Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013784.t1 | XP_003602047.1 | 100 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 1.00E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013784.t1 | Q9FXM3 | 80.3 | 340 | 66 | 1 | 1 | 340 | 1 | 339 | 9.6e-157 | 554.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013784.t1 | B7FK39 | 100.0 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 7.2e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013784.t1 | MTR_3g088380 | 100.000 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 0.0 | 702 |
| MS.gene013784.t1 | MTR_4g102860 | 39.557 | 316 | 181 | 4 | 10 | 325 | 16 | 321 | 1.24e-69 | 221 |
| MS.gene013784.t1 | MTR_3g088120 | 47.368 | 209 | 104 | 2 | 11 | 219 | 34 | 236 | 1.81e-64 | 206 |
| MS.gene013784.t1 | MTR_3g088120 | 47.368 | 209 | 104 | 2 | 11 | 219 | 34 | 236 | 1.05e-63 | 206 |
| MS.gene013784.t1 | MTR_6g027590 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 1.05e-32 | 125 |
| MS.gene013784.t1 | MTR_6g471010 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 2.03e-32 | 124 |
| MS.gene013784.t1 | MTR_3g118160 | 27.059 | 255 | 147 | 11 | 11 | 234 | 422 | 668 | 1.81e-15 | 77.8 |
| MS.gene013784.t1 | MTR_4g104350 | 23.922 | 255 | 173 | 5 | 1 | 240 | 270 | 518 | 6.26e-14 | 73.2 |
| MS.gene013784.t1 | MTR_4g104350 | 23.922 | 255 | 173 | 5 | 1 | 240 | 270 | 518 | 6.67e-14 | 73.2 |
| MS.gene013784.t1 | MTR_4g102700 | 46.377 | 69 | 37 | 0 | 127 | 195 | 1 | 69 | 7.74e-13 | 65.9 |
| MS.gene013784.t1 | MTR_5g020810 | 23.707 | 232 | 150 | 5 | 9 | 219 | 412 | 637 | 3.64e-11 | 64.7 |
| MS.gene013784.t1 | MTR_4g134530 | 23.810 | 294 | 197 | 5 | 13 | 287 | 429 | 714 | 4.88e-11 | 64.7 |
| MS.gene013784.t1 | MTR_5g098850 | 25.430 | 291 | 173 | 10 | 6 | 269 | 111 | 384 | 6.77e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013784.t1 | AT1G21690 | 79.351 | 339 | 69 | 1 | 1 | 338 | 1 | 339 | 0.0 | 572 |
| MS.gene013784.t1 | AT1G21690 | 77.286 | 339 | 69 | 2 | 1 | 338 | 1 | 332 | 0.0 | 551 |
| MS.gene013784.t1 | AT1G21690 | 76.696 | 339 | 66 | 2 | 1 | 338 | 1 | 327 | 0.0 | 545 |
| MS.gene013784.t1 | AT1G21690 | 77.607 | 326 | 68 | 3 | 1 | 321 | 1 | 326 | 0.0 | 534 |
| MS.gene013784.t1 | AT1G63160 | 39.024 | 328 | 184 | 5 | 9 | 330 | 15 | 332 | 5.90e-68 | 216 |
| MS.gene013784.t1 | AT1G77470 | 46.479 | 213 | 101 | 3 | 10 | 219 | 40 | 242 | 3.36e-63 | 205 |
| MS.gene013784.t1 | AT5G27740 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 3.77e-32 | 123 |
| MS.gene013784.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 3.82e-15 | 77.0 |
| MS.gene013784.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 3.82e-15 | 77.0 |
| MS.gene013784.t1 | AT5G45720 | 24.653 | 288 | 204 | 5 | 9 | 287 | 343 | 626 | 4.43e-15 | 77.0 |
| MS.gene013784.t1 | AT5G45720 | 24.653 | 288 | 204 | 5 | 9 | 287 | 343 | 626 | 4.57e-15 | 77.0 |
| MS.gene013784.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene013784.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene013784.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene013784.t1 | AT5G22010 | 25.600 | 250 | 140 | 8 | 4 | 218 | 335 | 573 | 8.46e-15 | 76.3 |
| MS.gene013784.t1 | AT5G22010 | 25.600 | 250 | 140 | 8 | 4 | 218 | 335 | 573 | 8.89e-15 | 75.9 |
| MS.gene013784.t1 | AT2G02480 | 25.984 | 254 | 160 | 7 | 6 | 240 | 446 | 690 | 1.58e-13 | 72.4 |
| MS.gene013784.t1 | AT2G02480 | 25.984 | 254 | 160 | 7 | 6 | 240 | 446 | 690 | 1.58e-13 | 72.4 |
| MS.gene013784.t1 | AT1G14460 | 25.329 | 304 | 194 | 8 | 6 | 287 | 419 | 711 | 2.68e-13 | 71.6 |
| MS.gene013784.t1 | AT1G24290 | 24.444 | 270 | 176 | 8 | 9 | 269 | 101 | 351 | 4.47e-11 | 64.3 |
Find 84 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATACTTCTTAGGCTTAT+TGG | 0.122606 | 3.4:+81550555 | None:intergenic |
| CAGTCTGCGGCTCGCTTATT+TGG | 0.138170 | 3.4:-81548447 | MS.gene013784:CDS |
| CTTCAAGGTGTGCAAAATTC+AGG | 0.235497 | 3.4:-81549780 | MS.gene013784:CDS |
| TCACAATTCACATACTTCTT+AGG | 0.237994 | 3.4:+81550547 | None:intergenic |
| GCTCTATAAATCTAGGGTTT+TGG | 0.296629 | 3.4:-81550656 | MS.gene013784:CDS |
| AAGGATCTGATTTCTGTGTC+TGG | 0.304999 | 3.4:-81548408 | MS.gene013784:CDS |
| CTTTGCAGATGTATACTATT+CGG | 0.322240 | 3.4:+81549725 | None:intergenic |
| GTACTCGAACTACTTCTTCT+TGG | 0.343225 | 3.4:+81550892 | None:intergenic |
| TCCAGAACAATTATCTTATA+CGG | 0.355355 | 3.4:+81550421 | None:intergenic |
| GAATGAATTACTTACGCTTC+CGG | 0.359559 | 3.4:+81550851 | None:intergenic |
| AATCAGATCCTTGGAAGAAA+TGG | 0.365273 | 3.4:+81548419 | None:intergenic |
| CCCTCGTAAGCAAATCCTTC+TGG | 0.371183 | 3.4:+81546919 | None:intergenic |
| TACTTACGCTTCCGGTTTCG+AGG | 0.379428 | 3.4:+81550859 | None:intergenic |
| GCTACGTCTTTCACTTGCTT+TGG | 0.383156 | 3.4:+81550918 | None:intergenic |
| TCGGGCTATAACATACTTGC+AGG | 0.386432 | 3.4:-81549518 | MS.gene013784:intron |
| TTCTATGGTCCTCCCGGCAC+TGG | 0.398862 | 3.4:-81550727 | MS.gene013784:CDS |
| GCCCTGAGCTCTATAAATCT+AGG | 0.401836 | 3.4:-81550663 | MS.gene013784:CDS |
| TGCCCACACATGCTCTTCTA+TGG | 0.405641 | 3.4:-81550742 | MS.gene013784:CDS |
| ACCGTATAAGATAATTGTTC+TGG | 0.408822 | 3.4:-81550422 | MS.gene013784:CDS |
| ACCCTAGATTTATAGAGCTC+AGG | 0.441177 | 3.4:+81550661 | None:intergenic |
| AGGATCTGATTTCTGTGTCT+GGG | 0.443180 | 3.4:-81548407 | MS.gene013784:CDS |
| TTATATGCAACTACATTAGC+AGG | 0.448705 | 3.4:-81550236 | MS.gene013784:intron |
| ATCGCGGTATTAACGTTGTT+CGG | 0.450811 | 3.4:-81550615 | MS.gene013784:CDS |
| CTCACCAACACCCTCGAAAC+CGG | 0.458137 | 3.4:-81550870 | MS.gene013784:CDS |
| TTATAGAACCACTTGCTTCA+AGG | 0.458269 | 3.4:-81549795 | MS.gene013784:CDS |
| CGTCTTTCACTTGCTTTGGA+CGG | 0.461616 | 3.4:+81550922 | None:intergenic |
| CTCATGATTTCTTCTGTCAG+TGG | 0.463158 | 3.4:+81549751 | None:intergenic |
| GGCAAGAATATCCAAGAAGC+TGG | 0.470657 | 3.4:-81547601 | MS.gene013784:CDS |
| GGTTGAGTGCTCTGAATGAT+TGG | 0.473772 | 3.4:+81551057 | None:intergenic |
| AAACTTACTCTAAAGTTACT+AGG | 0.480746 | 3.4:-81550266 | MS.gene013784:CDS |
| TGGATCTTCCATTTCTTCCA+AGG | 0.489878 | 3.4:-81548427 | MS.gene013784:CDS |
| AGACACAGAAATCAGATCCT+TGG | 0.500862 | 3.4:+81548410 | None:intergenic |
| CCCTAGATTTATAGAGCTCA+GGG | 0.505126 | 3.4:+81550662 | None:intergenic |
| TGAGTTAGCATCTGAGAGAC+TGG | 0.506538 | 3.4:+81547768 | None:intergenic |
| GATTTCGCTGCTGTCGCTGT+CGG | 0.516035 | 3.4:-81550580 | MS.gene013784:CDS |
| AAAGCTGATGGGCGATAGCA+AGG | 0.528626 | 3.4:+81550689 | None:intergenic |
| TTCTCAAGGAGATCTTCGTC+GGG | 0.532165 | 3.4:-81549536 | MS.gene013784:CDS |
| CCCTGAGCTCTATAAATCTA+GGG | 0.532759 | 3.4:-81550662 | MS.gene013784:CDS |
| GTCAACAATTTCATTGCAGA+GGG | 0.534353 | 3.4:-81547795 | MS.gene013784:CDS |
| GAATTGCAGTGCCTAGTTGA+TGG | 0.534378 | 3.4:-81547006 | MS.gene013784:intron |
| GTATACATCTGCAAAGAAGA+AGG | 0.535887 | 3.4:-81549718 | MS.gene013784:CDS |
| GCTCAGGGCCGAAAAGCTGA+TGG | 0.537149 | 3.4:+81550677 | None:intergenic |
| TAAGATAATTGTTCTGGATG+AGG | 0.538029 | 3.4:-81550416 | MS.gene013784:CDS |
| GGTTACTATTTCTCGACCCA+TGG | 0.542200 | 3.4:+81551036 | None:intergenic |
| TTTCTCAAGGAGATCTTCGT+CGG | 0.544188 | 3.4:-81549537 | MS.gene013784:CDS |
| ACTTTAAGTAATATTTCTCA+AGG | 0.547470 | 3.4:-81549550 | MS.gene013784:CDS |
| GCAAGAATATCCAAGAAGCT+GGG | 0.552008 | 3.4:-81547600 | MS.gene013784:CDS |
| ACTTACGCTTCCGGTTTCGA+GGG | 0.555639 | 3.4:+81550860 | None:intergenic |
| AGTGCCTCAACAACCTCCGC+TGG | 0.556568 | 3.4:+81547864 | None:intergenic |
| TGTTCCAGCGGAGGTTGTTG+AGG | 0.557324 | 3.4:-81547868 | MS.gene013784:CDS |
| CTTCTTAAAGCATGCAGAAG+TGG | 0.558722 | 3.4:-81547843 | MS.gene013784:CDS |
| GGCGATAGCAAGGGCAGTAG+TGG | 0.560027 | 3.4:+81550699 | None:intergenic |
| TTCAATGACAGAAGATGCCC+AGG | 0.563950 | 3.4:-81550389 | MS.gene013784:intron |
| CTCAGGGCCGAAAAGCTGAT+GGG | 0.565586 | 3.4:+81550678 | None:intergenic |
| GGACCATAGAAGAGCATGTG+TGG | 0.572859 | 3.4:+81550739 | None:intergenic |
| GCTTCCGGTTTCGAGGGTGT+TGG | 0.575401 | 3.4:+81550866 | None:intergenic |
| ATTCATCAGCACCATCAACT+AGG | 0.577021 | 3.4:+81546995 | None:intergenic |
| CGACATATCAGATGAGCAGA+AGG | 0.579308 | 3.4:-81547622 | MS.gene013784:CDS |
| TTTGCACACCTTGAAGCAAG+TGG | 0.582075 | 3.4:+81549787 | None:intergenic |
| TTTGGTTACAGAATGCACTA+AGG | 0.585073 | 3.4:-81550299 | MS.gene013784:intron |
| CATTCAGAGCACTCAACCAT+GGG | 0.590157 | 3.4:-81551052 | MS.gene013784:CDS |
| AGTCAACAATTTCATTGCAG+AGG | 0.595219 | 3.4:-81547796 | MS.gene013784:CDS |
| AGGTTCCTACCTCAGCATCA+AGG | 0.596936 | 3.4:+81549689 | None:intergenic |
| CCAGAAGGATTTGCTTACGA+GGG | 0.598134 | 3.4:-81546919 | MS.gene013784:CDS |
| AAACCAGATTGTTCCAGCGG+AGG | 0.598887 | 3.4:-81547877 | MS.gene013784:intron |
| ATGCTCTTCTATGGTCCTCC+CGG | 0.603856 | 3.4:-81550733 | MS.gene013784:CDS |
| TCATTCAGAGCACTCAACCA+TGG | 0.605871 | 3.4:-81551053 | MS.gene013784:CDS |
| CAAGAATATCCAAGAAGCTG+GGG | 0.606115 | 3.4:-81547599 | MS.gene013784:CDS |
| ATTATCTTATACGGTGGACA+CGG | 0.615926 | 3.4:+81550430 | None:intergenic |
| GGATCTGATTTCTGTGTCTG+GGG | 0.616871 | 3.4:-81548406 | MS.gene013784:intron |
| GCTTTATGTAACATGCCAGA+AGG | 0.617481 | 3.4:-81546934 | MS.gene013784:CDS |
| AGGAATCTACCTTGATGCTG+AGG | 0.617847 | 3.4:-81549698 | MS.gene013784:intron |
| AGAACAATTATCTTATACGG+TGG | 0.619264 | 3.4:+81550424 | None:intergenic |
| AGTCTCTCAGATGCTAACTC+AGG | 0.621124 | 3.4:-81547766 | MS.gene013784:intron |
| GCCAGAAGGATTTGCTTACG+AGG | 0.622388 | 3.4:-81546920 | MS.gene013784:CDS |
| AAGCTGATGGGCGATAGCAA+GGG | 0.629781 | 3.4:+81550690 | None:intergenic |
| TTGAAACCAGATTGTTCCAG+CGG | 0.632187 | 3.4:-81547880 | MS.gene013784:intron |
| ATACTTGCAGCTTCTTGATG+TGG | 0.635384 | 3.4:-81546974 | MS.gene013784:CDS |
| GAATGCACTAAGGCGGACGA+TGG | 0.637676 | 3.4:-81550289 | MS.gene013784:CDS |
| GACCATAGAAGAGCATGTGT+GGG | 0.648975 | 3.4:+81550740 | None:intergenic |
| GGTTACAGAATGCACTAAGG+CGG | 0.673205 | 3.4:-81550296 | MS.gene013784:intron |
| AAGAATATCCAAGAAGCTGG+GGG | 0.689443 | 3.4:-81547598 | MS.gene013784:CDS |
| CTTAATGCTAGTGATGATCG+CGG | 0.706726 | 3.4:-81550631 | MS.gene013784:CDS |
| TCAACAATTTCATTGCAGAG+GGG | 0.739196 | 3.4:-81547794 | MS.gene013784:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTTAAAATATATAAA+AGG | - | chr3.4:81550544-81550563 | MS.gene013784:intron | 0.0% |
| !! | AAATTATATATTAATTGAAC+AGG | + | chr3.4:81547645-81547664 | None:intergenic | 10.0% |
| !! | AACTTAATTTATTAAAACAA+TGG | + | chr3.4:81547947-81547966 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAAAAAAAATC+CGG | - | chr3.4:81548803-81548822 | MS.gene013784:intron | 10.0% |
| !!! | ATTTAGTATTTTAAAAAATC+AGG | + | chr3.4:81549818-81549837 | None:intergenic | 10.0% |
| !!! | ATTTTAATGATAATATTACA+CGG | - | chr3.4:81548564-81548583 | MS.gene013784:intron | 10.0% |
| !!! | TTTTTAAAATACTAAATACA+TGG | - | chr3.4:81549821-81549840 | MS.gene013784:intron | 10.0% |
| !! | AAACTAAATTTCAACATAAA+TGG | - | chr3.4:81550790-81550809 | MS.gene013784:intron | 15.0% |
| !! | AAGAAAAAAAAATCAGTAAA+TGG | + | chr3.4:81547787-81547806 | None:intergenic | 15.0% |
| !! | TACAGAAATCTTATAAAAAA+GGG | + | chr3.4:81547492-81547511 | None:intergenic | 15.0% |
| !! | TTACAGAAATCTTATAAAAA+AGG | + | chr3.4:81547493-81547512 | None:intergenic | 15.0% |
| !!! | AATAAAACTCAAAAGTATAT+TGG | + | chr3.4:81547460-81547479 | None:intergenic | 15.0% |
| !!! | AGGAATAGTTTTTATTATAT+TGG | - | chr3.4:81550859-81550878 | MS.gene013784:intron | 15.0% |
| !!! | GGAATAGTTTTTATTATATT+GGG | - | chr3.4:81550860-81550879 | MS.gene013784:intron | 15.0% |
| !!! | TCTTTTATAATATTTTCGAA+AGG | + | chr3.4:81549212-81549231 | None:intergenic | 15.0% |
| !! | AAATAAATTCAATTGCAAGA+TGG | - | chr3.4:81549005-81549024 | MS.gene013784:intron | 20.0% |
| !! | AAATATCATGATCAATACAA+AGG | - | chr3.4:81548042-81548061 | MS.gene013784:intron | 20.0% |
| !! | AATCTTATAAAAAAGGGAAA+AGG | + | chr3.4:81547486-81547505 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAATTGGAA+TGG | + | chr3.4:81546977-81546996 | None:intergenic | 20.0% |
| !! | ACAATCTTAGTGATAATAAA+GGG | - | chr3.4:81549358-81549377 | MS.gene013784:intron | 20.0% |
| !! | ACAGAAAAAGATGATTATTA+AGG | + | chr3.4:81549134-81549153 | None:intergenic | 20.0% |
| !! | ACTTTAAGTAATATTTCTCA+AGG | - | chr3.4:81548428-81548447 | MS.gene013784:CDS | 20.0% |
| !! | ATACATTATTCAAAGTGAAA+TGG | + | chr3.4:81548635-81548654 | None:intergenic | 20.0% |
| !! | ATTGGAATTGAAATTGAAAT+TGG | + | chr3.4:81546982-81547001 | None:intergenic | 20.0% |
| !! | CATTTGTAATTTCTCTAAAT+AGG | + | chr3.4:81550680-81550699 | None:intergenic | 20.0% |
| !! | CTATTTAGAGAAATTACAAA+TGG | - | chr3.4:81550678-81550697 | MS.gene013784:CDS | 20.0% |
| !! | TGTACTTCAGTTTAATATAT+AGG | - | chr3.4:81550720-81550739 | MS.gene013784:CDS | 20.0% |
| !!! | ACAAATTAGTTTTTAATGCA+AGG | + | chr3.4:81549270-81549289 | None:intergenic | 20.0% |
| !!! | ATTTCTGTAACTTATGTTTT+GGG | - | chr3.4:81547503-81547522 | MS.gene013784:intron | 20.0% |
| !!! | TAATTTTGATTTAGCAAACA+AGG | - | chr3.4:81550158-81550177 | MS.gene013784:intron | 20.0% |
| !!! | TGCATTAAAAACTAATTTGT+TGG | - | chr3.4:81549270-81549289 | MS.gene013784:intron | 20.0% |
| !!! | TTATAATATTTTCGAAAGGA+AGG | + | chr3.4:81549208-81549227 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTCACATTCTTA+AGG | - | chr3.4:81547812-81547831 | MS.gene013784:CDS | 20.0% |
| ! | AAATCAGAGAAACAGAAAAT+TGG | + | chr3.4:81547000-81547019 | None:intergenic | 25.0% |
| ! | AATGAATTAGGAAGAAAAGA+GGG | + | chr3.4:81547173-81547192 | None:intergenic | 25.0% |
| ! | AGACTGAAAATGTTAATACT+GGG | + | chr3.4:81549517-81549536 | None:intergenic | 25.0% |
| ! | AGTTCATATGTGCTATAAAT+GGG | - | chr3.4:81548927-81548946 | MS.gene013784:intron | 25.0% |
| ! | ATAATTATTAGCTGTATGGA+AGG | - | chr3.4:81549747-81549766 | MS.gene013784:CDS | 25.0% |
| ! | CTTTGATATAAAAACAGAAC+AGG | + | chr3.4:81549623-81549642 | None:intergenic | 25.0% |
| ! | GAATTGTAACCAACTTAATT+AGG | + | chr3.4:81550936-81550955 | None:intergenic | 25.0% |
| ! | GACAATCTTAGTGATAATAA+AGG | - | chr3.4:81549357-81549376 | MS.gene013784:intron | 25.0% |
| ! | GTCTTGATTTAATTATGTAG+TGG | + | chr3.4:81549340-81549359 | None:intergenic | 25.0% |
| ! | TATGTGCAACTTAAAATACT+TGG | + | chr3.4:81550526-81550545 | None:intergenic | 25.0% |
| ! | TCCAGAACAATTATCTTATA+CGG | + | chr3.4:81547560-81547579 | None:intergenic | 25.0% |
| ! | TGACATAATTATTAGCTGTA+TGG | - | chr3.4:81549743-81549762 | MS.gene013784:CDS | 25.0% |
| ! | TTAGTATATTTGCATCTGTA+GGG | - | chr3.4:81548398-81548417 | MS.gene013784:intron | 25.0% |
| ! | TTTAGTATATTTGCATCTGT+AGG | - | chr3.4:81548397-81548416 | MS.gene013784:intron | 25.0% |
| !! | GATTTCTGTAACTTATGTTT+TGG | - | chr3.4:81547502-81547521 | MS.gene013784:intron | 25.0% |
| !!! | AAACTTACTCTAAAGTTACT+AGG | - | chr3.4:81547712-81547731 | MS.gene013784:intron | 25.0% |
| !!! | AAGCAACACACTTTTTTAAT+AGG | + | chr3.4:81548542-81548561 | None:intergenic | 25.0% |
| !!! | TATATGTCCATTTTTCTGTA+TGG | - | chr3.4:81549670-81549689 | MS.gene013784:intron | 25.0% |
| !!! | TTTCAAGATTTTAGAAAGTC+AGG | + | chr3.4:81550084-81550103 | None:intergenic | 25.0% |
| AAAAACAGAGAAAACATACC+TGG | + | chr3.4:81547610-81547629 | None:intergenic | 30.0% | |
| AAAACAGAGAAAACATACCT+GGG | + | chr3.4:81547609-81547628 | None:intergenic | 30.0% | |
| AAATTGGAATGGAGATAAAG+TGG | + | chr3.4:81546966-81546985 | None:intergenic | 30.0% | |
| AACAATACCTCTACAAACAA+TGG | + | chr3.4:81548357-81548376 | None:intergenic | 30.0% | |
| AACATAAATGGCCCTATATA+TGG | - | chr3.4:81550802-81550821 | MS.gene013784:intron | 30.0% | |
| AAGGTTACTTATGATCCTTT+AGG | - | chr3.4:81550411-81550430 | MS.gene013784:CDS | 30.0% | |
| AATGAAAACCATGTACATCA+AGG | + | chr3.4:81547859-81547878 | None:intergenic | 30.0% | |
| AATTAAACGATTGTCAACAC+CGG | + | chr3.4:81548825-81548844 | None:intergenic | 30.0% | |
| ACATAAATGGCCCTATATAT+GGG | - | chr3.4:81550803-81550822 | MS.gene013784:intron | 30.0% | |
| ACATTGTAAAAGCCTTAGTT+TGG | + | chr3.4:81550289-81550308 | None:intergenic | 30.0% | |
| ACCGTATAAGATAATTGTTC+TGG | - | chr3.4:81547556-81547575 | MS.gene013784:intron | 30.0% | |
| AGAACAATTATCTTATACGG+TGG | + | chr3.4:81547557-81547576 | None:intergenic | 30.0% | |
| AGAGTTCGTACATACATATT+GGG | - | chr3.4:81549036-81549055 | MS.gene013784:intron | 30.0% | |
| AGCAAGAATAGATAACACAT+AGG | + | chr3.4:81549962-81549981 | None:intergenic | 30.0% | |
| AGGTAAAAGCAAAATCTACA+TGG | + | chr3.4:81549250-81549269 | None:intergenic | 30.0% | |
| ATGAATTAGGAAGAAAAGAG+GGG | + | chr3.4:81547172-81547191 | None:intergenic | 30.0% | |
| ATTGAGAATAGGGAATACAT+TGG | - | chr3.4:81548129-81548148 | MS.gene013784:intron | 30.0% | |
| CAGACTGAAAATGTTAATAC+TGG | + | chr3.4:81549518-81549537 | None:intergenic | 30.0% | |
| CGAAGACAAAAAAAGAATGA+GGG | + | chr3.4:81548860-81548879 | None:intergenic | 30.0% | |
| CTACAGAGATAAACAAAAGA+AGG | + | chr3.4:81550889-81550908 | None:intergenic | 30.0% | |
| CTTTGCAGATGTATACTATT+CGG | + | chr3.4:81548256-81548275 | None:intergenic | 30.0% | |
| GAAGACATACTATGTTGATA+AGG | + | chr3.4:81548497-81548516 | None:intergenic | 30.0% | |
| GAATGAATTAGGAAGAAAAG+AGG | + | chr3.4:81547174-81547193 | None:intergenic | 30.0% | |
| GAGTTCATATGTGCTATAAA+TGG | - | chr3.4:81548926-81548945 | MS.gene013784:intron | 30.0% | |
| GATTATAAGTGACTAATGTC+TGG | - | chr3.4:81550763-81550782 | MS.gene013784:intron | 30.0% | |
| GGTTCAATAATTAAAGCCAA+TGG | - | chr3.4:81548886-81548905 | MS.gene013784:intron | 30.0% | |
| GTAGAATAGATCTGTAATAC+AGG | - | chr3.4:81549163-81549182 | MS.gene013784:intron | 30.0% | |
| GTGAGTATGTTAATTCCTAA+AGG | + | chr3.4:81550429-81550448 | None:intergenic | 30.0% | |
| TAGTATATTTGCATCTGTAG+GGG | - | chr3.4:81548399-81548418 | MS.gene013784:intron | 30.0% | |
| TCACAATTCACATACTTCTT+AGG | + | chr3.4:81547434-81547453 | None:intergenic | 30.0% | |
| TCAGCACTTTATTGAGAATA+GGG | - | chr3.4:81548119-81548138 | MS.gene013784:intron | 30.0% | |
| TCGAAGACAAAAAAAGAATG+AGG | + | chr3.4:81548861-81548880 | None:intergenic | 30.0% | |
| TCTTAAACATACCAAAGCAT+TGG | + | chr3.4:81547897-81547916 | None:intergenic | 30.0% | |
| TGATATAAAAACAGAACAGG+CGG | + | chr3.4:81549620-81549639 | None:intergenic | 30.0% | |
| TTATATGCAACTACATTAGC+AGG | - | chr3.4:81547742-81547761 | MS.gene013784:intron | 30.0% | |
| ! | CATCTTTTTCTGTTAACACT+TGG | - | chr3.4:81549141-81549160 | MS.gene013784:intron | 30.0% |
| ! | GTATTAACATTTTCAGTCTG+CGG | - | chr3.4:81549518-81549537 | MS.gene013784:intron | 30.0% |
| ! | TAAGATAATTGTTCTGGATG+AGG | - | chr3.4:81547562-81547581 | MS.gene013784:intron | 30.0% |
| ! | TTGATTTTTGTCCAATGCTT+TGG | - | chr3.4:81547883-81547902 | MS.gene013784:intron | 30.0% |
| ! | TTTTGATCCATTGTTTGTAG+AGG | - | chr3.4:81548347-81548366 | MS.gene013784:intron | 30.0% |
| !! | AACTAATTTGTTGGCATAAG+TGG | - | chr3.4:81549279-81549298 | MS.gene013784:intron | 30.0% |
| !! | CTTCTTTTGTTTATCTCTGT+AGG | - | chr3.4:81550887-81550906 | MS.gene013784:CDS | 30.0% |
| !! | TGTTGATAATGCTACATGTT+AGG | - | chr3.4:81548748-81548767 | MS.gene013784:intron | 30.0% |
| !!! | CAAGATTGTCGTTTTTTTGT+AGG | - | chr3.4:81548159-81548178 | MS.gene013784:intron | 30.0% |
| AAAGAAGTTCCAGATGAAAC+TGG | + | chr3.4:81550248-81550267 | None:intergenic | 35.0% | |
| AAATGGGAGAGTTCAATTGT+AGG | - | chr3.4:81548943-81548962 | MS.gene013784:intron | 35.0% | |
| AATCAGATCCTTGGAAGAAA+TGG | + | chr3.4:81549562-81549581 | None:intergenic | 35.0% | |
| AATCAGTACAAACTTCGTGA+AGG | + | chr3.4:81549412-81549431 | None:intergenic | 35.0% | |
| AGAAATTACAAATGGCACTC+AGG | - | chr3.4:81550686-81550705 | MS.gene013784:CDS | 35.0% | |
| AGATGCAATACTCAAAAGCT+TGG | + | chr3.4:81549461-81549480 | None:intergenic | 35.0% | |
| AGTCAACAATTTCATTGCAG+AGG | - | chr3.4:81550182-81550201 | MS.gene013784:intron | 35.0% | |
| ATTATCTTATACGGTGGACA+CGG | + | chr3.4:81547551-81547570 | None:intergenic | 35.0% | |
| CACATACTTCTTAGGCTTAT+TGG | + | chr3.4:81547426-81547445 | None:intergenic | 35.0% | |
| CAGCTAAATGTGCAAGAATA+TGG | + | chr3.4:81549990-81550009 | None:intergenic | 35.0% | |
| CATAACTAGCAATATTCTCG+TGG | - | chr3.4:81550494-81550513 | MS.gene013784:intron | 35.0% | |
| CTTATGCTTAAAATGGGAGT+TGG | - | chr3.4:81549071-81549090 | MS.gene013784:intron | 35.0% | |
| GAATGAATTACTTACGCTTC+CGG | + | chr3.4:81547130-81547149 | None:intergenic | 35.0% | |
| GAGAGTTCGTACATACATAT+TGG | - | chr3.4:81549035-81549054 | MS.gene013784:intron | 35.0% | |
| GCAAACACCATACAGAAAAA+TGG | + | chr3.4:81549680-81549699 | None:intergenic | 35.0% | |
| GGGTTGCTTATGCTTAAAAT+GGG | - | chr3.4:81549065-81549084 | MS.gene013784:intron | 35.0% | |
| GTATACATCTGCAAAGAAGA+AGG | - | chr3.4:81548260-81548279 | MS.gene013784:intron | 35.0% | |
| GTCAACAATTTCATTGCAGA+GGG | - | chr3.4:81550183-81550202 | MS.gene013784:intron | 35.0% | |
| GTCAGCACTTTATTGAGAAT+AGG | - | chr3.4:81548118-81548137 | MS.gene013784:intron | 35.0% | |
| TAATCGTGCTTACCAAACTA+AGG | - | chr3.4:81550274-81550293 | MS.gene013784:CDS | 35.0% | |
| TAGGAACCTTAGAGCTTATA+TGG | - | chr3.4:81548303-81548322 | MS.gene013784:intron | 35.0% | |
| TCAACAATTTCATTGCAGAG+GGG | - | chr3.4:81550184-81550203 | MS.gene013784:intron | 35.0% | |
| TCAATTGCAAGATGGTGAAT+TGG | - | chr3.4:81549013-81549032 | MS.gene013784:intron | 35.0% | |
| TGTGAAACTAACTACCACTA+GGG | - | chr3.4:81548713-81548732 | MS.gene013784:intron | 35.0% | |
| TGTGTGTTGAGGAATGAATT+AGG | + | chr3.4:81547185-81547204 | None:intergenic | 35.0% | |
| TTATAGAACCACTTGCTTCA+AGG | - | chr3.4:81548183-81548202 | MS.gene013784:intron | 35.0% | |
| TTCGGTTTCACCCATATATA+GGG | + | chr3.4:81550816-81550835 | None:intergenic | 35.0% | |
| TTGAAAGCGACAAGTGATTT+CGG | + | chr3.4:81550834-81550853 | None:intergenic | 35.0% | |
| TTGGGTTTCTGATATTTCAG+TGG | - | chr3.4:81547521-81547540 | MS.gene013784:intron | 35.0% | |
| TTGTGAAACTAACTACCACT+AGG | - | chr3.4:81548712-81548731 | MS.gene013784:intron | 35.0% | |
| TTTAGAAAGTCAGGAAAAGC+AGG | + | chr3.4:81550075-81550094 | None:intergenic | 35.0% | |
| TTTAGTCACCTTGATGTACA+TGG | - | chr3.4:81547848-81547867 | MS.gene013784:CDS | 35.0% | |
| TTTCGGTTTCACCCATATAT+AGG | + | chr3.4:81550817-81550836 | None:intergenic | 35.0% | |
| TTTGGTTACAGAATGCACTA+AGG | - | chr3.4:81547679-81547698 | MS.gene013784:intron | 35.0% | |
| ! | AGGTATTGTTGACATCATAG+CGG | - | chr3.4:81548367-81548386 | MS.gene013784:intron | 35.0% |
| ! | CAATTCTTACTTGTTGCTTG+TGG | - | chr3.4:81550950-81550969 | MS.gene013784:intron | 35.0% |
| ! | GATAACACATAGGAAGCATA+AGG | + | chr3.4:81549952-81549971 | None:intergenic | 35.0% |
| ! | TACATACATATTGGGCTAGA+GGG | - | chr3.4:81549044-81549063 | MS.gene013784:intron | 35.0% |
| ! | TCTTTTCCTTCAGTTGTTTG+AGG | - | chr3.4:81550317-81550336 | MS.gene013784:intron | 35.0% |
| !! | AAAGTGCTGACAAGAACAAT+AGG | + | chr3.4:81548109-81548128 | None:intergenic | 35.0% |
| !! | GCTCTATAAATCTAGGGTTT+TGG | - | chr3.4:81547322-81547341 | MS.gene013784:intron | 35.0% |
| !!! | CTTTTTTTGTCTTCGAATGC+TGG | - | chr3.4:81548865-81548884 | MS.gene013784:intron | 35.0% |
| !!! | GAGCTGATTTTTAGTGCATT+CGG | - | chr3.4:81550019-81550038 | MS.gene013784:intron | 35.0% |
| AAAGTCAGGAAAAGCAGGAA+GGG | + | chr3.4:81550070-81550089 | None:intergenic | 40.0% | |
| AAGAATATCCAAGAAGCTGG+GGG | - | chr3.4:81550380-81550399 | MS.gene013784:intron | 40.0% | |
| AAGGATCTGATTTCTGTGTC+TGG | - | chr3.4:81549570-81549589 | MS.gene013784:intron | 40.0% | |
| ACATCCAACGTTTCCTGAAA+TGG | + | chr3.4:81549920-81549939 | None:intergenic | 40.0% | |
| ACCCTAGATTTATAGAGCTC+AGG | + | chr3.4:81547320-81547339 | None:intergenic | 40.0% | |
| AGACACAGAAATCAGATCCT+TGG | + | chr3.4:81549571-81549590 | None:intergenic | 40.0% | |
| AGGAAGAAAAGAGGGGTTTA+GGG | + | chr3.4:81547165-81547184 | None:intergenic | 40.0% | |
| AGGATCTGATTTCTGTGTCT+GGG | - | chr3.4:81549571-81549590 | MS.gene013784:intron | 40.0% | |
| ATACTTGCAGCTTCTTGATG+TGG | - | chr3.4:81551004-81551023 | MS.gene013784:intron | 40.0% | |
| ATCGCGGTATTAACGTTGTT+CGG | - | chr3.4:81547363-81547382 | MS.gene013784:intron | 40.0% | |
| ATTCATCAGCACCATCAACT+AGG | + | chr3.4:81550986-81551005 | None:intergenic | 40.0% | |
| ATTTCATGCCACCTGCAATT+TGG | - | chr3.4:81547661-81547680 | MS.gene013784:intron | 40.0% | |
| CAAAATTGCTAGTTCCCTAG+TGG | + | chr3.4:81548730-81548749 | None:intergenic | 40.0% | |
| CAAGAATATCCAAGAAGCTG+GGG | - | chr3.4:81550379-81550398 | MS.gene013784:intron | 40.0% | |
| CAATAGCCTCAAACAACTGA+AGG | + | chr3.4:81550326-81550345 | None:intergenic | 40.0% | |
| CCAATAACGATAAGCCAAAC+AGG | + | chr3.4:81549782-81549801 | None:intergenic | 40.0% | |
| CCCTAGATTTATAGAGCTCA+GGG | + | chr3.4:81547319-81547338 | None:intergenic | 40.0% | |
| CCCTGAGCTCTATAAATCTA+GGG | - | chr3.4:81547316-81547335 | MS.gene013784:intron | 40.0% | |
| CTCATGATTTCTTCTGTCAG+TGG | + | chr3.4:81548230-81548249 | None:intergenic | 40.0% | |
| CTTAATGCTAGTGATGATCG+CGG | - | chr3.4:81547347-81547366 | MS.gene013784:intron | 40.0% | |
| CTTCAAGGTGTGCAAAATTC+AGG | - | chr3.4:81548198-81548217 | MS.gene013784:intron | 40.0% | |
| CTTCTTAAAGCATGCAGAAG+TGG | - | chr3.4:81550135-81550154 | MS.gene013784:intron | 40.0% | |
| GAACCTTAGAGCTTATATGG+CGG | - | chr3.4:81548306-81548325 | MS.gene013784:intron | 40.0% | |
| GCAAGAATATCCAAGAAGCT+GGG | - | chr3.4:81550378-81550397 | MS.gene013784:intron | 40.0% | |
| GCATTCTGTAACCAAATTGC+AGG | + | chr3.4:81547675-81547694 | None:intergenic | 40.0% | |
| GCTTTATGTAACATGCCAGA+AGG | - | chr3.4:81551044-81551063 | MS.gene013784:CDS | 40.0% | |
| GGGGTTGCTTATGCTTAAAA+TGG | - | chr3.4:81549064-81549083 | MS.gene013784:intron | 40.0% | |
| GGTTCACACTCAGCTTATAT+GGG | - | chr3.4:81549092-81549111 | MS.gene013784:intron | 40.0% | |
| GTACTCGAACTACTTCTTCT+TGG | + | chr3.4:81547089-81547108 | None:intergenic | 40.0% | |
| GTCTGCAAGCCTAATTAAGT+TGG | - | chr3.4:81550924-81550943 | MS.gene013784:CDS | 40.0% | |
| TAGGAAGAAAAGAGGGGTTT+AGG | + | chr3.4:81547166-81547185 | None:intergenic | 40.0% | |
| TGGATCTTCCATTTCTTCCA+AGG | - | chr3.4:81549551-81549570 | MS.gene013784:CDS | 40.0% | |
| TGGTTCACACTCAGCTTATA+TGG | - | chr3.4:81549091-81549110 | MS.gene013784:intron | 40.0% | |
| TTCTGTAACCAAATTGCAGG+TGG | + | chr3.4:81547672-81547691 | None:intergenic | 40.0% | |
| TTGAAACCAGATTGTTCCAG+CGG | - | chr3.4:81550098-81550117 | MS.gene013784:intron | 40.0% | |
| TTGGACGGCTGAAACAAATT+GGG | + | chr3.4:81547044-81547063 | None:intergenic | 40.0% | |
| TTTCTCAAGGAGATCTTCGT+CGG | - | chr3.4:81548441-81548460 | MS.gene013784:CDS | 40.0% | |
| TTTGGACGGCTGAAACAAAT+TGG | + | chr3.4:81547045-81547064 | None:intergenic | 40.0% | |
| ! | AAAAAAGAATGAGGGCATGC+TGG | + | chr3.4:81548852-81548871 | None:intergenic | 40.0% |
| ! | ACATACATATTGGGCTAGAG+GGG | - | chr3.4:81549045-81549064 | MS.gene013784:intron | 40.0% |
| ! | AGGGGTTTAGGGTTTAGAAA+TGG | + | chr3.4:81547154-81547173 | None:intergenic | 40.0% |
| ! | CCTGTTTGGCTTATCGTTAT+TGG | - | chr3.4:81549779-81549798 | MS.gene013784:CDS | 40.0% |
| ! | GAATCAAAGAGTGTGTGTTG+AGG | + | chr3.4:81547196-81547215 | None:intergenic | 40.0% |
| ! | GTACATACATATTGGGCTAG+AGG | - | chr3.4:81549043-81549062 | MS.gene013784:intron | 40.0% |
| ! | TATGCCATTTCAGGAAACGT+TGG | - | chr3.4:81549913-81549932 | MS.gene013784:intron | 40.0% |
| ! | TATTTTCGAAAGGAAGGAGC+AGG | + | chr3.4:81549202-81549221 | None:intergenic | 40.0% |
| !! | AAGTGAAGGAAAAGGTGTTG+AGG | + | chr3.4:81550455-81550474 | None:intergenic | 40.0% |
| !! | ACTTGTCGCTTTCAAGAGTT+AGG | - | chr3.4:81550839-81550858 | MS.gene013784:intron | 40.0% |
| !!! | CTTGTTTTGCCAGTTTCATC+TGG | - | chr3.4:81550236-81550255 | MS.gene013784:intron | 40.0% |
| AGCAGGAAGGGAGAAAAATG+TGG | + | chr3.4:81550058-81550077 | None:intergenic | 45.0% | |
| AGGAATCTACCTTGATGCTG+AGG | - | chr3.4:81548280-81548299 | MS.gene013784:intron | 45.0% | |
| AGTCTCTCAGATGCTAACTC+AGG | - | chr3.4:81550212-81550231 | MS.gene013784:intron | 45.0% | |
| ATAAAAACAGAACAGGCGGC+AGG | + | chr3.4:81549616-81549635 | None:intergenic | 45.0% | |
| ATCTACCTTGATGCTGAGGT+AGG | - | chr3.4:81548284-81548303 | MS.gene013784:intron | 45.0% | |
| CCACTGCATCAACTTTCCAT+TGG | + | chr3.4:81548905-81548924 | None:intergenic | 45.0% | |
| CGACATATCAGATGAGCAGA+AGG | - | chr3.4:81550356-81550375 | MS.gene013784:intron | 45.0% | |
| CGTTTCCTGAAATGGCATAC+AGG | + | chr3.4:81549912-81549931 | None:intergenic | 45.0% | |
| GAAAGTCAGGAAAAGCAGGA+AGG | + | chr3.4:81550071-81550090 | None:intergenic | 45.0% | |
| GAATTGCAGTGCCTAGTTGA+TGG | - | chr3.4:81550972-81550991 | MS.gene013784:intron | 45.0% | |
| GCCCTGAGCTCTATAAATCT+AGG | - | chr3.4:81547315-81547334 | MS.gene013784:intron | 45.0% | |
| GCTACGTCTTTCACTTGCTT+TGG | + | chr3.4:81547063-81547082 | None:intergenic | 45.0% | |
| GGATCTGATTTCTGTGTCTG+GGG | - | chr3.4:81549572-81549591 | MS.gene013784:intron | 45.0% | |
| GGCAAGAATATCCAAGAAGC+TGG | - | chr3.4:81550377-81550396 | MS.gene013784:intron | 45.0% | |
| GGTTACAGAATGCACTAAGG+CGG | - | chr3.4:81547682-81547701 | MS.gene013784:intron | 45.0% | |
| TCGGGCTATAACATACTTGC+AGG | - | chr3.4:81548460-81548479 | MS.gene013784:intron | 45.0% | |
| TGAGTTAGCATCTGAGAGAC+TGG | + | chr3.4:81550213-81550232 | None:intergenic | 45.0% | |
| TGGACGGCTGAAACAAATTG+GGG | + | chr3.4:81547043-81547062 | None:intergenic | 45.0% | |
| TTCAATGACAGAAGATGCCC+AGG | - | chr3.4:81547589-81547608 | MS.gene013784:CDS | 45.0% | |
| TTCTCAAGGAGATCTTCGTC+GGG | - | chr3.4:81548442-81548461 | MS.gene013784:CDS | 45.0% | |
| TTTGCACACCTTGAAGCAAG+TGG | + | chr3.4:81548194-81548213 | None:intergenic | 45.0% | |
| ! | AGTAGTGGTTTTTCCAGTGC+CGG | + | chr3.4:81547267-81547286 | None:intergenic | 45.0% |
| ! | CATTCAGAGCACTCAACCAT+GGG | - | chr3.4:81546926-81546945 | MS.gene013784:CDS | 45.0% |
| ! | CCAGAAGGATTTGCTTACGA+GGG | - | chr3.4:81551059-81551078 | MS.gene013784:CDS | 45.0% |
| ! | CGTCTTTCACTTGCTTTGGA+CGG | + | chr3.4:81547059-81547078 | None:intergenic | 45.0% |
| ! | GAAGGTGTGAGTTACCTGTT+TGG | - | chr3.4:81549765-81549784 | MS.gene013784:CDS | 45.0% |
| ! | GACCATAGAAGAGCATGTGT+GGG | + | chr3.4:81547241-81547260 | None:intergenic | 45.0% |
| ! | GGTTACTATTTCTCGACCCA+TGG | + | chr3.4:81546945-81546964 | None:intergenic | 45.0% |
| ! | GGTTGAGTGCTCTGAATGAT+TGG | + | chr3.4:81546924-81546943 | None:intergenic | 45.0% |
| ! | TCATTCAGAGCACTCAACCA+TGG | - | chr3.4:81546925-81546944 | MS.gene013784:CDS | 45.0% |
| !! | CCAATGGAAAGTTGATGCAG+TGG | - | chr3.4:81548902-81548921 | MS.gene013784:intron | 45.0% |
| !!! | GGCGGCTGTGCTATTTTTAA+TGG | - | chr3.4:81548324-81548343 | MS.gene013784:intron | 45.0% |
| AAACCAGATTGTTCCAGCGG+AGG | - | chr3.4:81550101-81550120 | MS.gene013784:intron | 50.0% | |
| ACTTACGCTTCCGGTTTCGA+GGG | + | chr3.4:81547121-81547140 | None:intergenic | 50.0% | |
| AGGTTCCTACCTCAGCATCA+AGG | + | chr3.4:81548292-81548311 | None:intergenic | 50.0% | |
| ATGCTCTTCTATGGTCCTCC+CGG | - | chr3.4:81547245-81547264 | MS.gene013784:intron | 50.0% | |
| CAGCCGCCATATAAGCTCTA+AGG | + | chr3.4:81548312-81548331 | None:intergenic | 50.0% | |
| CCATATGCGCAGACAAGTGA+AGG | + | chr3.4:81550469-81550488 | None:intergenic | 50.0% | |
| CCCTCGTAAGCAAATCCTTC+TGG | + | chr3.4:81551062-81551081 | None:intergenic | 50.0% | |
| CCTTCACTTGTCTGCGCATA+TGG | - | chr3.4:81550466-81550485 | MS.gene013784:intron | 50.0% | |
| GCGCAGACAAGTGAAGGAAA+AGG | + | chr3.4:81550463-81550482 | None:intergenic | 50.0% | |
| TACTTACGCTTCCGGTTTCG+AGG | + | chr3.4:81547122-81547141 | None:intergenic | 50.0% | |
| TGCCCACACATGCTCTTCTA+TGG | - | chr3.4:81547236-81547255 | MS.gene013784:intron | 50.0% | |
| ! | AAAGCTGATGGGCGATAGCA+AGG | + | chr3.4:81547292-81547311 | None:intergenic | 50.0% |
| ! | AAGCTGATGGGCGATAGCAA+GGG | + | chr3.4:81547291-81547310 | None:intergenic | 50.0% |
| ! | CTGATTTCTGTGTCTGGGGT+AGG | - | chr3.4:81549576-81549595 | MS.gene013784:intron | 50.0% |
| ! | GCCAGAAGGATTTGCTTACG+AGG | - | chr3.4:81551058-81551077 | MS.gene013784:CDS | 50.0% |
| ! | GCTATCGCCCATCAGCTTTT+CGG | - | chr3.4:81547293-81547312 | MS.gene013784:intron | 50.0% |
| ! | GGACCATAGAAGAGCATGTG+TGG | + | chr3.4:81547242-81547261 | None:intergenic | 50.0% |
| ! | GTAGTGGTTTTTCCAGTGCC+GGG | + | chr3.4:81547266-81547285 | None:intergenic | 50.0% |
| ! | TGCAGCCTGTATGCCATTTC+AGG | - | chr3.4:81549904-81549923 | MS.gene013784:intron | 50.0% |
| ATCTGCTTCCCCCAGCTTCT+TGG | + | chr3.4:81550391-81550410 | None:intergenic | 55.0% | |
| CAACCTCCGCTGGAACAATC+TGG | + | chr3.4:81550107-81550126 | None:intergenic | 55.0% | |
| CAGTCTGCGGCTCGCTTATT+TGG | - | chr3.4:81549531-81549550 | MS.gene013784:CDS | 55.0% | |
| CTCACCAACACCCTCGAAAC+CGG | - | chr3.4:81547108-81547127 | MS.gene013784:intron | 55.0% | |
| CTCAGGGCCGAAAAGCTGAT+GGG | + | chr3.4:81547303-81547322 | None:intergenic | 55.0% | |
| GAAGCTGGGGGAAGCAGATA+AGG | - | chr3.4:81550392-81550411 | MS.gene013784:CDS | 55.0% | |
| GAATGCACTAAGGCGGACGA+TGG | - | chr3.4:81547689-81547708 | MS.gene013784:intron | 55.0% | |
| GATTTCGCTGCTGTCGCTGT+CGG | - | chr3.4:81547398-81547417 | MS.gene013784:intron | 55.0% | |
| TGTTCCAGCGGAGGTTGTTG+AGG | - | chr3.4:81550110-81550129 | MS.gene013784:intron | 55.0% | |
| AGTGCCTCAACAACCTCCGC+TGG | + | chr3.4:81550117-81550136 | None:intergenic | 60.0% | |
| GCTCAGGGCCGAAAAGCTGA+TGG | + | chr3.4:81547304-81547323 | None:intergenic | 60.0% | |
| GGCGATAGCAAGGGCAGTAG+TGG | + | chr3.4:81547282-81547301 | None:intergenic | 60.0% | |
| TTCTATGGTCCTCCCGGCAC+TGG | - | chr3.4:81547251-81547270 | MS.gene013784:intron | 60.0% | |
| ! | GCTTCCGGTTTCGAGGGTGT+TGG | + | chr3.4:81547115-81547134 | None:intergenic | 60.0% |
| !! | GTGGTTTTTCCAGTGCCGGG+AGG | + | chr3.4:81547263-81547282 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 81546915 | 81551085 | 81546915 | ID=MS.gene013784 |
| chr3.4 | mRNA | 81546915 | 81551085 | 81546915 | ID=MS.gene013784.t1;Parent=MS.gene013784 |
| chr3.4 | exon | 81551042 | 81551085 | 81551042 | ID=MS.gene013784.t1.exon1;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81551042 | 81551085 | 81551042 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81550866 | 81550944 | 81550866 | ID=MS.gene013784.t1.exon2;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81550866 | 81550944 | 81550866 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81550562 | 81550764 | 81550562 | ID=MS.gene013784.t1.exon3;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81550562 | 81550764 | 81550562 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81550390 | 81550459 | 81550390 | ID=MS.gene013784.t1.exon4;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81550390 | 81550459 | 81550390 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81550237 | 81550310 | 81550237 | ID=MS.gene013784.t1.exon5;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81550237 | 81550310 | 81550237 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81549699 | 81549819 | 81549699 | ID=MS.gene013784.t1.exon6;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81549699 | 81549819 | 81549699 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81549519 | 81549581 | 81549519 | ID=MS.gene013784.t1.exon7;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81549519 | 81549581 | 81549519 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81548407 | 81548466 | 81548407 | ID=MS.gene013784.t1.exon8;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81548407 | 81548466 | 81548407 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81547767 | 81547892 | 81547767 | ID=MS.gene013784.t1.exon9;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81547767 | 81547892 | 81547767 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81547587 | 81547670 | 81547587 | ID=MS.gene013784.t1.exon10;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81547587 | 81547670 | 81547587 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| chr3.4 | exon | 81546915 | 81547019 | 81546915 | ID=MS.gene013784.t1.exon11;Parent=MS.gene013784.t1 |
| chr3.4 | CDS | 81546915 | 81547019 | 81546915 | ID=cds.MS.gene013784.t1;Parent=MS.gene013784.t1 |
| Gene Sequence |
| Protein sequence |
