 None:intergenic 40.0%
CAGGAATTCTCACAAAGACA+AGG + chr4.1:18514801-18514820 MS.gene36472:CDS 40.0%
CATCGTCAATCTACAGGAAA+CGG - chr4.1:18510900-18510919 None:intergenic 40.0%
CATGTAAAGGCCAGATAACA+AGG - chr4.1:18514652-18514671 None:intergenic 40.0%
CCCTAAAATCATCTTTCGAG+AGG - chr4.1:18509269-18509288 None:intergenic 40.0%
CTGGATGTGAGATTAAGTGT+GGG + chr4.1:18514146-18514165 MS.gene36472:intron 40.0%
CTTGTCTTTGTGAGAATTCC+TGG - chr4.1:18514803-18514822 None:intergenic 40.0%
GAAATCTGATCCGATCATAG+CGG - chr4.1:18512186-18512205 None:intergenic 40.0%
GACATGTTCTTTGCTTGATC+AGG + chr4.1:18509921-18509940 MS.gene36472:intron 40.0%
GCTATGAAGTTACATAGGCT+TGG + chr4.1:18509723-18509742 MS.gene36472:CDS 40.0%
GCTATGATCGGATCAGATTT+CGG + chr4.1:18512185-18512204 MS.gene36472:intron 40.0%
GGAAAAGAGGAGAGATTTGA+AGG + chr4.1:18514361-18514380 MS.gene36472:CDS 40.0%
GTAAAATATGTGGAAGGGAG+TGG - chr4.1:18510592-18510611 None:intergenic 40.0%
GTAAGAGCTTCTTCCTTGTA+TGG + chr4.1:18510984-18511003 MS.gene36472:intron 40.0%
GTTTCTCATGCCCAATTCAA+CGG - chr4.1:18509301-18509320 None:intergenic 40.0%
TCTGCATTAAGGATAGACAC+AGG + chr4.1:18511690-18511709 MS.gene36472:intron 40.0%
TGAAAACAGCGGATCTGAAA+AGG + chr4.1:18514384-18514403 MS.gene36472:CDS 40.0%
TGTTCGTGAATTTCACTGCT+TGG + chr4.1:18511487-18511506 MS.gene36472:intron 40.0%
TTACAGCATTCCTTGTTAGC+GGG - chr4.1:18514519-18514538 None:intergenic 40.0%
TTCAAATGCAAATGAGCAGC+TGG + chr4.1:18514851-18514870 MS.gene36472:CDS 40.0%
TTCCTTAACATGTGCCCTTA+GGG + chr4.1:18512929-18512948 MS.gene36472:intron 40.0%
TTGACGCATGGTCTATGAAT+TGG + chr4.1:18510185-18510204 MS.gene36472:intron 40.0%
TTGCTAAGTACTCTTAGGGA+TGG + chr4.1:18510148-18510167 MS.gene36472:intron 40.0%
! ACTGCTTGGTTTGAGAAGAA+TGG + chr4.1:18511501-18511520 MS.gene36472:intron 40.0%
! CCCTTCCACATATTTTACAC+TGG + chr4.1:18510594-18510613 MS.gene36472:intron 40.0%
! CGATCAAAGTACCTGAAACA+AGG - chr4.1:18511401-18511420 None:intergenic 40.0%
! CTGCTTGGTTTGAGAAGAAT+GGG + chr4.1:18511502-18511521 MS.gene36472:intron 40.0%
! CTTGCGGTTTTCGGTTTTTT+TGG - chr4.1:18512119-18512138 None:intergenic 40.0%
! CTTGCTTTCTAGGCTTTATG+AGG + chr4.1:18514100-18514119 MS.gene36472:intron 40.0%
! GATATACTGGCTATGGGAAA+TGG + chr4.1:18513624-18513643 MS.gene36472:intron 40.0%
! GGAGAACTGTTTGAGTTATC+TGG - chr4.1:18511894-18511913 None:intergenic 40.0%
! GGATATCCAACTTGCTTTCT+AGG + chr4.1:18514090-18514109 MS.gene36472:intron 40.0%
! GTTTGAGTTATCTGGGAAAG+AGG - chr4.1:18511886-18511905 None:intergenic 40.0%
! TAGTGTTGGAGAACTTAGGA+AGG + chr4.1:18514069-18514088 MS.gene36472:intron 40.0%
! TCTGATGGTGTTGGATATTG+CGG + chr4.1:18510117-18510136 MS.gene36472:intron 40.0%
! TGATAGTGAAGATGGTGACT+TGG + chr4.1:18513508-18513527 MS.gene36472:CDS 40.0%
! TTAGTCAACTCTGATGGTGT+TGG + chr4.1:18510108-18510127 MS.gene36472:intron 40.0%
! TTTGAGGTTGCTGATGAAGA+TGG + chr4.1:18509690-18509709 MS.gene36472:CDS 40.0%
!! ATTCTTTTCCAACGCCGATT+TGG - chr4.1:18509530-18509549 None:intergenic 40.0%
!! ATTTGATTTGCAGGAGGAAG+TGG + chr4.1:18514690-18514709 MS.gene36472:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - chr4.1:18512946-18512965 None:intergenic 40.0%
!! TTTGATTTGCAGGAGGAAGT+GGG + chr4.1:18514691-18514710 MS.gene36472:intron 40.0%
!!! CAGTGCTGGTTTTCTAGATA+AGG + chr4.1:18513315-18513334 MS.gene36472:CDS 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG - chr4.1:18512107-18512126 None:intergenic 40.0%
!!! TGGTTCGGTTCGGTTTTAAA+AGG - chr4.1:18512215-18512234 None:intergenic 40.0%
!!! TTTACTTTTGCGGTTCGGTT+TGG - chr4.1:18512235-18512254 None:intergenic 40.0%
AAAGGAAGATGCAAGCGACA+CGG + chr4.1:18514402-18514421 MS.gene36472:CDS 45.0%
AAATATGTGGAAGGGAGTGG+TGG - chr4.1:18510589-18510608 None:intergenic 45.0%
ACATGGATTTCCTGTTCCAG+AGG + chr4.1:18509954-18509973 MS.gene36472:CDS 45.0%
ACCTCAAAACCGATCCAAAC+CGG + chr4.1:18512635-18512654 MS.gene36472:intron 45.0%
ATTATTCGGCTGGCAGAACA+TGG + chr4.1:18510724-18510743 MS.gene36472:CDS 45.0%
ATTCCTTGTTAGCGGGGATA+CGG - chr4.1:18514512-18514531 None:intergenic 45.0%
CAAACATTAGACGGCACAGA+AGG - chr4.1:18511669-18511688 None:intergenic 45.0%
CAATCCAGCGAGTTAGTACA+AGG + chr4.1:18513932-18513951 MS.gene36472:intron 45.0%
CATAACCAAGGTAGGTAAGG+CGG - chr4.1:18509452-18509471 None:intergenic 45.0%
CATGTCCCTCATCCTAAACA+TGG - chr4.1:18514333-18514352 None:intergenic 45.0%
CCTTAGGGCACAAGTTAACA+TGG + chr4.1:18512944-18512963 MS.gene36472:intron 45.0%
CGATTCTAATGAAGGGAGAG+AGG + chr4.1:18513258-18513277 MS.gene36472:CDS 45.0%
GATCAGGCTTTGCAAACACA+TGG + chr4.1:18509937-18509956 MS.gene36472:intron 45.0%
GATGAGGGACATGAAAGTCA+TGG + chr4.1:18514340-18514359 MS.gene36472:CDS 45.0%
GCACTTACAGAGGATAACCT+TGG - chr4.1:18510020-18510039 None:intergenic 45.0%
GGTTTGAGAAGAATGGGAGA+GGG + chr4.1:18511508-18511527 MS.gene36472:intron 45.0%
GTCAGATCTCAAGCATATCC+TGG - chr4.1:18510224-18510243 None:intergenic 45.0%
GTTATCTGGGAAAGAGGAGA+TGG - chr4.1:18511880-18511899 None:intergenic 45.0%
GTTTGAGAAGAATGGGAGAG+GGG + chr4.1:18511509-18511528 MS.gene36472:intron 45.0%
TAATGCTGACAAGTGCACAC+AGG - chr4.1:18510801-18510820 None:intergenic 45.0%
TACAGCATTCCTTGTTAGCG+GGG - chr4.1:18514518-18514537 None:intergenic 45.0%
TAGTCCTGTGTCTTATCCCT+AGG + chr4.1:18512028-18512047 MS.gene36472:intron 45.0%
TCATCCTAGTTTCGTCTTGG+AGG - chr4.1:18513977-18513996 None:intergenic 45.0%
TCCTTAACATGTGCCCTCAA+GGG - chr4.1:18512815-18512834 None:intergenic 45.0%
TCTGCAGTTTATTGAAGGCG+AGG + chr4.1:18513466-18513485 MS.gene36472:intron 45.0%
TCTTCAATAGACAGCAGTGC+TGG + chr4.1:18513301-18513320 MS.gene36472:CDS 45.0%
TGCTATAGCATCAGCTCGTA+GGG + chr4.1:18514759-18514778 MS.gene36472:CDS 45.0%
TGGTTTGAGAAGAATGGGAG+AGG + chr4.1:18511507-18511526 MS.gene36472:intron 45.0%
TGTAAAAGCAAGGGACGGAA+TGG - chr4.1:18510246-18510265 None:intergenic 45.0%
TTCCTTAACATGTGCCCTCA+AGG - chr4.1:18512816-18512835 None:intergenic 45.0%
! AATGCTAACTTGTGCCCTTG+AGG + chr4.1:18512798-18512817 MS.gene36472:intron 45.0%
! ATCGGCGTTGGAAAAGAATC+TGG + chr4.1:18509531-18509550 MS.gene36472:CDS 45.0%
! ATGCTAACTTGTGCCCTTGA+GGG + chr4.1:18512799-18512818 MS.gene36472:intron 45.0%
! CATGTTTGAGACGAGCGATT+CGG - chr4.1:18509353-18509372 None:intergenic 45.0%
! GTAATCATGTCGCTTGTCCA+AGG + chr4.1:18510000-18510019 MS.gene36472:CDS 45.0%
!! AAATCTTGTGCGGTTCGGTT+CGG - chr4.1:18512591-18512610 None:intergenic 45.0%
!! ACGAAAAAGGGCACTTACAG+AGG - chr4.1:18510030-18510049 None:intergenic 45.0%
!! CCATGTTAACTTGTGCCCTA+AGG - chr4.1:18512947-18512966 None:intergenic 45.0%
!! GATAAGGAACTTGCTGCTAG+TGG + chr4.1:18513331-18513350 MS.gene36472:CDS 45.0%
!! GTATCAATTAGGGGTGTTCG+CGG - chr4.1:18512662-18512681 None:intergenic 45.0%
!!! TTTTGCGGTTCGGTTTGGTT+CGG - chr4.1:18512230-18512249 None:intergenic 45.0%
!! TTATATTTCATAATTTAATT+AGG - chr4.1:18510412-18510431 None:intergenic 5.0%
!!! TAATTTCTATTATTTTTATT+AGG + chr4.1:18514430-18514449 MS.gene36472:intron 5.0%
AAGAGGAGATGGAGGAAAGG+AGG - chr4.1:18511869-18511888 None:intergenic 50.0%
AATGAAGGGAGAGAGGAAGC+CGG + chr4.1:18513265-18513284 MS.gene36472:CDS 50.0%
AGAGGAGATGGAGGAAAGGA+GGG - chr4.1:18511868-18511887 None:intergenic 50.0%
ATCGCTCGTCTCAAACATGG+TGG + chr4.1:18509354-18509373 MS.gene36472:CDS 50.0%
ATCTGGGAAAGAGGAGATGG+AGG - chr4.1:18511877-18511896 None:intergenic 50.0%
ATTCGGTCGATGAGTTCAGC+GGG - chr4.1:18509336-18509355 None:intergenic 50.0%
ATTTCCTGTTCCAGAGGCTG+TGG + chr4.1:18509960-18509979 MS.gene36472:CDS 50.0%
CAAACATGGTGGCACCTACA+AGG + chr4.1:18509365-18509384 MS.gene36472:CDS 50.0%
CGAATCGCTCGTCTCAAACA+TGG + chr4.1:18509351-18509370 MS.gene36472:CDS 50.0%
CGATTATGTTCCACAGCCTC+TGG - chr4.1:18509973-18509992 None:intergenic 50.0%
CTCACAAAGACAAGGGTGGT+AGG + chr4.1:18514809-18514828 MS.gene36472:CDS 50.0%
GACGGAAGAAACTTGGATCC+AGG + chr4.1:18514782-18514801 MS.gene36472:CDS 50.0%
GAGTTAGTACAAGGCCTCGA+TGG + chr4.1:18513941-18513960 MS.gene36472:intron 50.0%
GCAGTTTATTGAAGGCGAGG+TGG + chr4.1:18513469-18513488 MS.gene36472:intron 50.0%
GCTATAGCATCAGCTCGTAG+GGG + chr4.1:18514760-18514779 MS.gene36472:CDS 50.0%
GGAAAGAGGAGATGGAGGAA+AGG - chr4.1:18511872-18511891 None:intergenic 50.0%
GGAGTCAGATTGTAAGCCAG+AGG - chr4.1:18510879-18510898 None:intergenic 50.0%
GGCATCAGCAGTTTGCAGAA+AGG - chr4.1:18513775-18513794 None:intergenic 50.0%
GTGCTATAGCATCAGCTCGT+AGG + chr4.1:18514758-18514777 MS.gene36472:CDS 50.0%
GTTCAGCGGGGACAATTTCA+TGG - chr4.1:18509323-18509342 None:intergenic 50.0%
GTTCTCACCGCCGTTGAATT+GGG + chr4.1:18509288-18509307 MS.gene36472:CDS 50.0%
GTTCTGCAAATGCAGCGTTC+AGG + chr4.1:18510651-18510670 MS.gene36472:intron 50.0%
TCCACCTCCAAGACGAAACT+AGG + chr4.1:18513970-18513989 MS.gene36472:intron 50.0%
TCCTAGTTTCGTCTTGGAGG+TGG - chr4.1:18513974-18513993 None:intergenic 50.0%
TCTCATGCCCAATTCAACGG+CGG - chr4.1:18509298-18509317 None:intergenic 50.0%
TGCGACACAGACACCATTTG+CGG - chr4.1:18510949-18510968 None:intergenic 50.0%
TTACCGTATCCCCGCTAACA+AGG + chr4.1:18514506-18514525 MS.gene36472:intron 50.0%
! GATTCGGTCGATGAGTTCAG+CGG - chr4.1:18509337-18509356 None:intergenic 50.0%
! TGCCCTAAGGGCACATGTTA+AGG - chr4.1:18512934-18512953 None:intergenic 50.0%
!! AAAGGTGTCTTCGTCTCCGT+TGG + chr4.1:18509501-18509520 MS.gene36472:CDS 50.0%
!! GAACTTGCTGCTAGTGGCTT+TGG + chr4.1:18513337-18513356 MS.gene36472:CDS 50.0%
!!! TCCGGTTTGGATCGGTTTTG+AGG - chr4.1:18512639-18512658 None:intergenic 50.0%
AATGACACGACGCTCACGTG+AGG - chr4.1:18509608-18509627 None:intergenic 55.0%
ATGACACGACGCTCACGTGA+GGG - chr4.1:18509607-18509626 None:intergenic 55.0%
CGTAGGGGACGGAAGAAACT+TGG + chr4.1:18514775-18514794 MS.gene36472:CDS 55.0%
CTCACGTGAGGGTCATACAC+TGG - chr4.1:18509596-18509615 None:intergenic 55.0%
GGATTCCGCCTTACCTACCT+TGG + chr4.1:18509444-18509463 MS.gene36472:CDS 55.0%
GGTTCTCACCGCCGTTGAAT+TGG + chr4.1:18509287-18509306 MS.gene36472:CDS 55.0%
GTCTCCGTTGGTCGCCAAAT+CGG + chr4.1:18509513-18509532 MS.gene36472:CDS 55.0%
TAGCATCAGCTCGTAGGGGA+CGG + chr4.1:18514764-18514783 MS.gene36472:CDS 55.0%
TTCGGTCGATGAGTTCAGCG+GGG - chr4.1:18509335-18509354 None:intergenic 55.0%
! GAGGCCTTGTACTAACTCGC+TGG - chr4.1:18513939-18513958 None:intergenic 55.0%
! GCCCTTGAGGGCACATGTTA+AGG + chr4.1:18512811-18512830 MS.gene36472:intron 55.0%
!! AACGCCGATTTGGCGACCAA+CGG - chr4.1:18509520-18509539 None:intergenic 55.0%
!! AATTAGGGGTGTTCGCGGTC+CGG - chr4.1:18512657-18512676 None:intergenic 55.0%
!! CGGTTCGGTTTGGTTCGGTT+CGG - chr4.1:18512225-18512244 None:intergenic 55.0%
!! GAGGTGGAAGAGTACCATCG+AGG - chr4.1:18513958-18513977 None:intergenic 55.0%
!! TGTTCCACAGCCTCTGGAAC+AGG - chr4.1:18509967-18509986 None:intergenic 55.0%
!! TTGTGCGGTTCGGTTCGGTT+TGG - chr4.1:18512586-18512605 None:intergenic 55.0%
GTTGGTCGCCAAATCGGCGT+TGG + chr4.1:18509519-18509538 MS.gene36472:CDS 60.0%
!! GTTCGCGGTCCGGTTTGGAT+CGG - chr4.1:18512647-18512666 None:intergenic 60.0%
! GGGGTGTTCGCGGTCCGGTT+TGG - chr4.1:18512652-18512671 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 18509237 18514876 18509237 ID=MS.gene36472
chr4.1 mRNA 18509237 18514876 18509237 ID=MS.gene36472.t1;Parent=MS.gene36472
chr4.1 exon 18509237 18509552 18509237 ID=MS.gene36472.t1.exon1;Parent=MS.gene36472.t1
chr4.1 CDS 18509237 18509552 18509237 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18509685 18509860 18509685 ID=MS.gene36472.t1.exon2;Parent=MS.gene36472.t1
chr4.1 CDS 18509685 18509860 18509685 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18509943 18510031 18509943 ID=MS.gene36472.t1.exon3;Parent=MS.gene36472.t1
chr4.1 CDS 18509943 18510031 18509943 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18510666 18510783 18510666 ID=MS.gene36472.t1.exon4;Parent=MS.gene36472.t1
chr4.1 CDS 18510666 18510783 18510666 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18510910 18510983 18510910 ID=MS.gene36472.t1.exon5;Parent=MS.gene36472.t1
chr4.1 CDS 18510910 18510983 18510910 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18511409 18511456 18511409 ID=MS.gene36472.t1.exon6;Parent=MS.gene36472.t1
chr4.1 CDS 18511409 18511456 18511409 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18513219 18513387 18513219 ID=MS.gene36472.t1.exon7;Parent=MS.gene36472.t1
chr4.1 CDS 18513219 18513387 18513219 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18513473 18513589 18513473 ID=MS.gene36472.t1.exon8;Parent=MS.gene36472.t1
chr4.1 CDS 18513473 18513589 18513473 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18514340 18514423 18514340 ID=MS.gene36472.t1.exon9;Parent=MS.gene36472.t1
chr4.1 CDS 18514340 18514423 18514340 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
chr4.1 exon 18514703 18514876 18514703 ID=MS.gene36472.t1.exon10;Parent=MS.gene36472.t1
chr4.1 CDS 18514703 18514876 18514703 ID=cds.MS.gene36472.t1;Parent=MS.gene36472.t1
Gene Sequence

>MS.gene36472

ATGAAGCTCGACGTAGATGTTTTGAGATACCTCTCGAAAGATGATTTTAGGGTTCTCACCGCCGTTGAATTGGGCATGAGAAACCATGAAATTGTCCCCGCTGAACTCATCGACCGAATCGCTCGTCTCAAACATGGTGGCACCTACAAGGTTCTGAAAAACTTGCTTAAACACAAGCTGCTGCATCATGACTCTACTAAATACGATGGATTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATCAAAACTATGGTCAATAAAGGTGTCTTCGTCTCCGTTGGTCGCCAAATCGGCGTTGGAAAAGAATCTGGTAAGTATTCTGTAACAGACACTTTTGATAGAAGACGTGTCCAGTGTATGACCCTCACGTGAGCGTCGTGTCATTTCAAACTTTTTAGCGTATTAGCGTAATTGATTGTGTTGTTTGTGATTGATTTGCTAGATATATTTGAGGTTGCTGATGAAGATGGAAAAATTATGGCTATGAAGTTACATAGGCTTGGTAGAGTTTCTTTTAGAGCTGTTAAATCCAAGCGTGACTACTTAAAACATCGTAGTAGTTATAATTGGCTCTATTTATCTCGCCTTGCTGCGCTTAAAGAATTTGCTTTCATGAAGGTGCTTTTACTCTCCCTAGCTATGTACTTGAATTGTTACTTTTTTACTTTATTTTCTAGTGACATGTTCTTTGCTTGATCAGGCTTTGCAAACACATGGATTTCCTGTTCCAGAGGCTGTGGAACATAATCGACATTGTGTAATCATGTCGCTTGTCCAAGGTTATCCTCTGTAAGTGCCCTTTTTCGTGTTGTTTCAAACATAAAAGTCGTTTAGGGTCACATTTGTGCTAAATGTATGAACAAGATTAGTCAACTCTGATGGTGTTGGATATTGCGGTTGTATAATTGCTAAGTACTCTTAGGGATGGTATTTGTATAACATTTGACGCATGGTCTATGAATTGGTATTACATTAGTACCAGGATATGCTTGAGATCTGACCATTCCGTCCCTTGCTTTTACATCTTGTTCGTTTAGATAAGGAATGAAGATGAGAAATAACATAGATTTCGGATTGTGGTTATAGTTTGATGTGAAAGACTAACCACTAAGCCTTACTCAACTCTTAATCTTAATTAAATACAACTAATCATGTTAATTACTAATCCTAATTAAATTATGAAATATAATCTAAAATCTCATGAAACATGATCAATCCTAAGAGATTTATAGATATTTTGAATTACTCTAAGGATAGAGTTTAAATATTATGGGATGTTTTCATATATTTTAACAGTCTTTTGTTCTTAAGCTTGCTTTTTGGTTTGGACTTTGTAGTTTGTACCACCACTCCCTTCCACATATTTTACACTGGTTTTGGTGAACAATTGCTTGAATTTGTATGCTTGGTTCTGCAAATGCAGCGTTCAGGTGAAGCAGTTACAAAACCCAGAGACAGTTTTTGAGACAATTGTTGGTATAATTATTCGGCTGGCAGAACATGGTCTCATTCATTGTGATTTCAATGAATTTAACATCATGGTATGCTTTAATAACCTGTGTGCACTTGTCAGCATTATCATTAAATACAACACTACATTTTTTTCATTACATGTCATTTTTTATGGCTTTTACCTCTGGCTTACAATCTGACTCCGTTTCCTGTAGATTGACGATGAAGAAAAAATTACTGTGATTGATTTTCCGCAAATGGTGTCTGTGTCGCACCGTAATGCAAAGATGTAAGAGCTTCTTCCTTGTATGGTATTATGTCCCTTCAAATTCTGTTTTTTTTCCTTTGATTTCATGCTTGTATGAACGCTAACTTTTTCTTCTCATGACAATTCTGAAATGAACCTCATTTTCTATCTTTTGTTTGAATTTTAAATATTGTCCACAGAAATTTAAGATATGATGTCGACGAAAATTTTTGAGTTCAAATATGTCAATAAACTTTTTATTGAGTTTAATTGGTACGTAGTATGTACTGGCACTGTCAGTATAAAATAGTTTTACACATGCATTCAATCATATCTAACTAGTATGTCATTTTGTTATATTAAGTTTCTAAAATATTCTCACAAATACCCAACACATAATATCACTATTATATTTTCAACTAATATATTTTCGTTACGCCTTAACTTATAATCTTTCCTTGTTTCAGGTACTTTGATCGTGATGTTGAATGTATCTTCAAGTTTTTCAGAAAGAGGTTTGTAGTTATTTTGACATTATGTGTTGGTGTTCGTGAATTTCACTGCTTGGTTTGAGAAGAATGGGAGAGGGGTGTTACATTTCAAAATTAAGGAATTTGGAATTGGGGGAGTAAAGTAATGTTAGTTAAGTAGTAATGTTAAGGCCTTACATATCTAGCAGTTGACTTACGACAATTTTCAACTTAATGTTTAATATGCATACATACCTTCTGTGCCGTCTAATGTTTGTTCTGCATTAAGGATAGACACAGGAATATAGGATTATATGTTGACATTTTAAAATTATTTTAATGTTTATTGTTAAATTATTTTCGGACTATACTCTTATTTACATTTGTTAATTCAGTTGATATATTTTAGTTGTATTTTTTTGATGTTATAAATATAAATAAATATTCATAATTCCCTCCTTTCCTCCATCTCCTCTTTCCCAGATAACTCAAACAGTTCTCCCTTTGTTGAGCAATCAATTTTTTGATTTTTGTCCTGTGTCTTGTCCCTTAATTTTTGTCCTGTGATATTTTCTAGAAATAAAAAAAGAAGTGTTTTTTCACTCTTTGATAAATTTAGTCCTGTGTCTTATCCCTAGGAATTCAAACATTGATACTAGGGGTGTTCAAATCCAAACCGATCCAAAATAAAACCGCAAACCGATCCAAAAAAACCGAAAACCGCAAGAAACTGAATATTTTTGGATGCGTTTGGATGTTATTTTGGAAAAACCGCTATGATCGGATCAGATTTCGGATTGCCTTTTAAAACCGAACCGAACCAAACCGAACCGCAAAAGTAAAATTTTAAACTTATTTATTATTTTATTAGTATTATATATTGCATCAATATATTTCTTATTGGTATTTAATCTTATATATTGCATTACTTTAATCTATATTATTAGTACTTCATCTATTTCAAATATAATCAATCATTTTCATTGTGTAATGTTATCTTTTTTAATAAATTTGTGTCATATTTTGTATCAAACCTATTATTTTACTGTGTATGAGTAATATTAATATTAATAAAAAATTTACATGTTGCACTTTGGATATCCAAAAACCGATCCAAATTAAACCGCATATATTTGGATCTGATCGGTTCGGATTTTTTTAACATAATCATCCAAACCGAACCGAACCGCACAAGATTTTTATTTTGGATCGGTTGATTTTTTACCTCAAAACCGATCCAAACCGGACCGCGAACACCCCTAATTGATACAATTTGATACAAATATTTGCAACACCTGTTTTGCATGTTAAGATCTTTGATAGGAGCATACTCTTGTTTCCTTGCCTTTTTCATGCTACTTGATTTGATCCTAATTTTCTATGGCAAATGCTAACTTGTGCCCTTGAGGGCACATGTTAAGGAACTAATTATAGAAGTATACGTATCAAAAGTCGTGCAGTCAACTTCTTAAAAGTTAAATTATCATGTTTTCCAATGCAAAGTTGCTCATTTTGGATTCCTTAACATGTGCCCTTAGGGCACAAGTTAACATGGCCCATTTTCTATTTGGTATCTCTGATGGTTATAAGTTTTGTTTTTTAACTGATATTTTACTTGAAGTGTTGATTTTTATTTTGTCATTCACTTTTAGTACGTACTACTACCATACACACTATTAGTATATTGCATCTCTTATTTTGATTGAATCTTTAATTTATCTTTTGCTTAACTTATTGAAAGATTTTGGGTTTGTCTTTGGCTGCGCAACCAGTTGTCTTGATAATTTGTCCCTCTTTTCTGTTTTAGGTTCAATATGACTTTTCAAGAAAGCATAGATGATAACGACGATTCTAATGAAGGGAGAGAGGAAGCCGGAAAACTCTGTTTTTCTTCAATAGACAGCAGTGCTGGTTTTCTAGATAAGGAACTTGCTGCTAGTGGCTTTGGTAAAAAAGATGAGGAAGATATTCAAAGGGTATGGTGGTTTTTCTGCCTTTTCTTAGTTATAATGCATTGATTGTGAAAGATTTTACCTCAAATATCTTCAAATTTATCTGCAGTTTATTGAAGGCGAGGTGGAGAGTGATACAAATTCTGATAGTGAAGATGGTGACTTGGTGAGAAATCTGAATGAAGCAGACGATTTAAATGTTGATTCTTTACATTTGTCAGAGCAGGTAGTATATCCATTAGCTTTTTATTGTCATACAAGATATACTGGCTATGGGAAATGGTGTGTGCTAGTTCATTTGTTTTATTTTGATGAATTTAGTTAGGAGGAGTGAAGTACAAGTAAAGAAATATAAAACAATAGTGGTTCAACTAGATAAAACAAATAGACTCATCTGTTAGGGGATTGCCTTTCTGCAAACTGCTGATGCCCTTGATTCTTCTAATATAACACTGCATAACTTTTTTTGAACGGGAAAATTAATTAACTACAAAAGGTAGTTCAACGTTCAAACCCATTTACAGGACAACAAACATAAAACAACGGTACCACCTAAAGCCTAGATATACAATCCAGCGAGTTAGTACAAGGCCTCGATGGTACTCTTCCACCTCCAAGACGAAACTAGGATGAAGTCAAAAAGCTCATCCCTATGAATATGACACGGCATAATTAAAGAAGGTTTTGGGTATTTGCTTAGGACATTAGTGTTGGAGAACTTAGGAAGGATATCCAACTTGCTTTCTAGGCTTTATGAGGATGAATTTAAAGTTTTCATTGCACTGGATGTGAGATTAAGTGTGGGAACTTCTGTGATATTCTAAGTGAACTGTGGGAAGTAAATTTGAACGTCCTGTAGTTAATCTAAGATCTGTTTTGTTCACTAATTGACTATTTTTTTCAGCTTATTTCACTAGTTTTGCAATTCCGTATATTACAATTCTAATTGAAAGATTGTTAATGAAACCATGTTTAGGATGAGGGACATGAAAGTCATGGAAAAGAGGAGAGATTTGAAGGTGAAAACAGCGGATCTGAAAAGGAAGATGCAAGCGACACGGTAAGCTAATTTCTATTATTTTTATTAGGTGATTATCTCAGTTTTTTGCTTTTCTTTTTCTTCATGATGAATTTTTTGGGTATTACCGTATCCCCGCTAACAAGGAATGCTGTAAAAATCCCAAGATGAAAATGCAATTGGATTTGATTTTATTTTCTGTCAAGATCGAATGAATGAATTTTTCTTGAAAGTAAACTAATATATTTCTATTCTAGTTTATAGAATCCTTGTTATCTGGCCTTTACATGAAAACCATAATGGTATTAATTTGATTTGCAGGAGGAAGTGGGAATTGAAGCTGAACTCACAAAGAGCTTGAGTAAGCAAAGACAAAGTGCTATAGCATCAGCTCGTAGGGGACGGAAGAAACTTGGATCCAGGAATTCTCACAAAGACAAGGGTGGTAGGTCATCTCAAAATGCTAAGGTTCAAATGCAAATGAGCAGCTGGTGA

Protein sequence

>MS.gene36472.t1

MKLDVDVLRYLSKDDFRVLTAVELGMRNHEIVPAELIDRIARLKHGGTYKVLKNLLKHKLLHHDSTKYDGFRLTYLGYDFLAIKTMVNKGVFVSVGRQIGVGKESDIFEVADEDGKIMAMKLHRLGRVSFRAVKSKRDYLKHRSSYNWLYLSRLAALKEFAFMKALQTHGFPVPEAVEHNRHCVIMSLVQGYPLVQVKQLQNPETVFETIVGIIIRLAEHGLIHCDFNEFNIMIDDEEKITVIDFPQMVSVSHRNAKMYFDRDVECIFKFFRKRFNMTFQESIDDNDDSNEGREEAGKLCFSSIDSSAGFLDKELAASGFGKKDEEDIQRFIEGEVESDTNSDSEDGDLVRNLNEADDLNVDSLHLSEQDEGHESHGKEERFEGENSGSEKEDASDTEEVGIEAELTKSLSKQRQSAIASARRGRKKLGSRNSHKDKGGRSSQNAKVQMQMSSW