AlfalfaGEDB | MS.gene05284

M. sativa cultivar XinJiangDaYe / MS.gene05284

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9 PF13833.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05284.t1	XP_013452904.1	93.7	174	11	0	1	174	1	174	1.20E-85	325.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05284.t1	Q9LE22	55.7	149	61	3	15	162	11	155	7.0e-39	161.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05284.t1	A0A072UBH5	93.7	174	11	0	1	174	1	174	8.4e-86	325.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene05284	MS.gene21696	PPI
MS.gene05284	MS.gene29793	PPI
MS.gene05284	MS.gene022456	PPI
MS.gene05284	MS.gene074045	PPI
MS.gene05284	MS.gene85596	PPI
MS.gene05284	MS.gene96922	PPI
MS.gene05284	MS.gene80013	PPI
MS.gene05284	MS.gene64314	PPI
MS.gene05284	MS.gene025777	PPI
MS.gene68345	MS.gene05284	PPI
MS.gene05284	MS.gene94551	PPI
MS.gene001246	MS.gene05284	PPI
MS.gene040127	MS.gene05284	PPI
MS.gene62258	MS.gene05284	PPI
MS.gene05284	MS.gene93087	PPI
MS.gene05284	MS.gene046988	PPI
MS.gene05284	MS.gene074100	PPI
MS.gene000724	MS.gene05284	PPI
MS.gene05284	MS.gene057293	PPI
MS.gene052672	MS.gene05284	PPI
MS.gene05284	MS.gene53650	PPI
MS.gene05284	MS.gene04915	PPI
MS.gene64311	MS.gene05284	PPI
MS.gene05284	MS.gene58906	PPI
MS.gene05284	MS.gene79028	PPI
MS.gene05284	MS.gene64311	PPI
MS.gene05284	MS.gene016268	PPI
MS.gene040331	MS.gene05284	PPI
MS.gene05284	MS.gene053319	PPI
MS.gene05284	MS.gene026940	PPI
MS.gene05284	MS.gene65954	PPI
MS.gene58860	MS.gene05284	PPI
MS.gene83068	MS.gene05284	PPI
MS.gene05284	MS.gene98295	PPI
MS.gene27516	MS.gene05284	PPI
MS.gene04915	MS.gene05284	PPI
MS.gene61009	MS.gene05284	PPI
MS.gene05284	MS.gene28338	PPI
MS.gene64327	MS.gene05284	PPI
MS.gene000738	MS.gene05284	PPI
MS.gene64307	MS.gene05284	PPI
MS.gene05284	MS.gene25186	PPI
MS.gene05284	MS.gene025797	PPI
MS.gene05284	MS.gene21931	PPI
MS.gene04917	MS.gene05284	PPI
MS.gene05284	MS.gene87673	PPI
MS.gene05284	MS.gene53659	PPI
MS.gene05284	MS.gene09960	PPI
MS.gene026530	MS.gene05284	PPI
MS.gene05284	MS.gene061768	PPI
MS.gene05284	MS.gene62540	PPI
MS.gene05284	MS.gene47134	PPI
MS.gene05284	MS.gene017446	PPI
MS.gene05284	MS.gene96914	PPI
MS.gene05284	MS.gene066863	PPI
MS.gene05284	MS.gene066862	PPI
MS.gene05284	MS.gene02545	PPI
MS.gene05284	MS.gene96913	PPI
MS.gene008225	MS.gene05284	PPI
MS.gene05284	MS.gene015658	PPI
MS.gene05284	MS.gene057167	PPI
MS.gene011400	MS.gene05284	PPI
MS.gene05284	MS.gene93763	PPI
MS.gene05284	MS.gene64313	PPI
MS.gene05284	MS.gene80012	PPI
MS.gene05284	MS.gene49270	PPI
MS.gene024717	MS.gene05284	PPI
MS.gene05284	MS.gene024717	PPI
MS.gene05284	MS.gene036930	PPI
MS.gene64313	MS.gene05284	PPI
MS.gene05284	MS.gene21932	PPI
MS.gene05284	MS.gene026618	PPI
MS.gene62689	MS.gene05284	PPI
MS.gene35563	MS.gene05284	PPI
MS.gene97948	MS.gene05284	PPI
MS.gene05284	MS.gene29794	PPI
MS.gene55496	MS.gene05284	PPI
MS.gene003880	MS.gene05284	PPI
MS.gene54637	MS.gene05284	PPI
MS.gene49271	MS.gene05284	PPI
MS.gene05284	MS.gene53648	PPI
MS.gene67281	MS.gene05284	PPI
MS.gene05284	MS.gene008831	PPI
MS.gene05284	MS.gene71511	PPI
MS.gene05284	MS.gene033361	PPI
MS.gene05284	MS.gene056461	PPI
MS.gene062239	MS.gene05284	PPI
MS.gene46886	MS.gene05284	PPI
MS.gene05284	MS.gene98972	PPI
MS.gene92789	MS.gene05284	PPI
MS.gene05284	MS.gene89216	PPI
MS.gene05284	MS.gene35562	PPI
MS.gene05284	MS.gene64308	PPI
MS.gene05284	MS.gene009021	PPI
MS.gene21155	MS.gene05284	PPI
MS.gene05284	MS.gene47195	PPI
MS.gene21932	MS.gene05284	PPI
MS.gene05284	MS.gene060446	PPI
MS.gene05284	MS.gene020515	PPI
MS.gene05284	MS.gene07422	PPI
MS.gene05284	MS.gene013748	PPI
MS.gene056383	MS.gene05284	PPI
MS.gene64324	MS.gene05284	PPI
MS.gene05284	MS.gene64316	PPI
MS.gene022455	MS.gene05284	PPI
MS.gene05284	MS.gene98294	PPI
MS.gene015470	MS.gene05284	PPI
MS.gene05284	MS.gene061261	PPI
MS.gene041795	MS.gene05284	PPI
MS.gene05284	MS.gene03228	PPI
MS.gene22553	MS.gene05284	PPI
MS.gene53662	MS.gene05284	PPI
MS.gene05284	MS.gene46237	PPI
MS.gene05284	MS.gene64317	PPI
MS.gene80011	MS.gene05284	PPI
MS.gene05284	MS.gene036915	PPI
MS.gene070168	MS.gene05284	PPI
MS.gene05284	MS.gene27529	PPI
MS.gene05284	MS.gene55545	PPI
MS.gene05284	MS.gene63000	PPI
MS.gene05284	MS.gene64310	PPI
MS.gene05284	MS.gene29459	PPI
MS.gene038456	MS.gene05284	PPI
MS.gene05284	MS.gene71207	PPI
MS.gene05284	MS.gene92775	PPI
MS.gene05284	MS.gene74452	PPI
MS.gene05284	MS.gene09934	PPI
MS.gene004899	MS.gene05284	PPI
MS.gene05284	MS.gene53662	PPI
MS.gene05284	MS.gene63281	PPI
MS.gene070167	MS.gene05284	PPI
MS.gene05284	MS.gene000724	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05284.t1	MTR_6g079570	93.678	174	11	0	1	174	1	174	4.49e-119	334
MS.gene05284.t1	MTR_8g107110	71.528	144	40	1	17	160	15	157	2.16e-68	205
MS.gene05284.t1	MTR_5g079340	56.934	137	58	1	25	161	3	138	3.18e-46	148
MS.gene05284.t1	MTR_1g047100	50.714	140	66	2	25	162	3	141	6.01e-44	142
MS.gene05284.t1	MTR_1g046950	53.571	140	61	3	25	161	3	141	7.30e-44	142
MS.gene05284.t1	MTR_3g067610	51.429	140	62	3	23	161	2	136	1.94e-42	139
MS.gene05284.t1	MTR_1g032070	47.826	138	68	3	25	160	45	180	1.07e-32	115
MS.gene05284.t1	MTR_8g105230	44.526	137	66	3	26	157	36	167	1.06e-30	110
MS.gene05284.t1	MTR_1g041285	46.763	139	69	4	26	161	12	148	6.54e-30	107
MS.gene05284.t1	MTR_5g008705	45.385	130	69	2	34	162	2	130	8.32e-30	106
MS.gene05284.t1	MTR_1g076650	44.286	140	75	3	26	163	12	150	2.34e-29	105
MS.gene05284.t1	MTR_7g087610	41.007	139	80	2	26	163	12	149	7.74e-29	104
MS.gene05284.t1	MTR_7g087610	41.096	73	43	0	93	165	6	78	3.47e-11	58.5
MS.gene05284.t1	MTR_5g088320	41.727	139	79	2	26	163	12	149	7.82e-29	104
MS.gene05284.t1	MTR_5g088320	41.096	73	43	0	93	165	6	78	3.16e-11	58.9
MS.gene05284.t1	MTR_6g025320	41.727	139	79	2	26	163	12	149	8.00e-29	104
MS.gene05284.t1	MTR_6g025320	41.096	73	43	0	93	165	6	78	2.65e-11	58.9
MS.gene05284.t1	MTR_4g067270	41.667	144	78	4	23	162	2	143	5.33e-28	102
MS.gene05284.t1	MTR_4g115170	40.000	155	73	3	25	160	63	216	8.59e-27	101
MS.gene05284.t1	MTR_5g017510	37.143	140	87	1	25	163	47	186	1.18e-26	100
MS.gene05284.t1	MTR_5g017560	37.143	140	87	1	25	163	47	186	1.18e-26	100
MS.gene05284.t1	MTR_5g008695	46.903	113	56	2	50	159	1	112	1.34e-26	97.8
MS.gene05284.t1	MTR_7g075040	41.611	149	74	4	25	162	46	192	1.59e-26	99.8
MS.gene05284.t1	MTR_4g086260	38.889	144	82	3	24	165	55	194	1.37e-25	97.4
MS.gene05284.t1	MTR_5g017550	36.429	140	87	2	25	163	47	185	4.71e-25	95.9
MS.gene05284.t1	MTR_8g036075	39.865	148	81	3	26	165	49	196	4.87e-25	96.3
MS.gene05284.t1	MTR_7g089760	37.063	143	86	3	23	162	2	143	5.29e-25	94.7
MS.gene05284.t1	MTR_4g103630	38.519	135	82	1	26	160	6	139	3.29e-24	92.4
MS.gene05284.t1	MTR_6g023460	39.394	132	79	1	29	160	11	141	3.74e-24	92.4
MS.gene05284.t1	MTR_4g103650	37.778	135	83	1	26	160	2	135	1.47e-23	90.5
MS.gene05284.t1	MTR_8g066630	33.566	143	90	2	24	162	15	156	1.85e-22	88.6
MS.gene05284.t1	MTR_4g103655	37.037	135	84	1	26	160	6	139	4.89e-22	86.7
MS.gene05284.t1	MTR_3g089090	35.878	131	83	1	30	160	9	138	3.22e-21	84.7
MS.gene05284.t1	MTR_3g089070	35.878	131	83	1	30	160	10	139	3.64e-21	84.3
MS.gene05284.t1	MTR_2g098890	37.063	143	84	3	23	160	61	202	8.58e-21	85.5
MS.gene05284.t1	MTR_7g090450	37.857	140	82	2	26	160	73	212	1.16e-20	85.1
MS.gene05284.t1	MTR_0168s0120	39.474	114	67	2	51	163	1	113	2.23e-20	81.6
MS.gene05284.t1	MTR_6g025320	39.474	114	67	2	51	163	1	113	2.23e-20	81.6
MS.gene05284.t1	MTR_8g078270	36.029	136	85	2	27	161	54	188	4.04e-19	80.5
MS.gene05284.t1	MTR_5g027000	29.747	158	103	3	14	164	4	160	2.85e-18	77.4
MS.gene05284.t1	MTR_3g083470	33.088	136	79	2	26	160	93	217	8.60e-18	77.8
MS.gene05284.t1	MTR_7g115040	37.410	139	84	3	26	162	12	149	9.82e-18	75.9
MS.gene05284.t1	MTR_1g071150	31.618	136	91	2	26	160	12	146	1.65e-17	75.1
MS.gene05284.t1	MTR_5g092810	34.266	143	92	2	23	165	394	534	4.28e-17	78.2
MS.gene05284.t1	MTR_7g091890	36.029	136	86	1	27	162	364	498	1.16e-16	77.0
MS.gene05284.t1	MTR_1g030440	33.766	154	82	5	25	166	21	166	1.53e-15	70.5
MS.gene05284.t1	MTR_4g112460	27.660	141	98	2	24	161	9	148	1.93e-15	70.5
MS.gene05284.t1	MTR_5g011850	33.333	141	84	4	27	163	13	147	2.70e-15	69.3
MS.gene05284.t1	MTR_3g088655	31.293	147	89	3	26	160	8	154	4.32e-15	69.3
MS.gene05284.t1	MTR_3g051770	33.099	142	88	2	27	162	389	529	6.28e-15	72.0
MS.gene05284.t1	MTR_4g132070	34.058	138	89	2	23	160	393	528	6.92e-15	71.6
MS.gene05284.t1	MTR_7g074240	32.075	159	90	5	27	172	25	178	1.00e-14	68.6
MS.gene05284.t1	MTR_8g069915	28.058	139	96	2	26	161	12	149	1.58e-14	67.8
MS.gene05284.t1	MTR_5g009830	34.328	134	86	2	27	160	372	503	1.72e-14	70.5
MS.gene05284.t1	MTR_7g074020	31.973	147	90	3	26	167	30	171	2.86e-14	67.4
MS.gene05284.t1	MTR_1g026190	33.088	136	85	3	27	160	388	519	3.11e-14	70.1
MS.gene05284.t1	MTR_1g041150	32.836	134	87	2	27	160	424	554	4.62e-14	69.3
MS.gene05284.t1	MTR_4g107490	32.624	141	92	3	21	160	373	511	9.66e-14	68.6
MS.gene05284.t1	MTR_1g052530	33.088	136	90	1	27	162	358	492	1.13e-13	68.2
MS.gene05284.t1	MTR_0028s0170	32.090	134	89	2	27	160	384	515	1.72e-13	67.8
MS.gene05284.t1	MTR_6g007613	41.538	65	38	0	100	164	30	94	1.84e-13	64.7
MS.gene05284.t1	MTR_4g132040	32.836	134	88	2	27	160	401	532	2.28e-13	67.4
MS.gene05284.t1	MTR_7g074020	37.838	74	46	0	100	173	31	104	2.45e-13	64.7
MS.gene05284.t1	MTR_7g068710	28.986	138	97	1	23	160	358	494	2.74e-13	67.0
MS.gene05284.t1	MTR_6g007613	41.538	65	38	0	100	164	30	94	3.16e-13	64.7
MS.gene05284.t1	MTR_6g007613	31.429	140	86	3	26	160	29	163	2.51e-12	62.0
MS.gene05284.t1	MTR_8g099095	32.836	134	88	2	27	160	372	503	5.74e-13	66.2
MS.gene05284.t1	MTR_3g055570	33.333	138	77	3	24	161	50	172	6.12e-13	63.9
MS.gene05284.t1	MTR_5g089320	30.597	134	91	2	27	160	374	505	6.98e-13	65.9
MS.gene05284.t1	MTR_3g055510	32.692	104	51	2	56	156	42	129	1.63e-12	62.0
MS.gene05284.t1	MTR_7g106710	32.847	137	83	5	27	160	441	571	2.37e-12	64.7
MS.gene05284.t1	MTR_5g079470	43.478	69	37	1	23	91	7	73	2.67e-12	60.1
MS.gene05284.t1	MTR_3g098090	30.147	136	88	3	27	160	338	468	4.77e-12	63.5
MS.gene05284.t1	MTR_1g054865	32.353	136	85	3	27	160	467	597	4.81e-12	63.5
MS.gene05284.t1	MTR_3g098070	30.147	136	88	3	27	160	335	465	9.47e-12	62.8
MS.gene05284.t1	MTR_1g096490	31.618	136	86	3	27	160	336	466	1.55e-11	62.0
MS.gene05284.t1	MTR_1g055255	32.593	135	86	4	27	160	430	560	1.79e-11	62.0
MS.gene05284.t1	MTR_3g055585	29.323	133	79	1	24	156	50	167	3.71e-11	58.9
MS.gene05284.t1	MTR_8g095440	30.882	136	87	3	27	160	336	466	4.65e-11	60.8
MS.gene05284.t1	MTR_4g066660	30.657	137	93	2	24	160	375	509	6.38e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene05284.t1	AT1G18210	56.081	148	60	3	15	161	11	154	1.46e-52	165
MS.gene05284.t1	AT1G18210	56.081	148	60	3	15	161	11	154	1.46e-52	165
MS.gene05284.t1	AT1G73630	55.263	152	60	4	11	162	9	152	4.38e-51	161
MS.gene05284.t1	AT1G66400	51.049	143	66	2	21	160	10	151	1.05e-42	140
MS.gene05284.t1	AT5G37770	49.669	151	60	3	21	161	12	156	2.08e-40	134
MS.gene05284.t1	AT5G37770	49.669	151	60	3	21	161	12	156	2.08e-40	134
MS.gene05284.t1	AT1G24620	46.053	152	72	3	23	169	34	180	2.02e-37	127
MS.gene05284.t1	AT5G37780	41.727	139	79	2	26	163	12	149	2.87e-29	105
MS.gene05284.t1	AT5G37780	41.096	73	43	0	93	165	6	78	2.75e-11	58.9
MS.gene05284.t1	AT1G66410	41.727	139	79	2	26	163	12	149	2.87e-29	105
MS.gene05284.t1	AT1G66410	41.096	73	43	0	93	165	6	78	2.75e-11	58.9
MS.gene05284.t1	AT5G21274	42.446	139	78	2	26	163	12	149	3.49e-29	105
MS.gene05284.t1	AT5G21274	41.096	73	43	0	93	165	6	78	2.89e-11	58.9
MS.gene05284.t1	AT3G56800	42.446	139	78	2	26	163	12	149	3.53e-29	105
MS.gene05284.t1	AT3G56800	41.096	73	43	0	93	165	6	78	3.05e-11	58.9
MS.gene05284.t1	AT2G27030	42.446	139	78	2	26	163	12	149	3.53e-29	105
MS.gene05284.t1	AT2G27030	41.096	73	43	0	93	165	6	78	3.05e-11	58.9
MS.gene05284.t1	AT2G41110	42.446	139	78	2	26	163	12	149	3.53e-29	105
MS.gene05284.t1	AT2G41110	41.096	73	43	0	93	165	6	78	3.05e-11	58.9
MS.gene05284.t1	AT2G27030	40.816	147	85	2	24	169	10	155	6.13e-29	105
MS.gene05284.t1	AT2G27030	41.096	73	43	0	93	165	6	78	6.15e-11	58.5
MS.gene05284.t1	AT3G43810	41.727	139	79	2	26	163	12	149	8.38e-29	104
MS.gene05284.t1	AT3G43810	41.096	73	43	0	93	165	6	78	2.78e-11	58.9
MS.gene05284.t1	AT2G15680	38.854	157	83	5	11	162	36	184	5.46e-28	103
MS.gene05284.t1	AT5G17470	39.161	143	81	3	27	165	3	143	1.28e-27	101
MS.gene05284.t1	AT3G43810	41.259	143	81	3	24	164	10	151	3.61e-27	102
MS.gene05284.t1	AT3G43810	41.096	73	43	0	93	165	6	78	5.01e-11	59.3
MS.gene05284.t1	AT4G14640	41.176	136	78	2	26	160	13	147	4.66e-27	100
MS.gene05284.t1	AT3G59440	37.580	157	90	3	8	162	38	188	9.96e-27	100
MS.gene05284.t1	AT2G36180	38.514	148	80	4	27	167	1	144	2.24e-26	98.2
MS.gene05284.t1	AT3G22930	41.606	137	77	3	26	160	35	170	2.28e-26	99.0
MS.gene05284.t1	AT1G05990	37.589	141	83	3	26	162	5	144	3.48e-26	97.8
MS.gene05284.t1	AT2G41110	39.073	151	78	3	26	163	12	161	6.29e-26	97.4
MS.gene05284.t1	AT4G03290	36.806	144	84	3	23	160	2	144	2.93e-25	95.5
MS.gene05284.t1	AT5G37780	37.662	154	79	3	26	163	12	164	4.81e-25	95.1
MS.gene05284.t1	AT3G07490	37.063	143	86	3	23	162	2	143	5.00e-25	94.7
MS.gene05284.t1	AT3G03400	39.695	131	73	4	27	153	6	134	1.72e-24	93.2
MS.gene05284.t1	AT5G37780	40.800	125	72	2	40	163	13	136	9.19e-24	91.3
MS.gene05284.t1	AT4G12860	36.364	143	87	3	23	162	2	143	1.52e-23	90.9
MS.gene05284.t1	AT1G66410	40.800	125	72	2	40	163	36	159	1.60e-23	91.3
MS.gene05284.t1	AT2G41090	38.194	144	86	2	24	167	10	150	2.07e-23	91.7
MS.gene05284.t1	AT5G37780	40.800	125	72	2	40	163	52	175	3.03e-23	90.9
MS.gene05284.t1	AT2G43290	36.552	145	83	4	26	162	65	208	1.17e-22	90.5
MS.gene05284.t1	AT4G14640	40.164	122	71	2	40	160	9	129	1.81e-22	87.8
MS.gene05284.t1	AT2G41410	34.320	169	99	5	9	167	48	214	3.63e-22	89.4
MS.gene05284.t1	AT3G10190	35.616	146	91	2	16	160	62	205	5.60e-21	85.9
MS.gene05284.t1	AT1G32250	33.571	140	85	2	24	156	14	152	6.08e-21	84.7
MS.gene05284.t1	AT1G66410	39.474	114	67	2	51	163	1	113	7.30e-21	83.2
MS.gene05284.t1	AT1G66410	39.474	114	67	2	51	163	1	113	7.30e-21	83.2
MS.gene05284.t1	AT3G43810	39.474	114	67	2	51	163	1	113	2.33e-20	81.6
MS.gene05284.t1	AT3G43810	39.474	114	67	2	51	163	1	113	2.33e-20	81.6
MS.gene05284.t1	AT5G42380	35.211	142	85	3	23	160	46	184	5.08e-20	82.8
MS.gene05284.t1	AT3G50770	35.664	143	85	4	25	161	63	204	5.87e-20	83.2
MS.gene05284.t1	AT3G03000	33.548	155	93	5	13	162	8	157	8.72e-20	81.6
MS.gene05284.t1	AT2G41100	32.704	159	84	3	26	164	66	221	1.06e-18	81.3
MS.gene05284.t1	AT2G41100	32.704	159	84	3	26	164	66	221	1.06e-18	81.3
MS.gene05284.t1	AT2G41100	32.704	159	84	3	26	164	66	221	1.06e-18	81.3
MS.gene05284.t1	AT2G41100	32.704	159	84	3	26	164	101	256	1.78e-18	81.3
MS.gene05284.t1	AT2G41100	32.919	161	85	4	26	167	12	168	7.77e-18	79.3
MS.gene05284.t1	AT2G41100	32.704	159	84	3	26	164	101	256	1.78e-18	81.3
MS.gene05284.t1	AT2G41100	32.919	161	85	4	26	167	12	168	7.77e-18	79.3
MS.gene05284.t1	AT1G18530	30.216	139	93	2	26	161	7	144	2.94e-18	77.4
MS.gene05284.t1	AT4G04740	35.714	140	84	3	23	160	370	505	5.63e-17	77.8
MS.gene05284.t1	AT4G04740	35.714	140	84	3	23	160	370	505	5.63e-17	77.8
MS.gene05284.t1	AT4G04740	35.714	140	84	3	23	160	370	505	5.63e-17	77.8
MS.gene05284.t1	AT4G04740	35.714	140	84	3	23	160	370	505	5.63e-17	77.8
MS.gene05284.t1	AT4G04740	35.714	140	84	3	23	160	370	505	5.63e-17	77.8
MS.gene05284.t1	AT4G04740	35.714	140	84	3	23	160	370	505	5.63e-17	77.8
MS.gene05284.t1	AT5G44460	36.250	160	87	5	18	164	21	178	7.35e-17	74.3
MS.gene05284.t1	AT3G51920	30.714	140	95	2	24	162	10	148	8.82e-17	73.6
MS.gene05284.t1	AT3G57530	36.296	135	82	3	27	160	369	500	1.97e-16	76.3
MS.gene05284.t1	AT1G76650	33.824	136	87	2	26	160	43	176	4.10e-16	72.4
MS.gene05284.t1	AT1G76650	33.824	136	87	2	26	160	43	176	4.10e-16	72.4
MS.gene05284.t1	AT4G04695	34.559	136	87	2	27	162	337	470	4.91e-16	75.1
MS.gene05284.t1	AT4G37010	32.143	140	85	3	26	160	27	161	6.43e-16	71.6
MS.gene05284.t1	AT4G37010	32.143	140	85	3	26	160	31	165	7.43e-16	71.6
MS.gene05284.t1	AT1G62820	33.333	141	84	4	27	163	14	148	9.64e-16	70.9
MS.gene05284.t1	AT1G12310	33.333	141	84	4	27	163	14	148	1.13e-15	70.5
MS.gene05284.t1	AT4G23650	34.328	134	86	2	27	160	384	515	2.32e-15	73.2
MS.gene05284.t1	AT3G51850	31.159	138	94	1	23	160	356	492	3.75e-15	72.8
MS.gene05284.t1	AT1G61950	31.034	145	98	2	23	167	401	543	6.43e-15	72.0
MS.gene05284.t1	AT5G19360	34.328	134	86	2	27	160	374	505	8.14e-15	71.6
MS.gene05284.t1	AT4G04720	35.294	136	82	3	27	160	385	516	8.91e-15	71.6
MS.gene05284.t1	AT4G04720	35.294	136	82	3	27	160	385	516	8.91e-15	71.6
MS.gene05284.t1	AT4G20780	32.143	168	91	5	18	164	22	187	9.61e-15	68.9
MS.gene05284.t1	AT4G04700	34.559	136	83	3	27	160	337	468	9.90e-15	71.2
MS.gene05284.t1	AT3G03410	30.657	137	86	2	28	164	4	131	1.16e-14	67.4
MS.gene05284.t1	AT2G41860	34.328	134	87	1	27	160	360	492	1.47e-14	70.9
MS.gene05284.t1	AT2G41860	34.328	134	87	1	27	160	360	492	1.50e-14	70.9
MS.gene05284.t1	AT3G50360	32.857	140	84	3	26	160	27	161	1.63e-14	67.8
MS.gene05284.t1	AT3G50360	39.189	74	45	0	100	173	28	101	4.26e-13	64.3
MS.gene05284.t1	AT4G21940	32.857	140	88	3	27	164	407	542	1.76e-14	70.9
MS.gene05284.t1	AT4G21940	32.857	140	88	3	27	164	407	542	1.82e-14	70.5
MS.gene05284.t1	AT1G76650	33.088	136	78	2	26	160	43	166	2.15e-14	67.8
MS.gene05284.t1	AT1G76640	31.159	138	91	2	26	160	22	158	4.43e-14	66.6
MS.gene05284.t1	AT1G21550	31.944	144	90	2	25	160	9	152	4.63e-14	66.6
MS.gene05284.t1	AT1G76040	32.836	134	88	2	27	160	179	310	4.94e-14	68.9
MS.gene05284.t1	AT1G76040	32.836	134	88	2	27	160	179	310	4.94e-14	68.9
MS.gene05284.t1	AT4G14640	37.113	97	59	2	26	121	13	108	5.32e-14	65.5
MS.gene05284.t1	AT1G76040	32.836	134	88	2	27	160	417	548	9.04e-14	68.6
MS.gene05284.t1	AT3G22930	37.500	96	58	2	26	120	35	129	1.12e-13	64.7
MS.gene05284.t1	AT5G12480	32.847	137	90	2	27	162	271	406	1.14e-13	68.2
MS.gene05284.t1	AT4G38230	32.432	148	97	2	27	174	186	330	1.18e-13	67.8
MS.gene05284.t1	AT5G12180	32.836	134	88	2	27	160	379	510	1.28e-13	68.2
MS.gene05284.t1	AT5G12480	32.847	137	90	2	27	162	365	500	1.35e-13	68.2
MS.gene05284.t1	AT3G25600	26.950	141	99	2	24	161	10	149	1.42e-13	65.5
MS.gene05284.t1	AT4G38230	32.432	148	97	2	27	174	330	474	1.89e-13	67.8
MS.gene05284.t1	AT4G38230	32.432	148	97	2	27	174	330	474	1.89e-13	67.8
MS.gene05284.t1	AT4G38230	32.432	148	97	2	27	174	360	504	2.13e-13	67.4
MS.gene05284.t1	AT3G10660	31.343	134	89	2	27	160	492	622	2.68e-13	67.4
MS.gene05284.t1	AT3G10660	31.343	134	89	2	27	160	492	622	2.68e-13	67.4
MS.gene05284.t1	AT3G20410	33.333	138	90	2	23	160	393	528	4.79e-13	66.6
MS.gene05284.t1	AT3G20410	33.333	138	90	2	23	160	393	528	4.79e-13	66.6
MS.gene05284.t1	AT1G74740	32.168	143	94	3	21	162	359	499	1.06e-12	65.5
MS.gene05284.t1	AT5G04870	32.593	135	86	3	27	160	456	586	1.50e-12	65.1
MS.gene05284.t1	AT2G17290	32.450	151	96	3	27	174	391	538	2.16e-12	64.7
MS.gene05284.t1	AT2G17290	32.450	151	96	3	27	174	391	538	2.16e-12	64.7
MS.gene05284.t1	AT1G50700	31.429	140	94	2	23	162	375	512	2.54e-12	64.3
MS.gene05284.t1	AT3G03430	44.444	63	33	1	29	91	12	72	2.58e-12	60.1
MS.gene05284.t1	AT5G23580	32.090	134	88	2	27	160	328	458	2.74e-12	64.3
MS.gene05284.t1	AT5G19450	31.618	136	93	0	27	162	363	498	5.98e-12	63.5
MS.gene05284.t1	AT5G19450	31.618	136	93	0	27	162	363	498	5.98e-12	63.5
MS.gene05284.t1	AT2G41100	31.148	122	62	2	63	164	12	131	7.14e-12	61.6
MS.gene05284.t1	AT1G18890	30.769	143	96	3	21	162	363	503	8.32e-12	62.8
MS.gene05284.t1	AT1G35670	32.090	134	88	3	27	160	332	462	1.47e-11	62.4
MS.gene05284.t1	AT4G09570	32.090	134	88	3	27	160	331	461	1.47e-11	62.4
MS.gene05284.t1	AT3G01830	30.935	139	90	3	25	160	10	145	3.51e-11	58.5
MS.gene05284.t1	AT5G17480	46.667	60	30	1	29	88	12	69	4.54e-11	56.6

Find 41 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCGGCAGAACGCGGCGAATT+CGG	0.292639	6.3:+73871457	None:intergenic
CGGCAGAACGCGGCGAATTC+GGG	0.362081	6.3:+73871458	None:intergenic
TTGATGAAACCGTCGTGGTC+GGG	0.402953	6.3:+73871485	None:intergenic
ATGGATTCGTTTGTTGCCAT+TGG	0.410479	6.3:+73871704	None:intergenic
CTAATTAACAGATTCGTTAA+CGG	0.439981	6.3:+73871199	None:intergenic
AGTGGTGAAGGTGTTGGAGC+CGG	0.455587	6.3:+73871665	None:intergenic
AACGGTTTCGAGTTCGTTGA+CGG	0.458198	6.3:+73871574	None:intergenic
GGATCTGAGTGTTCGGAGAA+CGG	0.493457	6.3:+73871556	None:intergenic
CCGAGGAGTGGTGAAGGTGT+TGG	0.510460	6.3:+73871659	None:intergenic
TTCAACAACTTCGACGCAAA+CGG	0.511287	6.3:-73871611	MS.gene05284:CDS
GTGGTGAAGGTGTTGGAGCC+GGG	0.512054	6.3:+73871666	None:intergenic
TGATGAAACCGTCGTGGTCG+GGG	0.513593	6.3:+73871486	None:intergenic
CATCTTGCACTGGATCGTCT+TGG	0.513604	6.3:-73871341	MS.gene05284:CDS
AACTTCGACGCAAACGGCGA+CGG	0.533145	6.3:-73871605	MS.gene05284:CDS
GTTGATGAAACCGTCGTGGT+CGG	0.536310	6.3:+73871484	None:intergenic
TTCTTCGTGTTGTGGTACGT+CGG	0.540260	6.3:+73871535	None:intergenic
TTCACCACTCCTCGGCGACA+TGG	0.543332	6.3:-73871651	MS.gene05284:CDS
GTACGTCGGATCTGAGTGTT+CGG	0.545867	6.3:+73871549	None:intergenic
TGAAGAGCTTCATCTTGCAC+TGG	0.547507	6.3:-73871351	MS.gene05284:CDS
GGAGCCGGGTCGGATTCTAC+TGG	0.548888	6.3:+73871680	None:intergenic
ATCGCCGCCGTCGGTAGTGT+CGG	0.552642	6.3:+73871433	None:intergenic
CGTCGGAGTTCTTCGTGTTG+TGG	0.552939	6.3:+73871527	None:intergenic
TCGTCCATGTCGCCGAGGAG+TGG	0.561055	6.3:+73871647	None:intergenic
ATGTCGCCGAGGAGTGGTGA+AGG	0.569574	6.3:+73871653	None:intergenic
TGAAGGTGTTGGAGCCGGGT+CGG	0.584534	6.3:+73871670	None:intergenic
TGAGTTCTTGCATGACGCGT+CGG	0.585587	6.3:+73871510	None:intergenic
CGGGTCGGATTCTACTGGAA+TGG	0.586331	6.3:+73871685	None:intergenic
ATTAAATCTGTTGATTCTGA+CGG	0.599831	6.3:-73871284	MS.gene05284:CDS
AAGAGCTGAATCGCCGCCGT+CGG	0.603533	6.3:+73871424	None:intergenic
TGGAATGAAGTGTTCCGTTG+AGG	0.607616	6.3:-73871321	MS.gene05284:CDS
TCTGTTGATTCTGACGGTGA+CGG	0.619111	6.3:-73871278	MS.gene05284:CDS
CCAACACCTTCACCACTCCT+CGG	0.619994	6.3:-73871659	MS.gene05284:CDS
CATTCCAGTAGAATCCGACC+CGG	0.648159	6.3:-73871684	MS.gene05284:CDS
AGTGTCGGAGCGGCAGAACG+CGG	0.649477	6.3:+73871448	None:intergenic
CGCCGTCGGTAGTGTCGGAG+CGG	0.653897	6.3:+73871438	None:intergenic
CATCTCATGACATTCCTCAA+CGG	0.668312	6.3:+73871307	None:intergenic
CGCTCCGACACTACCGACGG+CGG	0.677401	6.3:-73871437	MS.gene05284:CDS
TGCCGCTCCGACACTACCGA+CGG	0.677523	6.3:-73871440	MS.gene05284:CDS
TGAGTTCGTCCATGTCGCCG+AGG	0.697339	6.3:+73871642	None:intergenic
GTAAGTTGATGAAACCGTCG+TGG	0.715924	6.3:+73871480	None:intergenic
GAACTCAGCCCCGACCACGA+CGG	0.723930	6.3:-73871494	MS.gene05284:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CTATACGATAAAGATAAAAA+CGG	-	chr6.3:73871514-73871533	MS.gene05284:CDS	20.0%
!	CTAATTAACAGATTCGTTAA+CGG	+	chr6.3:73871704-73871723	None:intergenic	25.0%
!!!	ATTAAATCTGTTGATTCTGA+CGG	-	chr6.3:73871616-73871635	MS.gene05284:CDS	25.0%
	CATCTCATGACATTCCTCAA+CGG	+	chr6.3:73871596-73871615	None:intergenic	40.0%
	TTCAACAACTTCGACGCAAA+CGG	-	chr6.3:73871289-73871308	MS.gene05284:CDS	40.0%
	TGAAGAGCTTCATCTTGCAC+TGG	-	chr6.3:73871549-73871568	MS.gene05284:CDS	45.0%
	TTCTTCGTGTTGTGGTACGT+CGG	+	chr6.3:73871368-73871387	None:intergenic	45.0%
!	TGGAATGAAGTGTTCCGTTG+AGG	-	chr6.3:73871579-73871598	MS.gene05284:CDS	45.0%
!!	AACGGTTTCGAGTTCGTTGA+CGG	+	chr6.3:73871329-73871348	None:intergenic	45.0%
!!	GTAAGTTGATGAAACCGTCG+TGG	+	chr6.3:73871423-73871442	None:intergenic	45.0%
!!	TCTGTTGATTCTGACGGTGA+CGG	-	chr6.3:73871622-73871641	MS.gene05284:CDS	45.0%
	CATCTTGCACTGGATCGTCT+TGG	-	chr6.3:73871559-73871578	MS.gene05284:CDS	50.0%
	CATTCCAGTAGAATCCGACC+CGG	-	chr6.3:73871216-73871235	MS.gene05284:CDS	50.0%
	GGATCTGAGTGTTCGGAGAA+CGG	+	chr6.3:73871347-73871366	None:intergenic	50.0%
	GTACGTCGGATCTGAGTGTT+CGG	+	chr6.3:73871354-73871373	None:intergenic	50.0%
	TGAGTTCTTGCATGACGCGT+CGG	+	chr6.3:73871393-73871412	None:intergenic	50.0%
	TTGATGAAACCGTCGTGGTC+GGG	+	chr6.3:73871418-73871437	None:intergenic	50.0%
!	GTTGATGAAACCGTCGTGGT+CGG	+	chr6.3:73871419-73871438	None:intergenic	50.0%
	AACTTCGACGCAAACGGCGA+CGG	-	chr6.3:73871295-73871314	MS.gene05284:CDS	55.0%
	CCAACACCTTCACCACTCCT+CGG	-	chr6.3:73871241-73871260	MS.gene05284:CDS	55.0%
	CGGGTCGGATTCTACTGGAA+TGG	+	chr6.3:73871218-73871237	None:intergenic	55.0%
	CGTCGGAGTTCTTCGTGTTG+TGG	+	chr6.3:73871376-73871395	None:intergenic	55.0%
	TGATGAAACCGTCGTGGTCG+GGG	+	chr6.3:73871417-73871436	None:intergenic	55.0%
!!	AGTGGTGAAGGTGTTGGAGC+CGG	+	chr6.3:73871238-73871257	None:intergenic	55.0%
	AAGAGCTGAATCGCCGCCGT+CGG	+	chr6.3:73871479-73871498	None:intergenic	60.0%
	ATGTCGCCGAGGAGTGGTGA+AGG	+	chr6.3:73871250-73871269	None:intergenic	60.0%
	TGAGTTCGTCCATGTCGCCG+AGG	+	chr6.3:73871261-73871280	None:intergenic	60.0%
	TTCACCACTCCTCGGCGACA+TGG	-	chr6.3:73871249-73871268	MS.gene05284:CDS	60.0%
!	CCGAGGAGTGGTGAAGGTGT+TGG	+	chr6.3:73871244-73871263	None:intergenic	60.0%
!!	GTGGTGAAGGTGTTGGAGCC+GGG	+	chr6.3:73871237-73871256	None:intergenic	60.0%
!!	TGAAGGTGTTGGAGCCGGGT+CGG	+	chr6.3:73871233-73871252	None:intergenic	60.0%
	ATCGCCGCCGTCGGTAGTGT+CGG	+	chr6.3:73871470-73871489	None:intergenic	65.0%
	CGGCAGAACGCGGCGAATTC+GGG	+	chr6.3:73871445-73871464	None:intergenic	65.0%
	GAACTCAGCCCCGACCACGA+CGG	-	chr6.3:73871406-73871425	MS.gene05284:CDS	65.0%
	GCGGCAGAACGCGGCGAATT+CGG	+	chr6.3:73871446-73871465	None:intergenic	65.0%
	GGAGCCGGGTCGGATTCTAC+TGG	+	chr6.3:73871223-73871242	None:intergenic	65.0%
	TCGTCCATGTCGCCGAGGAG+TGG	+	chr6.3:73871256-73871275	None:intergenic	65.0%
	TGCCGCTCCGACACTACCGA+CGG	-	chr6.3:73871460-73871479	MS.gene05284:CDS	65.0%
!	AGTGTCGGAGCGGCAGAACG+CGG	+	chr6.3:73871455-73871474	None:intergenic	65.0%
	CGCTCCGACACTACCGACGG+CGG	-	chr6.3:73871463-73871482	MS.gene05284:CDS	70.0%
!	CGCCGTCGGTAGTGTCGGAG+CGG	+	chr6.3:73871465-73871484	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	73871199	73871723	73871199	ID=MS.gene05284
chr6.3	mRNA	73871199	73871723	73871199	ID=MS.gene05284.t1;Parent=MS.gene05284
chr6.3	exon	73871199	73871723	73871199	ID=MS.gene05284.t1.exon1;Parent=MS.gene05284.t1
chr6.3	CDS	73871199	73871723	73871199	ID=cds.MS.gene05284.t1;Parent=MS.gene05284.t1

Gene Sequence

>MS.gene05284

ATGGCAACAAACGAATCCATTCCAGTAGAATCCGACCCGGCTCCAACACCTTCACCACTCCTCGGCGACATGGACGAACTCAAAAAAGTCTTCAACAACTTCGACGCAAACGGCGACGGCAAGATCTCCGTCAACGAACTCGAAACCGTTCTCCGAACACTCAGATCCGACGTACCACAACACGAAGAACTCCGACGCGTCATGCAAGAACTCAGCCCCGACCACGACGGTTTCATCAACTTACCCGAATTCGCCGCGTTCTGCCGCTCCGACACTACCGACGGCGGCGATTCAGCTCTTCGTGACGCGTTCGATCTATACGATAAAGATAAAAACGGACTCATTTCAACTGAAGAGCTTCATCTTGCACTGGATCGTCTTGGAATGAAGTGTTCCGTTGAGGAATGTCATGAGATGATTAAATCTGTTGATTCTGACGGTGACGGTAGCGTTAACTTTGAAGAATTCAAGATGATGATGACAGCGAAAGTCAAGACTCACACCGTTAACGAATCTGTTAATTAG

Protein sequence

>MS.gene05284.t1

MATNESIPVESDPAPTPSPLLGDMDELKKVFNNFDANGDGKISVNELETVLRTLRSDVPQHEELRRVMQELSPDHDGFINLPEFAAFCRSDTTDGGDSALRDAFDLYDKDKNGLISTEELHLALDRLGMKCSVEECHEMIKSVDSDGDGSVNFEEFKMMMTAKVKTHTVNESVN