AlfalfaGEDB | MS.gene80012

M. sativa cultivar XinJiangDaYe / MS.gene80012

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF00036.35 PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80012.t1	XP_003630938.2	99.3	151	1	0	1	151	1	151	6.40E-75	290

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80012.t1	Q9FYK2	57.9	152	56	1	8	151	1	152	8.8e-41	167.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80012.t1	G7LAK6	99.3	151	1	0	1	151	1	151	4.6e-75	290.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene27516	MS.gene80012	PPI
MS.gene49270	MS.gene80012	PPI
MS.gene061261	MS.gene80012	PPI
MS.gene022456	MS.gene80012	PPI
MS.gene92789	MS.gene80012	PPI
MS.gene80012	MS.gene93763	PPI
MS.gene013748	MS.gene80012	PPI
MS.gene03228	MS.gene80012	PPI
MS.gene94551	MS.gene80012	PPI
MS.gene65954	MS.gene80012	PPI
MS.gene011400	MS.gene80012	PPI
MS.gene057167	MS.gene80012	PPI
MS.gene27529	MS.gene80012	PPI
MS.gene35563	MS.gene80012	PPI
MS.gene55496	MS.gene80012	PPI
MS.gene54637	MS.gene80012	PPI
MS.gene49271	MS.gene80012	PPI
MS.gene62540	MS.gene80012	PPI
MS.gene016268	MS.gene80012	PPI
MS.gene026940	MS.gene80012	PPI
MS.gene92775	MS.gene80012	PPI
MS.gene47134	MS.gene80012	PPI
MS.gene022455	MS.gene80012	PPI
MS.gene87673	MS.gene80012	PPI
MS.gene29793	MS.gene80012	PPI
MS.gene05284	MS.gene80012	PPI
MS.gene041795	MS.gene80012	PPI
MS.gene046988	MS.gene80012	PPI
MS.gene63000	MS.gene80012	PPI
MS.gene033361	MS.gene80012	PPI
MS.gene74452	MS.gene80012	PPI
MS.gene060446	MS.gene80012	PPI
MS.gene46237	MS.gene80012	PPI
MS.gene98294	MS.gene80012	PPI
MS.gene98295	MS.gene80012	PPI
MS.gene02545	MS.gene80012	PPI
MS.gene074100	MS.gene80012	PPI
MS.gene026618	MS.gene80012	PPI
MS.gene29794	MS.gene80012	PPI
MS.gene79028	MS.gene80012	PPI
MS.gene036930	MS.gene80012	PPI
MS.gene35562	MS.gene80012	PPI
MS.gene040127	MS.gene80012	PPI
MS.gene040331	MS.gene80012	PPI
MS.gene58906	MS.gene80012	PPI
MS.gene71511	MS.gene80012	PPI
MS.gene036915	MS.gene80012	PPI
MS.gene58860	MS.gene80012	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80012.t1	MTR_8g105230	99.338	151	1	0	1	151	1	151	1.61e-104	297
MS.gene80012.t1	MTR_1g032070	63.804	163	43	3	3	151	1	161	2.14e-66	201
MS.gene80012.t1	MTR_3g067610	51.282	117	53	1	36	152	5	117	8.79e-36	121
MS.gene80012.t1	MTR_3g083470	50.420	119	49	1	33	151	90	198	1.81e-31	112
MS.gene80012.t1	MTR_5g079340	47.826	115	59	1	36	150	4	117	3.93e-30	107
MS.gene80012.t1	MTR_7g087610	47.826	115	60	0	36	150	12	126	4.14e-28	102
MS.gene80012.t1	MTR_7g087610	45.902	61	33	0	36	96	85	145	3.55e-12	60.8
MS.gene80012.t1	MTR_5g088320	47.826	115	60	0	36	150	12	126	2.01e-27	100
MS.gene80012.t1	MTR_5g088320	45.902	61	33	0	36	96	85	145	2.19e-12	61.2
MS.gene80012.t1	MTR_6g025320	47.826	115	60	0	36	150	12	126	2.19e-27	100
MS.gene80012.t1	MTR_6g025320	45.902	61	33	0	36	96	85	145	2.21e-12	61.2
MS.gene80012.t1	MTR_1g046950	41.880	117	66	1	36	150	4	120	1.26e-26	97.8
MS.gene80012.t1	MTR_1g076650	44.348	115	64	0	36	150	12	126	1.66e-25	95.5
MS.gene80012.t1	MTR_1g076650	47.541	61	32	0	36	96	85	145	2.96e-12	60.8
MS.gene80012.t1	MTR_1g047100	39.496	119	65	2	36	150	4	119	1.83e-25	95.1
MS.gene80012.t1	MTR_1g041285	46.087	115	62	0	36	150	12	126	2.56e-25	94.7
MS.gene80012.t1	MTR_1g041285	44.262	61	34	0	36	96	85	145	7.16e-12	60.1
MS.gene80012.t1	MTR_4g086260	43.478	115	63	1	36	150	57	169	3.36e-25	95.9
MS.gene80012.t1	MTR_4g067270	43.590	117	64	1	36	150	5	121	6.28e-25	94.0
MS.gene80012.t1	MTR_8g107110	44.348	115	63	1	36	150	24	137	7.52e-25	94.0
MS.gene80012.t1	MTR_7g075040	38.312	154	86	4	6	150	17	170	1.22e-24	94.4
MS.gene80012.t1	MTR_5g027000	41.538	130	75	1	22	150	7	136	1.69e-24	93.2
MS.gene80012.t1	MTR_5g017550	38.411	151	77	5	11	150	16	161	2.03e-23	90.9
MS.gene80012.t1	MTR_5g017550	47.692	65	34	0	36	100	120	184	1.47e-12	62.8
MS.gene80012.t1	MTR_8g036075	35.583	163	85	5	7	150	10	171	3.26e-23	90.9
MS.gene80012.t1	MTR_5g017510	39.394	132	76	3	21	150	33	162	6.22e-22	87.0
MS.gene80012.t1	MTR_5g017510	44.615	65	36	0	36	100	121	185	3.13e-11	58.9
MS.gene80012.t1	MTR_5g017560	39.394	132	76	3	21	150	33	162	6.22e-22	87.0
MS.gene80012.t1	MTR_5g017560	44.615	65	36	0	36	100	121	185	3.13e-11	58.9
MS.gene80012.t1	MTR_6g079570	42.500	120	59	3	36	150	26	140	1.56e-21	85.9
MS.gene80012.t1	MTR_7g090450	37.313	134	71	4	36	156	73	206	9.49e-21	84.7
MS.gene80012.t1	MTR_7g089760	42.373	118	66	1	35	150	4	121	1.31e-19	80.1
MS.gene80012.t1	MTR_8g078270	38.971	136	78	3	19	150	33	167	3.10e-19	80.1
MS.gene80012.t1	MTR_6g023460	38.938	113	68	1	40	152	12	123	5.37e-19	78.6
MS.gene80012.t1	MTR_0168s0120	47.778	90	47	0	61	150	1	90	8.92e-19	77.0
MS.gene80012.t1	MTR_0168s0120	45.902	61	33	0	36	96	49	109	7.04e-13	61.6
MS.gene80012.t1	MTR_6g025320	47.778	90	47	0	61	150	1	90	8.92e-19	77.0
MS.gene80012.t1	MTR_6g025320	45.902	61	33	0	36	96	49	109	7.04e-13	61.6
MS.gene80012.t1	MTR_6g007613	33.333	135	86	1	20	150	9	143	1.20e-18	77.8
MS.gene80012.t1	MTR_7g074020	34.783	115	75	0	36	150	30	144	1.26e-18	77.8
MS.gene80012.t1	MTR_4g103650	40.000	115	68	1	36	150	2	115	1.45e-18	77.0
MS.gene80012.t1	MTR_4g103630	39.130	115	69	1	36	150	6	119	1.77e-18	77.0
MS.gene80012.t1	MTR_2g098890	36.111	144	84	3	12	151	44	183	1.81e-18	78.6
MS.gene80012.t1	MTR_3g089090	36.207	116	73	1	37	152	6	120	1.97e-18	77.0
MS.gene80012.t1	MTR_3g089070	36.207	116	73	1	37	152	7	121	1.99e-18	77.0
MS.gene80012.t1	MTR_7g074020	34.783	115	75	0	36	150	30	144	2.01e-18	77.8
MS.gene80012.t1	MTR_6g007613	33.333	135	86	1	20	150	9	143	2.16e-18	77.4
MS.gene80012.t1	MTR_4g103655	39.130	115	69	1	36	150	6	119	2.81e-18	76.6
MS.gene80012.t1	MTR_8g066630	38.136	118	70	1	36	150	17	134	9.99e-18	75.5
MS.gene80012.t1	MTR_8g066630	43.939	66	37	0	36	101	93	158	1.31e-12	62.4
MS.gene80012.t1	MTR_5g008705	33.645	107	71	0	44	150	2	108	5.67e-17	72.8
MS.gene80012.t1	MTR_1g071150	36.975	119	68	2	35	150	11	125	3.80e-16	71.2
MS.gene80012.t1	MTR_1g071150	43.056	72	41	0	25	96	73	144	6.69e-15	67.8
MS.gene80012.t1	MTR_4g112460	31.624	117	78	1	36	150	11	127	1.42e-15	70.1
MS.gene80012.t1	MTR_4g112460	57.407	54	23	0	40	93	90	143	3.75e-13	63.9
MS.gene80012.t1	MTR_5g008695	33.684	95	61	1	60	152	1	95	6.15e-15	67.0
MS.gene80012.t1	MTR_8g069915	31.356	118	79	1	36	151	12	129	1.96e-14	67.0
MS.gene80012.t1	MTR_8g069915	45.312	64	35	0	36	99	87	150	1.00e-12	62.8
MS.gene80012.t1	MTR_5g079470	52.542	59	27	1	38	96	12	69	4.52e-14	63.9
MS.gene80012.t1	MTR_4g115170	35.338	133	68	2	36	150	64	196	5.69e-14	67.0
MS.gene80012.t1	MTR_5g011850	31.579	114	76	1	37	150	13	124	2.07e-13	63.9
MS.gene80012.t1	MTR_7g115040	36.364	121	77	0	30	150	6	126	1.14e-12	62.0
MS.gene80012.t1	MTR_1g030440	33.858	127	68	3	34	150	20	140	1.21e-12	62.4
MS.gene80012.t1	MTR_7g074240	31.783	129	78	2	20	138	8	136	1.57e-12	62.4
MS.gene80012.t1	MTR_0028s0170	37.374	99	61	1	37	135	384	481	4.53e-12	63.2
MS.gene80012.t1	MTR_8g099095	34.821	112	70	2	37	146	372	482	5.45e-12	62.8
MS.gene80012.t1	MTR_4g132040	35.577	104	62	2	37	138	401	501	6.94e-12	62.4
MS.gene80012.t1	MTR_5g009830	34.821	112	70	2	37	146	372	482	8.99e-12	62.0
MS.gene80012.t1	MTR_4g132070	33.628	113	68	3	37	145	397	506	9.25e-12	62.0
MS.gene80012.t1	MTR_7g068710	36.364	110	64	3	36	142	361	467	1.21e-11	62.0
MS.gene80012.t1	MTR_1g096490	35.577	104	66	1	35	138	334	436	1.77e-11	61.2
MS.gene80012.t1	MTR_7g106710	35.577	104	62	2	37	138	441	541	5.86e-11	59.7
MS.gene80012.t1	MTR_3g088655	32.558	129	75	4	34	150	6	134	7.26e-11	57.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80012.t1	AT1G24620	57.419	155	52	2	8	151	1	152	6.26e-55	171
MS.gene80012.t1	AT5G37770	42.969	128	69	1	27	150	8	135	3.60e-28	102
MS.gene80012.t1	AT5G37770	44.615	65	36	0	36	100	94	158	3.53e-13	63.9
MS.gene80012.t1	AT5G37770	42.969	128	69	1	27	150	8	135	3.60e-28	102
MS.gene80012.t1	AT5G37770	44.615	65	36	0	36	100	94	158	3.53e-13	63.9
MS.gene80012.t1	AT5G37780	48.696	115	59	0	36	150	12	126	5.44e-28	101
MS.gene80012.t1	AT5G37780	45.902	61	33	0	36	96	85	145	3.64e-12	60.8
MS.gene80012.t1	AT1G66410	48.696	115	59	0	36	150	12	126	5.44e-28	101
MS.gene80012.t1	AT1G66410	45.902	61	33	0	36	96	85	145	3.64e-12	60.8
MS.gene80012.t1	AT1G66400	41.880	117	66	1	36	150	15	131	6.67e-28	101
MS.gene80012.t1	AT1G66400	46.552	58	31	0	36	93	90	147	3.36e-12	61.2
MS.gene80012.t1	AT1G18210	46.552	116	58	1	36	151	23	134	9.20e-28	101
MS.gene80012.t1	AT1G18210	46.552	116	58	1	36	151	23	134	9.20e-28	101
MS.gene80012.t1	AT5G21274	48.696	115	59	0	36	150	12	126	9.44e-28	101
MS.gene80012.t1	AT5G21274	47.541	61	32	0	36	96	85	145	1.09e-12	62.0
MS.gene80012.t1	AT2G27030	47.826	115	60	0	36	150	12	126	1.92e-27	101
MS.gene80012.t1	AT2G27030	44.262	61	34	0	36	96	85	145	6.48e-12	60.8
MS.gene80012.t1	AT3G43810	47.826	115	60	0	36	150	12	126	2.29e-27	100
MS.gene80012.t1	AT3G43810	45.902	61	33	0	36	96	85	145	2.32e-12	61.2
MS.gene80012.t1	AT3G56800	47.826	115	60	0	36	150	12	126	2.40e-27	100
MS.gene80012.t1	AT3G56800	44.262	61	34	0	36	96	85	145	8.34e-12	59.7
MS.gene80012.t1	AT2G27030	47.826	115	60	0	36	150	12	126	2.40e-27	100
MS.gene80012.t1	AT2G27030	44.262	61	34	0	36	96	85	145	8.34e-12	59.7
MS.gene80012.t1	AT2G41110	47.826	115	60	0	36	150	12	126	2.40e-27	100
MS.gene80012.t1	AT2G41110	44.262	61	34	0	36	96	85	145	8.34e-12	59.7
MS.gene80012.t1	AT1G73630	43.590	117	62	1	36	152	20	132	2.43e-27	100
MS.gene80012.t1	AT3G43810	47.826	115	60	0	36	150	12	126	4.17e-27	101
MS.gene80012.t1	AT3G43810	45.902	61	33	0	36	96	85	145	3.94e-12	62.0
MS.gene80012.t1	AT3G22930	46.087	115	62	0	36	150	35	149	2.76e-25	95.5
MS.gene80012.t1	AT3G22930	45.902	61	33	0	36	96	108	168	1.33e-11	59.7
MS.gene80012.t1	AT4G14640	44.348	115	64	0	36	150	13	127	4.73e-25	94.4
MS.gene80012.t1	AT4G14640	45.902	61	33	0	36	96	86	146	4.20e-12	60.8
MS.gene80012.t1	AT2G43290	44.355	124	58	3	36	150	65	186	6.24e-25	95.9
MS.gene80012.t1	AT2G15680	38.462	117	66	2	36	150	50	162	1.90e-24	93.6
MS.gene80012.t1	AT2G15680	44.444	63	35	0	34	96	119	181	1.99e-13	65.1
MS.gene80012.t1	AT2G41110	43.307	127	60	1	36	150	12	138	1.96e-24	92.8
MS.gene80012.t1	AT2G41110	44.262	61	34	0	36	96	97	157	1.05e-11	59.7
MS.gene80012.t1	AT2G41100	42.105	133	58	2	36	150	66	197	4.35e-24	95.1
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	156	214	3.70e-13	65.5
MS.gene80012.t1	AT2G41100	42.105	133	58	2	36	150	66	197	4.35e-24	95.1
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	156	214	3.70e-13	65.5
MS.gene80012.t1	AT2G41100	42.105	133	58	2	36	150	66	197	4.35e-24	95.1
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	156	214	3.70e-13	65.5
MS.gene80012.t1	AT3G50360	33.333	144	92	1	7	150	2	141	5.66e-24	92.0
MS.gene80012.t1	AT5G37780	43.077	130	59	1	36	150	12	141	7.21e-24	91.7
MS.gene80012.t1	AT5G37780	45.902	61	33	0	36	96	100	160	4.81e-12	60.8
MS.gene80012.t1	AT2G41100	43.609	133	56	3	36	150	101	232	7.84e-24	95.1
MS.gene80012.t1	AT2G41100	36.641	131	67	2	36	150	12	142	1.93e-19	83.2
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	191	249	4.66e-13	65.5
MS.gene80012.t1	AT2G41100	43.609	133	56	3	36	150	101	232	7.84e-24	95.1
MS.gene80012.t1	AT2G41100	36.641	131	67	2	36	150	12	142	1.93e-19	83.2
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	191	249	4.66e-13	65.5
MS.gene80012.t1	AT3G59440	39.355	155	82	5	1	150	19	166	3.70e-23	90.5
MS.gene80012.t1	AT5G37780	48.515	101	52	0	50	150	13	113	8.74e-23	88.2
MS.gene80012.t1	AT5G37780	45.902	61	33	0	36	96	72	132	3.14e-12	60.8
MS.gene80012.t1	AT1G05990	45.763	118	61	2	36	150	5	122	8.78e-23	88.6
MS.gene80012.t1	AT1G66410	48.515	101	52	0	50	150	36	136	1.02e-22	88.6
MS.gene80012.t1	AT1G66410	45.902	61	33	0	36	96	95	155	4.09e-12	60.8
MS.gene80012.t1	AT5G37780	48.515	101	52	0	50	150	52	152	1.19e-22	89.0
MS.gene80012.t1	AT5G37780	45.902	61	33	0	36	96	111	171	5.35e-12	60.8
MS.gene80012.t1	AT4G03290	43.333	120	63	2	36	150	5	124	4.48e-22	86.7
MS.gene80012.t1	AT4G12860	44.068	118	64	1	35	150	4	121	4.94e-21	84.0
MS.gene80012.t1	AT3G22930	46.316	95	51	0	36	130	35	129	6.89e-21	83.2
MS.gene80012.t1	AT4G14640	43.564	101	57	0	50	150	9	109	7.99e-21	82.8
MS.gene80012.t1	AT4G14640	45.902	61	33	0	36	96	68	128	2.66e-12	60.8
MS.gene80012.t1	AT5G17470	36.752	117	70	2	37	150	3	118	8.47e-21	83.2
MS.gene80012.t1	AT5G17470	45.614	57	31	0	37	93	78	134	2.37e-11	58.5
MS.gene80012.t1	AT4G14640	44.211	95	53	0	36	130	13	107	2.07e-20	81.6
MS.gene80012.t1	AT2G41410	41.667	120	65	4	36	151	70	188	5.88e-20	82.8
MS.gene80012.t1	AT3G50770	36.842	152	80	4	7	150	40	183	6.58e-20	82.4
MS.gene80012.t1	AT3G10190	38.636	132	66	5	36	155	70	198	9.38e-20	82.0
MS.gene80012.t1	AT1G66410	48.889	90	46	0	61	150	1	90	2.35e-19	78.6
MS.gene80012.t1	AT1G66410	45.902	61	33	0	36	96	49	109	1.30e-12	61.2
MS.gene80012.t1	AT1G66410	48.889	90	46	0	61	150	1	90	2.35e-19	78.6
MS.gene80012.t1	AT1G66410	45.902	61	33	0	36	96	49	109	1.30e-12	61.2
MS.gene80012.t1	AT3G43810	47.778	90	47	0	61	150	1	90	9.34e-19	77.0
MS.gene80012.t1	AT3G43810	45.902	61	33	0	36	96	49	109	7.37e-13	61.6
MS.gene80012.t1	AT3G43810	47.778	90	47	0	61	150	1	90	9.34e-19	77.0
MS.gene80012.t1	AT3G43810	45.902	61	33	0	36	96	49	109	7.37e-13	61.6
MS.gene80012.t1	AT4G37010	31.579	133	87	1	18	150	17	145	1.45e-18	78.2
MS.gene80012.t1	AT4G37010	31.579	133	87	1	18	150	13	141	1.83e-18	77.8
MS.gene80012.t1	AT5G42380	40.171	117	67	2	36	150	49	164	3.28e-18	77.4
MS.gene80012.t1	AT1G32250	36.508	126	64	2	36	150	16	136	3.45e-17	74.3
MS.gene80012.t1	AT1G32250	38.372	86	45	2	18	102	84	162	1.82e-11	59.3
MS.gene80012.t1	AT3G07490	38.462	117	70	1	36	150	5	121	3.68e-17	73.9
MS.gene80012.t1	AT3G03430	54.839	62	27	1	35	96	8	68	5.70e-17	71.6
MS.gene80012.t1	AT3G03400	32.759	116	76	1	37	150	6	121	1.09e-16	72.4
MS.gene80012.t1	AT1G76650	38.261	115	70	1	36	150	43	156	1.09e-15	70.9
MS.gene80012.t1	AT1G76650	38.261	115	70	1	36	150	43	156	1.09e-15	70.9
MS.gene80012.t1	AT2G41100	40.741	108	45	2	61	150	1	107	1.29e-15	70.9
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	66	124	1.41e-13	65.5
MS.gene80012.t1	AT2G41090	40.816	98	55	1	36	133	12	106	3.89e-15	69.7
MS.gene80012.t1	AT2G36180	33.333	117	75	1	37	150	1	117	1.44e-14	67.0
MS.gene80012.t1	AT5G17480	50.000	62	30	1	35	96	8	68	2.97e-14	64.7
MS.gene80012.t1	AT3G03000	46.032	63	34	0	36	98	94	156	3.15e-14	66.6
MS.gene80012.t1	AT3G03000	38.017	121	66	2	35	150	19	135	9.00e-13	62.8
MS.gene80012.t1	AT3G25600	29.060	117	81	1	36	150	12	128	3.44e-14	66.2
MS.gene80012.t1	AT3G25600	43.750	64	36	0	36	99	87	150	2.79e-12	61.2
MS.gene80012.t1	AT1G62820	32.456	114	75	1	37	150	14	125	4.57e-14	65.9
MS.gene80012.t1	AT1G18530	48.438	64	33	0	36	99	82	145	7.02e-14	65.5
MS.gene80012.t1	AT1G18530	29.060	117	81	1	36	150	7	123	1.14e-13	65.1
MS.gene80012.t1	AT2G41100	50.847	59	29	0	36	94	12	70	1.29e-13	64.7
MS.gene80012.t1	AT1G12310	31.579	114	76	1	37	150	14	125	4.63e-13	63.2
MS.gene80012.t1	AT1G76640	35.772	123	73	3	36	155	22	141	9.61e-13	62.4
MS.gene80012.t1	AT4G23650	35.714	112	69	2	37	146	384	494	1.71e-12	64.3
MS.gene80012.t1	AT5G19360	36.275	102	64	1	37	138	374	474	8.49e-12	62.4
MS.gene80012.t1	AT3G51920	29.565	115	81	0	36	150	12	126	9.62e-12	59.7
MS.gene80012.t1	AT3G51920	46.154	65	35	0	29	93	78	142	5.19e-11	57.8
MS.gene80012.t1	AT5G12180	36.275	102	64	1	37	138	379	479	1.43e-11	61.6
MS.gene80012.t1	AT4G04720	33.333	114	69	3	37	146	385	495	1.95e-11	61.2
MS.gene80012.t1	AT4G04720	33.333	114	69	3	37	146	385	495	1.95e-11	61.2
MS.gene80012.t1	AT5G23580	36.538	104	65	1	35	138	326	428	2.50e-11	60.8

Find 0 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TTCAAAAAATTCGACGTCAA+CGG	-	14502:29695-29714	MS.gene80012:CDS	30.0%
!!	AACATTGATTTCAAACCCAT+GGG	+	14502:29581-29600	MS.gene80012:intergenic	30.0%
!!!	TGCTTTTGCTGTTTTTGATA+TGG	-	14502:29910-29929	MS.gene80012:CDS	30.0%
!!!	TTGCTGTTTTTGATATGGAT+GGG	-	14502:29915-29934	MS.gene80012:CDS	30.0%
!!!	TTTGCTGTTTTTGATATGGA+TGG	-	14502:29914-29933	MS.gene80012:CDS	30.0%
	CATGTTGTTGAGTTCTTGTT+CGG	+	14502:29783-29802	MS.gene80012:intergenic	35.0%
	TGAGATCTTGGAGAATTTGA+AGG	-	14502:29886-29905	MS.gene80012:CDS	35.0%
!	ACATTACTCCGATCATTTTC+CGG	+	14502:30015-30034	MS.gene80012:intergenic	35.0%
!	GTTTTTGATATGGATGGGAA+TGG	-	14502:29920-29939	MS.gene80012:CDS	35.0%
!!	GAACATTGATTTCAAACCCA+TGG	+	14502:29582-29601	MS.gene80012:intergenic	35.0%
	AAGATCTCTGCATCAGAACT+CGG	-	14502:29725-29744	MS.gene80012:CDS	40.0%
	AATACGGTTATGAGAAGCCT+GGG	-	14502:29965-29984	MS.gene80012:CDS	40.0%
	ATCAGAACTCGGATCCATTA+TGG	-	14502:29736-29755	MS.gene80012:CDS	40.0%
	TAATACGGTTATGAGAAGCC+TGG	-	14502:29964-29983	MS.gene80012:CDS	40.0%
	TCAGAACTCGGATCCATTAT+GGG	-	14502:29737-29756	MS.gene80012:CDS	40.0%
	TGATGCTGCACATTTCAACA+AGG	+	14502:30081-30100	MS.gene80012:intergenic	40.0%
	TTCATCGAACTCAACACCAA+AGG	-	14502:29851-29870	MS.gene80012:CDS	40.0%
	TTGACCTAAGCTTCCCATAA+TGG	+	14502:29753-29772	MS.gene80012:intergenic	40.0%
	TTGAGTTCTTGTTCGGATGT+TGG	+	14502:29776-29795	MS.gene80012:intergenic	40.0%
!!	CGTTGATTCTGATGAGATCT+TGG	-	14502:29874-29893	MS.gene80012:CDS	40.0%
	AACATGATCCGTGAAGTCGA+CGG	-	14502:29797-29816	MS.gene80012:CDS	45.0%
	ATTAAGCTCTTCCGCCGTAA+TGG	+	14502:29948-29967	MS.gene80012:intergenic	45.0%
	CTCATCAGAATCAACGCCTT+TGG	+	14502:29870-29889	MS.gene80012:intergenic	45.0%
	GATCGGAGTAATGTTTGCGA+CGG	-	14502:30021-30040	MS.gene80012:CDS	45.0%
	GGATCCATTATGGGAAGCTT+AGG	-	14502:29746-29765	MS.gene80012:CDS	45.0%
	GGATGGGAATGGTTCCATTA+CGG	-	14502:29931-29950	MS.gene80012:CDS	45.0%
	TACGGCGGAAGAGCTTAATA+CGG	-	14502:29949-29968	MS.gene80012:CDS	45.0%
!	GAAAACTTCTTCGAGTTCGC+CGG	+	14502:29678-29697	MS.gene80012:intergenic	45.0%
	AAATTCGACGTCAACGGCGA+TGG	-	14502:29701-29720	MS.gene80012:CDS	50.0%
	AGTAATGTTTGCGACGGCGA+TGG	-	14502:30027-30046	MS.gene80012:CDS	50.0%
	GGAGGATCTGAGGATGAAGA+TGG	+	14502:29611-29630	MS.gene80012:intergenic	50.0%
	TGGGAATGGTTCCATTACGG+CGG	-	14502:29934-29953	MS.gene80012:CDS	50.0%
	AGATCGGGAAGGAGGATCTG+AGG	+	14502:29621-29640	MS.gene80012:intergenic	55.0%
	ATCCGTGAAGTCGACGGAGA+CGG	-	14502:29803-29822	MS.gene80012:CDS	55.0%
	CCAACGAGCATTCTTCACCC+AGG	+	14502:29985-30004	MS.gene80012:intergenic	55.0%
	CCTGGGTGAAGAATGCTCGT+TGG	-	14502:29982-30001	MS.gene80012:CDS	55.0%
	GGGTGAAGAATGCTCGTTGG+CGG	-	14502:29985-30004	MS.gene80012:CDS	55.0%
!!	GCGGAGTGCCGGAAAATGAT+CGG	-	14502:30004-30023	MS.gene80012:CDS	55.0%
	AATGCTCGTTGGCGGAGTGC+CGG	-	14502:29993-30012	MS.gene80012:CDS	60.0%
	AGGGAGGTAGATCGGGAAGG+AGG	+	14502:29629-29648	MS.gene80012:intergenic	60.0%
	CACGGAGAGGGAGGTAGATC+GGG	+	14502:29636-29655	MS.gene80012:intergenic	60.0%
	GAAGTCGACGGAGACGGTGA+CGG	-	14502:29809-29828	MS.gene80012:CDS	60.0%
	GAGAGGGAGGTAGATCGGGA+AGG	+	14502:29632-29651	MS.gene80012:intergenic	60.0%
	GCACGGAGAGGGAGGTAGAT+CGG	+	14502:29637-29656	MS.gene80012:intergenic	60.0%
!!	CACCGTCTCCGTCGACTTCA+CGG	+	14502:29808-29827	MS.gene80012:intergenic	60.0%
	AGTGCGGGAACGCACGGAGA+GGG	+	14502:29648-29667	MS.gene80012:intergenic	65.0%
	GAGACGAGTGCGGGAACGCA+CGG	+	14502:29654-29673	MS.gene80012:intergenic	65.0%
	CGTTCCCGCACTCGTCTCGC+CGG	-	14502:29656-29675	MS.gene80012:intron	70.0%
	GAGTGCGGGAACGCACGGAG+AGG	+	14502:29649-29668	MS.gene80012:intergenic	70.0%
	GTTCGCCGGCGAGACGAGTG+CGG	+	14502:29664-29683	MS.gene80012:intergenic	70.0%
	TTCGCCGGCGAGACGAGTGC+GGG	+	14502:29663-29682	MS.gene80012:intergenic	70.0%
	GCGGGAACGCACGGAGAGGG+AGG	+	14502:29645-29664	MS.gene80012:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
14502	gene	29575	30113	29575	ID=MS.gene80012
14502	mRNA	29575	30113	29575	ID=MS.gene80012.t1;Parent=MS.gene80012
14502	exon	29661	30113	29661	ID=MS.gene80012.t1.exon1;Parent=MS.gene80012.t1
14502	CDS	29661	30113	29661	ID=cds.MS.gene80012.t1;Parent=MS.gene80012.t1
14502	exon	29575	29592	29575	ID=MS.gene80012.t1.exon2;Parent=MS.gene80012.t1
14502	CDS	29575	29592	29575	ID=cds.MS.gene80012.t1;Parent=MS.gene80012.t1

Gene Sequence

>MS.gene80012

ATGCCCATGGGTTTGAAATCAATGTTCAACAAGCCATCTTCATCCTCAGATCCTCCTTCCCGATCTACCTCCCTCTCCGTGCGTTCCCGCACTCGTCTCGCCGGCGAACTCGAAGAAGTTTTCAAAAAATTCGACGTCAACGGCGATGGCAAGATCTCTGCATCAGAACTCGGATCCATTATGGGAAGCTTAGGTCAACCAACATCCGAACAAGAACTCAACAACATGATCCGTGAAGTCGACGGAGACGGTGACGGTTGCATCAGTTTACAAGAATTCATCGAACTCAACACCAAAGGCGTTGATTCTGATGAGATCTTGGAGAATTTGAAGGATGCTTTTGCTGTTTTTGATATGGATGGGAATGGTTCCATTACGGCGGAAGAGCTTAATACGGTTATGAGAAGCCTGGGTGAAGAATGCTCGTTGGCGGAGTGCCGGAAAATGATCGGAGTAATGTTTGCGACGGCGATGGAGTTTTTTTTTTTGCGAAATTGCTTTCTCCTTGTTGAAATGTGCAGCATCAATGTTTCAGATAA

Protein sequence

>MS.gene80012.t1

MPMGLKSMFNKPSSSSDPPSRSTSLSVRSRTRLAGELEEVFKKFDVNGDGKISASELGSIMGSLGQPTSEQELNNMIREVDGDGDGCISLQEFIELNTKGVDSDEILENLKDAFAVFDMDGNGSITAEELNTVMRSLGEECSLAECRKMIGHQCFR