AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92775


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92775.t1 MTR_7g074020 98.830 171 2 0 1 171 1 171 2.10e-123 344
MS.gene92775.t1 MTR_6g007613 92.308 169 13 0 3 171 2 170 7.84e-114 320
MS.gene92775.t1 MTR_7g074020 98.013 151 3 0 1 151 1 151 1.00e-105 299
MS.gene92775.t1 MTR_6g007613 92.617 149 11 0 3 151 2 150 5.32e-99 282
MS.gene92775.t1 MTR_5g088320 44.755 143 79 0 22 164 4 146 9.96e-39 129
MS.gene92775.t1 MTR_5g088320 46.970 66 35 0 29 94 84 149 3.42e-12 61.2
MS.gene92775.t1 MTR_6g025320 44.755 143 79 0 22 164 4 146 2.35e-38 128
MS.gene92775.t1 MTR_6g025320 46.970 66 35 0 29 94 84 149 3.60e-12 61.2
MS.gene92775.t1 MTR_1g076650 43.151 146 83 0 21 166 3 148 2.59e-38 128
MS.gene92775.t1 MTR_7g087610 44.056 143 80 0 22 164 4 146 6.47e-38 127
MS.gene92775.t1 MTR_7g087610 48.485 66 34 0 29 94 84 149 7.10e-13 63.2
MS.gene92775.t1 MTR_1g041285 44.521 146 81 0 23 168 5 150 4.87e-37 125
MS.gene92775.t1 MTR_1g071150 38.776 147 87 2 21 165 3 148 5.76e-28 102
MS.gene92775.t1 MTR_1g071150 41.667 72 38 1 20 91 78 145 7.81e-11 57.8
MS.gene92775.t1 MTR_0168s0120 42.727 110 63 0 55 164 1 110 9.84e-27 97.8
MS.gene92775.t1 MTR_0168s0120 46.970 66 35 0 29 94 48 113 1.10e-12 61.6
MS.gene92775.t1 MTR_6g025320 42.727 110 63 0 55 164 1 110 9.84e-27 97.8
MS.gene92775.t1 MTR_6g025320 46.970 66 35 0 29 94 48 113 1.10e-12 61.6
MS.gene92775.t1 MTR_1g032070 37.410 139 87 0 26 164 42 180 6.48e-23 90.5
MS.gene92775.t1 MTR_7g106710 34.965 143 90 2 22 164 432 571 3.17e-22 92.8
MS.gene92775.t1 MTR_7g115040 36.986 146 92 0 22 167 4 149 6.07e-22 86.7
MS.gene92775.t1 MTR_1g055255 35.417 144 90 2 22 165 421 561 1.25e-21 91.3
MS.gene92775.t1 MTR_8g105230 35.915 142 90 1 30 171 36 176 1.31e-21 87.0
MS.gene92775.t1 MTR_8g105230 49.153 59 30 0 29 87 108 166 3.35e-13 64.7
MS.gene92775.t1 MTR_4g067270 32.394 142 94 1 30 169 5 146 3.61e-21 84.7
MS.gene92775.t1 MTR_3g067610 36.429 140 85 2 28 167 3 138 7.40e-21 83.6
MS.gene92775.t1 MTR_3g067610 38.961 77 47 0 16 92 60 136 3.04e-12 61.2
MS.gene92775.t1 MTR_8g095440 36.620 142 87 2 23 164 328 466 1.39e-20 88.2
MS.gene92775.t1 MTR_7g075040 36.986 146 83 4 30 166 47 192 2.04e-20 84.0
MS.gene92775.t1 MTR_8g107110 34.559 136 88 1 30 165 24 158 2.27e-20 83.2
MS.gene92775.t1 MTR_5g079340 34.815 135 87 1 30 164 4 137 4.95e-20 81.6
MS.gene92775.t1 MTR_3g098070 35.915 142 88 2 23 164 327 465 6.09e-20 86.3
MS.gene92775.t1 MTR_8g066630 29.114 158 109 1 15 169 2 159 8.22e-20 81.6
MS.gene92775.t1 MTR_8g036075 36.364 143 83 3 30 164 49 191 1.17e-19 82.0
MS.gene92775.t1 MTR_5g092810 36.913 149 84 4 22 166 389 531 1.43e-19 85.1
MS.gene92775.t1 MTR_3g098090 37.313 134 81 2 31 164 338 468 2.45e-19 84.3
MS.gene92775.t1 MTR_5g009830 33.803 142 92 2 23 164 364 503 3.67e-19 84.0
MS.gene92775.t1 MTR_8g099095 34.266 143 92 2 22 164 363 503 4.58e-19 83.6
MS.gene92775.t1 MTR_5g011850 29.577 142 98 1 23 164 5 144 2.05e-18 77.4
MS.gene92775.t1 MTR_1g096490 32.394 142 93 2 23 164 328 466 2.59e-18 81.6
MS.gene92775.t1 MTR_5g099240 32.394 142 93 2 23 164 394 532 6.36e-18 80.5
MS.gene92775.t1 MTR_5g099240 32.394 142 93 2 23 164 322 460 6.59e-18 80.5
MS.gene92775.t1 MTR_7g106710 33.846 130 83 2 22 151 432 558 9.79e-18 80.1
MS.gene92775.t1 MTR_1g041150 33.099 142 92 2 23 164 416 554 1.11e-17 79.7
MS.gene92775.t1 MTR_4g112460 30.657 137 93 2 30 164 11 147 1.24e-17 75.9
MS.gene92775.t1 MTR_0028s0170 34.266 143 90 3 23 164 376 515 1.39e-17 79.3
MS.gene92775.t1 MTR_5g089320 32.867 143 92 3 23 164 366 505 2.54e-17 78.6
MS.gene92775.t1 MTR_1g046950 31.387 137 92 1 30 164 4 140 4.00e-17 73.9
MS.gene92775.t1 MTR_1g046950 39.394 66 40 0 27 92 76 141 1.41e-11 59.3
MS.gene92775.t1 MTR_4g086260 31.013 158 106 2 14 171 41 195 4.33e-17 75.1
MS.gene92775.t1 MTR_4g107490 33.113 151 97 4 22 170 370 518 6.22e-17 77.8
MS.gene92775.t1 MTR_4g132070 33.562 146 93 3 22 166 388 530 6.73e-17 77.4
MS.gene92775.t1 MTR_1g026190 33.103 145 91 3 22 164 379 519 3.44e-16 75.5
MS.gene92775.t1 MTR_7g090450 31.081 148 97 3 23 165 66 213 3.54e-16 73.2
MS.gene92775.t1 MTR_8g078270 31.690 142 95 2 24 164 47 187 6.01e-16 72.0
MS.gene92775.t1 MTR_4g132040 35.766 137 84 3 31 166 401 534 1.31e-15 73.9
MS.gene92775.t1 MTR_1g054865 29.054 148 102 2 22 169 458 602 1.58e-15 73.6
MS.gene92775.t1 MTR_7g089760 31.690 142 95 1 30 169 5 146 1.77e-15 70.1
MS.gene92775.t1 MTR_5g017510 34.028 144 90 4 25 165 43 184 2.47e-15 70.5
MS.gene92775.t1 MTR_5g017560 34.028 144 90 4 25 165 43 184 2.47e-15 70.5
MS.gene92775.t1 MTR_5g017550 33.099 142 93 2 25 165 43 183 2.80e-15 70.1
MS.gene92775.t1 MTR_8g069915 26.573 143 103 1 24 164 6 148 5.93e-15 68.9
MS.gene92775.t1 MTR_3g051770 33.548 155 88 5 22 166 380 529 7.64e-15 71.6
MS.gene92775.t1 MTR_7g068710 30.201 149 102 2 23 170 354 501 1.91e-14 70.5
MS.gene92775.t1 MTR_7g074240 29.333 150 92 3 31 167 25 173 2.03e-14 67.8
MS.gene92775.t1 MTR_6g079570 43.077 65 37 0 31 95 100 164 6.35e-14 66.2
MS.gene92775.t1 MTR_6g079570 29.932 147 93 3 30 171 26 167 7.22e-12 60.8
MS.gene92775.t1 MTR_2g098890 29.167 144 98 2 30 169 64 207 1.85e-13 65.9
MS.gene92775.t1 MTR_1g047100 30.657 137 92 2 30 164 4 139 2.44e-13 63.9
MS.gene92775.t1 MTR_1g047100 38.806 67 41 0 27 93 75 141 6.22e-11 57.8
MS.gene92775.t1 MTR_3g089070 31.250 128 87 1 38 165 14 140 5.90e-13 63.2
MS.gene92775.t1 MTR_3g089090 31.250 128 87 1 38 165 13 139 5.96e-13 63.2
MS.gene92775.t1 MTR_3g055570 30.137 146 87 1 23 168 45 175 9.19e-13 63.5
MS.gene92775.t1 MTR_4g103650 30.147 136 94 1 30 165 2 136 2.51e-12 61.2
MS.gene92775.t1 MTR_3g055520 29.787 141 84 1 23 163 45 170 4.14e-12 61.6
MS.gene92775.t1 MTR_3g083470 41.176 68 40 0 24 91 150 217 6.27e-12 62.0
MS.gene92775.t1 MTR_4g115170 28.750 160 94 4 28 168 62 220 6.37e-12 62.0
MS.gene92775.t1 MTR_5g008705 30.952 126 83 2 37 160 1 124 9.33e-12 59.7
MS.gene92775.t1 MTR_4g103630 29.630 135 94 1 30 164 6 139 1.52e-11 59.3
MS.gene92775.t1 MTR_6g023460 29.771 131 91 1 34 164 12 141 1.69e-11 59.3
MS.gene92775.t1 MTR_4g103655 29.412 136 95 1 30 165 6 140 3.10e-11 58.5
MS.gene92775.t1 MTR_1g052530 28.477 151 104 4 22 170 349 497 7.19e-11 60.1
MS.gene92775.t1 MTR_3g055585 30.216 139 82 1 23 161 45 168 7.52e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92775.t1 AT3G50360 75.449 167 39 1 3 169 2 166 3.16e-82 240
MS.gene92775.t1 AT4G37010 63.871 155 55 1 16 169 16 170 1.98e-65 198
MS.gene92775.t1 AT4G37010 63.871 155 55 1 16 169 12 166 2.37e-65 197
MS.gene92775.t1 AT5G37780 44.755 143 79 0 22 164 4 146 3.26e-39 130
MS.gene92775.t1 AT5G37780 48.485 66 34 0 29 94 84 149 1.01e-12 62.8
MS.gene92775.t1 AT1G66410 44.755 143 79 0 22 164 4 146 3.26e-39 130
MS.gene92775.t1 AT1G66410 48.485 66 34 0 29 94 84 149 1.01e-12 62.8
MS.gene92775.t1 AT3G56800 44.755 143 79 0 22 164 4 146 1.45e-38 129
MS.gene92775.t1 AT3G56800 46.970 66 35 0 29 94 84 149 2.73e-12 61.6
MS.gene92775.t1 AT2G27030 44.755 143 79 0 22 164 4 146 1.45e-38 129
MS.gene92775.t1 AT2G27030 46.970 66 35 0 29 94 84 149 2.73e-12 61.6
MS.gene92775.t1 AT2G41110 44.755 143 79 0 22 164 4 146 1.45e-38 129
MS.gene92775.t1 AT2G41110 46.970 66 35 0 29 94 84 149 2.73e-12 61.6
MS.gene92775.t1 AT2G27030 44.755 143 79 0 22 164 4 146 1.99e-38 130
MS.gene92775.t1 AT2G27030 46.970 66 35 0 29 94 84 149 1.89e-12 62.8
MS.gene92775.t1 AT3G43810 44.755 143 79 0 22 164 4 146 2.46e-38 128
MS.gene92775.t1 AT3G43810 46.970 66 35 0 29 94 84 149 3.77e-12 61.2
MS.gene92775.t1 AT3G43810 45.070 142 78 0 23 164 5 146 5.71e-38 129
MS.gene92775.t1 AT3G43810 46.154 65 35 0 29 93 84 148 1.53e-11 60.8
MS.gene92775.t1 AT5G21274 44.056 143 80 0 22 164 4 146 8.15e-38 127
MS.gene92775.t1 AT5G21274 45.455 66 36 0 29 94 84 149 1.19e-11 59.7
MS.gene92775.t1 AT3G22930 42.857 147 84 0 22 168 27 173 8.79e-37 125
MS.gene92775.t1 AT5G37780 40.506 158 79 1 22 164 4 161 2.24e-35 121
MS.gene92775.t1 AT5G37780 48.485 66 34 0 29 94 99 164 1.33e-12 62.8
MS.gene92775.t1 AT2G41110 41.290 155 79 1 22 164 4 158 6.93e-35 120
MS.gene92775.t1 AT2G41110 46.970 66 35 0 29 94 96 161 3.39e-12 61.6
MS.gene92775.t1 AT4G14640 41.549 142 83 0 23 164 6 147 2.33e-34 118
MS.gene92775.t1 AT5G37780 37.870 169 79 1 22 164 4 172 1.77e-33 117
MS.gene92775.t1 AT5G37780 48.485 66 34 0 29 94 110 175 1.45e-12 62.8
MS.gene92775.t1 AT1G66410 41.830 153 79 1 22 164 4 156 2.73e-33 116
MS.gene92775.t1 AT1G66410 48.485 66 34 0 29 94 94 159 1.05e-12 62.8
MS.gene92775.t1 AT5G37780 42.623 122 70 0 43 164 12 133 9.32e-31 108
MS.gene92775.t1 AT5G37780 48.485 66 34 0 29 94 71 136 6.79e-13 62.8
MS.gene92775.t1 AT1G66410 42.727 110 63 0 55 164 1 110 3.27e-27 99.4
MS.gene92775.t1 AT1G66410 48.485 66 34 0 29 94 48 113 3.14e-13 63.2
MS.gene92775.t1 AT1G66410 42.727 110 63 0 55 164 1 110 3.27e-27 99.4
MS.gene92775.t1 AT1G66410 48.485 66 34 0 29 94 48 113 3.14e-13 63.2
MS.gene92775.t1 AT3G43810 42.727 110 63 0 55 164 1 110 1.03e-26 97.8
MS.gene92775.t1 AT3G43810 46.970 66 35 0 29 94 48 113 1.15e-12 61.6
MS.gene92775.t1 AT3G43810 42.727 110 63 0 55 164 1 110 1.03e-26 97.8
MS.gene92775.t1 AT3G43810 46.970 66 35 0 29 94 48 113 1.15e-12 61.6
MS.gene92775.t1 AT1G24620 35.185 162 99 2 9 170 21 176 1.77e-26 99.4
MS.gene92775.t1 AT4G14640 38.843 121 74 0 44 164 9 129 2.38e-26 97.4
MS.gene92775.t1 AT4G14640 50.794 63 31 0 29 91 67 129 3.38e-14 66.2
MS.gene92775.t1 AT3G22930 44.762 105 58 0 22 126 27 131 3.74e-26 97.1
MS.gene92775.t1 AT4G14640 42.718 103 59 0 23 125 6 108 1.39e-23 90.1
MS.gene92775.t1 AT5G23580 37.324 142 86 2 23 164 320 458 2.20e-22 93.2
MS.gene92775.t1 AT3G51920 34.014 147 97 0 23 169 5 151 5.51e-22 87.0
MS.gene92775.t1 AT2G41100 32.704 159 90 2 23 164 59 217 7.84e-22 89.7
MS.gene92775.t1 AT2G41100 33.654 104 66 1 10 113 136 236 1.58e-12 64.3
MS.gene92775.t1 AT2G41100 27.778 126 75 2 55 164 2 127 8.03e-11 59.7
MS.gene92775.t1 AT2G41100 32.704 159 90 2 23 164 59 217 7.84e-22 89.7
MS.gene92775.t1 AT2G41100 33.654 104 66 1 10 113 136 236 1.58e-12 64.3
MS.gene92775.t1 AT2G41100 27.778 126 75 2 55 164 2 127 8.03e-11 59.7
MS.gene92775.t1 AT2G41100 32.704 159 90 2 23 164 59 217 7.84e-22 89.7
MS.gene92775.t1 AT2G41100 33.654 104 66 1 10 113 136 236 1.58e-12 64.3
MS.gene92775.t1 AT2G41100 27.778 126 75 2 55 164 2 127 8.03e-11 59.7
MS.gene92775.t1 AT2G41090 33.333 144 93 1 21 164 3 143 1.10e-21 87.0
MS.gene92775.t1 AT2G41100 32.704 159 90 2 23 164 94 252 1.36e-21 89.7
MS.gene92775.t1 AT2G41100 31.013 158 93 2 23 164 5 162 1.21e-19 84.3
MS.gene92775.t1 AT2G41100 33.654 104 66 1 10 113 171 271 2.18e-12 64.3
MS.gene92775.t1 AT2G41100 32.704 159 90 2 23 164 94 252 1.36e-21 89.7
MS.gene92775.t1 AT2G41100 31.013 158 93 2 23 164 5 162 1.21e-19 84.3
MS.gene92775.t1 AT2G41100 33.654 104 66 1 10 113 171 271 2.18e-12 64.3
MS.gene92775.t1 AT2G43290 34.459 148 90 3 29 169 64 211 1.93e-21 87.0
MS.gene92775.t1 AT1G05990 35.664 143 89 2 30 169 5 147 3.05e-21 85.1
MS.gene92775.t1 AT1G12310 31.507 146 98 1 19 164 2 145 1.08e-20 83.6
MS.gene92775.t1 AT5G19360 35.915 142 89 2 23 164 366 505 1.12e-20 88.2
MS.gene92775.t1 AT1G18530 33.333 141 91 2 26 164 4 143 1.96e-20 83.2
MS.gene92775.t1 AT3G25600 32.609 138 91 1 29 164 11 148 3.21e-20 82.8
MS.gene92775.t1 AT5G12180 35.211 142 90 2 23 164 371 510 3.81e-20 87.0
MS.gene92775.t1 AT1G18210 33.824 136 86 1 29 164 22 153 4.59e-20 82.4
MS.gene92775.t1 AT1G18210 39.130 69 42 0 24 92 86 154 3.62e-11 58.9
MS.gene92775.t1 AT1G18210 33.824 136 86 1 29 164 22 153 4.59e-20 82.4
MS.gene92775.t1 AT1G18210 39.130 69 42 0 24 92 86 154 3.62e-11 58.9
MS.gene92775.t1 AT1G62820 31.034 145 98 1 20 164 3 145 7.37e-20 81.3
MS.gene92775.t1 AT2G36180 38.732 142 84 2 33 171 3 144 9.41e-20 80.9
MS.gene92775.t1 AT1G32250 30.065 153 101 1 23 169 9 161 1.13e-19 81.3
MS.gene92775.t1 AT4G09570 34.507 142 90 2 23 164 323 461 1.20e-19 85.5
MS.gene92775.t1 AT1G66400 33.099 142 93 1 29 168 14 155 2.72e-19 80.1
MS.gene92775.t1 AT1G35670 33.803 142 91 2 23 164 324 462 4.95e-19 83.6
MS.gene92775.t1 AT3G20410 36.429 140 83 3 29 166 395 530 1.23e-18 82.4
MS.gene92775.t1 AT3G20410 36.429 140 83 3 29 166 395 530 1.23e-18 82.4
MS.gene92775.t1 AT2G15680 31.361 169 107 2 5 166 18 184 1.26e-18 79.0
MS.gene92775.t1 AT1G73630 29.605 152 103 1 15 166 5 152 1.54e-18 78.2
MS.gene92775.t1 AT5G37770 32.867 143 92 1 30 168 17 159 1.80e-18 78.2
MS.gene92775.t1 AT5G37770 32.867 143 92 1 30 168 17 159 1.80e-18 78.2
MS.gene92775.t1 AT3G59440 30.556 144 97 2 30 171 51 193 2.74e-18 78.6
MS.gene92775.t1 AT1G76040 37.241 145 85 4 22 164 408 548 5.09e-18 80.9
MS.gene92775.t1 AT1G76040 37.241 145 85 4 22 164 170 310 5.50e-18 79.7
MS.gene92775.t1 AT1G76040 37.241 145 85 4 22 164 170 310 5.50e-18 79.7
MS.gene92775.t1 AT1G61950 33.987 153 95 3 21 171 395 543 7.96e-18 80.1
MS.gene92775.t1 AT2G17290 33.099 142 92 2 23 164 383 521 1.59e-17 79.3
MS.gene92775.t1 AT2G17290 33.099 142 92 2 23 164 383 521 1.59e-17 79.3
MS.gene92775.t1 AT4G21940 34.247 146 90 3 23 166 399 540 1.62e-17 79.3
MS.gene92775.t1 AT4G21940 34.247 146 90 3 23 166 399 540 1.83e-17 79.3
MS.gene92775.t1 AT4G04720 33.333 144 94 2 23 166 377 518 2.14e-17 79.0
MS.gene92775.t1 AT4G04720 33.333 144 94 2 23 166 377 518 2.14e-17 79.0
MS.gene92775.t1 AT1G50700 35.000 140 85 3 29 166 377 512 2.68e-17 78.6
MS.gene92775.t1 AT2G38910 31.293 147 98 2 23 169 432 575 2.91e-17 78.6
MS.gene92775.t1 AT4G38230 32.394 142 93 2 23 164 322 460 5.24e-17 77.8
MS.gene92775.t1 AT4G38230 32.394 142 93 2 23 164 322 460 5.24e-17 77.8
MS.gene92775.t1 AT4G38230 32.394 142 93 2 23 164 352 490 5.34e-17 77.8
MS.gene92775.t1 AT4G38230 32.394 142 93 2 23 164 178 316 6.82e-17 77.0
MS.gene92775.t1 AT4G35310 32.394 142 93 2 23 164 395 533 9.40e-17 77.0
MS.gene92775.t1 AT4G35310 32.394 142 93 2 23 164 395 533 9.40e-17 77.0
MS.gene92775.t1 AT4G04710 34.965 143 89 3 23 164 330 469 1.04e-16 77.0
MS.gene92775.t1 AT4G04710 34.965 143 89 3 23 164 316 455 1.40e-16 76.6
MS.gene92775.t1 AT4G04710 34.965 143 89 3 23 164 343 482 1.47e-16 76.6
MS.gene92775.t1 AT5G04870 31.690 142 94 2 23 164 448 586 2.56e-16 75.9
MS.gene92775.t1 AT4G12860 30.556 144 98 1 28 169 3 146 4.50e-16 71.6
MS.gene92775.t1 AT4G23650 30.769 143 97 2 22 164 375 515 9.06e-16 74.3
MS.gene92775.t1 AT3G10660 30.986 142 95 2 23 164 484 622 9.32e-16 74.3
MS.gene92775.t1 AT3G10660 30.986 142 95 2 23 164 484 622 9.32e-16 74.3
MS.gene92775.t1 AT4G03290 30.714 140 92 2 30 164 5 144 1.40e-15 70.5
MS.gene92775.t1 AT3G07490 30.986 142 96 1 30 169 5 146 1.47e-15 70.1
MS.gene92775.t1 AT5G17470 36.232 138 86 2 31 166 3 140 1.63e-15 70.1
MS.gene92775.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene92775.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene92775.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene92775.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene92775.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene92775.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene92775.t1 AT4G04710 35.172 145 88 4 23 164 343 484 1.81e-15 73.6
MS.gene92775.t1 AT4G04700 32.414 145 96 2 22 166 328 470 2.69e-15 72.8
MS.gene92775.t1 AT5G42380 28.676 136 96 1 30 164 49 184 8.08e-15 68.9
MS.gene92775.t1 AT4G04695 31.034 145 98 2 22 166 328 470 1.97e-14 70.5
MS.gene92775.t1 AT3G03000 27.027 148 107 1 23 169 13 160 1.15e-13 65.5
MS.gene92775.t1 AT3G50770 29.762 168 111 3 2 164 38 203 1.60e-13 65.9
MS.gene92775.t1 AT3G57530 29.412 153 99 6 22 170 360 507 3.65e-13 66.6
MS.gene92775.t1 AT3G51850 30.201 149 102 2 23 170 352 499 3.74e-13 66.6
MS.gene92775.t1 AT1G74740 28.477 151 104 4 22 170 356 504 3.95e-13 66.6
MS.gene92775.t1 AT1G50700 29.518 166 85 4 29 166 377 538 4.70e-13 66.6
MS.gene92775.t1 AT2G41100 29.921 127 72 2 55 164 1 127 4.78e-13 64.7
MS.gene92775.t1 AT2G41100 33.654 104 66 1 10 113 46 146 6.51e-13 64.3
MS.gene92775.t1 AT3G10190 32.609 138 90 3 30 165 70 206 4.80e-13 64.7
MS.gene92775.t1 AT5G12480 27.815 151 106 3 22 170 262 411 5.33e-13 66.2
MS.gene92775.t1 AT5G12480 27.815 151 106 3 22 170 356 505 5.66e-13 66.2
MS.gene92775.t1 AT2G41100 36.264 91 55 1 23 113 5 92 5.74e-13 63.2
MS.gene92775.t1 AT2G41410 31.159 138 92 3 30 164 70 207 4.26e-12 62.4
MS.gene92775.t1 AT4G04740 31.298 131 84 3 23 151 366 492 4.61e-12 63.5
MS.gene92775.t1 AT3G03400 31.452 124 83 1 31 152 6 129 4.79e-12 60.5
MS.gene92775.t1 AT1G76640 27.083 144 103 1 23 164 15 158 5.56e-12 60.8
MS.gene92775.t1 AT2G41860 28.289 152 103 4 22 170 351 499 9.82e-12 62.8
MS.gene92775.t1 AT2G41860 28.289 152 103 4 22 170 351 499 1.10e-11 62.4
MS.gene92775.t1 AT1G18890 29.605 152 101 5 22 170 360 508 3.06e-11 61.2

Find 32 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTGTTGTTGAATCTTC+TGG 0.148468 7.4:+30924846 None:intergenic
AGTGTCTCTTTCTCCTATTT+TGG 0.237506 7.4:+30923966 None:intergenic
CAGTCATCTTCTATACTTAG+AGG 0.308294 7.4:-30924874 MS.gene92775:CDS
TTTGTGGAAACTTACTATTT+TGG 0.351393 7.4:+30923713 None:intergenic
TCTTATCTTTGTAGGGCCCT+TGG 0.375272 7.4:-30924539 MS.gene92775:intron
CACATGATGACGGCCAAAAT+AGG 0.383388 7.4:-30923979 MS.gene92775:CDS
ATCATCATGATGAACTCCTC+TGG 0.458576 7.4:+30921680 None:intergenic
AAATGATAGCAGATGTCGAC+AGG 0.463318 7.4:-30924038 MS.gene92775:CDS
ATCATGATGATGAACACAAC+AGG 0.494636 7.4:-30921668 MS.gene92775:CDS
TTATTCGACACTGATGGCTC+AGG 0.496240 7.4:-30924766 MS.gene92775:intron
TGTATTGTAGGGTAAGATAT+CGG 0.507847 7.4:-30923818 MS.gene92775:intron
CATAGCAACATTAAGCTCCT+TGG 0.513823 7.4:+30924639 None:intergenic
TTTAGGTACTATTGATGCCA+AGG 0.521565 7.4:-30924656 MS.gene92775:intron
TGATAGAGAGATTCAGGAGA+TGG 0.522125 7.4:-30923749 MS.gene92775:CDS
TTTGAATTATTCGACACTGA+TGG 0.531996 7.4:-30924772 MS.gene92775:CDS
CTTCAGTCATCTCAAATCCA+AGG 0.540688 7.4:+30924522 None:intergenic
TAGCAGATGTCGACAGGGAT+GGG 0.548013 7.4:-30924032 MS.gene92775:CDS
AAGCGGATTGCAAAAGAGCT+AGG 0.569005 7.4:-30923784 MS.gene92775:CDS
AGGAGAAAGAGACACTAAAG+AGG 0.570607 7.4:-30923959 MS.gene92775:CDS
ATAGCAGATGTCGACAGGGA+TGG 0.573080 7.4:-30924033 MS.gene92775:CDS
GATGTCGACAGGGATGGGAG+TGG 0.578755 7.4:-30924027 MS.gene92775:CDS
TTCAGTCATCTCAAATCCAA+GGG 0.589829 7.4:+30924523 None:intergenic
TGATCGAGAGGTTGATCCAG+AGG 0.590124 7.4:-30921696 MS.gene92775:CDS
TGGATTTGAGATGACTGAAG+AGG 0.608260 7.4:-30924519 MS.gene92775:intron
AGGAGCTTAATGTTGCTATG+AGG 0.614526 7.4:-30924636 MS.gene92775:intron
GTAGGGTAAGATATCGGCAT+CGG 0.618796 7.4:-30923812 MS.gene92775:intron
AGATTCAACAACAAACAAAG+AGG 0.630713 7.4:-30924841 MS.gene92775:CDS
ATAATATGCAGATGATCGAG+AGG 0.639575 7.4:-30921708 MS.gene92775:intron
GATGTAGATATGACTAGTGA+CGG 0.656087 7.4:+30921642 None:intergenic
TGAATTTGAGCACATGATGA+CGG 0.665935 7.4:-30923989 MS.gene92775:CDS
TATCGGCATCGGATATCAAG+CGG 0.676928 7.4:-30923801 MS.gene92775:CDS
AATGATAGCAGATGTCGACA+GGG 0.695960 7.4:-30924037 MS.gene92775:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCTTCTTTATTAATT+AGG - chr7.4:30923752-30923771 MS.gene92775:CDS 10.0%
!! TTAATCTTCTTTATTAATTA+GGG - chr7.4:30923753-30923772 MS.gene92775:CDS 10.0%
!!! AAAATGTTTTTCATAATAAT+TGG - chr7.4:30922094-30922113 MS.gene92775:intron 10.0%
!!! AAACTAATATATTTTAACAA+TGG + chr7.4:30923593-30923612 None:intergenic 10.0%
!!! AAATGTTTTTCATAATAATT+GGG - chr7.4:30922095-30922114 MS.gene92775:intron 10.0%
!!! ATTTTTCAATAAATGTTTTA+TGG + chr7.4:30924774-30924793 None:intergenic 10.0%
!!! TTTTTCAATAAATGTTTTAT+GGG + chr7.4:30924773-30924792 None:intergenic 10.0%
!! AATAGATTAAAGTATAGAAT+AGG - chr7.4:30924352-30924371 MS.gene92775:intron 15.0%
!! ATAAGAAATAATAGTATCAT+TGG - chr7.4:30923116-30923135 MS.gene92775:intron 15.0%
!! ATATATATATATAATCCCTA+AGG - chr7.4:30923623-30923642 MS.gene92775:intron 15.0%
!! TAAAAAGTAAACATAATGAT+TGG - chr7.4:30923332-30923351 MS.gene92775:intron 15.0%
!! TAATCTTCTTTATTAATTAG+GGG - chr7.4:30923754-30923773 MS.gene92775:CDS 15.0%
!! TTTACTATATCATATTATGT+GGG + chr7.4:30923819-30923838 None:intergenic 15.0%
!!! CTTTTAACTTTGTTTTTTAT+GGG + chr7.4:30924315-30924334 None:intergenic 15.0%
!!! TACTTTGTTTAATGATTTTT+AGG - chr7.4:30922012-30922031 MS.gene92775:intron 15.0%
!!! TTTTAACTTTGTTTTTTATG+GGG + chr7.4:30924314-30924333 None:intergenic 15.0%
!!! TTTTACTATATCATATTATG+TGG + chr7.4:30923820-30923839 None:intergenic 15.0%
!! AAATAATATCTCACAAACAT+GGG + chr7.4:30924938-30924957 None:intergenic 20.0%
!! ATCTTATTCTTATCTTTGTA+GGG - chr7.4:30922139-30922158 MS.gene92775:intron 20.0%
!! CCATAAAAAACAAAGTTAAA+AGG - chr7.4:30924313-30924332 MS.gene92775:intron 20.0%
!! CTTATACTAATTTAGAGATA+GGG - chr7.4:30922480-30922499 MS.gene92775:intron 20.0%
!! GGTAATTAATGTTTATGTTT+GGG - chr7.4:30922240-30922259 MS.gene92775:intron 20.0%
!! GGTTTCATAAAAATTCTTAA+GGG - chr7.4:30924835-30924854 MS.gene92775:CDS 20.0%
!! GTTTCATAAAAATTCTTAAG+GGG - chr7.4:30924836-30924855 MS.gene92775:CDS 20.0%
!! TAAATAATATCTCACAAACA+TGG + chr7.4:30924939-30924958 None:intergenic 20.0%
!! TCTTATACTAATTTAGAGAT+AGG - chr7.4:30922479-30922498 MS.gene92775:intron 20.0%
!! TGGTTTCATAAAAATTCTTA+AGG - chr7.4:30924834-30924853 MS.gene92775:CDS 20.0%
!! TTACTATATCATATTATGTG+GGG + chr7.4:30923818-30923837 None:intergenic 20.0%
!!! ATTTTAATTAGAGTACCTTA+AGG - chr7.4:30923421-30923440 MS.gene92775:intron 20.0%
!!! CATTAAACAAAGTATTAGTA+TGG + chr7.4:30922006-30922025 None:intergenic 20.0%
!!! CCTTTTAACTTTGTTTTTTA+TGG + chr7.4:30924316-30924335 None:intergenic 20.0%
!!! TAAAAATTTTACATCTCACA+TGG - chr7.4:30923023-30923042 MS.gene92775:intron 20.0%
!!! TATGATTCATTTTTATTGTC+AGG + chr7.4:30923307-30923326 None:intergenic 20.0%
!!! TTTTGTCTTGATCAATAATA+TGG + chr7.4:30922768-30922787 None:intergenic 20.0%
! AAATGCTACAACAATAAAAG+AGG + chr7.4:30922447-30922466 None:intergenic 25.0%
! ACACAAAAATTATAAGTTCC+AGG + chr7.4:30924393-30924412 None:intergenic 25.0%
! AGATTATGTACAATATTGTC+AGG - chr7.4:30922541-30922560 MS.gene92775:intron 25.0%
! AGTATTAGTATGGTATAAAG+AGG + chr7.4:30921996-30922015 None:intergenic 25.0%
! ATCAAGGTAGAATAAACAAT+AGG - chr7.4:30924459-30924478 MS.gene92775:intron 25.0%
! CAATATCTCAACAACTTAAA+AGG + chr7.4:30923678-30923697 None:intergenic 25.0%
! CATCTTATTCTTATCTTTGT+AGG - chr7.4:30922138-30922157 MS.gene92775:intron 25.0%
! CGGTAATTAATGTTTATGTT+TGG - chr7.4:30922239-30922258 MS.gene92775:intron 25.0%
! CGTATTTGTATATCATTCTA+CGG - chr7.4:30923046-30923065 MS.gene92775:intron 25.0%
! TAAACTTATCATAGAAAAGG+TGG + chr7.4:30924082-30924101 None:intergenic 25.0%
! TCAAGGTAGAATAAACAATA+GGG - chr7.4:30924460-30924479 MS.gene92775:intron 25.0%
! TGATATTTACACAAAAGACT+AGG + chr7.4:30922390-30922409 None:intergenic 25.0%
! TTATTAATTAGGGGTTAACT+AGG - chr7.4:30923763-30923782 MS.gene92775:CDS 25.0%
!! ACATATTTTCAGTCTTAAGA+TGG - chr7.4:30923839-30923858 MS.gene92775:intron 25.0%
!! TTTGTCAGTTTGAAACTAAA+CGG - chr7.4:30924800-30924819 MS.gene92775:CDS 25.0%
!! TTTGTGGAAACTTACTATTT+TGG + chr7.4:30922975-30922994 None:intergenic 25.0%
!! TTTTATGGGATATACAATTC+AGG + chr7.4:30924759-30924778 None:intergenic 25.0%
!!! CAAGAATATTTTTGACTACA+TGG + chr7.4:30921969-30921988 None:intergenic 25.0%
!!! TGATTCTCATTGTATTTTTG+TGG - chr7.4:30922840-30922859 MS.gene92775:intron 25.0%
AAAAGACAGTTCTTGATCAA+GGG + chr7.4:30921768-30921787 None:intergenic 30.0%
ACATAATTTGAGCTATAGAG+AGG - chr7.4:30923365-30923384 MS.gene92775:intron 30.0%
AGATTCAACAACAAACAAAG+AGG - chr7.4:30921844-30921863 MS.gene92775:intron 30.0%
ATTATAAGTTCCAGGTGATA+TGG + chr7.4:30924385-30924404 None:intergenic 30.0%
ATTGTTGTAGCATTTAGCTA+TGG - chr7.4:30922452-30922471 MS.gene92775:intron 30.0%
ATTTAGAGATAGGGATTCAA+TGG - chr7.4:30922489-30922508 MS.gene92775:intron 30.0%
CATAATTTGAGCTATAGAGA+GGG - chr7.4:30923366-30923385 MS.gene92775:intron 30.0%
CGCTAAACTTATCATAGAAA+AGG + chr7.4:30924085-30924104 None:intergenic 30.0%
CTAAAAAGTTAGAACTAGCA+AGG + chr7.4:30923003-30923022 None:intergenic 30.0%
CTGACAATGTGTTTATAAGT+GGG - chr7.4:30924007-30924026 MS.gene92775:CDS 30.0%
GAATGTACATTTATATGGGT+AGG + chr7.4:30923794-30923813 None:intergenic 30.0%
GGGAGAATGTACATTTATAT+GGG + chr7.4:30923798-30923817 None:intergenic 30.0%
TACCTTAAGGTAATATTTGC+TGG - chr7.4:30923434-30923453 MS.gene92775:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG - chr7.4:30924008-30924027 MS.gene92775:CDS 30.0%
TGTATTGTAGGGTAAGATAT+CGG - chr7.4:30922867-30922886 MS.gene92775:intron 30.0%
TGTTCCTAACAACTTACTTT+CGG + chr7.4:30923483-30923502 None:intergenic 30.0%
TTATCATAGAAAAGGTGGTT+GGG + chr7.4:30924077-30924096 None:intergenic 30.0%
TTCAACACACAAAAAGAGTA+TGG + chr7.4:30924884-30924903 None:intergenic 30.0%
TTTGAATTATTCGACACTGA+TGG - chr7.4:30921913-30921932 MS.gene92775:intron 30.0%
! AACTTACTTTCGGACATTTT+GGG + chr7.4:30923473-30923492 None:intergenic 30.0%
! AGACTAGGAATTATTTTCCT+TGG + chr7.4:30922375-30922394 None:intergenic 30.0%
! AGGTATTGTTGTTATTCACA+AGG - chr7.4:30922069-30922088 MS.gene92775:intron 30.0%
! TTGTCAGTTTGAAACTAAAC+GGG - chr7.4:30924801-30924820 MS.gene92775:CDS 30.0%
! TTTTACTGATAGAGAGATTC+AGG - chr7.4:30922930-30922949 MS.gene92775:intron 30.0%
! TTTTAGTACTCACGTAGTTT+CGG - chr7.4:30923196-30923215 MS.gene92775:intron 30.0%
!! AATTTGCTGAAATGACACAA+TGG + chr7.4:30922623-30922642 None:intergenic 30.0%
!! ATAAACAATAGGGTGCTATT+TGG - chr7.4:30924470-30924489 MS.gene92775:intron 30.0%
!! TTGTTTGTTGTTGAATCTTC+TGG + chr7.4:30921842-30921861 None:intergenic 30.0%
!!! ATTTTTTCTTGCGTTAGGAT+TGG - chr7.4:30924903-30924922 MS.gene92775:intron 30.0%
!!! GTTGAATTTTTTCTTGCGTT+AGG - chr7.4:30924898-30924917 MS.gene92775:intron 30.0%
!!! TATAGGCATTTTGGATTAGT+AGG - chr7.4:30924560-30924579 MS.gene92775:intron 30.0%
AACTAGCAAGGATATGTTTG+TGG + chr7.4:30922991-30923010 None:intergenic 35.0%
ACAACATAATATGCAACGAG+TGG + chr7.4:30922217-30922236 None:intergenic 35.0%
ACATAACAAGTAGTACAAGC+AGG + chr7.4:30924699-30924718 None:intergenic 35.0%
ATAATATGCAGATGATCGAG+AGG - chr7.4:30924977-30924996 MS.gene92775:intron 35.0%
ATGTCCGAAAGTAAGTTGTT+AGG - chr7.4:30923476-30923495 MS.gene92775:intron 35.0%
CAAAAGACAGTTCTTGATCA+AGG + chr7.4:30921769-30921788 None:intergenic 35.0%
CAACGAGTGGTTATAAAAAG+GGG + chr7.4:30922204-30922223 None:intergenic 35.0%
CACCAGCAAATATTACCTTA+AGG + chr7.4:30923439-30923458 None:intergenic 35.0%
CAGGAACCTATTGTAATCAT+AGG + chr7.4:30924740-30924759 None:intergenic 35.0%
CAGTCATCTTCTATACTTAG+AGG - chr7.4:30921811-30921830 MS.gene92775:intron 35.0%
CATAACAAGTAGTACAAGCA+GGG + chr7.4:30924698-30924717 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG + chr7.4:30924009-30924028 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG - chr7.4:30924006-30924025 MS.gene92775:CDS 35.0%
CTGGTTCCTATGATTACAAT+AGG - chr7.4:30924731-30924750 MS.gene92775:intron 35.0%
CTTATCATAGAAAAGGTGGT+TGG + chr7.4:30924078-30924097 None:intergenic 35.0%
GACAATGTGTTTATAAGTGG+GGG - chr7.4:30924009-30924028 MS.gene92775:CDS 35.0%
GACATTCATGTAAACATCGA+AGG - chr7.4:30923257-30923276 MS.gene92775:intron 35.0%
GACTACATGGTTATTGTTGA+TGG + chr7.4:30921956-30921975 None:intergenic 35.0%
GAGTTACTACATCAACCTTA+GGG + chr7.4:30923641-30923660 None:intergenic 35.0%
GCAACGAGTGGTTATAAAAA+GGG + chr7.4:30922205-30922224 None:intergenic 35.0%
GGGGAGAATGTACATTTATA+TGG + chr7.4:30923799-30923818 None:intergenic 35.0%
GTCAGTTACAATGGCAATTT+GGG - chr7.4:30924503-30924522 MS.gene92775:intron 35.0%
TAGAGAGGGAATCTGATATA+TGG - chr7.4:30923380-30923399 MS.gene92775:intron 35.0%
TGAATTTGAGCACATGATGA+CGG - chr7.4:30922696-30922715 MS.gene92775:intron 35.0%
TGAGTTACTACATCAACCTT+AGG + chr7.4:30923642-30923661 None:intergenic 35.0%
TGATATATGGTTGCATTGCA+TGG - chr7.4:30923393-30923412 MS.gene92775:intron 35.0%
TGCAACGAGTGGTTATAAAA+AGG + chr7.4:30922206-30922225 None:intergenic 35.0%
TTCAGTCATCTCAAATCCAA+GGG + chr7.4:30922165-30922184 None:intergenic 35.0%
TTTAGGTACTATTGATGCCA+AGG - chr7.4:30922029-30922048 MS.gene92775:intron 35.0%
TTTGTGGTCACTGTATTGTA+GGG - chr7.4:30922856-30922875 MS.gene92775:intron 35.0%
! AGTGTCTCTTTCTCCTATTT+TGG + chr7.4:30922722-30922741 None:intergenic 35.0%
! ATCATGATGATGAACACAAC+AGG - chr7.4:30925017-30925036 MS.gene92775:intron 35.0%
! ATTGAAAGTATAGTGCGCAT+TGG - chr7.4:30923167-30923186 MS.gene92775:intron 35.0%
! CAACTTACTTTCGGACATTT+TGG + chr7.4:30923474-30923493 None:intergenic 35.0%
! CTTAAGGTAATATTTGCTGG+TGG - chr7.4:30923437-30923456 MS.gene92775:intron 35.0%
! GCACATTTGTATAGGCATTT+TGG - chr7.4:30924551-30924570 MS.gene92775:intron 35.0%
! GGAATTATTTTCCTTGGCAA+CGG + chr7.4:30922369-30922388 None:intergenic 35.0%
! TACTACTGTAACTTGCAAGA+TGG + chr7.4:30923567-30923586 None:intergenic 35.0%
! TGTCAGTTTGAAACTAAACG+GGG - chr7.4:30924802-30924821 MS.gene92775:CDS 35.0%
! TTGAAAGTATAGTGCGCATT+GGG - chr7.4:30923168-30923187 MS.gene92775:intron 35.0%
! TTTTGTGGTCACTGTATTGT+AGG - chr7.4:30922855-30922874 MS.gene92775:intron 35.0%
!! AAAAGAGGTATCACAGAGAA+AGG + chr7.4:30922432-30922451 None:intergenic 35.0%
!! AAAGAGGTATCACAGAGAAA+GGG + chr7.4:30922431-30922450 None:intergenic 35.0%
AAATGATAGCAGATGTCGAC+AGG - chr7.4:30922647-30922666 MS.gene92775:intron 40.0%
AATGATAGCAGATGTCGACA+GGG - chr7.4:30922648-30922667 MS.gene92775:intron 40.0%
AATGGCAATTTGGGAGTTAG+AGG - chr7.4:30924512-30924531 MS.gene92775:intron 40.0%
AGGAGAAAGAGACACTAAAG+AGG - chr7.4:30922726-30922745 MS.gene92775:intron 40.0%
AGGAGCTTAATGTTGCTATG+AGG - chr7.4:30922049-30922068 MS.gene92775:intron 40.0%
ATAGGAACCAGAAAAACCAC+AGG + chr7.4:30924722-30924741 None:intergenic 40.0%
ATATCATTCTACGGTGAGCT+GGG - chr7.4:30923055-30923074 MS.gene92775:intron 40.0%
ATCATCATGATGAACTCCTC+TGG + chr7.4:30925008-30925027 None:intergenic 40.0%
CAGGTTCTGCACATTTGTAT+AGG - chr7.4:30924543-30924562 MS.gene92775:intron 40.0%
CATAGCAACATTAAGCTCCT+TGG + chr7.4:30922049-30922068 None:intergenic 40.0%
CCTGCAATGGAGAGAAAATA+AGG + chr7.4:30924637-30924656 None:intergenic 40.0%
CGTTGCATATTATGTTGTCG+CGG - chr7.4:30922219-30922238 MS.gene92775:intron 40.0%
CTAAACTAACCCACCCAAAT+TGG + chr7.4:30924199-30924218 None:intergenic 40.0%
CTTCAGTCATCTCAAATCCA+AGG + chr7.4:30922166-30922185 None:intergenic 40.0%
GAACACTGTTATTCCTGCAA+TGG + chr7.4:30924650-30924669 None:intergenic 40.0%
GAAGGATATGTTCTGCCATA+TGG - chr7.4:30924250-30924269 MS.gene92775:intron 40.0%
GGAGTTAGAGGTTAATTAGC+AGG - chr7.4:30924524-30924543 MS.gene92775:CDS 40.0%
GGTCAGTTACAATGGCAATT+TGG - chr7.4:30924502-30924521 MS.gene92775:intron 40.0%
GTATCACAGAGAAAGGGAAT+TGG + chr7.4:30922425-30922444 None:intergenic 40.0%
TATATCATTCTACGGTGAGC+TGG - chr7.4:30923054-30923073 MS.gene92775:intron 40.0%
TATGTTCTGCCATATGGTAG+CGG - chr7.4:30924256-30924275 MS.gene92775:intron 40.0%
TGATAGAGAGATTCAGGAGA+TGG - chr7.4:30922936-30922955 MS.gene92775:intron 40.0%
TGCGATTTAGCTGGAAATCA+AGG - chr7.4:30924443-30924462 MS.gene92775:intron 40.0%
TGGTTATAAAAAGGGGCAGA+GGG + chr7.4:30922197-30922216 None:intergenic 40.0%
TTAGCGTTCATAACCCACTT+CGG - chr7.4:30924099-30924118 MS.gene92775:intron 40.0%
! CTCTTAGTTGTGACTTGTGA+GGG - chr7.4:30924595-30924614 MS.gene92775:intron 40.0%
! GGTGGAGATATGTGTGTTTT+AGG - chr7.4:30923076-30923095 MS.gene92775:intron 40.0%
! GTCAGTTTGAAACTAAACGG+GGG - chr7.4:30924803-30924822 MS.gene92775:CDS 40.0%
! GTTATGTCCTGTGGTTTTTC+TGG - chr7.4:30924712-30924731 MS.gene92775:intron 40.0%
! TACAAGCAGGGAAAGTGTAT+GGG + chr7.4:30924686-30924705 None:intergenic 40.0%
! TCAGTTTGAAACTAAACGGG+GGG - chr7.4:30924804-30924823 MS.gene92775:CDS 40.0%
! TCTCTTAGTTGTGACTTGTG+AGG - chr7.4:30924594-30924613 MS.gene92775:intron 40.0%
! TCTTAGTTGTGACTTGTGAG+GGG - chr7.4:30924596-30924615 MS.gene92775:intron 40.0%
! TGGATTTGAGATGACTGAAG+AGG - chr7.4:30922166-30922185 MS.gene92775:intron 40.0%
!! ACAATAGGGTGCTATTTGGT+CGG - chr7.4:30924474-30924493 MS.gene92775:intron 40.0%
!! GTACTACTTGTTATGTCCTG+TGG - chr7.4:30924703-30924722 MS.gene92775:intron 40.0%
!!! CCTTATTTTCTCTCCATTGC+AGG - chr7.4:30924634-30924653 MS.gene92775:intron 40.0%
AAGTTTAGCGTTCCTGCTGA+AGG - chr7.4:30924232-30924251 MS.gene92775:intron 45.0%
ACTTGGACATGCGATTTAGC+TGG - chr7.4:30924434-30924453 MS.gene92775:intron 45.0%
ATGTTCTGCCATATGGTAGC+GGG - chr7.4:30924257-30924276 MS.gene92775:intron 45.0%
CGGTCAAAGGTCAGTTACAA+TGG - chr7.4:30924494-30924513 MS.gene92775:intron 45.0%
CTAACACAACCCCACAAAAG+CGG + chr7.4:30924053-30924072 None:intergenic 45.0%
GAATCGAACATGTGACCTAG+AGG + chr7.4:30924167-30924186 None:intergenic 45.0%
GGTTATAAAAAGGGGCAGAG+GGG + chr7.4:30922196-30922215 None:intergenic 45.0%
GGTTCGTGGACATAAATGGT+GGG + chr7.4:30923925-30923944 None:intergenic 45.0%
GTACAATACACACGATGCGT+AGG - chr7.4:30924411-30924430 MS.gene92775:intron 45.0%
GTAGGGTAAGATATCGGCAT+CGG - chr7.4:30922873-30922892 MS.gene92775:intron 45.0%
GTGGTTATAAAAAGGGGCAG+AGG + chr7.4:30922198-30922217 None:intergenic 45.0%
GTGTGTTAAGAGTCCCACTT+CGG - chr7.4:30923972-30923991 MS.gene92775:CDS 45.0%
GTTATAAAAAGGGGCAGAGG+GGG + chr7.4:30922195-30922214 None:intergenic 45.0%
TCTTATCTTTGTAGGGCCCT+TGG - chr7.4:30922146-30922165 MS.gene92775:intron 45.0%
TGGTTCGTGGACATAAATGG+TGG + chr7.4:30923926-30923945 None:intergenic 45.0%
TTAAGAGTCCCACTTCGGAT+AGG - chr7.4:30923977-30923996 MS.gene92775:CDS 45.0%
TTATAAAAAGGGGCAGAGGG+GGG + chr7.4:30922194-30922213 None:intergenic 45.0%
TTATTCGACACTGATGGCTC+AGG - chr7.4:30921919-30921938 MS.gene92775:intron 45.0%
! ACAAGCAGGGAAAGTGTATG+GGG + chr7.4:30924685-30924704 None:intergenic 45.0%
! CTGTAACTTGCAAGATGGAG+TGG + chr7.4:30923562-30923581 None:intergenic 45.0%
! GCTTGGTTCGTGGACATAAA+TGG + chr7.4:30923929-30923948 None:intergenic 45.0%
! GTACAAGCAGGGAAAGTGTA+TGG + chr7.4:30924687-30924706 None:intergenic 45.0%
! TATCGGCATCGGATATCAAG+CGG - chr7.4:30922884-30922903 MS.gene92775:intron 45.0%
! TTTTCCTTGGCAACGGTCAA+TGG + chr7.4:30922362-30922381 None:intergenic 45.0%
!! AAGCGGATTGCAAAAGAGCT+AGG - chr7.4:30922901-30922920 MS.gene92775:intron 45.0%
!! CACATGATGACGGCCAAAAT+AGG - chr7.4:30922706-30922725 MS.gene92775:intron 45.0%
ACGACCAGCACTATTAGGCT+TGG + chr7.4:30923946-30923965 None:intergenic 50.0%
ACTAAACGGGGGGTTTGCAT+TGG - chr7.4:30924814-30924833 MS.gene92775:CDS 50.0%
AGAGCCTCTCCAAGATCCAT+TGG - chr7.4:30923866-30923885 MS.gene92775:intron 50.0%
AGGTTCACAGCCATATCACC+TGG - chr7.4:30924372-30924391 MS.gene92775:intron 50.0%
ATAGCAGATGTCGACAGGGA+TGG - chr7.4:30922652-30922671 MS.gene92775:intron 50.0%
CGAACCAAGCCTAATAGTGC+TGG - chr7.4:30923939-30923958 MS.gene92775:CDS 50.0%
CGTTCATAACCCACTTCGGT+TGG - chr7.4:30924103-30924122 MS.gene92775:intron 50.0%
GAGCCTCTCCAAGATCCATT+GGG - chr7.4:30923867-30923886 MS.gene92775:intron 50.0%
GCTATCAGGTTTCCGCTATC+AGG - chr7.4:30923896-30923915 MS.gene92775:intron 50.0%
GGCAGAACATATCCTTCAGC+AGG + chr7.4:30924247-30924266 None:intergenic 50.0%
GTCACATGTTCGATTCTCCC+CGG - chr7.4:30924171-30924190 MS.gene92775:intron 50.0%
TAACCCACCCAAATTGGCAC+CGG + chr7.4:30924193-30924212 None:intergenic 50.0%
TACACACGATGCGTAGGACT+TGG - chr7.4:30924417-30924436 MS.gene92775:intron 50.0%
TAGCAGATGTCGACAGGGAT+GGG - chr7.4:30922653-30922672 MS.gene92775:intron 50.0%
TCATCCATTGACCGTTGCCA+AGG - chr7.4:30922355-30922374 MS.gene92775:intron 50.0%
TCGAACATGTGACCTAGAGG+AGG + chr7.4:30924164-30924183 None:intergenic 50.0%
! ATTCTCCCCGGTGCCAATTT+GGG - chr7.4:30924183-30924202 MS.gene92775:intron 50.0%
! CAAGCAGGGAAAGTGTATGG+GGG + chr7.4:30924684-30924703 None:intergenic 50.0%
! CGCTTTTGTGGGGTTGTGTT+AGG - chr7.4:30924051-30924070 MS.gene92775:CDS 50.0%
! GCACTATTAGGCTTGGTTCG+TGG + chr7.4:30923939-30923958 None:intergenic 50.0%
! TCGTGGACATAAATGGTGGG+TGG + chr7.4:30923922-30923941 None:intergenic 50.0%
! TGATCGAGAGGTTGATCCAG+AGG - chr7.4:30924989-30925008 MS.gene92775:intron 50.0%
! TGTGACTTGTGAGGGGAAAC+TGG - chr7.4:30924603-30924622 MS.gene92775:intron 50.0%
! TGTTCTGCCATATGGTAGCG+GGG - chr7.4:30924258-30924277 MS.gene92775:intron 50.0%
!! CCTAATAGTGCTGGTCGTGA+GGG - chr7.4:30923948-30923967 MS.gene92775:CDS 50.0%
!! CTAATAGTGCTGGTCGTGAG+GGG - chr7.4:30923949-30923968 MS.gene92775:CDS 50.0%
!! GATAGCGGAAACCTGATAGC+AGG + chr7.4:30923896-30923915 None:intergenic 50.0%
!! GGTGCTATTTGGTCGGTCAA+AGG - chr7.4:30924481-30924500 MS.gene92775:intron 50.0%
!! TAATAGTGCTGGTCGTGAGG+GGG - chr7.4:30923950-30923969 MS.gene92775:CDS 50.0%
!!! ACCTCACAAGCCGCTTTTGT+GGG - chr7.4:30924040-30924059 MS.gene92775:CDS 50.0%
AACCCACCCAAATTGGCACC+GGG + chr7.4:30924192-30924211 None:intergenic 55.0%
ACCATCAGGCCAACCGAAGT+GGG + chr7.4:30924115-30924134 None:intergenic 55.0%
AGCGGAAACCTGATAGCAGG+TGG + chr7.4:30923893-30923912 None:intergenic 55.0%
AGGCCATCACCTATCCGAAG+TGG + chr7.4:30923989-30924008 None:intergenic 55.0%
AGTCCTTCCCCGCTACCATA+TGG + chr7.4:30924268-30924287 None:intergenic 55.0%
CAAAAGCGGCTTGTGAGGTG+AGG + chr7.4:30924039-30924058 None:intergenic 55.0%
CCCTCACGACCAGCACTATT+AGG + chr7.4:30923951-30923970 None:intergenic 55.0%
CTAGAGTGTGCTCCTCCTCT+AGG - chr7.4:30924149-30924168 MS.gene92775:intron 55.0%
GATCCCAAGCCAACACCATC+AGG + chr7.4:30924129-30924148 None:intergenic 55.0%
GGCCATCACCTATCCGAAGT+GGG + chr7.4:30923988-30924007 None:intergenic 55.0%
GTCCCACTTCGGATAGGTGA+TGG - chr7.4:30923983-30924002 MS.gene92775:CDS 55.0%
TCATTCTACGGTGAGCTGGG+TGG - chr7.4:30923058-30923077 MS.gene92775:intron 55.0%
TGGCCCAATGGATCTTGGAG+AGG + chr7.4:30923873-30923892 None:intergenic 55.0%
! CTAGAGGAGGAGCACACTCT+AGG + chr7.4:30924151-30924170 None:intergenic 55.0%
! GATTCTCCCCGGTGCCAATT+TGG - chr7.4:30924182-30924201 MS.gene92775:intron 55.0%
!! AATGGTGGGTGGCCTGATAG+CGG + chr7.4:30923911-30923930 None:intergenic 55.0%
!! GCCTAATAGTGCTGGTCGTG+AGG - chr7.4:30923947-30923966 MS.gene92775:CDS 55.0%
!! TGGCCTGATGGTGTTGGCTT+GGG - chr7.4:30924123-30924142 MS.gene92775:intron 55.0%
!! TTCGGTTGGCCTGATGGTGT+TGG - chr7.4:30924117-30924136 MS.gene92775:intron 55.0%
!! TTGGCCTGATGGTGTTGGCT+TGG - chr7.4:30924122-30924141 MS.gene92775:intron 55.0%
!!! CACCTCACAAGCCGCTTTTG+TGG - chr7.4:30924039-30924058 MS.gene92775:CDS 55.0%
!!! CCTCACAAGCCGCTTTTGTG+GGG - chr7.4:30924041-30924060 MS.gene92775:CDS 55.0%
ACCCACCCAAATTGGCACCG+GGG + chr7.4:30924191-30924210 None:intergenic 60.0%
CACCATCAGGCCAACCGAAG+TGG + chr7.4:30924116-30924135 None:intergenic 60.0%
CCATTGGGCCACCTGCTATC+AGG - chr7.4:30923882-30923901 MS.gene92775:intron 60.0%
CCCCACAAAAGCGGCTTGTG+AGG + chr7.4:30924044-30924063 None:intergenic 60.0%
CCTGATAGCAGGTGGCCCAA+TGG + chr7.4:30923885-30923904 None:intergenic 60.0%
GATGTCGACAGGGATGGGAG+TGG - chr7.4:30922658-30922677 MS.gene92775:intron 60.0%
GCAGGTGGCCCAATGGATCT+TGG + chr7.4:30923878-30923897 None:intergenic 60.0%
! TCCCCGGTGCCAATTTGGGT+GGG - chr7.4:30924187-30924206 MS.gene92775:intron 60.0%
!! ACCCACTTCGGTTGGCCTGA+TGG - chr7.4:30924111-30924130 MS.gene92775:intron 60.0%
!! CTGCCATATGGTAGCGGGGA+AGG - chr7.4:30924262-30924281 MS.gene92775:intron 60.0%
! CTCCCCGGTGCCAATTTGGG+TGG - chr7.4:30924186-30924205 MS.gene92775:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 30921655 30925052 30921655 ID=MS.gene92775
chr7.4 mRNA 30921655 30925052 30921655 ID=MS.gene92775.t1;Parent=MS.gene92775
chr7.4 exon 30925050 30925052 30925050 ID=MS.gene92775.t1.exon1;Parent=MS.gene92775.t1
chr7.4 CDS 30925050 30925052 30925050 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
chr7.4 exon 30924767 30924893 30924767 ID=MS.gene92775.t1.exon2;Parent=MS.gene92775.t1
chr7.4 CDS 30924767 30924893 30924767 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
chr7.4 exon 30924637 30924673 30924637 ID=MS.gene92775.t1.exon3;Parent=MS.gene92775.t1
chr7.4 CDS 30924637 30924673 30924637 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
chr7.4 exon 30924520 30924547 30924520 ID=MS.gene92775.t1.exon4;Parent=MS.gene92775.t1
chr7.4 CDS 30924520 30924547 30924520 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
chr7.4 exon 30923918 30924070 30923918 ID=MS.gene92775.t1.exon5;Parent=MS.gene92775.t1
chr7.4 CDS 30923918 30924070 30923918 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
chr7.4 exon 30923728 30923830 30923728 ID=MS.gene92775.t1.exon6;Parent=MS.gene92775.t1
chr7.4 CDS 30923728 30923830 30923728 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
chr7.4 exon 30921655 30921719 30921655 ID=MS.gene92775.t1.exon7;Parent=MS.gene92775.t1
chr7.4 CDS 30921655 30921719 30921655 ID=cds.MS.gene92775.t1;Parent=MS.gene92775.t1
Gene Sequence

>MS.gene92775

ATGGTACGATCTCTCTGCTGTTCTTATTTTTCAATCAAACTAACAGATCATGATCTTTAGTCATTATTATTAATTTTGCAAATTTTATCTTTAAACTATTAGAGTAGATTCCCTTGATCAAGAACTGTCTTTTGATTTGATGTGCAATTTTGTTATCAGTCATCTTCTATACTTAGAGGAGATTCCAGAAGATTCAACAACAAACAAAGAGGAAAACATCATTTGACGCAACAGAAGAGACAAGAGATTAAAGAAGCTTTTGAATTATTCGACACTGATGGCTCAGGTTTACACTTTACCATCAACAATAACCATGTAGTCAAAAATATTCTTGATCTCCTCTTTATACCATACTAATACTTTGTTTAATGATTTTTAGGTACTATTGATGCCAAGGAGCTTAATGTTGCTATGAGGTATTGTTGTTATTCACAAGGTTAAAATGTTTTTCATAATAATTGGGCATGTTGTTTTCATAACATACATCTTATTCTTATCTTTGTAGGGCCCTTGGATTTGAGATGACTGAAGAGGTACCCCCCTCTGCCCCTTTTTATAACCACTCGTTGCATATTATGTTGTCGCGGTAATTAATGTTTATGTTTGGGAAAGTAACAAGTACATCTTGTTATTTGATAATATCTAAGTACTTTCATTCAATTTTCATACAATTGAGCATAGTTTACAGATTTTAATTATTTCATCCATTGACCGTTGCCAAGGAAAATAATTCCTAGTCTTTTGTGTAAATATCACGAGCAATGAAGCCAATTCCCTTTCTCTGTGATACCTCTTTTATTGTTGTAGCATTTAGCTATGGTTGTTCTTATACTAATTTAGAGATAGGGATTCAATGGCTAATGAAATTTGATTGTAGAATAGTAATAGATTATGTACAATATTGTCAGGATTTTGTGATGTTATTCTTTGTTAAAGTTTTATATGCATTCTCTCTAATAGATCATCCATTGTGTCATTTCAGCAAATTGAGCAAATGATAGCAGATGTCGACAGGGATGGGAGTGGAGCAATCGACTATGATGAATTTGAGCACATGATGACGGCCAAAATAGGAGAAAGAGACACTAAAGAGGAGCTCATGAAAGCTTTCCATATTATTGATCAAGACAAAAATGTGAATATCAGATATCTTCTCTACTATACATCATTAGTATTGCTTCTTATTGATTCTCATTGTATTTTTGTGGTCACTGTATTGTAGGGTAAGATATCGGCATCGGATATCAAGCGGATTGCAAAAGAGCTAGGTCAAAATTTTACTGATAGAGAGATTCAGGAGATGGTTGATGAAGCAGACCAAAATAGTAAGTTTCCACAAACATATCCTTGCTAGTTCTAACTTTTTAGTAAAAATTTTACATCTCACATGGCGTATTTGTATATCATTCTACGGTGAGCTGGGTGGAGATATGTGTGTTTTAGGTTATGCTAACATAGTGTATAAGAAATAATAGTATCATTGGTTTGAACTTTAAATCTGTGATTTTCTACATTGAAAGTATAGTGCGCATTGGGTCATGTTTTAGTACTCACGTAGTTTCGGACACTTATAATTTTGACATAAGAAAAAATAAATGATAAGACATTCATGTAAACATCGAAGGTATTACAACTAATGATAGTTTAATCCTGACAATAAAAATGAATCATATTAGATAAAAAGTAAACATAATGATTGGAATACTATGAACATAATTTGAGCTATAGAGAGGGAATCTGATATATGGTTGCATTGCATGGAGTATATTTTAATTAGAGTACCTTAAGGTAATATTTGCTGGTGGACTTAGATCTCCCAAAATGTCCGAAAGTAAGTTGTTAGGAACATTATTGCAATGATAAAACAAACACAGAATTTGCTTTTGAAGCAAAATAATCAAAATCCACTCCATCTTGCAAGTTACAGTAGTAAGTCCATTGTTAAAATATATTAGTTTGAAGCAAAAAATATATATATATAATCCCTAAGGTTGATGTAGTAACTCATATTCAGAAGTTGCCTTTTAAGTTGTTGAGATATTGAAAAGTTGTGACTGTATAGTTTTAACTTCACTATTTATTGTATTGATTGTATTGATTAATCTTCTTTATTAATTAGGGGTTAACTAGGAGACTCCTACCCATATAAATGTACATTCTCCCCACATAATATGATATAGTAAAACATATTTTCAGTCTTAAGATGGTATCAGAGCCTCTCCAAGATCCATTGGGCCACCTGCTATCAGGTTTCCGCTATCAGGCCACCCACCATTTATGTCCACGAACCAAGCCTAATAGTGCTGGTCGTGAGGGGGTGTGTTAAGAGTCCCACTTCGGATAGGTGATGGCCTGACAATGTGTTTATAAGTGGGGGCAATCCTCACCTCACAAGCCGCTTTTGTGGGGTTGTGTTAGGCCCAACCACCTTTTCTATGATAAGTTTAGCGTTCATAACCCACTTCGGTTGGCCTGATGGTGTTGGCTTGGGATCCTAGAGTGTGCTCCTCCTCTAGGTCACATGTTCGATTCTCCCCGGTGCCAATTTGGGTGGGTTAGTTTAGTTTATAAAAAAAAAAGTTTAGCGTTCCTGCTGAAGGATATGTTCTGCCATATGGTAGCGGGGAAGGACTCTGCAGTAAATTGTTCACTACTTCCCCATAAAAAACAAAGTTAAAAGGCTGCAAACAGAGCTATAATAGATTAAAGTATAGAATAGGTTCACAGCCATATCACCTGGAACTTATAATTTTTGTGTACAATACACACGATGCGTAGGACTTGGACATGCGATTTAGCTGGAAATCAAGGTAGAATAAACAATAGGGTGCTATTTGGTCGGTCAAAGGTCAGTTACAATGGCAATTTGGGAGTTAGAGGTTAATTAGCAGGTTCTGCACATTTGTATAGGCATTTTGGATTAGTAGGCAACAACTGAGTCTCTTAGTTGTGACTTGTGAGGGGAAACTGGTTTATTTGCCTTATTTTCTCTCCATTGCAGGAATAACAGTGTTCTTTCTCTCTTTCCCCCATACACTTTCCCTGCTTGTACTACTTGTTATGTCCTGTGGTTTTTCTGGTTCCTATGATTACAATAGGTTCCTGAATTGTATATCCCATAAAACATTTATTGAAAAATGAGTAGTTTGTCAGTTTGAAACTAAACGGGGGGTTTGCATTGGTTTCATAAAAATTCTTAAGGGGAGTTCAACGTGTTATAGTTATACCATACTCTTTTTGTGTGTTGAATTTTTTCTTGCGTTAGGATTGGTAATATCTTCCCATGTTTGTGAGATATTATTTAGACAACATTTGTTGTTTTATAATATGCAGATGATCGAGAGGTTGATCCAGAGGAGTTCATCATGATGATGAACACAACAGGCTACCGTCACTAG

Protein sequence

>MS.gene92775.t1

MSSSILRGDSRRFNNKQRGKHHLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMIADVDRDGSGAIDYDEFEHMMTAKIGERDTKEELMKAFHIIDQDKNGKISASDIKRIAKELGQNFTDREIQEMVDEADQNNDREVDPEEFIMMMNTTGYRH