AlfalfaGEDB | MS.gene016268

M. sativa cultivar XinJiangDaYe / MS.gene016268

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13405.9 PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene016268.t1	XP_003623666.1	97.2	178	5	0	1	178	1	178	8.00E-90	339.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene016268.t1	P43187	59.0	183	64	1	7	178	23	205	5.5e-55	215.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene016268.t1	G7KZ68	97.2	178	5	0	1	178	1	178	5.8e-90	339.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene62689	MS.gene016268	PPI
MS.gene016268	MS.gene58906	PPI
MS.gene016268	MS.gene79028	PPI
MS.gene54637	MS.gene016268	PPI
MS.gene016268	MS.gene92775	PPI
MS.gene016268	MS.gene026940	PPI
MS.gene016268	MS.gene65954	PPI
MS.gene016268	MS.gene80013	PPI
MS.gene05284	MS.gene016268	PPI
MS.gene27529	MS.gene016268	PPI
MS.gene016268	MS.gene066863	PPI
MS.gene016268	MS.gene02545	PPI
MS.gene80011	MS.gene016268	PPI
MS.gene070168	MS.gene016268	PPI
MS.gene016268	MS.gene93763	PPI
MS.gene016268	MS.gene80012	PPI
MS.gene25186	MS.gene016268	PPI
MS.gene016268	MS.gene87673	PPI
MS.gene016268	MS.gene98972	PPI
MS.gene070167	MS.gene016268	PPI
MS.gene016268	MS.gene066862	PPI
MS.gene016268	MS.gene013748	PPI
MS.gene016268	MS.gene015658	PPI
MS.gene040127	MS.gene016268	PPI
MS.gene052672	MS.gene016268	PPI
MS.gene016268	MS.gene026618	PPI
MS.gene016268	MS.gene27529	PPI
MS.gene020515	MS.gene016268	PPI
MS.gene58860	MS.gene016268	PPI
MS.gene83068	MS.gene016268	PPI
MS.gene27516	MS.gene016268	PPI
MS.gene026530	MS.gene016268	PPI
MS.gene92789	MS.gene016268	PPI
MS.gene036930	MS.gene016268	PPI
MS.gene016268	MS.gene03228	PPI
MS.gene016268	MS.gene46237	PPI
MS.gene016268	MS.gene036915	PPI
MS.gene016268	MS.gene94551	PPI
MS.gene016268	MS.gene63000	PPI
MS.gene016268	MS.gene046988	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene016268.t1	MTR_7g074240	97.191	178	5	0	1	178	1	178	5.81e-127	354
MS.gene016268.t1	MTR_4g067270	40.523	153	81	2	25	177	6	148	1.30e-31	111
MS.gene016268.t1	MTR_4g115170	37.908	153	89	1	25	171	65	217	3.87e-25	97.4
MS.gene016268.t1	MTR_1g046950	37.671	146	81	2	25	170	5	140	9.21e-23	89.0
MS.gene016268.t1	MTR_3g088655	35.185	162	93	4	20	175	4	159	1.12e-22	89.0
MS.gene016268.t1	MTR_7g089760	35.948	153	88	1	25	177	6	148	3.30e-22	87.8
MS.gene016268.t1	MTR_3g067610	36.301	146	77	2	25	170	6	135	5.21e-22	86.7
MS.gene016268.t1	MTR_2g098890	35.088	171	98	2	6	171	41	203	8.73e-22	88.2
MS.gene016268.t1	MTR_1g030440	33.758	157	96	2	20	176	18	166	3.59e-21	85.5
MS.gene016268.t1	MTR_1g047100	36.486	148	83	3	25	172	5	141	1.01e-20	83.6
MS.gene016268.t1	MTR_7g075040	37.255	153	89	4	22	172	45	192	2.79e-20	84.0
MS.gene016268.t1	MTR_1g041285	37.333	150	82	2	23	172	11	148	4.16e-20	82.0
MS.gene016268.t1	MTR_1g076650	38.255	149	78	3	25	172	13	148	6.18e-20	81.6
MS.gene016268.t1	MTR_5g079340	36.301	146	80	3	25	170	5	137	2.00e-19	80.1
MS.gene016268.t1	MTR_8g036075	38.462	156	88	4	18	171	43	192	2.57e-19	81.3
MS.gene016268.t1	MTR_1g032070	34.483	174	92	4	7	170	19	180	6.05e-18	77.8
MS.gene016268.t1	MTR_4g103630	32.667	150	88	2	21	170	3	139	2.00e-17	75.1
MS.gene016268.t1	MTR_8g105230	32.680	153	91	3	15	167	27	167	3.47e-17	75.5
MS.gene016268.t1	MTR_4g086260	32.877	146	84	2	25	170	58	189	6.18e-17	75.1
MS.gene016268.t1	MTR_6g023460	32.639	144	84	2	27	170	11	141	1.16e-16	73.2
MS.gene016268.t1	MTR_4g127560	54.545	66	30	0	106	171	129	194	2.92e-16	73.2
MS.gene016268.t1	MTR_3g109320	54.930	71	32	0	100	170	108	178	3.55e-16	72.8
MS.gene016268.t1	MTR_5g088320	33.333	147	84	3	25	170	13	146	6.89e-16	71.2
MS.gene016268.t1	MTR_6g025320	33.333	147	84	3	25	170	13	146	7.58e-16	71.2
MS.gene016268.t1	MTR_4g103650	32.432	148	87	2	23	170	1	135	8.80e-16	70.5
MS.gene016268.t1	MTR_4g103655	32.000	150	89	2	21	170	3	139	9.15e-16	70.5
MS.gene016268.t1	MTR_3g089090	32.857	140	81	2	32	171	13	139	1.69e-15	69.7
MS.gene016268.t1	MTR_3g089070	32.857	140	81	2	32	171	14	140	1.94e-15	69.7
MS.gene016268.t1	MTR_7g087610	33.333	147	84	3	25	170	13	146	2.25e-15	69.7
MS.gene016268.t1	MTR_5g008705	32.394	142	84	3	31	172	1	130	3.63e-15	68.9
MS.gene016268.t1	MTR_5g025690	53.846	65	30	0	106	170	131	195	4.60e-15	70.1
MS.gene016268.t1	MTR_6g079570	31.646	158	92	4	25	178	27	172	1.94e-14	67.8
MS.gene016268.t1	MTR_8g107110	31.818	154	92	3	25	178	25	165	2.30e-14	67.4
MS.gene016268.t1	MTR_1g071150	35.211	142	79	2	29	170	17	145	2.82e-14	67.0
MS.gene016268.t1	MTR_7g011010	49.231	65	33	0	106	170	133	197	5.11e-14	67.4
MS.gene016268.t1	MTR_8g066630	29.870	154	99	3	25	178	18	162	1.05e-13	65.9
MS.gene016268.t1	MTR_5g017510	30.460	174	86	6	12	170	29	182	1.55e-13	65.9
MS.gene016268.t1	MTR_5g017560	30.460	174	86	6	12	170	29	182	1.55e-13	65.9
MS.gene016268.t1	MTR_7g074020	28.667	150	93	3	25	173	31	167	2.93e-13	64.7
MS.gene016268.t1	MTR_1g096490	31.293	147	86	2	25	171	336	467	1.44e-12	65.1
MS.gene016268.t1	MTR_7g090450	32.877	146	91	2	25	170	74	212	2.25e-12	63.2
MS.gene016268.t1	MTR_3g051770	26.974	152	96	2	25	172	389	529	3.89e-12	63.9
MS.gene016268.t1	MTR_4g107490	31.788	151	88	4	25	174	379	515	3.96e-12	63.9
MS.gene016268.t1	MTR_3g098090	27.211	147	92	2	25	171	338	469	5.80e-12	63.5
MS.gene016268.t1	MTR_1g026190	27.152	151	96	2	25	175	388	524	6.14e-12	63.5
MS.gene016268.t1	MTR_0028s0170	26.531	147	94	2	25	171	384	516	7.16e-12	63.2
MS.gene016268.t1	MTR_4g112460	32.667	150	85	5	24	170	11	147	7.92e-12	60.8
MS.gene016268.t1	MTR_4g132070	27.027	148	94	2	25	172	397	530	8.85e-12	62.8
MS.gene016268.t1	MTR_6g007613	25.568	176	111	4	6	174	5	167	1.01e-11	60.5
MS.gene016268.t1	MTR_1g054865	29.333	150	89	3	25	173	467	600	1.40e-11	62.4
MS.gene016268.t1	MTR_3g110008	49.296	71	36	0	100	170	108	178	1.54e-11	60.5
MS.gene016268.t1	MTR_3g083470	36.458	96	49	3	75	170	134	217	1.60e-11	61.2
MS.gene016268.t1	MTR_3g098070	27.211	147	92	2	25	171	335	466	1.91e-11	62.0
MS.gene016268.t1	MTR_5g092810	26.351	148	95	2	25	172	398	531	2.05e-11	62.0
MS.gene016268.t1	MTR_8g099095	29.932	147	89	3	25	171	372	504	2.57e-11	61.6
MS.gene016268.t1	MTR_5g089320	26.027	146	94	2	25	170	374	505	2.98e-11	61.2
MS.gene016268.t1	MTR_5g017550	29.444	180	95	7	7	170	18	181	4.72e-11	59.3
MS.gene016268.t1	MTR_1g055255	28.767	146	89	2	25	170	430	560	7.45e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene016268.t1	AT4G20780	59.887	177	63	3	10	178	15	191	7.37e-69	207
MS.gene016268.t1	AT5G44460	58.140	172	72	0	6	177	10	181	3.16e-66	201
MS.gene016268.t1	AT2G43290	39.506	162	93	1	17	178	58	214	5.42e-34	119
MS.gene016268.t1	AT1G05990	38.158	152	85	1	20	171	1	143	2.60e-27	100
MS.gene016268.t1	AT3G59440	36.025	161	92	1	17	177	44	193	6.60e-27	100
MS.gene016268.t1	AT4G03290	36.478	159	94	1	20	178	1	152	1.00e-25	97.1
MS.gene016268.t1	AT3G07490	36.184	152	87	1	20	171	1	142	1.87e-23	90.9
MS.gene016268.t1	AT1G66400	36.986	146	82	2	25	170	16	151	9.21e-23	89.4
MS.gene016268.t1	AT4G12860	34.641	153	90	1	25	177	6	148	2.64e-21	85.5
MS.gene016268.t1	AT5G37770	36.486	148	82	3	25	170	18	155	2.83e-21	85.5
MS.gene016268.t1	AT5G37770	36.486	148	82	3	25	170	18	155	2.83e-21	85.5
MS.gene016268.t1	AT1G24620	35.032	157	90	2	14	170	27	171	1.36e-17	76.6
MS.gene016268.t1	AT3G22930	34.459	148	85	2	23	170	34	169	3.17e-17	75.5
MS.gene016268.t1	AT1G18530	32.468	154	90	3	24	175	7	148	1.06e-16	73.6
MS.gene016268.t1	AT4G14640	34.694	147	84	2	24	170	13	147	1.22e-16	73.2
MS.gene016268.t1	AT5G37780	33.333	147	84	3	25	170	13	146	1.82e-16	72.8
MS.gene016268.t1	AT1G66410	33.333	147	84	3	25	170	13	146	1.82e-16	72.8
MS.gene016268.t1	AT5G42380	32.895	152	91	2	20	171	45	185	2.18e-16	73.6
MS.gene016268.t1	AT1G21550	36.184	152	81	4	25	170	11	152	3.73e-16	72.0
MS.gene016268.t1	AT2G27030	34.694	147	82	4	25	170	13	146	6.46e-16	72.0
MS.gene016268.t1	AT3G43810	34.211	152	86	4	25	175	13	151	6.67e-16	72.8
MS.gene016268.t1	AT3G43810	33.333	147	84	3	25	170	13	146	7.94e-16	71.2
MS.gene016268.t1	AT3G56800	33.333	147	84	3	25	170	13	146	1.02e-15	70.9
MS.gene016268.t1	AT2G27030	33.333	147	84	3	25	170	13	146	1.02e-15	70.9
MS.gene016268.t1	AT2G41110	33.333	147	84	3	25	170	13	146	1.02e-15	70.9
MS.gene016268.t1	AT5G21274	33.333	147	84	3	25	170	13	146	1.30e-15	70.5
MS.gene016268.t1	AT1G73630	28.488	172	103	5	1	172	1	152	1.50e-15	70.9
MS.gene016268.t1	AT1G18210	31.210	157	78	4	21	170	20	153	2.17e-15	70.5
MS.gene016268.t1	AT1G18210	31.210	157	78	4	21	170	20	153	2.17e-15	70.5
MS.gene016268.t1	AT4G37010	29.412	170	104	5	6	174	11	165	3.48e-15	69.7
MS.gene016268.t1	AT4G37010	29.412	170	104	5	6	174	15	169	4.15e-15	69.7
MS.gene016268.t1	AT5G17470	30.667	150	94	2	23	172	1	140	5.24e-15	68.9
MS.gene016268.t1	AT2G15680	31.126	151	90	2	25	175	51	187	5.93e-15	69.7
MS.gene016268.t1	AT3G29000	47.297	74	39	0	100	173	119	192	6.86e-15	69.7
MS.gene016268.t1	AT3G51920	29.577	142	88	2	29	170	17	146	9.79e-15	68.2
MS.gene016268.t1	AT1G32250	29.333	150	100	3	25	174	17	160	2.87e-14	67.4
MS.gene016268.t1	AT2G36180	31.373	153	94	3	25	176	1	143	3.24e-13	63.9
MS.gene016268.t1	AT2G41110	30.380	158	86	3	25	170	13	158	3.34e-13	64.3
MS.gene016268.t1	AT1G35670	30.612	147	87	2	25	171	332	463	4.45e-13	66.6
MS.gene016268.t1	AT5G37780	31.481	162	82	5	25	170	13	161	4.54e-13	64.3
MS.gene016268.t1	AT3G50360	26.786	168	107	4	8	174	13	165	5.83e-13	63.9
MS.gene016268.t1	AT2G38910	29.530	149	90	3	25	173	440	573	6.82e-13	66.2
MS.gene016268.t1	AT5G19360	28.571	147	91	2	25	171	374	506	7.96e-13	65.9
MS.gene016268.t1	AT4G04695	27.333	150	91	4	25	172	337	470	1.21e-12	65.5
MS.gene016268.t1	AT3G50770	32.484	157	97	4	15	170	55	203	1.48e-12	63.5
MS.gene016268.t1	AT5G39670	45.070	71	39	0	100	170	129	199	1.50e-12	63.5
MS.gene016268.t1	AT5G12180	28.571	147	91	2	25	171	379	511	1.53e-12	65.1
MS.gene016268.t1	AT2G31500	33.140	172	92	6	11	174	355	511	2.11e-12	64.7
MS.gene016268.t1	AT4G09570	29.932	147	88	2	25	171	331	462	2.67e-12	64.3
MS.gene016268.t1	AT1G50700	29.530	149	89	3	25	172	379	512	3.64e-12	63.9
MS.gene016268.t1	AT4G04700	28.105	153	90	4	25	174	337	472	5.53e-12	63.5
MS.gene016268.t1	AT3G51850	29.333	150	93	2	25	174	360	496	5.66e-12	63.5
MS.gene016268.t1	AT3G20410	28.378	148	92	2	25	172	397	530	9.02e-12	63.2
MS.gene016268.t1	AT3G20410	28.378	148	92	2	25	172	397	530	9.02e-12	63.2
MS.gene016268.t1	AT4G04710	26.531	147	94	2	25	171	338	470	1.25e-11	62.4
MS.gene016268.t1	AT4G04710	26.531	147	94	2	25	171	324	456	1.44e-11	62.4
MS.gene016268.t1	AT4G04710	26.531	147	94	2	25	171	351	483	1.49e-11	62.4
MS.gene016268.t1	AT4G14640	34.351	131	74	2	40	170	11	129	2.92e-11	58.5
MS.gene016268.t1	AT5G37780	34.091	132	73	4	40	170	15	133	3.37e-11	58.5
MS.gene016268.t1	AT1G66410	32.576	132	75	3	40	170	38	156	4.38e-11	58.9
MS.gene016268.t1	AT1G76650	29.932	147	90	2	25	171	44	177	4.49e-11	58.9
MS.gene016268.t1	AT1G76650	29.932	147	90	2	25	171	44	177	4.49e-11	58.9
MS.gene016268.t1	AT1G76640	30.612	147	92	3	25	171	23	159	5.06e-11	58.5
MS.gene016268.t1	AT5G37780	28.324	173	84	4	25	170	13	172	5.68e-11	58.9
MS.gene016268.t1	AT3G25600	27.273	154	98	3	24	175	12	153	5.94e-11	58.5
MS.gene016268.t1	AT3G22930	33.019	106	61	1	23	128	34	129	6.12e-11	57.8
MS.gene016268.t1	AT2G41100	30.405	148	94	2	26	166	68	213	7.60e-11	59.7
MS.gene016268.t1	AT2G41100	30.405	148	94	2	26	166	68	213	7.60e-11	59.7
MS.gene016268.t1	AT2G41100	30.405	148	94	2	26	166	68	213	7.60e-11	59.7
MS.gene016268.t1	AT2G41100	30.405	148	94	2	26	166	103	248	9.06e-11	59.7
MS.gene016268.t1	AT2G41100	30.405	148	94	2	26	166	103	248	9.06e-11	59.7
MS.gene016268.t1	AT5G04870	26.974	152	96	3	25	176	456	592	9.43e-11	60.1

Find 40 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAACACAAAATGAAGATCTA+TGG	0.299563	7.1:+28590539	MS.gene016268:CDS
AAGGAATTGCAAGTTGTGTT+AGG	0.304824	7.1:+28590610	MS.gene016268:CDS
ACGACTTTGATGGCGATGAT+AGG	0.357282	7.1:-28589584	None:intergenic
TATCAAACATGTCAAAGATT+CGG	0.393122	7.1:-28589647	None:intergenic
CGAAGCCGAAACGACTTTGA+TGG	0.412298	7.1:-28589594	None:intergenic
AACGTTAGTCCTACGTTGCC+CGG	0.415367	7.1:-28590445	None:intergenic
CAAGTTGTGTTAGGGAAGCT+TGG	0.430185	7.1:+28590619	MS.gene016268:CDS
ATCCCAACAGGTTGAGTGCC+TGG	0.433010	7.1:-28589707	None:intergenic
GGCACTCAACCTGTTGGGAT+TGG	0.441315	7.1:+28589710	MS.gene016268:CDS
CATCGCCATCAAAGTCGTTT+CGG	0.444047	7.1:+28589589	MS.gene016268:CDS
AGATCTATGGGAAGCATTCA+AGG	0.473196	7.1:+28590552	MS.gene016268:CDS
AGCCAGGCACTCAACCTGTT+GGG	0.479681	7.1:+28589705	MS.gene016268:CDS
AGGAATTGCAAGTTGTGTTA+GGG	0.482752	7.1:+28590611	MS.gene016268:CDS
ACTCAGCTTCCAATCCCAAC+AGG	0.496186	7.1:-28589719	None:intergenic
GTGGGATTGCACGAGTCACT+CGG	0.508962	7.1:+28590478	MS.gene016268:CDS
AACACAAAATGAAGATCTAT+GGG	0.513461	7.1:+28590540	MS.gene016268:CDS
TTCAAGGTGTTTGATGAAGA+TGG	0.525519	7.1:+28590568	MS.gene016268:CDS
GGGAAGCTTGGACTTGTGGA+AGG	0.530012	7.1:+28590631	MS.gene016268:CDS
TGGGATTGCACGAGTCACTC+GGG	0.531342	7.1:+28590479	MS.gene016268:CDS
TGGCAGGTCATACATAAAGC+CGG	0.534241	7.1:+28590426	MS.gene016268:intron
TGTCAAAGATTCGGCGCAGA+CGG	0.537206	7.1:-28589638	None:intergenic
AAGCCAGGCACTCAACCTGT+TGG	0.541449	7.1:+28589704	MS.gene016268:CDS
AACTGTGGAGGAAATAAGCC+AGG	0.544640	7.1:+28589689	MS.gene016268:CDS
ACTAACGTTCGAAGATTTCG+TGG	0.554805	7.1:+28590459	MS.gene016268:CDS
GGCAGGTCATACATAAAGCC+GGG	0.555773	7.1:+28590427	MS.gene016268:intron
GTTAGGGAAGCTTGGACTTG+TGG	0.573473	7.1:+28590627	MS.gene016268:CDS
GAAAATCAACACGACCATCA+TGG	0.580986	7.1:-28590702	None:intergenic
ATCAACACGACCATCATGGT+TGG	0.596881	7.1:-28590698	None:intergenic
TACATAAAGCCGGGCAACGT+AGG	0.604345	7.1:+28590436	MS.gene016268:CDS
GGAAGCTTGGACTTGTGGAA+GGG	0.609692	7.1:+28590632	MS.gene016268:CDS
CTAACGTTCGAAGATTTCGT+GGG	0.609721	7.1:+28590460	MS.gene016268:CDS
TGATGGTTACATATCAGCTA+AGG	0.610274	7.1:+28590591	MS.gene016268:CDS
TCTGTTGATACCAACCATGA+TGG	0.617665	7.1:+28590688	MS.gene016268:CDS
GTGTTTGATGAAGATGGTGA+TGG	0.643172	7.1:+28590574	MS.gene016268:CDS
ATTGGAAGCTGAGTTCAAAG+AGG	0.651083	7.1:+28589728	MS.gene016268:CDS
TCAAGAGCTAGAGACAGTAG+TGG	0.680719	7.1:-28590749	None:intergenic
GGGATTGCACGAGTCACTCG+GGG	0.694633	7.1:+28590480	MS.gene016268:CDS
TGGTGATTCAATGATAACTG+TGG	0.697939	7.1:+28589674	MS.gene016268:CDS
AGTGTCCTCAGAAAATGATG+AGG	0.701725	7.1:+28590516	MS.gene016268:CDS
TGATTCAATGATAACTGTGG+AGG	0.720711	7.1:+28589677	MS.gene016268:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTAAAATCTTATATTACAA+CGG	-	chr7.1:28590279-28590298	None:intergenic	15.0%
!!!	TTCAAAATCATTCTAATTTT+TGG	+	chr7.1:28590029-28590048	MS.gene016268:intron	15.0%
!!!	TTTTTAATTCATACTTCTAA+TGG	+	chr7.1:28589815-28589834	MS.gene016268:intron	15.0%
!!	ATATTAATAAAAATTGTGGC+AGG	+	chr7.1:28590410-28590429	MS.gene016268:intron	20.0%
!!	GTTGAATATAATGATTTCTA+AGG	+	chr7.1:28590074-28590093	MS.gene016268:intron	20.0%
!!	TATAGTTATGAGTAAATGAA+AGG	-	chr7.1:28589789-28589808	None:intergenic	20.0%
!!	TTTGACATGTTTGATAAAAA+TGG	+	chr7.1:28589654-28589673	MS.gene016268:CDS	20.0%
!!!	ATTAGAATGATTTTGAATTG+TGG	-	chr7.1:28590026-28590045	None:intergenic	20.0%
!!!	TGTTGATTTTCATGAATTTA+AGG	+	chr7.1:28590714-28590733	MS.gene016268:CDS	20.0%
!!!	TTTTTAATTCATGCTTCTAT+TGG	-	chr7.1:28589855-28589874	None:intergenic	20.0%
!	AAACACAAAATGAAGATCTA+TGG	+	chr7.1:28590539-28590558	MS.gene016268:CDS	25.0%
!	AACACAAAATGAAGATCTAT+GGG	+	chr7.1:28590540-28590559	MS.gene016268:CDS	25.0%
!	TATCAAACATGTCAAAGATT+CGG	-	chr7.1:28589650-28589669	None:intergenic	25.0%
!!	ACGAAGTATTTAAATAGTAG+TGG	-	chr7.1:28590336-28590355	None:intergenic	25.0%
!!	CGGTAATATAAAGAATTTTG+AGG	-	chr7.1:28590259-28590278	None:intergenic	25.0%
	AACCACTTGTAATTGAGATT+AGG	-	chr7.1:28590057-28590076	None:intergenic	30.0%
	ACCACTTGTAATTGAGATTA+GGG	-	chr7.1:28590056-28590075	None:intergenic	30.0%
	CTTATATCGCTGTAAAAAAG+TGG	+	chr7.1:28590203-28590222	MS.gene016268:intron	30.0%
	CTTCTAATGGTTTCAAATTG+CGG	+	chr7.1:28589828-28589847	MS.gene016268:intron	30.0%
	TTATGAGTAAATGAAAGGTG+TGG	-	chr7.1:28589784-28589803	None:intergenic	30.0%
!	AAGGTCTACAAATGCAATTT+TGG	+	chr7.1:28590093-28590112	MS.gene016268:intron	30.0%
!!!	CACTTTTTTACAGCGATATA+AGG	-	chr7.1:28590205-28590224	None:intergenic	30.0%
	AAGGAATTGCAAGTTGTGTT+AGG	+	chr7.1:28590610-28590629	MS.gene016268:CDS	35.0%
	ACAGCGATTTATAATCTTGG+TGG	-	chr7.1:28590165-28590184	None:intergenic	35.0%
	ACGACAGCGATTTATAATCT+TGG	-	chr7.1:28590168-28590187	None:intergenic	35.0%
	AGGAATTGCAAGTTGTGTTA+GGG	+	chr7.1:28590611-28590630	MS.gene016268:CDS	35.0%
	CATCACAACAACTACAATGA+TGG	+	chr7.1:28589976-28589995	MS.gene016268:intron	35.0%
	GAGAAAATACGTGATATGTG+AGG	+	chr7.1:28589889-28589908	MS.gene016268:intron	35.0%
	TCCCTAATCTCAATTACAAG+TGG	+	chr7.1:28590052-28590071	MS.gene016268:intron	35.0%
	TGATGGTTACATATCAGCTA+AGG	+	chr7.1:28590591-28590610	MS.gene016268:CDS	35.0%
	TGATTCAATGATAACTGTGG+AGG	+	chr7.1:28589677-28589696	MS.gene016268:CDS	35.0%
	TGGTGATTCAATGATAACTG+TGG	+	chr7.1:28589674-28589693	MS.gene016268:CDS	35.0%
!	TGTTTCCTCATCATTTTCTG+AGG	-	chr7.1:28590524-28590543	None:intergenic	35.0%
!	TTCAAGGTGTTTGATGAAGA+TGG	+	chr7.1:28590568-28590587	MS.gene016268:CDS	35.0%
	ACTAACGTTCGAAGATTTCG+TGG	+	chr7.1:28590459-28590478	MS.gene016268:CDS	40.0%
	AGTGTCCTCAGAAAATGATG+AGG	+	chr7.1:28590516-28590535	MS.gene016268:CDS	40.0%
	ATTGGAAGCTGAGTTCAAAG+AGG	+	chr7.1:28589728-28589747	MS.gene016268:CDS	40.0%
	CTAACGTTCGAAGATTTCGT+GGG	+	chr7.1:28590460-28590479	MS.gene016268:CDS	40.0%
	GAAAATCAACACGACCATCA+TGG	-	chr7.1:28590705-28590724	None:intergenic	40.0%
	GTGTTTGATGAAGATGGTGA+TGG	+	chr7.1:28590574-28590593	MS.gene016268:CDS	40.0%
	TACAATGATGGCAATCGTAG+TGG	+	chr7.1:28589988-28590007	MS.gene016268:intron	40.0%
	TCGCTGTCGTAATTATGCTA+TGG	+	chr7.1:28590178-28590197	MS.gene016268:intron	40.0%
	TCTGTTGATACCAACCATGA+TGG	+	chr7.1:28590688-28590707	MS.gene016268:CDS	40.0%
!	GGTGGTCGTAATTGTTGTTA+AGG	-	chr7.1:28590147-28590166	None:intergenic	40.0%
!!	AGATCTATGGGAAGCATTCA+AGG	+	chr7.1:28590552-28590571	MS.gene016268:CDS	40.0%
	AACTGTGGAGGAAATAAGCC+AGG	+	chr7.1:28589689-28589708	MS.gene016268:CDS	45.0%
	AGGTCTCTCTAACGACATCA+TGG	-	chr7.1:28590239-28590258	None:intergenic	45.0%
	ATCAACACGACCATCATGGT+TGG	-	chr7.1:28590701-28590720	None:intergenic	45.0%
	CAAGTTGTGTTAGGGAAGCT+TGG	+	chr7.1:28590619-28590638	MS.gene016268:CDS	45.0%
	CATCGCCATCAAAGTCGTTT+CGG	+	chr7.1:28589589-28589608	MS.gene016268:CDS	45.0%
	TCAAGAGCTAGAGACAGTAG+TGG	-	chr7.1:28590752-28590771	None:intergenic	45.0%
	TGGCAGGTCATACATAAAGC+CGG	+	chr7.1:28590426-28590445	MS.gene016268:intron	45.0%
!!	ACGACTTTGATGGCGATGAT+AGG	-	chr7.1:28589587-28589606	None:intergenic	45.0%
!!	AAATATATTAATAAAAATTG+TGG	+	chr7.1:28590406-28590425	MS.gene016268:intron	5.0%
	AACGTTAGTCCTACGTTGCC+CGG	-	chr7.1:28590448-28590467	None:intergenic	50.0%
	ACTCAGCTTCCAATCCCAAC+AGG	-	chr7.1:28589722-28589741	None:intergenic	50.0%
	CGAAGCCGAAACGACTTTGA+TGG	-	chr7.1:28589597-28589616	None:intergenic	50.0%
	GGAAGCTTGGACTTGTGGAA+GGG	+	chr7.1:28590632-28590651	MS.gene016268:CDS	50.0%
	GGCAGGTCATACATAAAGCC+GGG	+	chr7.1:28590427-28590446	MS.gene016268:intron	50.0%
	GTTAGGGAAGCTTGGACTTG+TGG	+	chr7.1:28590627-28590646	MS.gene016268:CDS	50.0%
	TACATAAAGCCGGGCAACGT+AGG	+	chr7.1:28590436-28590455	MS.gene016268:CDS	50.0%
	TGTCAAAGATTCGGCGCAGA+CGG	-	chr7.1:28589641-28589660	None:intergenic	50.0%
	AAGCCAGGCACTCAACCTGT+TGG	+	chr7.1:28589704-28589723	MS.gene016268:CDS	55.0%
	AGCCAGGCACTCAACCTGTT+GGG	+	chr7.1:28589705-28589724	MS.gene016268:CDS	55.0%
	GGCACTCAACCTGTTGGGAT+TGG	+	chr7.1:28589710-28589729	MS.gene016268:CDS	55.0%
	GGGAAGCTTGGACTTGTGGA+AGG	+	chr7.1:28590631-28590650	MS.gene016268:CDS	55.0%
	GTGGGATTGCACGAGTCACT+CGG	+	chr7.1:28590478-28590497	MS.gene016268:CDS	55.0%
	TGGGATTGCACGAGTCACTC+GGG	+	chr7.1:28590479-28590498	MS.gene016268:CDS	55.0%
!	ATCCCAACAGGTTGAGTGCC+TGG	-	chr7.1:28589710-28589729	None:intergenic	55.0%
	GGGATTGCACGAGTCACTCG+GGG	+	chr7.1:28590480-28590499	MS.gene016268:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.1	gene	28589570	28590771	28589570	ID=MS.gene016268
chr7.1	mRNA	28589570	28590771	28589570	ID=MS.gene016268.t1;Parent=MS.gene016268
chr7.1	exon	28589570	28589766	28589570	ID=MS.gene016268.t1.exon1;Parent=MS.gene016268.t1
chr7.1	CDS	28589570	28589766	28589570	ID=cds.MS.gene016268.t1;Parent=MS.gene016268.t1
chr7.1	exon	28590432	28590771	28590432	ID=MS.gene016268.t1.exon2;Parent=MS.gene016268.t1
chr7.1	CDS	28590432	28590771	28590432	ID=cds.MS.gene016268.t1;Parent=MS.gene016268.t1

Gene Sequence

>MS.gene016268

ATGGGGGAAATGAACCTATCATCGCCATCAAAGTCGTTTCGGCTTCGAAGTCAGAGTCTCAACTCGCTCCGTCTGCGCCGAATCTTTGACATGTTTGATAAAAATGGTGATTCAATGATAACTGTGGAGGAAATAAGCCAGGCACTCAACCTGTTGGGATTGGAAGCTGAGTTCAAAGAGGTTGATTCAATGATCAAGTGAGTTAGTTCATCCACACCTTTCATTTACTCATAACTATATTCATATTTTTAATTCATACTTCTAATGGTTTCAAATTGCGGACCAATAGAAGCATGAATTAAAAATACGAGACTATAGAGAGAAAATACGTGATATGTGAGGTATATGATAAATAATAATTTTGATGCTAATAAAAATAAATTCACGCTGCAACAATCGCAATACACATCACAACAACTACAATGATGGCAATCGTAGTGGCTGCAACTACAACCACAATTCAAAATCATTCTAATTTTTGGTCCCTAATCTCAATTACAAGTGGTTGAATATAATGATTTCTAAGGTCTACAAATGCAATTTTGGCTGCATTTTGCTTTAATATCAAAATTCACCTTAACAACAATTACGACCACCAAGATTATAAATCGCTGTCGTAATTATGCTATGGACCTTATATCGCTGTAAAAAAGTGGTTGATTGCGACCATGATGTCGTTAGAGAGACCTCAAAATTCTTTATATTACCGTTGTAATATAAGATTTTACAATAATTTGCAACTATAATATAAAGAATTTGTCTTCCACTACTATTTAAATACTTCGTTATTGCTAGTTTCTACAATAATTAGAGTTTGAAATTGAAATTGAAATTGAAAATATATTAATAAAAATTGTGGCAGGTCATACATAAAGCCGGGCAACGTAGGACTAACGTTCGAAGATTTCGTGGGATTGCACGAGTCACTCGGGGATACATATTTTGCAGTGTCCTCAGAAAATGATGAGGAAACACAAAATGAAGATCTATGGGAAGCATTCAAGGTGTTTGATGAAGATGGTGATGGTTACATATCAGCTAAGGAATTGCAAGTTGTGTTAGGGAAGCTTGGACTTGTGGAAGGGAACTTGATTGATAATGTTCAGCGAATGATTTTGTCTGTTGATACCAACCATGATGGTCGTGTTGATTTTCATGAATTTAAGGATATGATGCGCACCACTACTGTCTCTAGCTCTTGA

Protein sequence

>MS.gene016268.t1

MGEMNLSSPSKSFRLRSQSLNSLRLRRIFDMFDKNGDSMITVEEISQALNLLGLEAEFKEVDSMIKSYIKPGNVGLTFEDFVGLHESLGDTYFAVSSENDEETQNEDLWEAFKVFDEDGDGYISAKELQVVLGKLGLVEGNLIDNVQRMILSVDTNHDGRVDFHEFKDMMRTTTVSSS