Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030823.t1 | XP_013457341.1 | 77.8 | 464 | 63 | 6 | 1 | 428 | 1 | 460 | 1.30E-182 | 649.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030823.t1 | Q54T05 | 48.6 | 333 | 116 | 6 | 1 | 299 | 1 | 312 | 1.3e-74 | 282.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030823.t1 | A0A072UP04 | 77.8 | 464 | 63 | 6 | 1 | 428 | 1 | 460 | 9.0e-183 | 649.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030823.t1 | MTR_4g094615 | 79.095 | 464 | 57 | 6 | 1 | 428 | 1 | 460 | 0.0 | 682 |
| MS.gene030823.t1 | MTR_4g094615 | 78.552 | 373 | 42 | 4 | 1 | 339 | 1 | 369 | 0.0 | 540 |
| MS.gene030823.t1 | MTR_4g094615 | 78.552 | 373 | 42 | 4 | 1 | 339 | 1 | 369 | 0.0 | 538 |
| MS.gene030823.t1 | MTR_8g090145 | 67.453 | 212 | 50 | 6 | 254 | 461 | 24 | 220 | 1.33e-67 | 216 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030823.t1 | AT3G51270 | 55.372 | 484 | 137 | 13 | 1 | 428 | 1 | 461 | 2.72e-146 | 426 |
| MS.gene030823.t1 | AT3G51270 | 55.372 | 484 | 137 | 13 | 1 | 428 | 1 | 461 | 2.72e-146 | 426 |
| MS.gene030823.t1 | AT3G51270 | 55.372 | 484 | 137 | 13 | 1 | 428 | 1 | 461 | 2.72e-146 | 426 |
| MS.gene030823.t1 | AT3G51270 | 53.564 | 491 | 132 | 15 | 1 | 428 | 1 | 458 | 5.92e-136 | 400 |
Find 79 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATCAAAGTAGTTATAAT+TGG | 0.238386 | 4.2:+11359980 | MS.gene030823:CDS |
| GAGAACCTTAAAATCATCTT+TGG | 0.281968 | 4.2:-11359430 | None:intergenic |
| CGGTTCACAGCCTCCGGAAC+TGG | 0.302352 | 4.2:-11360161 | None:intergenic |
| GGTTCTCTCCGCGGTTGAAT+GGG | 0.311670 | 4.2:+11359446 | MS.gene030823:CDS |
| CTTCGAAACTTCATCTGGTT+TGG | 0.312399 | 4.2:+11364424 | MS.gene030823:CDS |
| TTAAATCGTCTGCTTCATTC+AGG | 0.317069 | 4.2:-11363244 | None:intergenic |
| AGGTTCTCTCCGCGGTTGAA+TGG | 0.322443 | 4.2:+11359445 | MS.gene030823:CDS |
| CAATTATCGGTATAATTATT+CGG | 0.330963 | 4.2:+11361092 | MS.gene030823:CDS |
| AGGACATGAAAGTCATAAAA+AGG | 0.334535 | 4.2:+11363494 | MS.gene030823:CDS |
| GATAACGACGATTCTGATAA+AGG | 0.348942 | 4.2:+11362940 | MS.gene030823:CDS |
| TGTTGATTCTTTGCATTTGT+CGG | 0.381133 | 4.2:+11363268 | MS.gene030823:CDS |
| TAAGCTTTGTTTAGGGCCTT+AGG | 0.396913 | 4.2:-11364447 | None:intergenic |
| ATCTATCTGCAGTTTATTGA+AGG | 0.411095 | 4.2:+11363167 | MS.gene030823:intron |
| TGATTACACAATGTCGATTA+CGG | 0.414472 | 4.2:-11360181 | None:intergenic |
| CAAACATGGCTTCCCAGTTC+CGG | 0.424669 | 4.2:+11360148 | MS.gene030823:CDS |
| GTCATTTCTTCGTTCACAAA+TGG | 0.428859 | 4.2:+11361240 | MS.gene030823:intron |
| TGTTCCTTCGAAACTTCATC+TGG | 0.430957 | 4.2:+11364419 | MS.gene030823:CDS |
| ACTTCATCTGGTTTGGCCTA+AGG | 0.433351 | 4.2:+11364431 | MS.gene030823:CDS |
| ATCGGTGTTGGAAAAGAATC+TGG | 0.439040 | 4.2:+11359690 | MS.gene030823:CDS |
| TGCCATAGCATCAGCTCGTA+AGG | 0.442859 | 4.2:+11363890 | MS.gene030823:CDS |
| CTAGCTATGAAGTTACATAT+AGG | 0.446255 | 4.2:+11359908 | MS.gene030823:intron |
| GTTCTGCAAATGCAGCGTTC+AGG | 0.447538 | 4.2:+11361033 | MS.gene030823:intron |
| AAAGGTGTCTTTGTTTCTGT+TGG | 0.455644 | 4.2:+11359660 | MS.gene030823:CDS |
| CGAAGGAACAGTTCAACACT+TGG | 0.465450 | 4.2:-11364406 | None:intergenic |
| GGCTTTCGCCTCACCTACCT+TGG | 0.475372 | 4.2:+11359603 | MS.gene030823:CDS |
| TATCGGTATAATTATTCGGC+TGG | 0.483287 | 4.2:+11361096 | MS.gene030823:CDS |
| CTCAAATGCAAATGAGCAGC+TGG | 0.484860 | 4.2:+11363982 | MS.gene030823:CDS |
| TTCTTTGCATTTGTCGGACG+AGG | 0.486862 | 4.2:+11363274 | MS.gene030823:CDS |
| GTTTCTGTTGGTCGCCAGAT+CGG | 0.488007 | 4.2:+11359672 | MS.gene030823:CDS |
| GTAATCATGTCACTTGTTCA+AGG | 0.489787 | 4.2:+11360197 | MS.gene030823:CDS |
| GTTGGTCGCCAGATCGGTGT+TGG | 0.494100 | 4.2:+11359678 | MS.gene030823:CDS |
| TAAAGAATTTGCTTTCATGA+AGG | 0.495198 | 4.2:+11360035 | MS.gene030823:CDS |
| ATAAATTCTGATAGGGAAGA+TGG | 0.495943 | 4.2:+11363206 | MS.gene030823:CDS |
| GATAAAGGAAGAGACGAAGC+TGG | 0.501108 | 4.2:+11362955 | MS.gene030823:CDS |
| CGATTACGGTTCACAGCCTC+CGG | 0.503311 | 4.2:-11360167 | None:intergenic |
| TCCCTTACGAGCTGATGCTA+TGG | 0.510097 | 4.2:-11363892 | None:intergenic |
| CATGACTCTTCTAAATATGA+TGG | 0.511755 | 4.2:+11359582 | MS.gene030823:CDS |
| TGAAAACAGCGGATCTGAAA+AGG | 0.514234 | 4.2:+11363533 | MS.gene030823:CDS |
| GGAAAACAATGATAATGCAG+TGG | 0.525649 | 4.2:+11363821 | MS.gene030823:CDS |
| AGTGTGATATAAATTCTGAT+AGG | 0.525674 | 4.2:+11363198 | MS.gene030823:CDS |
| TAGGTCATCTCACAATTCTA+AGG | 0.526345 | 4.2:+11363959 | MS.gene030823:CDS |
| GAGCAGGCTTTGCACAAACA+TGG | 0.532199 | 4.2:+11360134 | MS.gene030823:intron |
| GCAGTTTATTGAAGGTGAGA+TGG | 0.533264 | 4.2:+11363175 | MS.gene030823:intron |
| CAAGCATGGTGGCACCTACA+AGG | 0.534773 | 4.2:+11359524 | MS.gene030823:CDS |
| CATGCTTGAGACAAGCGATT+CGG | 0.536427 | 4.2:-11359509 | None:intergenic |
| TATGAAGTTACATATAGGCT+TGG | 0.545659 | 4.2:+11359913 | MS.gene030823:intron |
| ATTCGGACAATGAGTTCAGC+AGG | 0.548681 | 4.2:-11359492 | None:intergenic |
| GTGTGATATAAATTCTGATA+GGG | 0.552531 | 4.2:+11363199 | MS.gene030823:CDS |
| GAGAAAATCGTAACCAAGGT+AGG | 0.552792 | 4.2:-11359616 | None:intergenic |
| TTCTTCGAGTTTAATACTCG+AGG | 0.553896 | 4.2:+11364345 | MS.gene030823:CDS |
| GATACAGAACTTGCTTCTAG+TGG | 0.559227 | 4.2:+11363021 | MS.gene030823:CDS |
| TCTTCAATAGACATTAGCAC+TGG | 0.564830 | 4.2:+11362991 | MS.gene030823:CDS |
| GGTTCACAGCCTCCGGAACT+GGG | 0.574058 | 4.2:-11360160 | None:intergenic |
| AAAGACACCTTTGTTAAACA+TGG | 0.576028 | 4.2:-11359649 | None:intergenic |
| GAAAACAATGATAATGCAGT+GGG | 0.577064 | 4.2:+11363822 | MS.gene030823:CDS |
| CAGGTACTTTGATCGTGATG+TGG | 0.577248 | 4.2:+11361915 | MS.gene030823:intron |
| GTTCTCTCCGCGGTTGAATG+GGG | 0.577524 | 4.2:+11359447 | MS.gene030823:CDS |
| CTTTAAGTGCAGCAACTGCA+AGG | 0.583527 | 4.2:-11360017 | None:intergenic |
| TGAAACCATGTTTAGGACGA+AGG | 0.585288 | 4.2:+11363474 | MS.gene030823:intron |
| ATTATTCGGCTGGCAGAACA+TGG | 0.588090 | 4.2:+11361106 | MS.gene030823:CDS |
| CATCATATTTAGAAGAGTCA+TGG | 0.590479 | 4.2:-11359581 | None:intergenic |
| GTTCAGCAGGTACAATGTCA+TGG | 0.595227 | 4.2:-11359479 | None:intergenic |
| AAGATGAGGAAGATATTCAG+AGG | 0.596089 | 4.2:+11363055 | MS.gene030823:CDS |
| TAGCATCAGCTCGTAAGGGA+AGG | 0.607120 | 4.2:+11363895 | MS.gene030823:CDS |
| CCTTAAAATCATCTTTGGAG+AGG | 0.613706 | 4.2:-11359425 | None:intergenic |
| CGAATCGCTTGTCTCAAGCA+TGG | 0.616715 | 4.2:+11359510 | MS.gene030823:CDS |
| ATCAAAACCATGTTTAACAA+AGG | 0.619492 | 4.2:+11359642 | MS.gene030823:CDS |
| AGATGAGGAAGATATTCAGA+GGG | 0.621735 | 4.2:+11363056 | MS.gene030823:CDS |
| CAAACCAGATGAAGTTTCGA+AGG | 0.625279 | 4.2:-11364423 | None:intergenic |
| GCCATAGCATCAGCTCGTAA+GGG | 0.630512 | 4.2:+11363891 | MS.gene030823:CDS |
| ACATGGCTTCCCAGTTCCGG+AGG | 0.633971 | 4.2:+11360151 | MS.gene030823:CDS |
| AATCGTAACCAAGGTAGGTG+AGG | 0.635562 | 4.2:-11359611 | None:intergenic |
| CAAACAGCTTGAGTAAGCAA+AGG | 0.642212 | 4.2:+11363862 | MS.gene030823:CDS |
| AAACAGCGGATCTGAAAAGG+AGG | 0.665431 | 4.2:+11363536 | MS.gene030823:CDS |
| TGAAAAGGAGGCAAACAACA+CGG | 0.675952 | 4.2:+11363548 | MS.gene030823:CDS |
| TGGCGAGAAAATCGTAACCA+AGG | 0.682936 | 4.2:-11359620 | None:intergenic |
| TCTCATGCCCCATTCAACCG+CGG | 0.686452 | 4.2:-11359454 | None:intergenic |
| ATCGCTTGTCTCAAGCATGG+TGG | 0.696807 | 4.2:+11359513 | MS.gene030823:CDS |
| TTTGAAGCAGGTGAAAACAG+CGG | 0.730668 | 4.2:+11363522 | MS.gene030823:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAACAGAATTCAAA+GGG | - | chr4.2:11361325-11361344 | None:intergenic | 15.0% |
| !! | GAAATATGTATATTATTCAA+TGG | + | chr4.2:11362271-11362290 | MS.gene030823:intron | 15.0% |
| !!! | AAAATTCTATCGATTTTATT+AGG | + | chr4.2:11363577-11363596 | MS.gene030823:intron | 15.0% |
| !!! | ATAATATAGATTTTGAATTG+TGG | + | chr4.2:11360705-11360724 | MS.gene030823:intron | 15.0% |
| !!! | ATCTAAAACTAAACAATATA+GGG | - | chr4.2:11360666-11360685 | None:intergenic | 15.0% |
| !!! | TATCTAAAACTAAACAATAT+AGG | - | chr4.2:11360667-11360686 | None:intergenic | 15.0% |
| !!! | TTTCTTTTATGATTATATTG+TGG | + | chr4.2:11360534-11360553 | MS.gene030823:intron | 15.0% |
| !! | AACATCAAAGTAGTTATAAT+TGG | + | chr4.2:11359980-11359999 | MS.gene030823:CDS | 20.0% |
| !! | AAGTTCAAATGAAAATACAA+TGG | + | chr4.2:11363663-11363682 | MS.gene030823:intron | 20.0% |
| !! | AATAACTATTACTATTGAGT+AGG | - | chr4.2:11362381-11362400 | None:intergenic | 20.0% |
| !! | AATTCGTAGTAGAATATAAA+AGG | - | chr4.2:11361627-11361646 | None:intergenic | 20.0% |
| !! | AGTTCAAATGAAAATACAAT+GGG | + | chr4.2:11363664-11363683 | MS.gene030823:intron | 20.0% |
| !! | ATTGAAACAAAATGAAAGAA+GGG | - | chr4.2:11360239-11360258 | None:intergenic | 20.0% |
| !! | CAAATGTTATACAATTATGA+CGG | - | chr4.2:11360378-11360397 | None:intergenic | 20.0% |
| !! | CAATTATCGGTATAATTATT+CGG | + | chr4.2:11361092-11361111 | MS.gene030823:CDS | 20.0% |
| !! | CATTTACTCAAAATTATTAG+TGG | + | chr4.2:11359808-11359827 | MS.gene030823:intron | 20.0% |
| !! | GAAAAATAAACAGAATTCAA+AGG | - | chr4.2:11361326-11361345 | None:intergenic | 20.0% |
| !! | TACGCATATTAAATAAAAAG+AGG | - | chr4.2:11362750-11362769 | None:intergenic | 20.0% |
| !! | TGATATTTCAATACTAATTG+TGG | + | chr4.2:11359863-11359882 | MS.gene030823:intron | 20.0% |
| !! | TTTCAATGAATTTAACATCA+TGG | + | chr4.2:11361143-11361162 | MS.gene030823:intron | 20.0% |
| !!! | ATAGTTTTATACCACAAAAA+TGG | - | chr4.2:11361595-11361614 | None:intergenic | 20.0% |
| !!! | CTTAACTTATTGAAAGATTT+TGG | + | chr4.2:11362826-11362845 | MS.gene030823:intron | 20.0% |
| !!! | GATAATTTAGTTCTAATAGA+TGG | - | chr4.2:11364082-11364101 | None:intergenic | 20.0% |
| !!! | GATTTCATTTATTTTCACTA+CGG | - | chr4.2:11361739-11361758 | None:intergenic | 20.0% |
| !!! | TAGTTTTATACCACAAAAAT+GGG | - | chr4.2:11361594-11361613 | None:intergenic | 20.0% |
| !!! | TTATTATTTTTCCTTGTTTC+AGG | + | chr4.2:11361896-11361915 | MS.gene030823:intron | 20.0% |
| ! | AAAATGGGAAGATAAATCTA+TGG | - | chr4.2:11361579-11361598 | None:intergenic | 25.0% |
| ! | AATATAATTATTCTCCCTAC+AGG | - | chr4.2:11364186-11364205 | None:intergenic | 25.0% |
| ! | AGTGTGATATAAATTCTGAT+AGG | + | chr4.2:11363198-11363217 | MS.gene030823:CDS | 25.0% |
| ! | ATCAAAACCATGTTTAACAA+AGG | + | chr4.2:11359642-11359661 | MS.gene030823:CDS | 25.0% |
| ! | ATTGCTTGAATTTGTATACT+TGG | + | chr4.2:11361011-11361030 | MS.gene030823:intron | 25.0% |
| ! | CAAATCAAATTACACCATTA+TGG | - | chr4.2:11363796-11363815 | None:intergenic | 25.0% |
| ! | CATATAAAGGCTAGATAAAA+AGG | - | chr4.2:11363769-11363788 | None:intergenic | 25.0% |
| ! | CCTTTATATGAAAACCATAA+TGG | + | chr4.2:11363779-11363798 | MS.gene030823:intron | 25.0% |
| ! | CTAGAAAATACTGAATGTAT+AGG | + | chr4.2:11364044-11364063 | MS.gene030823:intron | 25.0% |
| ! | GAAACAAAATATAGCAAATG+AGG | - | chr4.2:11361406-11361425 | None:intergenic | 25.0% |
| ! | GATTGAAACAAAATGAAAGA+AGG | - | chr4.2:11360240-11360259 | None:intergenic | 25.0% |
| ! | GCAAGAATGACAAAATATAT+AGG | - | chr4.2:11364233-11364252 | None:intergenic | 25.0% |
| ! | GGAAAAATAATAAGCAGTTA+AGG | - | chr4.2:11361889-11361908 | None:intergenic | 25.0% |
| ! | GTATAAGATCTATATGTCAT+TGG | + | chr4.2:11361480-11361499 | MS.gene030823:intron | 25.0% |
| ! | GTGTGATATAAATTCTGATA+GGG | + | chr4.2:11363199-11363218 | MS.gene030823:CDS | 25.0% |
| ! | TCATATTTAACATATGACTG+TGG | + | chr4.2:11362037-11362056 | MS.gene030823:intron | 25.0% |
| ! | TGTAACATTTCCATTACTAT+TGG | - | chr4.2:11361773-11361792 | None:intergenic | 25.0% |
| ! | TTAAAGCTTACCAATAGTAA+TGG | + | chr4.2:11361760-11361779 | MS.gene030823:intron | 25.0% |
| ! | TTCAATCATAAAAGTCGTTT+AGG | + | chr4.2:11360253-11360272 | MS.gene030823:intron | 25.0% |
| ! | TTGTTAATGAAACCATGTTT+AGG | + | chr4.2:11363467-11363486 | MS.gene030823:intron | 25.0% |
| !! | AACATTTCAAGTATATAGCA+AGG | - | chr4.2:11360074-11360093 | None:intergenic | 25.0% |
| !! | ACATTTCAAGTATATAGCAA+GGG | - | chr4.2:11360073-11360092 | None:intergenic | 25.0% |
| !! | CCATTATGGTTTTCATATAA+AGG | - | chr4.2:11363782-11363801 | None:intergenic | 25.0% |
| !! | CTTTTATGATTATATTGTGG+TGG | + | chr4.2:11360537-11360556 | MS.gene030823:intron | 25.0% |
| !! | GTATTTTCATTTGAACTTCT+AGG | - | chr4.2:11363661-11363680 | None:intergenic | 25.0% |
| !! | TAAAGAATTTGCTTTCATGA+AGG | + | chr4.2:11360035-11360054 | MS.gene030823:CDS | 25.0% |
| !! | TAGATTTTGAATTGTGGTTA+TGG | + | chr4.2:11360711-11360730 | MS.gene030823:intron | 25.0% |
| !!! | ACAGTTTTTGAGACAATTAT+CGG | + | chr4.2:11361079-11361098 | MS.gene030823:CDS | 25.0% |
| !!! | ACTAGTTCTGAAAAACAAAA+AGG | - | chr4.2:11360597-11360616 | None:intergenic | 25.0% |
| !!! | AGATGACTTTTTCTCTAATA+AGG | + | chr4.2:11363367-11363386 | MS.gene030823:intron | 25.0% |
| !!! | ATAACATTTGATTTGATCTG+TGG | + | chr4.2:11360388-11360407 | MS.gene030823:intron | 25.0% |
| !!! | ATGCCACAATTTTTAATTCT+AGG | + | chr4.2:11360570-11360589 | MS.gene030823:intron | 25.0% |
| !!! | TCTTTAAGTTTTTCAGAAAG+AGG | + | chr4.2:11361944-11361963 | MS.gene030823:CDS | 25.0% |
| !!! | TGTTTAGTTTTAGATAACGA+AGG | + | chr4.2:11360671-11360690 | MS.gene030823:intron | 25.0% |
| !!! | TTTGTTAAACATGGTTTTGA+TGG | - | chr4.2:11359643-11359662 | None:intergenic | 25.0% |
| AAAGACACCTTTGTTAAACA+TGG | - | chr4.2:11359652-11359671 | None:intergenic | 30.0% | |
| AATGATCATCATGTCAATGT+AGG | - | chr4.2:11359758-11359777 | None:intergenic | 30.0% | |
| AGAGAAAAAGTCATCTCTAT+TGG | - | chr4.2:11363363-11363382 | None:intergenic | 30.0% | |
| AGGAATTCTCAAAAAGACAA+GGG | + | chr4.2:11363933-11363952 | MS.gene030823:CDS | 30.0% | |
| AGGACATGAAAGTCATAAAA+AGG | + | chr4.2:11363494-11363513 | MS.gene030823:CDS | 30.0% | |
| AGTAGTATGTCTTAACTGTA+TGG | + | chr4.2:11361792-11361811 | MS.gene030823:intron | 30.0% | |
| AGTGTAAAATATGTGGAAGT+GGG | - | chr4.2:11360977-11360996 | None:intergenic | 30.0% | |
| ATAAATTCTGATAGGGAAGA+TGG | + | chr4.2:11363206-11363225 | MS.gene030823:CDS | 30.0% | |
| ATCTATCTGCAGTTTATTGA+AGG | + | chr4.2:11363167-11363186 | MS.gene030823:intron | 30.0% | |
| ATGAACACAATTAGTCAACT+GGG | + | chr4.2:11360296-11360315 | MS.gene030823:intron | 30.0% | |
| ATGTAAAAGCAAGGATCAAA+TGG | - | chr4.2:11360450-11360469 | None:intergenic | 30.0% | |
| ATTGTTGTGTACACAATCAT+TGG | - | chr4.2:11362724-11362743 | None:intergenic | 30.0% | |
| CATCATATTTAGAAGAGTCA+TGG | - | chr4.2:11359584-11359603 | None:intergenic | 30.0% | |
| CATGACTCTTCTAAATATGA+TGG | + | chr4.2:11359582-11359601 | MS.gene030823:CDS | 30.0% | |
| CTAGCTATGAAGTTACATAT+AGG | + | chr4.2:11359908-11359927 | MS.gene030823:intron | 30.0% | |
| CTATTACTATTGAGTAGGTT+AGG | - | chr4.2:11362376-11362395 | None:intergenic | 30.0% | |
| CTGTTTGTGATTTCTATCAA+TGG | - | chr4.2:11362245-11362264 | None:intergenic | 30.0% | |
| CTTAACTGTATGGTATCAAT+AGG | + | chr4.2:11361802-11361821 | MS.gene030823:intron | 30.0% | |
| GAACATCTTGAAATCAAAGA+TGG | - | chr4.2:11361845-11361864 | None:intergenic | 30.0% | |
| GAGAACCTTAAAATCATCTT+TGG | - | chr4.2:11359433-11359452 | None:intergenic | 30.0% | |
| GATAAATGTTTCACGATTGA+CGG | - | chr4.2:11363116-11363135 | None:intergenic | 30.0% | |
| GGACCTAGAATTAAAAATTG+TGG | - | chr4.2:11360576-11360595 | None:intergenic | 30.0% | |
| GTTAGTGCTTTGTAGAATAT+CGG | + | chr4.2:11359840-11359859 | MS.gene030823:intron | 30.0% | |
| GTTGTCATAAAAGAGATACA+GGG | + | chr4.2:11363317-11363336 | MS.gene030823:intron | 30.0% | |
| TACAGCATTCCTTGTTAATA+AGG | - | chr4.2:11363633-11363652 | None:intergenic | 30.0% | |
| TACTGAATGTATAGGTTCAA+CGG | + | chr4.2:11364052-11364071 | MS.gene030823:intron | 30.0% | |
| TAGGAATTCTCAAAAAGACA+AGG | + | chr4.2:11363932-11363951 | MS.gene030823:CDS | 30.0% | |
| TATATTAAAACATGCAGCTG+AGG | - | chr4.2:11359726-11359745 | None:intergenic | 30.0% | |
| TATGAAGTTACATATAGGCT+TGG | + | chr4.2:11359913-11359932 | MS.gene030823:intron | 30.0% | |
| TGTTGTCATAAAAGAGATAC+AGG | + | chr4.2:11363316-11363335 | MS.gene030823:intron | 30.0% | |
| TTCAAGCAATTGTTTACCAA+AGG | - | chr4.2:11361001-11361020 | None:intergenic | 30.0% | |
| TTCATTTCAGAATTGTCATG+AGG | - | chr4.2:11361383-11361402 | None:intergenic | 30.0% | |
| TTGTTGTGTACACAATCATT+GGG | - | chr4.2:11362723-11362742 | None:intergenic | 30.0% | |
| TTTATGACAACAAAAGCTGA+TGG | - | chr4.2:11363308-11363327 | None:intergenic | 30.0% | |
| ! | ATTTTCAGAGATGATGCATA+GGG | - | chr4.2:11360498-11360517 | None:intergenic | 30.0% |
| ! | GAAAACAATGATAATGCAGT+GGG | + | chr4.2:11363822-11363841 | MS.gene030823:CDS | 30.0% |
| ! | TAAGTCTTTTGTTCTTAAGC+TGG | + | chr4.2:11360914-11360933 | MS.gene030823:intron | 30.0% |
| ! | TATTTTCAGAGATGATGCAT+AGG | - | chr4.2:11360499-11360518 | None:intergenic | 30.0% |
| ! | TGATTACACAATGTCGATTA+CGG | - | chr4.2:11360184-11360203 | None:intergenic | 30.0% |
| ! | TTTCTAGAAGTCAATCACAT+TGG | - | chr4.2:11364031-11364050 | None:intergenic | 30.0% |
| !! | AATGGTGTAATTTGATTTGC+AGG | + | chr4.2:11363797-11363816 | MS.gene030823:intron | 30.0% |
| !! | AGTTAGCAAAGATAGTTTTG+TGG | - | chr4.2:11360634-11360653 | None:intergenic | 30.0% |
| !! | CAAGTTTTTCAAAACCTTGT+AGG | - | chr4.2:11359541-11359560 | None:intergenic | 30.0% |
| !! | GATTTATCTTCCCATTTTTG+TGG | + | chr4.2:11361581-11361600 | MS.gene030823:intron | 30.0% |
| !! | TGGCTTTAGTAAAAAAGATG+AGG | + | chr4.2:11363041-11363060 | MS.gene030823:CDS | 30.0% |
| !! | TGTTGATTCTTTGCATTTGT+CGG | + | chr4.2:11363268-11363287 | MS.gene030823:CDS | 30.0% |
| !! | TTTATTTTCACTACGGCATA+CGG | - | chr4.2:11361732-11361751 | None:intergenic | 30.0% |
| AAGATGAGGAAGATATTCAG+AGG | + | chr4.2:11363055-11363074 | MS.gene030823:CDS | 35.0% | |
| AATTCTCAAAAAGACAAGGG+TGG | + | chr4.2:11363936-11363955 | MS.gene030823:CDS | 35.0% | |
| AATTGTGGCATTTGTGATGA+TGG | + | chr4.2:11359878-11359897 | MS.gene030823:intron | 35.0% | |
| AGATGAGGAAGATATTCAGA+GGG | + | chr4.2:11363056-11363075 | MS.gene030823:CDS | 35.0% | |
| AGCATTCCTTGTTAATAAGG+AGG | - | chr4.2:11363630-11363649 | None:intergenic | 35.0% | |
| AGCTCTTTACTTGAAGGATA+AGG | - | chr4.2:11362212-11362231 | None:intergenic | 35.0% | |
| AGGTTTACACAAGAAGAAAG+AGG | - | chr4.2:11362672-11362691 | None:intergenic | 35.0% | |
| ATGAACGAGATGTAAAAGCA+AGG | - | chr4.2:11360459-11360478 | None:intergenic | 35.0% | |
| ATTCCTTGTTAATAAGGAGG+AGG | - | chr4.2:11363627-11363646 | None:intergenic | 35.0% | |
| ATTGTCTCAAAAACTGTCTC+TGG | - | chr4.2:11361076-11361095 | None:intergenic | 35.0% | |
| CAAAGGCAGTGTAAAATATG+TGG | - | chr4.2:11360984-11361003 | None:intergenic | 35.0% | |
| CAGTGTAAAATATGTGGAAG+TGG | - | chr4.2:11360978-11360997 | None:intergenic | 35.0% | |
| CATAGAAGCTCTACAATGAA+GGG | + | chr4.2:11362304-11362323 | MS.gene030823:intron | 35.0% | |
| CATATGTATAGACTGCACTT+CGG | + | chr4.2:11364117-11364136 | MS.gene030823:intron | 35.0% | |
| CATGAACACAATTAGTCAAC+TGG | + | chr4.2:11360295-11360314 | MS.gene030823:intron | 35.0% | |
| GAAGGAAAAAACTTGCATCT+AGG | + | chr4.2:11363913-11363932 | MS.gene030823:CDS | 35.0% | |
| GAGTTTGATGCATGATATCA+AGG | + | chr4.2:11362149-11362168 | MS.gene030823:intron | 35.0% | |
| GATAACGACGATTCTGATAA+AGG | + | chr4.2:11362940-11362959 | MS.gene030823:CDS | 35.0% | |
| GCTCTTTACTTGAAGGATAA+GGG | - | chr4.2:11362211-11362230 | None:intergenic | 35.0% | |
| GGTTTACACAAGAAGAAAGA+GGG | - | chr4.2:11362671-11362690 | None:intergenic | 35.0% | |
| GTCATTTCTTCGTTCACAAA+TGG | + | chr4.2:11361240-11361259 | MS.gene030823:intron | 35.0% | |
| TAGGTCATCTCACAATTCTA+AGG | + | chr4.2:11363959-11363978 | MS.gene030823:CDS | 35.0% | |
| TATAGAGTTCATGAAGCTGT+AGG | - | chr4.2:11362547-11362566 | None:intergenic | 35.0% | |
| TATCGGTATAATTATTCGGC+TGG | + | chr4.2:11361096-11361115 | MS.gene030823:CDS | 35.0% | |
| TCATCATGTCAATGTAGGTA+CGG | - | chr4.2:11359753-11359772 | None:intergenic | 35.0% | |
| TCTTCAATAGACATTAGCAC+TGG | + | chr4.2:11362991-11363010 | MS.gene030823:CDS | 35.0% | |
| TGAACCTAAAGCACAAAAGA+GGG | - | chr4.2:11362894-11362913 | None:intergenic | 35.0% | |
| TGCATGCATTGTTTAGACTT+TGG | + | chr4.2:11364250-11364269 | MS.gene030823:intron | 35.0% | |
| TGGGAAGATAAATCTATGGA+CGG | - | chr4.2:11361575-11361594 | None:intergenic | 35.0% | |
| TGTTGTGTACACAATCATTG+GGG | - | chr4.2:11362722-11362741 | None:intergenic | 35.0% | |
| TTAAATCGTCTGCTTCATTC+AGG | - | chr4.2:11363247-11363266 | None:intergenic | 35.0% | |
| TTGAACCTAAAGCACAAAAG+AGG | - | chr4.2:11362895-11362914 | None:intergenic | 35.0% | |
| ! | AAGATATTCAGAGGGTATGA+TGG | + | chr4.2:11363064-11363083 | MS.gene030823:intron | 35.0% |
| ! | AAGATTTTGGATCTTGTCTG+TGG | + | chr4.2:11362839-11362858 | MS.gene030823:intron | 35.0% |
| ! | ATTTCTATCAATGGCCTTAG+AGG | - | chr4.2:11362236-11362255 | None:intergenic | 35.0% |
| ! | CACATATTTTACACTGCCTT+TGG | + | chr4.2:11360982-11361001 | MS.gene030823:intron | 35.0% |
| ! | CCTCTCCAAAGATGATTTTA+AGG | + | chr4.2:11359425-11359444 | MS.gene030823:CDS | 35.0% |
| ! | CCTTAAAATCATCTTTGGAG+AGG | - | chr4.2:11359428-11359447 | None:intergenic | 35.0% |
| ! | GGAAAACAATGATAATGCAG+TGG | + | chr4.2:11363821-11363840 | MS.gene030823:CDS | 35.0% |
| ! | GTAATCATGTCACTTGTTCA+AGG | + | chr4.2:11360197-11360216 | MS.gene030823:CDS | 35.0% |
| ! | TGGTTTGTGAACTACTCTTA+GGG | + | chr4.2:11360335-11360354 | MS.gene030823:intron | 35.0% |
| ! | TTATTTTCACTACGGCATAC+GGG | - | chr4.2:11361731-11361750 | None:intergenic | 35.0% |
| ! | TTCTAAAAAGCTAGCTCAAG+TGG | - | chr4.2:11362126-11362145 | None:intergenic | 35.0% |
| ! | TTCTTCGAGTTTAATACTCG+AGG | + | chr4.2:11364345-11364364 | MS.gene030823:CDS | 35.0% |
| !! | AAAGGTGTCTTTGTTTCTGT+TGG | + | chr4.2:11359660-11359679 | MS.gene030823:CDS | 35.0% |
| !!! | TTGTTCTTAAGCTGGCTTTT+TGG | + | chr4.2:11360922-11360941 | MS.gene030823:intron | 35.0% |
| AAATATGTGGAAGTGGGTAG+TGG | - | chr4.2:11360971-11360990 | None:intergenic | 40.0% | |
| AAGGGACGTAATAGCATACA+AGG | - | chr4.2:11361307-11361326 | None:intergenic | 40.0% | |
| ACACAATTAGTCAACTGGGA+CGG | + | chr4.2:11360300-11360319 | MS.gene030823:intron | 40.0% | |
| ACATATGACCAACTTCTGGA+AGG | - | chr4.2:11362692-11362711 | None:intergenic | 40.0% | |
| AGAACAAAACCAGAAGACCA+TGG | - | chr4.2:11362175-11362194 | None:intergenic | 40.0% | |
| AGAGGAAGCTCTTTACTTGA+AGG | - | chr4.2:11362218-11362237 | None:intergenic | 40.0% | |
| AGCAGCTGGTGAGATTATAT+GGG | + | chr4.2:11363996-11364015 | MS.gene030823:intron | 40.0% | |
| ATAAAAGAGATACAGGGCTG+TGG | + | chr4.2:11363323-11363342 | MS.gene030823:intron | 40.0% | |
| CAAAAGAGGGACTAACTATG+AGG | - | chr4.2:11362881-11362900 | None:intergenic | 40.0% | |
| CAAACAGCTTGAGTAAGCAA+AGG | + | chr4.2:11363862-11363881 | MS.gene030823:CDS | 40.0% | |
| CAAACCAGATGAAGTTTCGA+AGG | - | chr4.2:11364426-11364445 | None:intergenic | 40.0% | |
| CAAGTAAAGAGCTTCCTCTA+AGG | + | chr4.2:11362219-11362238 | MS.gene030823:intron | 40.0% | |
| CAAGTAAGCACAGGTTATAC+AGG | - | chr4.2:11361173-11361192 | None:intergenic | 40.0% | |
| CTTCCTCCTCCTTATTAACA+AGG | + | chr4.2:11363621-11363640 | MS.gene030823:intron | 40.0% | |
| CTTCGAAACTTCATCTGGTT+TGG | + | chr4.2:11364424-11364443 | MS.gene030823:CDS | 40.0% | |
| GAGAAAATCGTAACCAAGGT+AGG | - | chr4.2:11359619-11359638 | None:intergenic | 40.0% | |
| GAGAGAATATCTCTCTGGTT+AGG | - | chr4.2:11362354-11362373 | None:intergenic | 40.0% | |
| GCAGTTTATTGAAGGTGAGA+TGG | + | chr4.2:11363175-11363194 | MS.gene030823:intron | 40.0% | |
| GCATAGAAGCTCTACAATGA+AGG | + | chr4.2:11362303-11362322 | MS.gene030823:intron | 40.0% | |
| GCTAACATATTCTCTCCTCT+TGG | + | chr4.2:11362640-11362659 | MS.gene030823:intron | 40.0% | |
| GTTAGGAGAGAATATCTCTC+TGG | - | chr4.2:11362359-11362378 | None:intergenic | 40.0% | |
| TAAAAGAGATACAGGGCTGT+GGG | + | chr4.2:11363324-11363343 | MS.gene030823:intron | 40.0% | |
| TAATGCTGACAAGTAAGCAC+AGG | - | chr4.2:11361182-11361201 | None:intergenic | 40.0% | |
| TACACAAGAAGAAAGAGGGT+GGG | - | chr4.2:11362667-11362686 | None:intergenic | 40.0% | |
| TGAAAACAGCGGATCTGAAA+AGG | + | chr4.2:11363533-11363552 | MS.gene030823:CDS | 40.0% | |
| TGAAAAGGAGGCAAACAACA+CGG | + | chr4.2:11363548-11363567 | MS.gene030823:CDS | 40.0% | |
| TGTGTAAACCTTCCAGAAGT+TGG | + | chr4.2:11362681-11362700 | MS.gene030823:intron | 40.0% | |
| TGTTCCTTCGAAACTTCATC+TGG | + | chr4.2:11364419-11364438 | MS.gene030823:CDS | 40.0% | |
| TGTTTGTGAATCTCAGTGCT+TGG | + | chr4.2:11361996-11362015 | MS.gene030823:intron | 40.0% | |
| TTAAAACATGCAGCTGAGGT+AGG | - | chr4.2:11359722-11359741 | None:intergenic | 40.0% | |
| TTACACAAGAAGAAAGAGGG+TGG | - | chr4.2:11362668-11362687 | None:intergenic | 40.0% | |
| TTGTGAACTACTCTTAGGGA+TGG | + | chr4.2:11360339-11360358 | MS.gene030823:intron | 40.0% | |
| ! | ATTCTTTTCCAACACCGATC+TGG | - | chr4.2:11359689-11359708 | None:intergenic | 40.0% |
| ! | CGATCAAAGTACCTGAAACA+AGG | - | chr4.2:11361910-11361929 | None:intergenic | 40.0% |
| ! | GATACAGAACTTGCTTCTAG+TGG | + | chr4.2:11363021-11363040 | MS.gene030823:CDS | 40.0% |
| ! | GTGGTTTGTGAACTACTCTT+AGG | + | chr4.2:11360334-11360353 | MS.gene030823:intron | 40.0% |
| ! | TAGTCCCTCTTTTGTGCTTT+AGG | + | chr4.2:11362887-11362906 | MS.gene030823:intron | 40.0% |
| ! | TGAAACCATGTTTAGGACGA+AGG | + | chr4.2:11363474-11363493 | MS.gene030823:intron | 40.0% |
| ! | TTCCAGAAGTTGGTCATATG+TGG | + | chr4.2:11362691-11362710 | MS.gene030823:intron | 40.0% |
| ! | TTTGAAGCAGGTGAAAACAG+CGG | + | chr4.2:11363522-11363541 | MS.gene030823:CDS | 40.0% |
| !! | AAAAAGGAGAGCTTTGAAGC+AGG | + | chr4.2:11363510-11363529 | MS.gene030823:CDS | 40.0% |
| !! | ATCGGTGTTGGAAAAGAATC+TGG | + | chr4.2:11359690-11359709 | MS.gene030823:CDS | 40.0% |
| !! | GATAGATTTGAAGAGCGTTG+AGG | - | chr4.2:11363154-11363173 | None:intergenic | 40.0% |
| !! | GGTGTAATTTGATTTGCAGG+AGG | + | chr4.2:11363800-11363819 | MS.gene030823:intron | 40.0% |
| !!! | CTTAAGCTGGCTTTTTGGTT+TGG | + | chr4.2:11360927-11360946 | MS.gene030823:intron | 40.0% |
| !!! | GAGTTGCTTTTCTTCCTGTA+GGG | + | chr4.2:11364169-11364188 | MS.gene030823:intron | 40.0% |
| !!! | TGAGTTGCTTTTCTTCCTGT+AGG | + | chr4.2:11364168-11364187 | MS.gene030823:intron | 40.0% |
| !!! | TGATTTTAAGGTTCTCTCCG+CGG | + | chr4.2:11359437-11359456 | MS.gene030823:CDS | 40.0% |
| AAACAGCGGATCTGAAAAGG+AGG | + | chr4.2:11363536-11363555 | MS.gene030823:CDS | 45.0% | |
| AATCGTAACCAAGGTAGGTG+AGG | - | chr4.2:11359614-11359633 | None:intergenic | 45.0% | |
| ACACAAGAAGAAAGAGGGTG+GGG | - | chr4.2:11362666-11362685 | None:intergenic | 45.0% | |
| ATACGCCTGACAGTGGAAAT+CGG | - | chr4.2:11364313-11364332 | None:intergenic | 45.0% | |
| ATATCAAGGCCATGGTCTTC+TGG | + | chr4.2:11362163-11362182 | MS.gene030823:intron | 45.0% | |
| ATTATTCGGCTGGCAGAACA+TGG | + | chr4.2:11361106-11361125 | MS.gene030823:CDS | 45.0% | |
| ATTCGGACAATGAGTTCAGC+AGG | - | chr4.2:11359495-11359514 | None:intergenic | 45.0% | |
| CAGGTACTTTGATCGTGATG+TGG | + | chr4.2:11361915-11361934 | MS.gene030823:intron | 45.0% | |
| CATGCTTGAGACAAGCGATT+CGG | - | chr4.2:11359512-11359531 | None:intergenic | 45.0% | |
| CATGTCCTTCGTCCTAAACA+TGG | - | chr4.2:11363482-11363501 | None:intergenic | 45.0% | |
| CGAAGGAACAGTTCAACACT+TGG | - | chr4.2:11364409-11364428 | None:intergenic | 45.0% | |
| CTCAAAAAGACAAGGGTGGT+AGG | + | chr4.2:11363940-11363959 | MS.gene030823:CDS | 45.0% | |
| CTCAAATGCAAATGAGCAGC+TGG | + | chr4.2:11363982-11364001 | MS.gene030823:CDS | 45.0% | |
| CTTTAAGTGCAGCAACTGCA+AGG | - | chr4.2:11360020-11360039 | None:intergenic | 45.0% | |
| GAGCAGCTGGTGAGATTATA+TGG | + | chr4.2:11363995-11364014 | MS.gene030823:intron | 45.0% | |
| GATAAAGGAAGAGACGAAGC+TGG | + | chr4.2:11362955-11362974 | MS.gene030823:CDS | 45.0% | |
| GATGCATGATATCAAGGCCA+TGG | + | chr4.2:11362155-11362174 | MS.gene030823:intron | 45.0% | |
| GGACTAACTATGAGGACAAC+TGG | - | chr4.2:11362873-11362892 | None:intergenic | 45.0% | |
| GTCCACATATGACCAACTTC+TGG | - | chr4.2:11362696-11362715 | None:intergenic | 45.0% | |
| GTTCAGCAGGTACAATGTCA+TGG | - | chr4.2:11359482-11359501 | None:intergenic | 45.0% | |
| TATGCTTATACGCCTGACAG+TGG | - | chr4.2:11364320-11364339 | None:intergenic | 45.0% | |
| TGGCGAGAAAATCGTAACCA+AGG | - | chr4.2:11359623-11359642 | None:intergenic | 45.0% | |
| TTCTTTGCATTTGTCGGACG+AGG | + | chr4.2:11363274-11363293 | MS.gene030823:CDS | 45.0% | |
| ! | AGTGCTTGGTTTGAGGAGAA+TGG | + | chr4.2:11362010-11362029 | MS.gene030823:intron | 45.0% |
| ! | GAATCTCAGTGCTTGGTTTG+AGG | + | chr4.2:11362003-11362022 | MS.gene030823:intron | 45.0% |
| ! | GTGCTTGGTTTGAGGAGAAT+GGG | + | chr4.2:11362011-11362030 | MS.gene030823:intron | 45.0% |
| ! | TGCTTGGTTTGAGGAGAATG+GGG | + | chr4.2:11362012-11362031 | MS.gene030823:intron | 45.0% |
| ! | TGGGACGGTGTTAGATATTG+TGG | + | chr4.2:11360315-11360334 | MS.gene030823:intron | 45.0% |
| !! | ACTTCATCTGGTTTGGCCTA+AGG | + | chr4.2:11364431-11364450 | MS.gene030823:CDS | 45.0% |
| !! | TGAAAGAAGGGCACTTACAG+AGG | - | chr4.2:11360227-11360246 | None:intergenic | 45.0% |
| !! | TATATTTCATAATTTAATTA+GGG | - | chr4.2:11360793-11360812 | None:intergenic | 5.0% |
| !! | TTATATTTCATAATTTAATT+AGG | - | chr4.2:11360794-11360813 | None:intergenic | 5.0% |
| AGATACAGGGCTGTGGGAAA+TGG | + | chr4.2:11363330-11363349 | MS.gene030823:intron | 50.0% | |
| ATCGCTTGTCTCAAGCATGG+TGG | + | chr4.2:11359513-11359532 | MS.gene030823:CDS | 50.0% | |
| CAAACATGGCTTCCCAGTTC+CGG | + | chr4.2:11360148-11360167 | MS.gene030823:CDS | 50.0% | |
| CGAATCGCTTGTCTCAAGCA+TGG | + | chr4.2:11359510-11359529 | MS.gene030823:CDS | 50.0% | |
| GACATGTCCATTGCTTGAGC+AGG | + | chr4.2:11360118-11360137 | MS.gene030823:intron | 50.0% | |
| GAGCAGGCTTTGCACAAACA+TGG | + | chr4.2:11360134-11360153 | MS.gene030823:intron | 50.0% | |
| GCCATAGCATCAGCTCGTAA+GGG | + | chr4.2:11363891-11363910 | MS.gene030823:CDS | 50.0% | |
| GTTCTGCAAATGCAGCGTTC+AGG | + | chr4.2:11361033-11361052 | MS.gene030823:intron | 50.0% | |
| GTTTCTGTTGGTCGCCAGAT+CGG | + | chr4.2:11359672-11359691 | MS.gene030823:CDS | 50.0% | |
| TAGCATCAGCTCGTAAGGGA+AGG | + | chr4.2:11363895-11363914 | MS.gene030823:CDS | 50.0% | |
| TCCCTTACGAGCTGATGCTA+TGG | - | chr4.2:11363895-11363914 | None:intergenic | 50.0% | |
| TGCAAAGCCTGCTCAAGCAA+TGG | - | chr4.2:11360128-11360147 | None:intergenic | 50.0% | |
| TGCCATAGCATCAGCTCGTA+AGG | + | chr4.2:11363890-11363909 | MS.gene030823:CDS | 50.0% | |
| TGGTTAGGAGTCTCTGACTC+TGG | - | chr4.2:11362339-11362358 | None:intergenic | 50.0% | |
| AGGTTCTCTCCGCGGTTGAA+TGG | + | chr4.2:11359445-11359464 | MS.gene030823:CDS | 55.0% | |
| CAAGCATGGTGGCACCTACA+AGG | + | chr4.2:11359524-11359543 | MS.gene030823:CDS | 55.0% | |
| CGATTACGGTTCACAGCCTC+CGG | - | chr4.2:11360170-11360189 | None:intergenic | 55.0% | |
| GGTTCTCTCCGCGGTTGAAT+GGG | + | chr4.2:11359446-11359465 | MS.gene030823:CDS | 55.0% | |
| GTTCTCTCCGCGGTTGAATG+GGG | + | chr4.2:11359447-11359466 | MS.gene030823:CDS | 55.0% | |
| TCTCATGCCCCATTCAACCG+CGG | - | chr4.2:11359457-11359476 | None:intergenic | 55.0% | |
| !! | GACCACCGATTTCCACTGTC+AGG | + | chr4.2:11364305-11364324 | MS.gene030823:intron | 55.0% |
| ACATGGCTTCCCAGTTCCGG+AGG | + | chr4.2:11360151-11360170 | MS.gene030823:CDS | 60.0% | |
| AGAAAGAGGGTGGGGCCAAG+AGG | - | chr4.2:11362658-11362677 | None:intergenic | 60.0% | |
| CGCCTGACAGTGGAAATCGG+TGG | - | chr4.2:11364310-11364329 | None:intergenic | 60.0% | |
| GGCTTTCGCCTCACCTACCT+TGG | + | chr4.2:11359603-11359622 | MS.gene030823:CDS | 60.0% | |
| GGTTCACAGCCTCCGGAACT+GGG | - | chr4.2:11360163-11360182 | None:intergenic | 60.0% | |
| GTTGGTCGCCAGATCGGTGT+TGG | + | chr4.2:11359678-11359697 | MS.gene030823:CDS | 60.0% | |
| CGGTTCACAGCCTCCGGAAC+TGG | - | chr4.2:11360164-11360183 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 11359396 | 11364459 | 11359396 | ID=MS.gene030823 |
| chr4.2 | mRNA | 11359396 | 11364459 | 11359396 | ID=MS.gene030823.t1;Parent=MS.gene030823 |
| chr4.2 | exon | 11359396 | 11359711 | 11359396 | ID=MS.gene030823.t1.exon1;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11359396 | 11359711 | 11359396 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11359920 | 11360056 | 11359920 | ID=MS.gene030823.t1.exon2;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11359920 | 11360056 | 11359920 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11360140 | 11360228 | 11360140 | ID=MS.gene030823.t1.exon3;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11360140 | 11360228 | 11360140 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11361048 | 11361138 | 11361048 | ID=MS.gene030823.t1.exon4;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11361048 | 11361138 | 11361048 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11361241 | 11361290 | 11361241 | ID=MS.gene030823.t1.exon5;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11361241 | 11361290 | 11361241 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11361918 | 11361965 | 11361918 | ID=MS.gene030823.t1.exon6;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11361918 | 11361965 | 11361918 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11362909 | 11363077 | 11362909 | ID=MS.gene030823.t1.exon7;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11362909 | 11363077 | 11362909 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11363179 | 11363295 | 11363179 | ID=MS.gene030823.t1.exon8;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11363179 | 11363295 | 11363179 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11363489 | 11363569 | 11363489 | ID=MS.gene030823.t1.exon9;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11363489 | 11363569 | 11363489 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11363819 | 11364003 | 11363819 | ID=MS.gene030823.t1.exon10;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11363819 | 11364003 | 11363819 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| chr4.2 | exon | 11364327 | 11364459 | 11364327 | ID=MS.gene030823.t1.exon11;Parent=MS.gene030823.t1 |
| chr4.2 | CDS | 11364327 | 11364459 | 11364327 | ID=cds.MS.gene030823.t1;Parent=MS.gene030823.t1 |
| Gene Sequence |
| Protein sequence |
