AlfalfaGEDB | MS.gene98972

M. sativa cultivar XinJiangDaYe / MS.gene98972

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98972.t1	XP_013466550.1	97.5	198	5	0	1	198	1	198	3.50E-86	327.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98972.t1	Q9FYK2	56.0	175	73	2	10	183	4	175	3.5e-42	172.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98972.t1	G8A011	97.5	198	5	0	1	198	1	198	2.5e-86	327.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene040331	MS.gene98972	PPI
MS.gene58906	MS.gene98972	PPI
MS.gene036915	MS.gene98972	PPI
MS.gene58860	MS.gene98972	PPI
MS.gene27516	MS.gene98972	PPI
MS.gene49270	MS.gene98972	PPI
MS.gene061261	MS.gene98972	PPI
MS.gene022456	MS.gene98972	PPI
MS.gene92789	MS.gene98972	PPI
MS.gene013748	MS.gene98972	PPI
MS.gene98972	MS.gene79028	PPI
MS.gene03228	MS.gene98972	PPI
MS.gene94551	MS.gene98972	PPI
MS.gene65954	MS.gene98972	PPI
MS.gene011400	MS.gene98972	PPI
MS.gene27529	MS.gene98972	PPI
MS.gene35563	MS.gene98972	PPI
MS.gene55496	MS.gene98972	PPI
MS.gene54637	MS.gene98972	PPI
MS.gene49271	MS.gene98972	PPI
MS.gene62540	MS.gene98972	PPI
MS.gene016268	MS.gene98972	PPI
MS.gene63000	MS.gene98972	PPI
MS.gene026940	MS.gene98972	PPI
MS.gene92775	MS.gene98972	PPI
MS.gene98972	MS.gene057167	PPI
MS.gene98972	MS.gene93763	PPI
MS.gene47134	MS.gene98972	PPI
MS.gene022455	MS.gene98972	PPI
MS.gene87673	MS.gene98972	PPI
MS.gene29793	MS.gene98972	PPI
MS.gene05284	MS.gene98972	PPI
MS.gene041795	MS.gene98972	PPI
MS.gene046988	MS.gene98972	PPI
MS.gene98972	MS.gene71511	PPI
MS.gene033361	MS.gene98972	PPI
MS.gene98972	MS.gene35562	PPI
MS.gene040127	MS.gene98972	PPI
MS.gene74452	MS.gene98972	PPI
MS.gene060446	MS.gene98972	PPI
MS.gene29794	MS.gene98972	PPI
MS.gene46237	MS.gene98972	PPI
MS.gene98294	MS.gene98972	PPI
MS.gene98295	MS.gene98972	PPI
MS.gene02545	MS.gene98972	PPI
MS.gene074100	MS.gene98972	PPI
MS.gene026618	MS.gene98972	PPI
MS.gene036930	MS.gene98972	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98972.t1	MTR_1g032070	98.990	198	2	0	1	198	1	198	3.74e-142	394
MS.gene98972.t1	MTR_8g105230	73.944	142	37	0	36	177	26	167	5.03e-72	216
MS.gene98972.t1	MTR_3g067610	53.676	136	59	1	45	180	4	135	1.07e-45	148
MS.gene98972.t1	MTR_5g079340	51.471	136	65	1	45	180	3	137	4.45e-42	139
MS.gene98972.t1	MTR_1g046950	47.101	138	71	1	45	180	3	140	2.47e-39	132
MS.gene98972.t1	MTR_1g076650	49.265	136	69	0	46	181	12	147	6.20e-38	128
MS.gene98972.t1	MTR_1g076650	41.935	62	36	0	45	106	84	145	6.73e-11	58.5
MS.gene98972.t1	MTR_6g025320	48.276	145	71	1	42	182	4	148	2.52e-37	127
MS.gene98972.t1	MTR_7g087610	47.586	145	72	1	42	182	4	148	2.78e-37	127
MS.gene98972.t1	MTR_5g088320	48.551	138	71	0	46	183	12	149	2.81e-37	127
MS.gene98972.t1	MTR_5g088320	50.000	62	31	0	45	106	84	145	6.52e-14	66.6
MS.gene98972.t1	MTR_5g088320	49.254	67	34	0	114	180	7	73	2.48e-12	62.4
MS.gene98972.t1	MTR_1g047100	45.255	137	74	1	45	180	3	139	5.40e-37	125
MS.gene98972.t1	MTR_8g107110	49.265	136	68	1	45	180	23	157	5.93e-37	126
MS.gene98972.t1	MTR_1g041285	49.265	136	69	0	46	181	12	147	3.50e-36	124
MS.gene98972.t1	MTR_1g041285	42.857	77	44	0	30	106	69	145	3.01e-14	67.4
MS.gene98972.t1	MTR_7g075040	40.000	185	98	5	5	180	10	190	2.49e-35	123
MS.gene98972.t1	MTR_3g083470	47.059	153	66	3	46	198	93	230	3.31e-35	124
MS.gene98972.t1	MTR_6g079570	48.551	138	67	3	45	180	25	160	9.30e-34	118
MS.gene98972.t1	MTR_5g017550	40.113	177	97	4	12	181	8	182	6.30e-33	117
MS.gene98972.t1	MTR_8g036075	37.500	184	105	4	5	180	10	191	4.50e-32	115
MS.gene98972.t1	MTR_4g067270	42.069	145	82	1	46	188	5	149	5.10e-32	113
MS.gene98972.t1	MTR_4g086260	42.446	139	78	1	45	183	56	192	1.10e-31	114
MS.gene98972.t1	MTR_4g086260	37.879	66	41	0	46	111	128	193	9.77e-11	58.9
MS.gene98972.t1	MTR_7g090450	43.972	141	72	4	46	180	73	212	2.22e-31	114
MS.gene98972.t1	MTR_5g017510	39.665	179	96	6	12	181	8	183	8.03e-31	111
MS.gene98972.t1	MTR_5g017560	39.665	179	96	6	12	181	8	183	8.03e-31	111
MS.gene98972.t1	MTR_0168s0120	50.442	113	56	0	71	183	1	113	2.04e-29	105
MS.gene98972.t1	MTR_0168s0120	50.000	62	31	0	45	106	48	109	3.15e-14	66.2
MS.gene98972.t1	MTR_6g025320	50.442	113	56	0	71	183	1	113	2.04e-29	105
MS.gene98972.t1	MTR_6g025320	50.000	62	31	0	45	106	48	109	3.15e-14	66.2
MS.gene98972.t1	MTR_2g098890	34.409	186	113	3	7	188	30	210	3.87e-28	105
MS.gene98972.t1	MTR_7g089760	42.361	144	81	1	46	187	5	148	3.90e-28	103
MS.gene98972.t1	MTR_5g027000	38.168	131	81	0	47	177	23	153	2.58e-26	99.4
MS.gene98972.t1	MTR_8g066630	37.063	143	87	1	46	185	17	159	1.57e-25	97.4
MS.gene98972.t1	MTR_8g066630	44.286	70	38	1	37	105	83	152	7.40e-12	61.2
MS.gene98972.t1	MTR_3g089070	38.060	134	82	1	47	180	7	139	3.16e-25	95.9
MS.gene98972.t1	MTR_3g089090	38.060	134	82	1	47	180	6	138	3.28e-25	95.9
MS.gene98972.t1	MTR_5g008705	39.370	127	77	0	54	180	2	128	3.51e-25	95.5
MS.gene98972.t1	MTR_6g023460	38.346	133	81	1	49	181	11	142	5.06e-25	95.1
MS.gene98972.t1	MTR_5g008695	40.179	112	65	1	70	179	1	112	1.31e-24	93.6
MS.gene98972.t1	MTR_1g071150	42.424	132	73	2	51	181	17	146	1.42e-24	94.4
MS.gene98972.t1	MTR_1g071150	42.857	70	40	0	37	106	75	144	2.75e-13	64.7
MS.gene98972.t1	MTR_4g115170	38.012	171	87	3	29	180	46	216	1.48e-24	96.3
MS.gene98972.t1	MTR_4g103630	39.259	135	81	1	46	180	6	139	3.85e-23	90.5
MS.gene98972.t1	MTR_7g074020	37.410	139	87	0	42	180	26	164	6.20e-23	90.9
MS.gene98972.t1	MTR_4g103655	39.259	135	81	1	46	180	6	139	6.79e-23	89.7
MS.gene98972.t1	MTR_4g103650	39.259	135	81	1	46	180	2	135	1.39e-22	89.0
MS.gene98972.t1	MTR_6g007613	36.111	144	92	0	42	185	25	168	1.72e-22	89.7
MS.gene98972.t1	MTR_8g078270	38.849	139	75	3	47	180	54	187	4.32e-22	89.0
MS.gene98972.t1	MTR_7g115040	39.850	133	80	0	49	181	15	147	8.89e-22	87.0
MS.gene98972.t1	MTR_4g112460	32.903	155	99	2	47	196	12	166	9.91e-22	87.4
MS.gene98972.t1	MTR_4g112460	46.154	65	35	0	45	109	85	149	1.50e-11	60.5
MS.gene98972.t1	MTR_8g069915	32.374	139	92	1	47	183	13	151	7.69e-20	82.8
MS.gene98972.t1	MTR_8g069915	44.615	65	36	0	45	109	86	150	4.61e-11	59.3
MS.gene98972.t1	MTR_5g011850	33.088	136	89	1	47	182	13	146	4.32e-19	80.1
MS.gene98972.t1	MTR_7g074020	36.000	125	80	0	42	166	26	150	4.39e-19	80.5
MS.gene98972.t1	MTR_7g074020	42.857	63	36	0	118	180	29	91	7.27e-11	58.5
MS.gene98972.t1	MTR_6g007613	35.200	125	81	0	42	166	25	149	2.72e-18	78.2
MS.gene98972.t1	MTR_6g007613	42.857	63	36	0	118	180	28	90	3.69e-11	59.3
MS.gene98972.t1	MTR_7g074240	34.483	174	92	4	19	180	7	170	9.82e-18	77.4
MS.gene98972.t1	MTR_1g030440	34.459	148	81	3	44	181	20	161	3.72e-17	75.5
MS.gene98972.t1	MTR_3g088655	35.135	148	84	4	46	181	8	155	2.42e-16	73.2
MS.gene98972.t1	MTR_5g009830	35.714	140	84	3	47	184	372	507	2.79e-16	76.6
MS.gene98972.t1	MTR_4g132070	35.294	136	82	3	47	180	397	528	7.15e-15	72.4
MS.gene98972.t1	MTR_8g099095	33.571	140	87	3	47	184	372	507	8.94e-15	72.4
MS.gene98972.t1	MTR_1g026190	34.058	138	81	4	47	180	388	519	1.19e-14	72.0
MS.gene98972.t1	MTR_5g079470	49.231	65	32	1	42	106	6	69	4.73e-14	65.1
MS.gene98972.t1	MTR_5g092810	35.507	138	83	3	45	180	396	529	1.81e-13	68.6
MS.gene98972.t1	MTR_3g098090	33.562	146	92	3	47	191	338	479	3.71e-13	67.4
MS.gene98972.t1	MTR_3g098070	33.562	146	92	3	47	191	335	476	4.03e-13	67.4
MS.gene98972.t1	MTR_8g095440	33.562	146	92	3	47	191	336	477	5.65e-13	67.0
MS.gene98972.t1	MTR_3g051770	33.333	144	89	3	47	184	389	531	6.48e-13	67.0
MS.gene98972.t1	MTR_7g068710	34.437	151	91	5	44	190	359	505	6.76e-13	66.6
MS.gene98972.t1	MTR_4g082050	48.571	70	35	1	117	186	75	143	2.54e-12	62.0
MS.gene98972.t1	MTR_3g083460	37.931	87	45	3	104	181	1	87	5.00e-12	60.1
MS.gene98972.t1	MTR_0028s0170	32.143	140	89	3	47	184	384	519	6.26e-12	63.9
MS.gene98972.t1	MTR_1g041150	32.374	139	91	2	47	185	424	559	1.06e-11	63.2
MS.gene98972.t1	MTR_4g132040	31.618	136	87	3	47	180	401	532	1.34e-11	63.2
MS.gene98972.t1	MTR_5g089320	32.394	142	86	4	47	184	374	509	1.67e-11	62.8
MS.gene98972.t1	MTR_3g055570	32.847	137	76	2	47	182	53	174	1.88e-11	60.5
MS.gene98972.t1	MTR_7g011010	35.811	148	78	6	37	180	63	197	2.94e-11	60.5
MS.gene98972.t1	MTR_1g096490	33.088	136	84	3	47	180	336	466	3.02e-11	62.0
MS.gene98972.t1	MTR_5g025690	37.600	125	60	5	60	180	85	195	4.20e-11	60.1
MS.gene98972.t1	MTR_4g107490	29.054	148	103	2	44	190	376	522	5.45e-11	61.2
MS.gene98972.t1	MTR_7g106710	31.429	140	89	3	47	184	441	575	9.21e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene98972.t1	AT1G24620	62.286	175	62	2	10	183	4	175	1.74e-70	212
MS.gene98972.t1	AT1G66400	51.799	139	65	1	45	181	14	152	4.15e-45	147
MS.gene98972.t1	AT1G18210	52.206	136	61	1	45	180	22	153	2.01e-41	138
MS.gene98972.t1	AT1G18210	52.206	136	61	1	45	180	22	153	2.01e-41	138
MS.gene98972.t1	AT1G73630	50.370	135	63	1	46	180	20	150	2.51e-39	132
MS.gene98972.t1	AT5G37770	45.098	153	80	1	32	180	3	155	1.05e-38	130
MS.gene98972.t1	AT5G37770	45.098	153	80	1	32	180	3	155	1.05e-38	130
MS.gene98972.t1	AT2G27030	47.651	149	74	1	42	186	4	152	4.44e-38	130
MS.gene98972.t1	AT5G37780	49.275	138	70	0	46	183	12	149	4.86e-38	129
MS.gene98972.t1	AT5G37780	48.387	62	32	0	45	106	84	145	2.62e-13	65.1
MS.gene98972.t1	AT5G37780	49.254	67	34	0	114	180	7	73	2.68e-12	62.4
MS.gene98972.t1	AT1G66410	49.275	138	70	0	46	183	12	149	4.86e-38	129
MS.gene98972.t1	AT1G66410	48.387	62	32	0	45	106	84	145	2.62e-13	65.1
MS.gene98972.t1	AT1G66410	49.254	67	34	0	114	180	7	73	2.68e-12	62.4
MS.gene98972.t1	AT5G21274	48.966	145	70	1	42	182	4	148	1.14e-37	127
MS.gene98972.t1	AT3G56800	47.945	146	72	1	42	183	4	149	2.34e-37	127
MS.gene98972.t1	AT2G27030	47.945	146	72	1	42	183	4	149	2.34e-37	127
MS.gene98972.t1	AT2G41110	47.945	146	72	1	42	183	4	149	2.34e-37	127
MS.gene98972.t1	AT3G43810	48.276	145	71	1	42	182	4	148	2.64e-37	127
MS.gene98972.t1	AT3G43810	47.619	147	73	1	42	184	4	150	1.15e-36	127
MS.gene98972.t1	AT5G37780	50.806	124	61	0	60	183	13	136	3.52e-34	118
MS.gene98972.t1	AT5G37780	48.387	62	32	0	45	106	71	132	1.82e-13	65.1
MS.gene98972.t1	AT1G66410	51.220	123	60	0	60	182	36	158	3.98e-34	119
MS.gene98972.t1	AT1G66410	48.387	62	32	0	45	106	94	155	2.21e-13	65.5
MS.gene98972.t1	AT5G37780	51.220	123	60	0	60	182	52	174	7.73e-34	119
MS.gene98972.t1	AT5G37780	48.387	62	32	0	45	106	110	171	4.48e-13	65.1
MS.gene98972.t1	AT5G37780	50.806	124	61	0	60	183	41	164	7.78e-34	118
MS.gene98972.t1	AT5G37780	48.387	62	32	0	45	106	99	160	3.22e-13	65.1
MS.gene98972.t1	AT2G41110	44.586	157	71	2	42	182	4	160	9.67e-34	118
MS.gene98972.t1	AT3G22930	44.118	136	76	0	46	181	35	170	4.89e-33	117
MS.gene98972.t1	AT3G22930	46.774	62	33	0	45	106	107	168	2.01e-12	63.2
MS.gene98972.t1	AT4G14640	43.357	143	80	1	39	181	7	148	1.42e-32	115
MS.gene98972.t1	AT2G15680	39.716	141	79	2	46	184	50	186	5.08e-32	114
MS.gene98972.t1	AT2G15680	46.032	63	34	0	44	106	119	181	3.02e-14	68.2
MS.gene98972.t1	AT3G10190	41.139	158	86	4	25	180	53	205	1.40e-31	114
MS.gene98972.t1	AT2G43290	42.953	149	78	2	46	187	65	213	5.70e-31	112
MS.gene98972.t1	AT3G07490	40.690	145	84	1	46	188	5	149	3.48e-30	108
MS.gene98972.t1	AT1G66410	51.327	113	55	0	71	183	1	113	3.91e-30	107
MS.gene98972.t1	AT1G66410	48.387	62	32	0	45	106	48	109	1.27e-13	64.7
MS.gene98972.t1	AT1G66410	51.327	113	55	0	71	183	1	113	3.91e-30	107
MS.gene98972.t1	AT1G66410	48.387	62	32	0	45	106	48	109	1.27e-13	64.7
MS.gene98972.t1	AT5G17470	40.714	140	81	1	47	184	3	142	5.18e-30	108
MS.gene98972.t1	AT3G43810	50.442	113	56	0	71	183	1	113	2.14e-29	105
MS.gene98972.t1	AT3G43810	50.000	62	31	0	45	106	48	109	3.30e-14	66.2
MS.gene98972.t1	AT3G43810	50.442	113	56	0	71	183	1	113	2.14e-29	105
MS.gene98972.t1	AT3G43810	50.000	62	31	0	45	106	48	109	3.30e-14	66.2
MS.gene98972.t1	AT4G12860	42.069	145	82	1	46	188	5	149	2.57e-29	106
MS.gene98972.t1	AT4G14640	44.262	122	68	0	60	181	9	130	9.77e-29	104
MS.gene98972.t1	AT4G14640	45.161	62	34	0	45	106	67	128	2.09e-12	62.0
MS.gene98972.t1	AT1G05990	42.466	146	81	2	46	188	5	150	1.06e-28	105
MS.gene98972.t1	AT2G41090	41.892	148	82	2	39	186	6	149	1.83e-27	103
MS.gene98972.t1	AT3G50360	35.862	145	93	0	42	186	23	167	2.39e-27	102
MS.gene98972.t1	AT3G50770	34.254	181	111	4	5	180	26	203	6.40e-27	102
MS.gene98972.t1	AT2G41100	41.509	159	73	3	42	182	63	219	6.69e-27	103
MS.gene98972.t1	AT2G41100	36.220	127	65	2	70	180	1	127	1.85e-16	75.9
MS.gene98972.t1	AT2G41100	41.509	159	73	3	42	182	63	219	6.69e-27	103
MS.gene98972.t1	AT2G41100	36.220	127	65	2	70	180	1	127	1.85e-16	75.9
MS.gene98972.t1	AT2G41100	41.509	159	73	3	42	182	63	219	6.69e-27	103
MS.gene98972.t1	AT2G41100	36.220	127	65	2	70	180	1	127	1.85e-16	75.9
MS.gene98972.t1	AT2G41100	41.509	159	73	3	42	182	98	254	1.05e-26	104
MS.gene98972.t1	AT2G41100	40.000	155	76	3	42	180	9	162	1.50e-25	101
MS.gene98972.t1	AT2G41100	41.509	159	73	3	42	182	98	254	1.05e-26	104
MS.gene98972.t1	AT2G41100	40.000	155	76	3	42	180	9	162	1.50e-25	101
MS.gene98972.t1	AT3G59440	41.549	142	80	2	46	185	51	191	1.06e-26	101
MS.gene98972.t1	AT4G03290	40.816	147	82	2	46	187	5	151	2.88e-26	99.0
MS.gene98972.t1	AT2G41410	37.324	142	86	3	43	181	67	208	1.26e-25	99.0
MS.gene98972.t1	AT1G32250	35.616	146	88	2	46	185	16	161	1.35e-24	95.1
MS.gene98972.t1	AT1G32250	49.153	59	30	0	45	103	94	152	2.67e-11	60.1
MS.gene98972.t1	AT3G03400	37.209	129	79	1	47	173	6	134	1.16e-23	91.7
MS.gene98972.t1	AT5G42380	36.765	136	85	1	46	180	49	184	4.90e-22	89.0
MS.gene98972.t1	AT2G36180	36.806	144	81	3	47	184	1	140	1.79e-21	86.3
MS.gene98972.t1	AT4G37010	31.724	145	99	0	42	186	23	167	5.97e-21	85.5
MS.gene98972.t1	AT4G37010	31.724	145	99	0	42	186	27	171	6.09e-21	85.5
MS.gene98972.t1	AT3G25600	32.374	139	92	1	47	183	13	151	9.67e-21	84.7
MS.gene98972.t1	AT3G22930	44.211	95	53	0	46	140	35	129	1.11e-19	81.3
MS.gene98972.t1	AT3G03000	37.589	141	87	1	46	185	20	160	3.30e-19	80.9
MS.gene98972.t1	AT3G03000	44.286	70	38	1	40	108	87	156	1.52e-12	63.2
MS.gene98972.t1	AT4G14640	42.308	104	59	1	39	142	7	109	3.42e-19	79.7
MS.gene98972.t1	AT1G18530	31.655	139	93	1	47	183	8	146	3.57e-19	80.5
MS.gene98972.t1	AT1G18530	43.939	66	37	0	44	109	80	145	1.74e-11	60.1
MS.gene98972.t1	AT2G41100	39.231	130	60	2	71	182	1	129	4.57e-19	81.3
MS.gene98972.t1	AT2G41100	49.254	67	30	1	42	104	58	124	2.29e-12	63.5
MS.gene98972.t1	AT3G03410	32.593	135	82	1	48	182	4	129	5.84e-18	76.6
MS.gene98972.t1	AT3G51920	31.206	141	97	0	45	185	11	151	6.89e-18	77.0
MS.gene98972.t1	AT1G76650	34.074	135	88	1	46	180	43	176	3.16e-17	75.9
MS.gene98972.t1	AT1G76650	34.074	135	88	1	46	180	43	176	3.16e-17	75.9
MS.gene98972.t1	AT1G62820	32.353	136	90	1	47	182	14	147	4.58e-17	74.7
MS.gene98972.t1	AT1G76640	32.117	137	91	1	46	180	22	158	2.21e-16	73.2
MS.gene98972.t1	AT1G21550	34.416	154	77	6	44	181	8	153	5.67e-16	72.0
MS.gene98972.t1	AT1G12310	31.618	136	91	1	47	182	14	147	5.74e-16	72.0
MS.gene98972.t1	AT3G20410	34.507	142	83	4	47	184	397	532	2.39e-15	73.9
MS.gene98972.t1	AT3G20410	34.507	142	83	4	47	184	397	532	2.39e-15	73.9
MS.gene98972.t1	AT4G20780	32.370	173	92	4	28	180	16	183	3.00e-15	71.2
MS.gene98972.t1	AT3G03430	49.254	67	31	2	44	108	5	70	3.62e-15	68.2
MS.gene98972.t1	AT4G23650	35.714	140	84	3	47	184	384	519	5.54e-15	72.8
MS.gene98972.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.98e-14	71.2
MS.gene98972.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.98e-14	71.2
MS.gene98972.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.98e-14	71.2
MS.gene98972.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.98e-14	71.2
MS.gene98972.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.98e-14	71.2
MS.gene98972.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.98e-14	71.2
MS.gene98972.t1	AT4G21940	34.783	138	80	4	47	180	407	538	2.29e-14	71.2
MS.gene98972.t1	AT4G21940	34.783	138	80	4	47	180	407	538	2.31e-14	71.2
MS.gene98972.t1	AT4G04720	34.783	138	80	4	47	180	385	516	2.43e-14	71.2
MS.gene98972.t1	AT4G04720	34.783	138	80	4	47	180	385	516	2.43e-14	71.2
MS.gene98972.t1	AT4G04695	33.333	138	82	4	47	180	337	468	1.04e-13	69.3
MS.gene98972.t1	AT1G76040	35.294	136	82	3	47	180	179	310	1.22e-13	68.6
MS.gene98972.t1	AT1G76040	35.294	136	82	3	47	180	179	310	1.22e-13	68.6
MS.gene98972.t1	AT1G76650	32.593	135	80	2	46	180	43	166	1.28e-13	66.2
MS.gene98972.t1	AT1G76040	35.294	136	82	3	47	180	417	548	1.32e-13	68.9
MS.gene98972.t1	AT1G50700	32.394	142	86	4	47	184	379	514	1.37e-13	68.9
MS.gene98972.t1	AT1G61950	36.029	136	81	3	47	180	405	536	2.10e-13	68.2
MS.gene98972.t1	AT4G04700	33.333	138	82	4	47	180	337	468	4.07e-13	67.4
MS.gene98972.t1	AT5G19360	34.058	138	89	2	47	184	374	509	6.17e-13	67.0
MS.gene98972.t1	AT2G41100	53.968	63	28	1	42	104	9	70	6.82e-13	63.5
MS.gene98972.t1	AT2G41860	29.268	164	114	2	33	195	346	508	9.15e-13	66.6
MS.gene98972.t1	AT2G41860	29.268	164	114	2	33	195	346	508	9.97e-13	66.2
MS.gene98972.t1	AT5G23580	35.075	134	84	2	47	180	328	458	1.07e-12	66.2
MS.gene98972.t1	AT5G44460	32.258	186	93	5	10	180	7	174	1.08e-12	63.9
MS.gene98972.t1	AT3G51850	31.333	150	97	3	44	190	357	503	1.57e-12	65.9
MS.gene98972.t1	AT3G10660	33.333	141	90	3	47	186	492	629	1.71e-12	65.9
MS.gene98972.t1	AT3G10660	33.333	141	90	3	47	186	492	629	1.71e-12	65.9
MS.gene98972.t1	AT4G09570	35.075	134	84	3	47	180	331	461	3.18e-12	64.7
MS.gene98972.t1	AT5G17480	46.154	65	32	2	44	106	5	68	3.23e-12	60.5
MS.gene98972.t1	AT5G12180	33.333	138	90	2	47	184	379	514	3.36e-12	64.7
MS.gene98972.t1	AT1G35670	34.328	134	85	3	47	180	332	462	4.55e-12	64.3
MS.gene98972.t1	AT2G17290	33.103	145	94	2	47	191	391	532	4.55e-12	64.3
MS.gene98972.t1	AT2G17290	33.103	145	94	2	47	191	391	532	4.55e-12	64.3
MS.gene98972.t1	AT5G12480	30.872	149	94	4	47	190	271	415	5.89e-12	63.9
MS.gene98972.t1	AT5G12480	30.872	149	94	4	47	190	365	509	7.86e-12	63.9
MS.gene98972.t1	AT3G57530	32.867	143	89	4	51	190	373	511	3.09e-11	62.0
MS.gene98972.t1	AT4G35310	32.414	145	95	2	47	191	403	544	6.78e-11	60.8
MS.gene98972.t1	AT4G35310	32.414	145	95	2	47	191	403	544	6.78e-11	60.8

Find 53 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAATCTCTTCTTCCGAATT+AGG	0.095355	1.4:-16918509	MS.gene98972:CDS
CATTGATCCCAATGAAATTT+TGG	0.133220	1.4:-16918360	MS.gene98972:CDS
GAGAAGAAGATGTTGTATTT+TGG	0.231655	1.4:+16918651	None:intergenic
TGTCCAATTCACCGAGGATT+TGG	0.299151	1.4:-16918570	MS.gene98972:CDS
TCAAGTTCTTCTTCCGTTGC+GGG	0.300338	1.4:+16918461	None:intergenic
TTCATTGGGATCAATGTCTT+TGG	0.310894	1.4:+16918367	None:intergenic
AAATCTCTTCTTCCGAATTA+GGG	0.322266	1.4:-16918508	MS.gene98972:CDS
AGGATTTGGAGCACGTGTTT+CGG	0.338456	1.4:-16918556	MS.gene98972:CDS
GAGATTCTCCAAAATTTCAT+TGG	0.345191	1.4:+16918352	None:intergenic
GCTCCAAATCCTCGGTGAAT+TGG	0.365616	1.4:+16918567	None:intergenic
ATGATGATGGGCTCCAACTT+TGG	0.384568	1.4:-16918155	MS.gene98972:CDS
AGAGAGAAAGGTTGTGTTTG+TGG	0.388508	1.4:+16918616	None:intergenic
CGAGGAGTTGCACAATGTTA+TGG	0.413764	1.4:-16918279	MS.gene98972:CDS
AGATTCTCCAAAATTTCATT+GGG	0.423292	1.4:+16918353	None:intergenic
TCCCATGATGGACCCTAATT+CGG	0.427372	1.4:+16918496	None:intergenic
CTTCCGTTGCGGGTTGCCCT+AGG	0.428739	1.4:+16918471	None:intergenic
TTGCCCTAGGCTTCCCATGA+TGG	0.458964	1.4:+16918484	None:intergenic
TTTCGGAAATTTGACGTTAA+CGG	0.462387	1.4:-16918539	MS.gene98972:CDS
AAATTTGACGTTAACGGTGA+TGG	0.462461	1.4:-16918533	MS.gene98972:CDS
GTGTTTGTGGTTACCTCTGT+TGG	0.465968	1.4:+16918629	None:intergenic
CGGTGAATTGGACACGCGAT+TGG	0.470768	1.4:+16918579	None:intergenic
AGAGTTTAAGAAGATGATGA+TGG	0.472134	1.4:-16918168	MS.gene98972:CDS
CACAATGTTATGGTGAGTCT+TGG	0.485493	1.4:-16918269	MS.gene98972:CDS
ATCAAGTTCTTCTTCCGTTG+CGG	0.486447	1.4:+16918460	None:intergenic
AGACGTGGTACGAGAGAGAA+AGG	0.501954	1.4:+16918604	None:intergenic
TCTTTCCATCGATCCAAAGT+TGG	0.502885	1.4:+16918142	None:intergenic
GGGTCCATCATGGGAAGCCT+AGG	0.503207	1.4:-16918488	MS.gene98972:CDS
GCCGAGTGTCAAAAGATGAT+AGG	0.504864	1.4:-16918230	MS.gene98972:CDS
CACCATCAGCATCAACCTCA+TGG	0.507228	1.4:+16918429	None:intergenic
GTTTCTTCTTTCGATGGAAG+AGG	0.513153	1.4:+16918675	None:intergenic
TCTTTCGATGGAAGAGGGAT+CGG	0.518598	1.4:+16918681	None:intergenic
TTTGGAGTTTCTTCTTTCGA+TGG	0.518621	1.4:+16918669	None:intergenic
TTCCGAATTAGGGTCCATCA+TGG	0.520934	1.4:-16918498	MS.gene98972:CDS
AAGCCTAGGGCAACCCGCAA+CGG	0.523083	1.4:-16918474	MS.gene98972:CDS
GGGCTCCAACTTTGGATCGA+TGG	0.532367	1.4:-16918147	MS.gene98972:CDS
CATAACATTGTGCAACTCCT+CGG	0.559869	1.4:+16918280	None:intergenic
TTTCTTCTTTCGATGGAAGA+GGG	0.564860	1.4:+16918676	None:intergenic
TCCGAATTAGGGTCCATCAT+GGG	0.579175	1.4:-16918497	MS.gene98972:CDS
AAATGGTTCTATATCGGCCG+AGG	0.580978	1.4:-16918297	MS.gene98972:CDS
GGCGTTGATAGCGACGGTGA+TGG	0.588528	1.4:-16918206	MS.gene98972:CDS
AAACACGTGCTCCAAATCCT+CGG	0.589055	1.4:+16918559	None:intergenic
AACATCTTCTTCTCCAACAG+AGG	0.592280	1.4:-16918642	MS.gene98972:CDS
GAGTTTAAGAAGATGATGAT+GGG	0.596390	1.4:-16918167	MS.gene98972:CDS
GAGGTTGATGCTGATGGTGA+TGG	0.598289	1.4:-16918425	MS.gene98972:CDS
ATCCATGAGGTTGATGCTGA+TGG	0.608988	1.4:-16918431	MS.gene98972:CDS
GGTCCATCATGGGAAGCCTA+GGG	0.616679	1.4:-16918487	MS.gene98972:CDS
TTAACTCAATAAACTCCTCG+AGG	0.658756	1.4:+16918393	None:intergenic
GAGTGTCAAAAGATGATAGG+CGG	0.691494	1.4:-16918227	MS.gene98972:CDS
ATAGGCGGCGTTGATAGCGA+CGG	0.701502	1.4:-16918212	MS.gene98972:CDS
ACTTGATAATATGATCCATG+AGG	0.725643	1.4:-16918444	MS.gene98972:CDS
TGATGGTCACATCAACCTCG+AGG	0.737999	1.4:-16918408	MS.gene98972:CDS
GACACGCGATTGGAGAGACG+TGG	0.738436	1.4:+16918589	None:intergenic
ATCGCGTGTCCAATTCACCG+AGG	0.788226	1.4:-16918576	MS.gene98972:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTGTCAATATCAAAAA+CGG	+	chr1.4:16918491-16918510	None:intergenic	15.0%
!!!	GTTTTTGATATTGACAAAAA+TGG	-	chr1.4:16918490-16918509	MS.gene98972:CDS	20.0%
!	AGATTCTCCAAAATTTCATT+GGG	+	chr1.4:16918454-16918473	None:intergenic	25.0%
!!	TGACAAAAATGGTTCTATAT+CGG	-	chr1.4:16918501-16918520	MS.gene98972:CDS	25.0%
	AAAATCTCTTCTTCCGAATT+AGG	-	chr1.4:16918295-16918314	MS.gene98972:CDS	30.0%
	AAATCTCTTCTTCCGAATTA+GGG	-	chr1.4:16918296-16918315	MS.gene98972:CDS	30.0%
	AGAGTTTAAGAAGATGATGA+TGG	-	chr1.4:16918636-16918655	MS.gene98972:CDS	30.0%
	GAGATTCTCCAAAATTTCAT+TGG	+	chr1.4:16918455-16918474	None:intergenic	30.0%
	GAGTTTAAGAAGATGATGAT+GGG	-	chr1.4:16918637-16918656	MS.gene98972:CDS	30.0%
	TTTCGGAAATTTGACGTTAA+CGG	-	chr1.4:16918265-16918284	MS.gene98972:CDS	30.0%
!	ACTTGATAATATGATCCATG+AGG	-	chr1.4:16918360-16918379	MS.gene98972:CDS	30.0%
!	CATTGATCCCAATGAAATTT+TGG	-	chr1.4:16918444-16918463	MS.gene98972:CDS	30.0%
!	GAGAAGAAGATGTTGTATTT+TGG	+	chr1.4:16918156-16918175	None:intergenic	30.0%
	AAATTTGACGTTAACGGTGA+TGG	-	chr1.4:16918271-16918290	MS.gene98972:CDS	35.0%
	TTAACTCAATAAACTCCTCG+AGG	+	chr1.4:16918414-16918433	None:intergenic	35.0%
	TTCATTGGGATCAATGTCTT+TGG	+	chr1.4:16918440-16918459	None:intergenic	35.0%
	TTTCTTCTTTCGATGGAAGA+GGG	+	chr1.4:16918131-16918150	None:intergenic	35.0%
!	TTTGGAGTTTCTTCTTTCGA+TGG	+	chr1.4:16918138-16918157	None:intergenic	35.0%
	AACATCTTCTTCTCCAACAG+AGG	-	chr1.4:16918162-16918181	MS.gene98972:CDS	40.0%
	AGAGAGAAAGGTTGTGTTTG+TGG	+	chr1.4:16918191-16918210	None:intergenic	40.0%
	ATCAAGTTCTTCTTCCGTTG+CGG	+	chr1.4:16918347-16918366	None:intergenic	40.0%
	CACAATGTTATGGTGAGTCT+TGG	-	chr1.4:16918535-16918554	MS.gene98972:CDS	40.0%
	CATAACATTGTGCAACTCCT+CGG	+	chr1.4:16918527-16918546	None:intergenic	40.0%
	GAGTGTCAAAAGATGATAGG+CGG	-	chr1.4:16918577-16918596	MS.gene98972:CDS	40.0%
	GTTTCTTCTTTCGATGGAAG+AGG	+	chr1.4:16918132-16918151	None:intergenic	40.0%
	TCTTTCCATCGATCCAAAGT+TGG	+	chr1.4:16918665-16918684	None:intergenic	40.0%
!	GCCTATCATCTTTTGACACT+CGG	+	chr1.4:16918578-16918597	None:intergenic	40.0%
	AAACACGTGCTCCAAATCCT+CGG	+	chr1.4:16918248-16918267	None:intergenic	45.0%
	CGAGGAGTTGCACAATGTTA+TGG	-	chr1.4:16918525-16918544	MS.gene98972:CDS	45.0%
	GCCGAGTGTCAAAAGATGAT+AGG	-	chr1.4:16918574-16918593	MS.gene98972:CDS	45.0%
	GTGTTTGTGGTTACCTCTGT+TGG	+	chr1.4:16918178-16918197	None:intergenic	45.0%
	TCAAGTTCTTCTTCCGTTGC+GGG	+	chr1.4:16918346-16918365	None:intergenic	45.0%
	TCCGAATTAGGGTCCATCAT+GGG	-	chr1.4:16918307-16918326	MS.gene98972:CDS	45.0%
	TCTTTCGATGGAAGAGGGAT+CGG	+	chr1.4:16918126-16918145	None:intergenic	45.0%
	TGTCCAATTCACCGAGGATT+TGG	-	chr1.4:16918234-16918253	MS.gene98972:CDS	45.0%
	TTCCGAATTAGGGTCCATCA+TGG	-	chr1.4:16918306-16918325	MS.gene98972:CDS	45.0%
!	AAATGGTTCTATATCGGCCG+AGG	-	chr1.4:16918507-16918526	MS.gene98972:CDS	45.0%
!	AGGATTTGGAGCACGTGTTT+CGG	-	chr1.4:16918248-16918267	MS.gene98972:CDS	45.0%
!!	ATCCATGAGGTTGATGCTGA+TGG	-	chr1.4:16918373-16918392	MS.gene98972:CDS	45.0%
!!	ATGATGATGGGCTCCAACTT+TGG	-	chr1.4:16918649-16918668	MS.gene98972:CDS	45.0%
!!	TCCCATGATGGACCCTAATT+CGG	+	chr1.4:16918311-16918330	None:intergenic	45.0%
	AGACGTGGTACGAGAGAGAA+AGG	+	chr1.4:16918203-16918222	None:intergenic	50.0%
	CACCATCAGCATCAACCTCA+TGG	+	chr1.4:16918378-16918397	None:intergenic	50.0%
	GCTCCAAATCCTCGGTGAAT+TGG	+	chr1.4:16918240-16918259	None:intergenic	50.0%
	TGATGGTCACATCAACCTCG+AGG	-	chr1.4:16918396-16918415	MS.gene98972:CDS	50.0%
!	CATCTTTTGACACTCGGCGA+GGG	+	chr1.4:16918572-16918591	None:intergenic	50.0%
!	TCATCTTTTGACACTCGGCG+AGG	+	chr1.4:16918573-16918592	None:intergenic	50.0%
!!	GAGGTTGATGCTGATGGTGA+TGG	-	chr1.4:16918379-16918398	MS.gene98972:CDS	50.0%
	ATCGCGTGTCCAATTCACCG+AGG	-	chr1.4:16918228-16918247	MS.gene98972:CDS	55.0%
	CGGTGAATTGGACACGCGAT+TGG	+	chr1.4:16918228-16918247	None:intergenic	55.0%
	GGGCTCCAACTTTGGATCGA+TGG	-	chr1.4:16918657-16918676	MS.gene98972:CDS	55.0%
	GGTCCATCATGGGAAGCCTA+GGG	-	chr1.4:16918317-16918336	MS.gene98972:CDS	55.0%
	TTGCCCTAGGCTTCCCATGA+TGG	+	chr1.4:16918323-16918342	None:intergenic	55.0%
!!	ATAGGCGGCGTTGATAGCGA+CGG	-	chr1.4:16918592-16918611	MS.gene98972:CDS	55.0%
	AAGCCTAGGGCAACCCGCAA+CGG	-	chr1.4:16918330-16918349	MS.gene98972:CDS	60.0%
	GACACGCGATTGGAGAGACG+TGG	+	chr1.4:16918218-16918237	None:intergenic	60.0%
	GGGTCCATCATGGGAAGCCT+AGG	-	chr1.4:16918316-16918335	MS.gene98972:CDS	60.0%
!!	GGCGTTGATAGCGACGGTGA+TGG	-	chr1.4:16918598-16918617	MS.gene98972:CDS	60.0%
!	CTTCCGTTGCGGGTTGCCCT+AGG	+	chr1.4:16918336-16918355	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	16918115	16918711	16918115	ID=MS.gene98972
chr1.4	mRNA	16918115	16918711	16918115	ID=MS.gene98972.t1;Parent=MS.gene98972
chr1.4	exon	16918115	16918711	16918115	ID=MS.gene98972.t1.exon1;Parent=MS.gene98972.t1
chr1.4	CDS	16918115	16918711	16918115	ID=cds.MS.gene98972.t1;Parent=MS.gene98972.t1

Gene Sequence

>MS.gene98972

ATGGGTTTCCGATCCCTCTTCCATCGAAAGAAGAAACTCCAAAATACAACATCTTCTTCTCCAACAGAGGTAACCACAAACACAACCTTTCTCTCTCGTACCACGTCTCTCCAATCGCGTGTCCAATTCACCGAGGATTTGGAGCACGTGTTTCGGAAATTTGACGTTAACGGTGATGGCAAAATCTCTTCTTCCGAATTAGGGTCCATCATGGGAAGCCTAGGGCAACCCGCAACGGAAGAAGAACTTGATAATATGATCCATGAGGTTGATGCTGATGGTGATGGTCACATCAACCTCGAGGAGTTTATTGAGTTAAACACCAAAGACATTGATCCCAATGAAATTTTGGAGAATCTCAAAGATGCATTTTCCGTTTTTGATATTGACAAAAATGGTTCTATATCGGCCGAGGAGTTGCACAATGTTATGGTGAGTCTTGGAGATCAATGCTCCCTCGCCGAGTGTCAAAAGATGATAGGCGGCGTTGATAGCGACGGTGATGGAATGATTGATTTTGAAGAGTTTAAGAAGATGATGATGGGCTCCAACTTTGGATCGATGGAAAGAACTAATCAAGTTGATAGCGAAACATGA

Protein sequence

>MS.gene98972.t1

MGFRSLFHRKKKLQNTTSSSPTEVTTNTTFLSRTTSLQSRVQFTEDLEHVFRKFDVNGDGKISSSELGSIMGSLGQPATEEELDNMIHEVDADGDGHINLEEFIELNTKDIDPNEILENLKDAFSVFDIDKNGSISAEELHNVMVSLGDQCSLAECQKMIGGVDSDGDGMIDFEEFKKMMMGSNFGSMERTNQVDSET