AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27516


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27516.t1 MTR_7g074020 98.830 171 2 0 1 171 1 171 2.10e-123 344
MS.gene27516.t1 MTR_6g007613 92.308 169 13 0 3 171 2 170 7.84e-114 320
MS.gene27516.t1 MTR_7g074020 98.013 151 3 0 1 151 1 151 1.00e-105 299
MS.gene27516.t1 MTR_6g007613 92.617 149 11 0 3 151 2 150 5.32e-99 282
MS.gene27516.t1 MTR_5g088320 44.755 143 79 0 22 164 4 146 9.96e-39 129
MS.gene27516.t1 MTR_5g088320 46.970 66 35 0 29 94 84 149 3.42e-12 61.2
MS.gene27516.t1 MTR_6g025320 44.755 143 79 0 22 164 4 146 2.35e-38 128
MS.gene27516.t1 MTR_6g025320 46.970 66 35 0 29 94 84 149 3.60e-12 61.2
MS.gene27516.t1 MTR_1g076650 43.151 146 83 0 21 166 3 148 2.59e-38 128
MS.gene27516.t1 MTR_7g087610 44.056 143 80 0 22 164 4 146 6.47e-38 127
MS.gene27516.t1 MTR_7g087610 48.485 66 34 0 29 94 84 149 7.10e-13 63.2
MS.gene27516.t1 MTR_1g041285 44.521 146 81 0 23 168 5 150 4.87e-37 125
MS.gene27516.t1 MTR_1g071150 38.776 147 87 2 21 165 3 148 5.76e-28 102
MS.gene27516.t1 MTR_1g071150 41.667 72 38 1 20 91 78 145 7.81e-11 57.8
MS.gene27516.t1 MTR_0168s0120 42.727 110 63 0 55 164 1 110 9.84e-27 97.8
MS.gene27516.t1 MTR_0168s0120 46.970 66 35 0 29 94 48 113 1.10e-12 61.6
MS.gene27516.t1 MTR_6g025320 42.727 110 63 0 55 164 1 110 9.84e-27 97.8
MS.gene27516.t1 MTR_6g025320 46.970 66 35 0 29 94 48 113 1.10e-12 61.6
MS.gene27516.t1 MTR_1g032070 37.410 139 87 0 26 164 42 180 6.48e-23 90.5
MS.gene27516.t1 MTR_7g106710 34.965 143 90 2 22 164 432 571 3.17e-22 92.8
MS.gene27516.t1 MTR_7g115040 36.986 146 92 0 22 167 4 149 6.07e-22 86.7
MS.gene27516.t1 MTR_1g055255 35.417 144 90 2 22 165 421 561 1.25e-21 91.3
MS.gene27516.t1 MTR_8g105230 35.915 142 90 1 30 171 36 176 1.31e-21 87.0
MS.gene27516.t1 MTR_8g105230 49.153 59 30 0 29 87 108 166 3.35e-13 64.7
MS.gene27516.t1 MTR_4g067270 32.394 142 94 1 30 169 5 146 3.61e-21 84.7
MS.gene27516.t1 MTR_3g067610 36.429 140 85 2 28 167 3 138 7.40e-21 83.6
MS.gene27516.t1 MTR_3g067610 38.961 77 47 0 16 92 60 136 3.04e-12 61.2
MS.gene27516.t1 MTR_8g095440 36.620 142 87 2 23 164 328 466 1.39e-20 88.2
MS.gene27516.t1 MTR_7g075040 36.986 146 83 4 30 166 47 192 2.04e-20 84.0
MS.gene27516.t1 MTR_8g107110 34.559 136 88 1 30 165 24 158 2.27e-20 83.2
MS.gene27516.t1 MTR_5g079340 34.815 135 87 1 30 164 4 137 4.95e-20 81.6
MS.gene27516.t1 MTR_3g098070 35.915 142 88 2 23 164 327 465 6.09e-20 86.3
MS.gene27516.t1 MTR_8g066630 29.114 158 109 1 15 169 2 159 8.22e-20 81.6
MS.gene27516.t1 MTR_8g036075 36.364 143 83 3 30 164 49 191 1.17e-19 82.0
MS.gene27516.t1 MTR_5g092810 36.913 149 84 4 22 166 389 531 1.43e-19 85.1
MS.gene27516.t1 MTR_3g098090 37.313 134 81 2 31 164 338 468 2.45e-19 84.3
MS.gene27516.t1 MTR_5g009830 33.803 142 92 2 23 164 364 503 3.67e-19 84.0
MS.gene27516.t1 MTR_8g099095 34.266 143 92 2 22 164 363 503 4.58e-19 83.6
MS.gene27516.t1 MTR_5g011850 29.577 142 98 1 23 164 5 144 2.05e-18 77.4
MS.gene27516.t1 MTR_1g096490 32.394 142 93 2 23 164 328 466 2.59e-18 81.6
MS.gene27516.t1 MTR_5g099240 32.394 142 93 2 23 164 394 532 6.36e-18 80.5
MS.gene27516.t1 MTR_5g099240 32.394 142 93 2 23 164 322 460 6.59e-18 80.5
MS.gene27516.t1 MTR_7g106710 33.846 130 83 2 22 151 432 558 9.79e-18 80.1
MS.gene27516.t1 MTR_1g041150 33.099 142 92 2 23 164 416 554 1.11e-17 79.7
MS.gene27516.t1 MTR_4g112460 30.657 137 93 2 30 164 11 147 1.24e-17 75.9
MS.gene27516.t1 MTR_0028s0170 34.266 143 90 3 23 164 376 515 1.39e-17 79.3
MS.gene27516.t1 MTR_5g089320 32.867 143 92 3 23 164 366 505 2.54e-17 78.6
MS.gene27516.t1 MTR_1g046950 31.387 137 92 1 30 164 4 140 4.00e-17 73.9
MS.gene27516.t1 MTR_1g046950 39.394 66 40 0 27 92 76 141 1.41e-11 59.3
MS.gene27516.t1 MTR_4g086260 31.013 158 106 2 14 171 41 195 4.33e-17 75.1
MS.gene27516.t1 MTR_4g107490 33.113 151 97 4 22 170 370 518 6.22e-17 77.8
MS.gene27516.t1 MTR_4g132070 33.562 146 93 3 22 166 388 530 6.73e-17 77.4
MS.gene27516.t1 MTR_1g026190 33.103 145 91 3 22 164 379 519 3.44e-16 75.5
MS.gene27516.t1 MTR_7g090450 31.081 148 97 3 23 165 66 213 3.54e-16 73.2
MS.gene27516.t1 MTR_8g078270 31.690 142 95 2 24 164 47 187 6.01e-16 72.0
MS.gene27516.t1 MTR_4g132040 35.766 137 84 3 31 166 401 534 1.31e-15 73.9
MS.gene27516.t1 MTR_1g054865 29.054 148 102 2 22 169 458 602 1.58e-15 73.6
MS.gene27516.t1 MTR_7g089760 31.690 142 95 1 30 169 5 146 1.77e-15 70.1
MS.gene27516.t1 MTR_5g017510 34.028 144 90 4 25 165 43 184 2.47e-15 70.5
MS.gene27516.t1 MTR_5g017560 34.028 144 90 4 25 165 43 184 2.47e-15 70.5
MS.gene27516.t1 MTR_5g017550 33.099 142 93 2 25 165 43 183 2.80e-15 70.1
MS.gene27516.t1 MTR_8g069915 26.573 143 103 1 24 164 6 148 5.93e-15 68.9
MS.gene27516.t1 MTR_3g051770 33.548 155 88 5 22 166 380 529 7.64e-15 71.6
MS.gene27516.t1 MTR_7g068710 30.201 149 102 2 23 170 354 501 1.91e-14 70.5
MS.gene27516.t1 MTR_7g074240 29.333 150 92 3 31 167 25 173 2.03e-14 67.8
MS.gene27516.t1 MTR_6g079570 43.077 65 37 0 31 95 100 164 6.35e-14 66.2
MS.gene27516.t1 MTR_6g079570 29.932 147 93 3 30 171 26 167 7.22e-12 60.8
MS.gene27516.t1 MTR_2g098890 29.167 144 98 2 30 169 64 207 1.85e-13 65.9
MS.gene27516.t1 MTR_1g047100 30.657 137 92 2 30 164 4 139 2.44e-13 63.9
MS.gene27516.t1 MTR_1g047100 38.806 67 41 0 27 93 75 141 6.22e-11 57.8
MS.gene27516.t1 MTR_3g089070 31.250 128 87 1 38 165 14 140 5.90e-13 63.2
MS.gene27516.t1 MTR_3g089090 31.250 128 87 1 38 165 13 139 5.96e-13 63.2
MS.gene27516.t1 MTR_3g055570 30.137 146 87 1 23 168 45 175 9.19e-13 63.5
MS.gene27516.t1 MTR_4g103650 30.147 136 94 1 30 165 2 136 2.51e-12 61.2
MS.gene27516.t1 MTR_3g055520 29.787 141 84 1 23 163 45 170 4.14e-12 61.6
MS.gene27516.t1 MTR_3g083470 41.176 68 40 0 24 91 150 217 6.27e-12 62.0
MS.gene27516.t1 MTR_4g115170 28.750 160 94 4 28 168 62 220 6.37e-12 62.0
MS.gene27516.t1 MTR_5g008705 30.952 126 83 2 37 160 1 124 9.33e-12 59.7
MS.gene27516.t1 MTR_4g103630 29.630 135 94 1 30 164 6 139 1.52e-11 59.3
MS.gene27516.t1 MTR_6g023460 29.771 131 91 1 34 164 12 141 1.69e-11 59.3
MS.gene27516.t1 MTR_4g103655 29.412 136 95 1 30 165 6 140 3.10e-11 58.5
MS.gene27516.t1 MTR_1g052530 28.477 151 104 4 22 170 349 497 7.19e-11 60.1
MS.gene27516.t1 MTR_3g055585 30.216 139 82 1 23 161 45 168 7.52e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27516.t1 AT3G50360 75.449 167 39 1 3 169 2 166 3.16e-82 240
MS.gene27516.t1 AT4G37010 63.871 155 55 1 16 169 16 170 1.98e-65 198
MS.gene27516.t1 AT4G37010 63.871 155 55 1 16 169 12 166 2.37e-65 197
MS.gene27516.t1 AT5G37780 44.755 143 79 0 22 164 4 146 3.26e-39 130
MS.gene27516.t1 AT5G37780 48.485 66 34 0 29 94 84 149 1.01e-12 62.8
MS.gene27516.t1 AT1G66410 44.755 143 79 0 22 164 4 146 3.26e-39 130
MS.gene27516.t1 AT1G66410 48.485 66 34 0 29 94 84 149 1.01e-12 62.8
MS.gene27516.t1 AT3G56800 44.755 143 79 0 22 164 4 146 1.45e-38 129
MS.gene27516.t1 AT3G56800 46.970 66 35 0 29 94 84 149 2.73e-12 61.6
MS.gene27516.t1 AT2G27030 44.755 143 79 0 22 164 4 146 1.45e-38 129
MS.gene27516.t1 AT2G27030 46.970 66 35 0 29 94 84 149 2.73e-12 61.6
MS.gene27516.t1 AT2G41110 44.755 143 79 0 22 164 4 146 1.45e-38 129
MS.gene27516.t1 AT2G41110 46.970 66 35 0 29 94 84 149 2.73e-12 61.6
MS.gene27516.t1 AT2G27030 44.755 143 79 0 22 164 4 146 1.99e-38 130
MS.gene27516.t1 AT2G27030 46.970 66 35 0 29 94 84 149 1.89e-12 62.8
MS.gene27516.t1 AT3G43810 44.755 143 79 0 22 164 4 146 2.46e-38 128
MS.gene27516.t1 AT3G43810 46.970 66 35 0 29 94 84 149 3.77e-12 61.2
MS.gene27516.t1 AT3G43810 45.070 142 78 0 23 164 5 146 5.71e-38 129
MS.gene27516.t1 AT3G43810 46.154 65 35 0 29 93 84 148 1.53e-11 60.8
MS.gene27516.t1 AT5G21274 44.056 143 80 0 22 164 4 146 8.15e-38 127
MS.gene27516.t1 AT5G21274 45.455 66 36 0 29 94 84 149 1.19e-11 59.7
MS.gene27516.t1 AT3G22930 42.857 147 84 0 22 168 27 173 8.79e-37 125
MS.gene27516.t1 AT5G37780 40.506 158 79 1 22 164 4 161 2.24e-35 121
MS.gene27516.t1 AT5G37780 48.485 66 34 0 29 94 99 164 1.33e-12 62.8
MS.gene27516.t1 AT2G41110 41.290 155 79 1 22 164 4 158 6.93e-35 120
MS.gene27516.t1 AT2G41110 46.970 66 35 0 29 94 96 161 3.39e-12 61.6
MS.gene27516.t1 AT4G14640 41.549 142 83 0 23 164 6 147 2.33e-34 118
MS.gene27516.t1 AT5G37780 37.870 169 79 1 22 164 4 172 1.77e-33 117
MS.gene27516.t1 AT5G37780 48.485 66 34 0 29 94 110 175 1.45e-12 62.8
MS.gene27516.t1 AT1G66410 41.830 153 79 1 22 164 4 156 2.73e-33 116
MS.gene27516.t1 AT1G66410 48.485 66 34 0 29 94 94 159 1.05e-12 62.8
MS.gene27516.t1 AT5G37780 42.623 122 70 0 43 164 12 133 9.32e-31 108
MS.gene27516.t1 AT5G37780 48.485 66 34 0 29 94 71 136 6.79e-13 62.8
MS.gene27516.t1 AT1G66410 42.727 110 63 0 55 164 1 110 3.27e-27 99.4
MS.gene27516.t1 AT1G66410 48.485 66 34 0 29 94 48 113 3.14e-13 63.2
MS.gene27516.t1 AT1G66410 42.727 110 63 0 55 164 1 110 3.27e-27 99.4
MS.gene27516.t1 AT1G66410 48.485 66 34 0 29 94 48 113 3.14e-13 63.2
MS.gene27516.t1 AT3G43810 42.727 110 63 0 55 164 1 110 1.03e-26 97.8
MS.gene27516.t1 AT3G43810 46.970 66 35 0 29 94 48 113 1.15e-12 61.6
MS.gene27516.t1 AT3G43810 42.727 110 63 0 55 164 1 110 1.03e-26 97.8
MS.gene27516.t1 AT3G43810 46.970 66 35 0 29 94 48 113 1.15e-12 61.6
MS.gene27516.t1 AT1G24620 35.185 162 99 2 9 170 21 176 1.77e-26 99.4
MS.gene27516.t1 AT4G14640 38.843 121 74 0 44 164 9 129 2.38e-26 97.4
MS.gene27516.t1 AT4G14640 50.794 63 31 0 29 91 67 129 3.38e-14 66.2
MS.gene27516.t1 AT3G22930 44.762 105 58 0 22 126 27 131 3.74e-26 97.1
MS.gene27516.t1 AT4G14640 42.718 103 59 0 23 125 6 108 1.39e-23 90.1
MS.gene27516.t1 AT5G23580 37.324 142 86 2 23 164 320 458 2.20e-22 93.2
MS.gene27516.t1 AT3G51920 34.014 147 97 0 23 169 5 151 5.51e-22 87.0
MS.gene27516.t1 AT2G41100 32.704 159 90 2 23 164 59 217 7.84e-22 89.7
MS.gene27516.t1 AT2G41100 33.654 104 66 1 10 113 136 236 1.58e-12 64.3
MS.gene27516.t1 AT2G41100 27.778 126 75 2 55 164 2 127 8.03e-11 59.7
MS.gene27516.t1 AT2G41100 32.704 159 90 2 23 164 59 217 7.84e-22 89.7
MS.gene27516.t1 AT2G41100 33.654 104 66 1 10 113 136 236 1.58e-12 64.3
MS.gene27516.t1 AT2G41100 27.778 126 75 2 55 164 2 127 8.03e-11 59.7
MS.gene27516.t1 AT2G41100 32.704 159 90 2 23 164 59 217 7.84e-22 89.7
MS.gene27516.t1 AT2G41100 33.654 104 66 1 10 113 136 236 1.58e-12 64.3
MS.gene27516.t1 AT2G41100 27.778 126 75 2 55 164 2 127 8.03e-11 59.7
MS.gene27516.t1 AT2G41090 33.333 144 93 1 21 164 3 143 1.10e-21 87.0
MS.gene27516.t1 AT2G41100 32.704 159 90 2 23 164 94 252 1.36e-21 89.7
MS.gene27516.t1 AT2G41100 31.013 158 93 2 23 164 5 162 1.21e-19 84.3
MS.gene27516.t1 AT2G41100 33.654 104 66 1 10 113 171 271 2.18e-12 64.3
MS.gene27516.t1 AT2G41100 32.704 159 90 2 23 164 94 252 1.36e-21 89.7
MS.gene27516.t1 AT2G41100 31.013 158 93 2 23 164 5 162 1.21e-19 84.3
MS.gene27516.t1 AT2G41100 33.654 104 66 1 10 113 171 271 2.18e-12 64.3
MS.gene27516.t1 AT2G43290 34.459 148 90 3 29 169 64 211 1.93e-21 87.0
MS.gene27516.t1 AT1G05990 35.664 143 89 2 30 169 5 147 3.05e-21 85.1
MS.gene27516.t1 AT1G12310 31.507 146 98 1 19 164 2 145 1.08e-20 83.6
MS.gene27516.t1 AT5G19360 35.915 142 89 2 23 164 366 505 1.12e-20 88.2
MS.gene27516.t1 AT1G18530 33.333 141 91 2 26 164 4 143 1.96e-20 83.2
MS.gene27516.t1 AT3G25600 32.609 138 91 1 29 164 11 148 3.21e-20 82.8
MS.gene27516.t1 AT5G12180 35.211 142 90 2 23 164 371 510 3.81e-20 87.0
MS.gene27516.t1 AT1G18210 33.824 136 86 1 29 164 22 153 4.59e-20 82.4
MS.gene27516.t1 AT1G18210 39.130 69 42 0 24 92 86 154 3.62e-11 58.9
MS.gene27516.t1 AT1G18210 33.824 136 86 1 29 164 22 153 4.59e-20 82.4
MS.gene27516.t1 AT1G18210 39.130 69 42 0 24 92 86 154 3.62e-11 58.9
MS.gene27516.t1 AT1G62820 31.034 145 98 1 20 164 3 145 7.37e-20 81.3
MS.gene27516.t1 AT2G36180 38.732 142 84 2 33 171 3 144 9.41e-20 80.9
MS.gene27516.t1 AT1G32250 30.065 153 101 1 23 169 9 161 1.13e-19 81.3
MS.gene27516.t1 AT4G09570 34.507 142 90 2 23 164 323 461 1.20e-19 85.5
MS.gene27516.t1 AT1G66400 33.099 142 93 1 29 168 14 155 2.72e-19 80.1
MS.gene27516.t1 AT1G35670 33.803 142 91 2 23 164 324 462 4.95e-19 83.6
MS.gene27516.t1 AT3G20410 36.429 140 83 3 29 166 395 530 1.23e-18 82.4
MS.gene27516.t1 AT3G20410 36.429 140 83 3 29 166 395 530 1.23e-18 82.4
MS.gene27516.t1 AT2G15680 31.361 169 107 2 5 166 18 184 1.26e-18 79.0
MS.gene27516.t1 AT1G73630 29.605 152 103 1 15 166 5 152 1.54e-18 78.2
MS.gene27516.t1 AT5G37770 32.867 143 92 1 30 168 17 159 1.80e-18 78.2
MS.gene27516.t1 AT5G37770 32.867 143 92 1 30 168 17 159 1.80e-18 78.2
MS.gene27516.t1 AT3G59440 30.556 144 97 2 30 171 51 193 2.74e-18 78.6
MS.gene27516.t1 AT1G76040 37.241 145 85 4 22 164 408 548 5.09e-18 80.9
MS.gene27516.t1 AT1G76040 37.241 145 85 4 22 164 170 310 5.50e-18 79.7
MS.gene27516.t1 AT1G76040 37.241 145 85 4 22 164 170 310 5.50e-18 79.7
MS.gene27516.t1 AT1G61950 33.987 153 95 3 21 171 395 543 7.96e-18 80.1
MS.gene27516.t1 AT2G17290 33.099 142 92 2 23 164 383 521 1.59e-17 79.3
MS.gene27516.t1 AT2G17290 33.099 142 92 2 23 164 383 521 1.59e-17 79.3
MS.gene27516.t1 AT4G21940 34.247 146 90 3 23 166 399 540 1.62e-17 79.3
MS.gene27516.t1 AT4G21940 34.247 146 90 3 23 166 399 540 1.83e-17 79.3
MS.gene27516.t1 AT4G04720 33.333 144 94 2 23 166 377 518 2.14e-17 79.0
MS.gene27516.t1 AT4G04720 33.333 144 94 2 23 166 377 518 2.14e-17 79.0
MS.gene27516.t1 AT1G50700 35.000 140 85 3 29 166 377 512 2.68e-17 78.6
MS.gene27516.t1 AT2G38910 31.293 147 98 2 23 169 432 575 2.91e-17 78.6
MS.gene27516.t1 AT4G38230 32.394 142 93 2 23 164 322 460 5.24e-17 77.8
MS.gene27516.t1 AT4G38230 32.394 142 93 2 23 164 322 460 5.24e-17 77.8
MS.gene27516.t1 AT4G38230 32.394 142 93 2 23 164 352 490 5.34e-17 77.8
MS.gene27516.t1 AT4G38230 32.394 142 93 2 23 164 178 316 6.82e-17 77.0
MS.gene27516.t1 AT4G35310 32.394 142 93 2 23 164 395 533 9.40e-17 77.0
MS.gene27516.t1 AT4G35310 32.394 142 93 2 23 164 395 533 9.40e-17 77.0
MS.gene27516.t1 AT4G04710 34.965 143 89 3 23 164 330 469 1.04e-16 77.0
MS.gene27516.t1 AT4G04710 34.965 143 89 3 23 164 316 455 1.40e-16 76.6
MS.gene27516.t1 AT4G04710 34.965 143 89 3 23 164 343 482 1.47e-16 76.6
MS.gene27516.t1 AT5G04870 31.690 142 94 2 23 164 448 586 2.56e-16 75.9
MS.gene27516.t1 AT4G12860 30.556 144 98 1 28 169 3 146 4.50e-16 71.6
MS.gene27516.t1 AT4G23650 30.769 143 97 2 22 164 375 515 9.06e-16 74.3
MS.gene27516.t1 AT3G10660 30.986 142 95 2 23 164 484 622 9.32e-16 74.3
MS.gene27516.t1 AT3G10660 30.986 142 95 2 23 164 484 622 9.32e-16 74.3
MS.gene27516.t1 AT4G03290 30.714 140 92 2 30 164 5 144 1.40e-15 70.5
MS.gene27516.t1 AT3G07490 30.986 142 96 1 30 169 5 146 1.47e-15 70.1
MS.gene27516.t1 AT5G17470 36.232 138 86 2 31 166 3 140 1.63e-15 70.1
MS.gene27516.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene27516.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene27516.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene27516.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene27516.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene27516.t1 AT4G04740 32.192 146 93 3 23 166 366 507 1.73e-15 73.6
MS.gene27516.t1 AT4G04710 35.172 145 88 4 23 164 343 484 1.81e-15 73.6
MS.gene27516.t1 AT4G04700 32.414 145 96 2 22 166 328 470 2.69e-15 72.8
MS.gene27516.t1 AT5G42380 28.676 136 96 1 30 164 49 184 8.08e-15 68.9
MS.gene27516.t1 AT4G04695 31.034 145 98 2 22 166 328 470 1.97e-14 70.5
MS.gene27516.t1 AT3G03000 27.027 148 107 1 23 169 13 160 1.15e-13 65.5
MS.gene27516.t1 AT3G50770 29.762 168 111 3 2 164 38 203 1.60e-13 65.9
MS.gene27516.t1 AT3G57530 29.412 153 99 6 22 170 360 507 3.65e-13 66.6
MS.gene27516.t1 AT3G51850 30.201 149 102 2 23 170 352 499 3.74e-13 66.6
MS.gene27516.t1 AT1G74740 28.477 151 104 4 22 170 356 504 3.95e-13 66.6
MS.gene27516.t1 AT1G50700 29.518 166 85 4 29 166 377 538 4.70e-13 66.6
MS.gene27516.t1 AT2G41100 29.921 127 72 2 55 164 1 127 4.78e-13 64.7
MS.gene27516.t1 AT2G41100 33.654 104 66 1 10 113 46 146 6.51e-13 64.3
MS.gene27516.t1 AT3G10190 32.609 138 90 3 30 165 70 206 4.80e-13 64.7
MS.gene27516.t1 AT5G12480 27.815 151 106 3 22 170 262 411 5.33e-13 66.2
MS.gene27516.t1 AT5G12480 27.815 151 106 3 22 170 356 505 5.66e-13 66.2
MS.gene27516.t1 AT2G41100 36.264 91 55 1 23 113 5 92 5.74e-13 63.2
MS.gene27516.t1 AT2G41410 31.159 138 92 3 30 164 70 207 4.26e-12 62.4
MS.gene27516.t1 AT4G04740 31.298 131 84 3 23 151 366 492 4.61e-12 63.5
MS.gene27516.t1 AT3G03400 31.452 124 83 1 31 152 6 129 4.79e-12 60.5
MS.gene27516.t1 AT1G76640 27.083 144 103 1 23 164 15 158 5.56e-12 60.8
MS.gene27516.t1 AT2G41860 28.289 152 103 4 22 170 351 499 9.82e-12 62.8
MS.gene27516.t1 AT2G41860 28.289 152 103 4 22 170 351 499 1.10e-11 62.4
MS.gene27516.t1 AT1G18890 29.605 152 101 5 22 170 360 508 3.06e-11 61.2

Find 32 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTGTTGTTGAATCTTC+TGG 0.148468 7.3:+31072739 None:intergenic
AGTGTCTCTTTCTCCTATTT+TGG 0.237506 7.3:+31071859 None:intergenic
CAGTCATCTTCTATACTTAG+AGG 0.308294 7.3:-31072767 MS.gene27516:CDS
TTTGTGGAAACTTACTATTT+TGG 0.351393 7.3:+31071606 None:intergenic
TCTTATCTTTGTAGGGCCCT+TGG 0.375272 7.3:-31072432 MS.gene27516:intron
CACATGATGACGGCCAAAAT+AGG 0.383388 7.3:-31071872 MS.gene27516:CDS
ATCATCATGATGAACTCCTC+TGG 0.458576 7.3:+31069985 None:intergenic
AAATGATAGCAGATGTCGAC+AGG 0.463318 7.3:-31071931 MS.gene27516:CDS
ATCATGATGATGAACACAAC+AGG 0.494636 7.3:-31069973 MS.gene27516:CDS
TTATTCGACACTGATGGCTC+AGG 0.496240 7.3:-31072659 MS.gene27516:intron
TGTATTGTAGGGTAAGATAT+CGG 0.507847 7.3:-31071711 MS.gene27516:intron
CATAGCAACATTAAGCTCCT+TGG 0.513823 7.3:+31072532 None:intergenic
TTTAGGTACTATTGATGCCA+AGG 0.521565 7.3:-31072549 MS.gene27516:intron
TGATAGAGAGATTCAGGAGA+TGG 0.522125 7.3:-31071642 MS.gene27516:CDS
TTTGAATTATTCGACACTGA+TGG 0.531996 7.3:-31072665 MS.gene27516:CDS
CTTCAGTCATCTCAAATCCA+AGG 0.540688 7.3:+31072415 None:intergenic
TAGCAGATGTCGACAGGGAT+GGG 0.548013 7.3:-31071925 MS.gene27516:CDS
AAGCGGATTGCAAAAGAGCT+AGG 0.569005 7.3:-31071677 MS.gene27516:CDS
AGGAGAAAGAGACACTAAAG+AGG 0.570607 7.3:-31071852 MS.gene27516:CDS
ATAGCAGATGTCGACAGGGA+TGG 0.573080 7.3:-31071926 MS.gene27516:CDS
GATGTCGACAGGGATGGGAG+TGG 0.578755 7.3:-31071920 MS.gene27516:CDS
TTCAGTCATCTCAAATCCAA+GGG 0.589829 7.3:+31072416 None:intergenic
TGATCGAGAGGTTGATCCAG+AGG 0.590124 7.3:-31070001 MS.gene27516:CDS
TGGATTTGAGATGACTGAAG+AGG 0.608260 7.3:-31072412 MS.gene27516:intron
AGGAGCTTAATGTTGCTATG+AGG 0.614526 7.3:-31072529 MS.gene27516:intron
GTAGGGTAAGATATCGGCAT+CGG 0.618796 7.3:-31071705 MS.gene27516:intron
AGATTCAACAACAAACAAAG+AGG 0.630713 7.3:-31072734 MS.gene27516:CDS
ATAATATGCAGATGATCGAG+AGG 0.639575 7.3:-31070013 MS.gene27516:intron
GATGTAGATATGACTAGTGA+CGG 0.656087 7.3:+31069947 None:intergenic
TGAATTTGAGCACATGATGA+CGG 0.665935 7.3:-31071882 MS.gene27516:CDS
TATCGGCATCGGATATCAAG+CGG 0.676928 7.3:-31071694 MS.gene27516:CDS
AATGATAGCAGATGTCGACA+GGG 0.695960 7.3:-31071930 MS.gene27516:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATGTTTTTCATAATAAT+TGG - chr7.3:31070400-31070419 MS.gene27516:intron 10.0%
!!! AAACTAATATATTTTAACAA+TGG + chr7.3:31071899-31071918 None:intergenic 10.0%
!!! AAATGTTTTTCATAATAATT+GGG - chr7.3:31070401-31070420 MS.gene27516:intron 10.0%
!!! ATTTTTCAATAAATGTTTTA+TGG + chr7.3:31072668-31072687 None:intergenic 10.0%
!!! TTTTTCAATAAATGTTTTAT+GGG + chr7.3:31072667-31072686 None:intergenic 10.0%
!! AATAGATTAAAGTATAGAAT+AGG - chr7.3:31072246-31072265 MS.gene27516:intron 15.0%
!! ATAAGAAATAATAGTATCAT+TGG - chr7.3:31071422-31071441 MS.gene27516:intron 15.0%
!! ATATATATATATAATCCCTA+AGG - chr7.3:31071931-31071950 MS.gene27516:CDS 15.0%
!! TAAAAAGTAAACATAATGAT+TGG - chr7.3:31071638-31071657 MS.gene27516:CDS 15.0%
!!! CTTTTAACTTTGTTTTTTAT+GGG + chr7.3:31072209-31072228 None:intergenic 15.0%
!!! TACTTTGTTTAATGATTTTT+AGG - chr7.3:31070318-31070337 MS.gene27516:intron 15.0%
!!! TTTTAACTTTGTTTTTTATG+GGG + chr7.3:31072208-31072227 None:intergenic 15.0%
!! AAATAATATCTCACAAACAT+GGG + chr7.3:31072832-31072851 None:intergenic 20.0%
!! ATCTTATTCTTATCTTTGTA+GGG - chr7.3:31070445-31070464 MS.gene27516:intron 20.0%
!! CCATAAAAAACAAAGTTAAA+AGG - chr7.3:31072207-31072226 MS.gene27516:intron 20.0%
!! CTTATACTAATTTAGAGATA+GGG - chr7.3:31070786-31070805 MS.gene27516:intron 20.0%
!! GGTAATTAATGTTTATGTTT+GGG - chr7.3:31070546-31070565 MS.gene27516:intron 20.0%
!! GGTTTCATAAAAATTCTTAA+GGG - chr7.3:31072729-31072748 MS.gene27516:CDS 20.0%
!! GTTTCATAAAAATTCTTAAG+GGG - chr7.3:31072730-31072749 MS.gene27516:CDS 20.0%
!! TAAATAATATCTCACAAACA+TGG + chr7.3:31072833-31072852 None:intergenic 20.0%
!! TCTTATACTAATTTAGAGAT+AGG - chr7.3:31070785-31070804 MS.gene27516:intron 20.0%
!! TGGTTTCATAAAAATTCTTA+AGG - chr7.3:31072728-31072747 MS.gene27516:CDS 20.0%
!!! ATTTTAATTAGAGTACCTTA+AGG - chr7.3:31071727-31071746 MS.gene27516:intron 20.0%
!!! CATTAAACAAAGTATTAGTA+TGG + chr7.3:31070312-31070331 None:intergenic 20.0%
!!! CCTTTTAACTTTGTTTTTTA+TGG + chr7.3:31072210-31072229 None:intergenic 20.0%
!!! TAAAAATTTTACATCTCACA+TGG - chr7.3:31071329-31071348 MS.gene27516:intron 20.0%
!!! TATGATTCATTTTTATTGTC+AGG + chr7.3:31071613-31071632 None:intergenic 20.0%
!!! TTTGTCAGTTTGAAATTAAA+CGG - chr7.3:31072694-31072713 MS.gene27516:CDS 20.0%
!!! TTTTGTCTTGATCAATAATA+TGG + chr7.3:31071074-31071093 None:intergenic 20.0%
! AAATGCTACAACAATAAAAG+AGG + chr7.3:31070753-31070772 None:intergenic 25.0%
! ACACAAAAATTATAAGTTCC+AGG + chr7.3:31072287-31072306 None:intergenic 25.0%
! AGATTATGTACAATATTGTC+AGG - chr7.3:31070847-31070866 MS.gene27516:intron 25.0%
! AGTATTAGTATGGTATAAAG+AGG + chr7.3:31070302-31070321 None:intergenic 25.0%
! ATCAAGGTAGAATAAACAAT+AGG - chr7.3:31072353-31072372 MS.gene27516:intron 25.0%
! CATCTTATTCTTATCTTTGT+AGG - chr7.3:31070444-31070463 MS.gene27516:intron 25.0%
! CGGTAATTAATGTTTATGTT+TGG - chr7.3:31070545-31070564 MS.gene27516:intron 25.0%
! CGTATTTGTATATCATTCTA+CGG - chr7.3:31071352-31071371 MS.gene27516:intron 25.0%
! GTAGAAAATCACAGATTTAA+AGG + chr7.3:31071453-31071472 None:intergenic 25.0%
! TCAAGGTAGAATAAACAATA+GGG - chr7.3:31072354-31072373 MS.gene27516:intron 25.0%
! TGATATTTACACAAAAGACT+AGG + chr7.3:31070696-31070715 None:intergenic 25.0%
! TTATGAACGCTAAACTTAAA+AGG + chr7.3:31071986-31072005 None:intergenic 25.0%
!! TTGTCAGTTTGAAATTAAAC+GGG - chr7.3:31072695-31072714 MS.gene27516:CDS 25.0%
!! TTTGTGGAAACTTACTATTT+TGG + chr7.3:31071281-31071300 None:intergenic 25.0%
!! TTTTATGGGATATACAATTC+AGG + chr7.3:31072653-31072672 None:intergenic 25.0%
!!! CAAGAATATTTTTGACTACA+TGG + chr7.3:31070275-31070294 None:intergenic 25.0%
!!! TGATTCTCATTGTATTTTTG+TGG - chr7.3:31071146-31071165 MS.gene27516:intron 25.0%
ACATAATTTGAGCTATAGAG+AGG - chr7.3:31071671-31071690 MS.gene27516:CDS 30.0%
AGATTCAACAACAAACAAAG+AGG - chr7.3:31070150-31070169 MS.gene27516:intron 30.0%
ATTATAAGTTCCAGGTGATA+TGG + chr7.3:31072279-31072298 None:intergenic 30.0%
ATTGTTGTAGCATTTAGCTA+TGG - chr7.3:31070758-31070777 MS.gene27516:intron 30.0%
ATTTAGAGATAGGGATTCAA+TGG - chr7.3:31070795-31070814 MS.gene27516:intron 30.0%
CATAATTTGAGCTATAGAGA+GGG - chr7.3:31071672-31071691 MS.gene27516:CDS 30.0%
CTAAAAAGTTAGAACTAGCA+AGG + chr7.3:31071309-31071328 None:intergenic 30.0%
TACCTTAAGGTAATATTTGC+TGG - chr7.3:31071740-31071759 MS.gene27516:intron 30.0%
TGTATTGTAGGGTAAGATAT+CGG - chr7.3:31071173-31071192 MS.gene27516:intron 30.0%
TTCAACACACAAAAAGAGTA+TGG + chr7.3:31072778-31072797 None:intergenic 30.0%
TTTGAATTATTCGACACTGA+TGG - chr7.3:31070219-31070238 MS.gene27516:intron 30.0%
! AGACTAGGAATTATTTTCCT+TGG + chr7.3:31070681-31070700 None:intergenic 30.0%
! AGGTATTGTTGTTATTCACA+AGG - chr7.3:31070375-31070394 MS.gene27516:intron 30.0%
! TGTCAGTTTGAAATTAAACG+GGG - chr7.3:31072696-31072715 MS.gene27516:CDS 30.0%
! TTTTACTGATAGAGAGATTC+AGG - chr7.3:31071236-31071255 MS.gene27516:intron 30.0%
! TTTTAGTACTCACGTAGTTT+CGG - chr7.3:31071502-31071521 MS.gene27516:intron 30.0%
!! AATTTGCTGAAATGACACAA+TGG + chr7.3:31070929-31070948 None:intergenic 30.0%
!! ATAAACAATAGGGTGCTATT+TGG - chr7.3:31072364-31072383 MS.gene27516:intron 30.0%
!! TTGTTTGTTGTTGAATCTTC+TGG + chr7.3:31070148-31070167 None:intergenic 30.0%
!!! ATTTTTTCTTGCGTTAGGAT+TGG - chr7.3:31072797-31072816 MS.gene27516:intron 30.0%
!!! GTTGAATTTTTTCTTGCGTT+AGG - chr7.3:31072792-31072811 MS.gene27516:intron 30.0%
!!! TATAGGCATTTTGGATTAGT+AGG - chr7.3:31072454-31072473 MS.gene27516:intron 30.0%
AACTAGCAAGGATATGTTTG+TGG + chr7.3:31071297-31071316 None:intergenic 35.0%
ACAACATAATATGCAACGAG+TGG + chr7.3:31070523-31070542 None:intergenic 35.0%
ACATAACAAGTAGTACAAGC+AGG + chr7.3:31072593-31072612 None:intergenic 35.0%
ATAATATGCAGATGATCGAG+AGG - chr7.3:31072871-31072890 MS.gene27516:intron 35.0%
CAACGAGTGGTTATAAAAAG+GGG + chr7.3:31070510-31070529 None:intergenic 35.0%
CACCAGCAAATATTACCTTA+AGG + chr7.3:31071745-31071764 None:intergenic 35.0%
CAGGAACCTATTGTAATCAT+AGG + chr7.3:31072634-31072653 None:intergenic 35.0%
CAGTCATCTTCTATACTTAG+AGG - chr7.3:31070117-31070136 MS.gene27516:intron 35.0%
CATAACAAGTAGTACAAGCA+GGG + chr7.3:31072592-31072611 None:intergenic 35.0%
CTGGTTCCTATGATTACAAT+AGG - chr7.3:31072625-31072644 MS.gene27516:intron 35.0%
GACATTCATGTAAACATCGA+AGG - chr7.3:31071563-31071582 MS.gene27516:intron 35.0%
GACTACATGGTTATTGTTGA+TGG + chr7.3:31070262-31070281 None:intergenic 35.0%
GAGTTACTACATCAACCTTA+GGG + chr7.3:31071949-31071968 None:intergenic 35.0%
GCAACGAGTGGTTATAAAAA+GGG + chr7.3:31070511-31070530 None:intergenic 35.0%
GTCAGTTACAATGGCAATTT+GGG - chr7.3:31072397-31072416 MS.gene27516:intron 35.0%
TAGAGAGGGAATCTGATATA+TGG - chr7.3:31071686-31071705 MS.gene27516:CDS 35.0%
TGAATTTGAGCACATGATGA+CGG - chr7.3:31071002-31071021 MS.gene27516:intron 35.0%
TGAGTTACTACATCAACCTT+AGG + chr7.3:31071950-31071969 None:intergenic 35.0%
TGATATATGGTTGCATTGCA+TGG - chr7.3:31071699-31071718 MS.gene27516:CDS 35.0%
TGCAACGAGTGGTTATAAAA+AGG + chr7.3:31070512-31070531 None:intergenic 35.0%
TGTTCCTAACAACTTACCTT+CGG + chr7.3:31071789-31071808 None:intergenic 35.0%
TTCAGTCATCTCAAATCCAA+GGG + chr7.3:31070471-31070490 None:intergenic 35.0%
TTTAGGTACTATTGATGCCA+AGG - chr7.3:31070335-31070354 MS.gene27516:intron 35.0%
TTTGTGGTCACTGTATTGTA+GGG - chr7.3:31071162-31071181 MS.gene27516:intron 35.0%
! AACTTACCTTCGGACATTTT+GGG + chr7.3:31071779-31071798 None:intergenic 35.0%
! AGTGTCTCTTTCTCCTATTT+TGG + chr7.3:31071028-31071047 None:intergenic 35.0%
! ATCATGATGATGAACACAAC+AGG - chr7.3:31072911-31072930 MS.gene27516:intron 35.0%
! ATTGAAAGTATAGTGCGCAT+TGG - chr7.3:31071473-31071492 MS.gene27516:intron 35.0%
! CTTAAGGTAATATTTGCTGG+TGG - chr7.3:31071743-31071762 MS.gene27516:intron 35.0%
! GCACATTTGTATAGGCATTT+TGG - chr7.3:31072445-31072464 MS.gene27516:intron 35.0%
! GGAATTATTTTCCTTGGCAA+CGG + chr7.3:31070675-31070694 None:intergenic 35.0%
! GTCAGTTTGAAATTAAACGG+GGG - chr7.3:31072697-31072716 MS.gene27516:CDS 35.0%
! TCAGTTTGAAATTAAACGGG+GGG - chr7.3:31072698-31072717 MS.gene27516:CDS 35.0%
! TTGAAAGTATAGTGCGCATT+GGG - chr7.3:31071474-31071493 MS.gene27516:intron 35.0%
! TTTTGTGGTCACTGTATTGT+AGG - chr7.3:31071161-31071180 MS.gene27516:intron 35.0%
!! AAAAGAGGTATCACAGAGAA+AGG + chr7.3:31070738-31070757 None:intergenic 35.0%
!! AAAGAGGTATCACAGAGAAA+GGG + chr7.3:31070737-31070756 None:intergenic 35.0%
AAATGATAGCAGATGTCGAC+AGG - chr7.3:31070953-31070972 MS.gene27516:intron 40.0%
AATGATAGCAGATGTCGACA+GGG - chr7.3:31070954-31070973 MS.gene27516:intron 40.0%
AATGGCAATTTGGGAGTTAG+AGG - chr7.3:31072406-31072425 MS.gene27516:intron 40.0%
AGGAGAAAGAGACACTAAAG+AGG - chr7.3:31071032-31071051 MS.gene27516:intron 40.0%
AGGAGCTTAATGTTGCTATG+AGG - chr7.3:31070355-31070374 MS.gene27516:intron 40.0%
ATAGGAACCAGAAAAACCAC+AGG + chr7.3:31072616-31072635 None:intergenic 40.0%
ATATCATTCTACGGTGAGCT+GGG - chr7.3:31071361-31071380 MS.gene27516:intron 40.0%
ATCATCATGATGAACTCCTC+TGG + chr7.3:31072902-31072921 None:intergenic 40.0%
ATGTCCGAAGGTAAGTTGTT+AGG - chr7.3:31071782-31071801 MS.gene27516:intron 40.0%
CAGGTTCTGCACATTTGTAT+AGG - chr7.3:31072437-31072456 MS.gene27516:intron 40.0%
CATAGCAACATTAAGCTCCT+TGG + chr7.3:31070355-31070374 None:intergenic 40.0%
CCTGCAATGGAGAGAAAATA+AGG + chr7.3:31072531-31072550 None:intergenic 40.0%
CGTTGCATATTATGTTGTCG+CGG - chr7.3:31070525-31070544 MS.gene27516:intron 40.0%
CTAAACTAACCCACCCAAAT+TGG + chr7.3:31072093-31072112 None:intergenic 40.0%
CTTCAGTCATCTCAAATCCA+AGG + chr7.3:31070472-31070491 None:intergenic 40.0%
GAACACTGTTATTCCTGCAA+TGG + chr7.3:31072544-31072563 None:intergenic 40.0%
GGAGTTAGAGGTTAATTAGC+AGG - chr7.3:31072418-31072437 MS.gene27516:CDS 40.0%
GGTCAGTTACAATGGCAATT+TGG - chr7.3:31072396-31072415 MS.gene27516:intron 40.0%
GTATCACAGAGAAAGGGAAT+TGG + chr7.3:31070731-31070750 None:intergenic 40.0%
TATATCATTCTACGGTGAGC+TGG - chr7.3:31071360-31071379 MS.gene27516:intron 40.0%
TATGTTCTGCCATATGGTAG+CGG - chr7.3:31072150-31072169 MS.gene27516:intron 40.0%
TGATAGAGAGATTCAGGAGA+TGG - chr7.3:31071242-31071261 MS.gene27516:intron 40.0%
TGCGATTTAGCTGGAAATCA+AGG - chr7.3:31072337-31072356 MS.gene27516:intron 40.0%
TGGTTATAAAAAGGGGCAGA+GGG + chr7.3:31070503-31070522 None:intergenic 40.0%
TTAGCGTTCATAACCCACTT+CGG - chr7.3:31071993-31072012 MS.gene27516:intron 40.0%
! CAACTTACCTTCGGACATTT+TGG + chr7.3:31071780-31071799 None:intergenic 40.0%
! CTCTTAGTTGTGACTTGTGA+GGG - chr7.3:31072489-31072508 MS.gene27516:intron 40.0%
! GGTGGAGATATGTGTGTTTT+AGG - chr7.3:31071382-31071401 MS.gene27516:intron 40.0%
! GTTATGTCCTGTGGTTTTTC+TGG - chr7.3:31072606-31072625 MS.gene27516:intron 40.0%
! TACAAGCAGGGAAAGTGTAT+GGG + chr7.3:31072580-31072599 None:intergenic 40.0%
! TCTCTTAGTTGTGACTTGTG+AGG - chr7.3:31072488-31072507 MS.gene27516:intron 40.0%
! TCTTAGTTGTGACTTGTGAG+GGG - chr7.3:31072490-31072509 MS.gene27516:intron 40.0%
! TGCTACTGTAACTTGCAAGA+TGG + chr7.3:31071873-31071892 None:intergenic 40.0%
! TGGATTTGAGATGACTGAAG+AGG - chr7.3:31070472-31070491 MS.gene27516:intron 40.0%
!! ACAATAGGGTGCTATTTGGT+CGG - chr7.3:31072368-31072387 MS.gene27516:intron 40.0%
!! GTACTACTTGTTATGTCCTG+TGG - chr7.3:31072597-31072616 MS.gene27516:intron 40.0%
!!! CCTTATTTTCTCTCCATTGC+AGG - chr7.3:31072528-31072547 MS.gene27516:intron 40.0%
AAGTTTAGCGTTCCTGCTGA+AGG - chr7.3:31072126-31072145 MS.gene27516:intron 45.0%
ACTTGGACATGCGATTTAGC+TGG - chr7.3:31072328-31072347 MS.gene27516:intron 45.0%
AGATCTCCCAAAATGTCCGA+AGG - chr7.3:31071770-31071789 MS.gene27516:intron 45.0%
AGTTTAGCGTTCCTGCTGAA+GGG - chr7.3:31072127-31072146 MS.gene27516:intron 45.0%
ATGTTCTGCCATATGGTAGC+GGG - chr7.3:31072151-31072170 MS.gene27516:intron 45.0%
ATTAAACGGGGGGTTTGCAT+TGG - chr7.3:31072708-31072727 MS.gene27516:CDS 45.0%
CGGTCAAAGGTCAGTTACAA+TGG - chr7.3:31072388-31072407 MS.gene27516:intron 45.0%
GAATCGAACATGTGACCTAG+AGG + chr7.3:31072061-31072080 None:intergenic 45.0%
GGTTATAAAAAGGGGCAGAG+GGG + chr7.3:31070502-31070521 None:intergenic 45.0%
GTACAATACACACGATGCGT+AGG - chr7.3:31072305-31072324 MS.gene27516:intron 45.0%
GTAGGGTAAGATATCGGCAT+CGG - chr7.3:31071179-31071198 MS.gene27516:intron 45.0%
GTGGTTATAAAAAGGGGCAG+AGG + chr7.3:31070504-31070523 None:intergenic 45.0%
GTTATAAAAAGGGGCAGAGG+GGG + chr7.3:31070501-31070520 None:intergenic 45.0%
TCTTATCTTTGTAGGGCCCT+TGG - chr7.3:31070452-31070471 MS.gene27516:intron 45.0%
TTATAAAAAGGGGCAGAGGG+GGG + chr7.3:31070500-31070519 None:intergenic 45.0%
TTATTCGACACTGATGGCTC+AGG - chr7.3:31070225-31070244 MS.gene27516:intron 45.0%
! ACAAGCAGGGAAAGTGTATG+GGG + chr7.3:31072579-31072598 None:intergenic 45.0%
! CTGTAACTTGCAAGATGGAG+TGG + chr7.3:31071868-31071887 None:intergenic 45.0%
! GAAGGGTATGTTCTGCCATA+TGG - chr7.3:31072144-31072163 MS.gene27516:intron 45.0%
! GTACAAGCAGGGAAAGTGTA+TGG + chr7.3:31072581-31072600 None:intergenic 45.0%
! TATCGGCATCGGATATCAAG+CGG - chr7.3:31071190-31071209 MS.gene27516:intron 45.0%
! TTTTCCTTGGCAACGGTCAA+TGG + chr7.3:31070668-31070687 None:intergenic 45.0%
!! AAGCGGATTGCAAAAGAGCT+AGG - chr7.3:31071207-31071226 MS.gene27516:intron 45.0%
!! CACATGATGACGGCCAAAAT+AGG - chr7.3:31071012-31071031 MS.gene27516:intron 45.0%
AGGTTCACAGCCATATCACC+TGG - chr7.3:31072266-31072285 MS.gene27516:intron 50.0%
ATAGCAGATGTCGACAGGGA+TGG - chr7.3:31070958-31070977 MS.gene27516:intron 50.0%
CGTTCATAACCCACTTCGGT+TGG - chr7.3:31071997-31072016 MS.gene27516:intron 50.0%
GTCACATGTTCGATTCTCCC+CGG - chr7.3:31072065-31072084 MS.gene27516:intron 50.0%
TAACCCACCCAAATTGGCAC+CGG + chr7.3:31072087-31072106 None:intergenic 50.0%
TACACACGATGCGTAGGACT+TGG - chr7.3:31072311-31072330 MS.gene27516:intron 50.0%
TAGCAGATGTCGACAGGGAT+GGG - chr7.3:31070959-31070978 MS.gene27516:intron 50.0%
TCATCCATTGACCGTTGCCA+AGG - chr7.3:31070661-31070680 MS.gene27516:intron 50.0%
TCGAACATGTGACCTAGAGG+AGG + chr7.3:31072058-31072077 None:intergenic 50.0%
! ATTCTCCCCGGTGCCAATTT+GGG - chr7.3:31072077-31072096 MS.gene27516:intron 50.0%
! CAAGCAGGGAAAGTGTATGG+GGG + chr7.3:31072578-31072597 None:intergenic 50.0%
! TGATCGAGAGGTTGATCCAG+AGG - chr7.3:31072883-31072902 MS.gene27516:intron 50.0%
! TGTGACTTGTGAGGGGAAAC+TGG - chr7.3:31072497-31072516 MS.gene27516:intron 50.0%
! TGTTCTGCCATATGGTAGCG+GGG - chr7.3:31072152-31072171 MS.gene27516:intron 50.0%
!! GGTGCTATTTGGTCGGTCAA+AGG - chr7.3:31072375-31072394 MS.gene27516:intron 50.0%
AACCCACCCAAATTGGCACC+GGG + chr7.3:31072086-31072105 None:intergenic 55.0%
ACCATCAGGCCAACCGAAGT+GGG + chr7.3:31072009-31072028 None:intergenic 55.0%
AGTCCTTCCCCGCTACCATA+TGG + chr7.3:31072162-31072181 None:intergenic 55.0%
CTAGAGTGTGCTCCTCCTCT+AGG - chr7.3:31072043-31072062 MS.gene27516:intron 55.0%
GATCCCAAGCCAACACCATC+AGG + chr7.3:31072023-31072042 None:intergenic 55.0%
GGCAGAACATACCCTTCAGC+AGG + chr7.3:31072141-31072160 None:intergenic 55.0%
TCATTCTACGGTGAGCTGGG+TGG - chr7.3:31071364-31071383 MS.gene27516:intron 55.0%
! CTAGAGGAGGAGCACACTCT+AGG + chr7.3:31072045-31072064 None:intergenic 55.0%
! GATTCTCCCCGGTGCCAATT+TGG - chr7.3:31072076-31072095 MS.gene27516:intron 55.0%
!! TGGCCTGATGGTGTTGGCTT+GGG - chr7.3:31072017-31072036 MS.gene27516:intron 55.0%
!! TTCGGTTGGCCTGATGGTGT+TGG - chr7.3:31072011-31072030 MS.gene27516:intron 55.0%
!! TTGGCCTGATGGTGTTGGCT+TGG - chr7.3:31072016-31072035 MS.gene27516:intron 55.0%
ACCCACCCAAATTGGCACCG+GGG + chr7.3:31072085-31072104 None:intergenic 60.0%
CACCATCAGGCCAACCGAAG+TGG + chr7.3:31072010-31072029 None:intergenic 60.0%
GATGTCGACAGGGATGGGAG+TGG - chr7.3:31070964-31070983 MS.gene27516:intron 60.0%
! TCCCCGGTGCCAATTTGGGT+GGG - chr7.3:31072081-31072100 MS.gene27516:intron 60.0%
!! ACCCACTTCGGTTGGCCTGA+TGG - chr7.3:31072005-31072024 MS.gene27516:intron 60.0%
!! CTGCCATATGGTAGCGGGGA+AGG - chr7.3:31072156-31072175 MS.gene27516:intron 60.0%
! CTCCCCGGTGCCAATTTGGG+TGG - chr7.3:31072080-31072099 MS.gene27516:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 31069960 31072946 31069960 ID=MS.gene27516
chr7.3 mRNA 31069960 31072946 31069960 ID=MS.gene27516.t1;Parent=MS.gene27516
chr7.3 exon 31072944 31072946 31072944 ID=MS.gene27516.t1.exon1;Parent=MS.gene27516.t1
chr7.3 CDS 31072944 31072946 31072944 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
chr7.3 exon 31072660 31072786 31072660 ID=MS.gene27516.t1.exon2;Parent=MS.gene27516.t1
chr7.3 CDS 31072660 31072786 31072660 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
chr7.3 exon 31072530 31072566 31072530 ID=MS.gene27516.t1.exon3;Parent=MS.gene27516.t1
chr7.3 CDS 31072530 31072566 31072530 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
chr7.3 exon 31072413 31072440 31072413 ID=MS.gene27516.t1.exon4;Parent=MS.gene27516.t1
chr7.3 CDS 31072413 31072440 31072413 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
chr7.3 exon 31071811 31071963 31071811 ID=MS.gene27516.t1.exon5;Parent=MS.gene27516.t1
chr7.3 CDS 31071811 31071963 31071811 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
chr7.3 exon 31071621 31071723 31071621 ID=MS.gene27516.t1.exon6;Parent=MS.gene27516.t1
chr7.3 CDS 31071621 31071723 31071621 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
chr7.3 exon 31069960 31070024 31069960 ID=MS.gene27516.t1.exon7;Parent=MS.gene27516.t1
chr7.3 CDS 31069960 31070024 31069960 ID=cds.MS.gene27516.t1;Parent=MS.gene27516.t1
Gene Sequence

>MS.gene27516

ATGGTACGATCTCTCTGCTGTTCTTATTTTTCAATCAAACTAACAGATCATGATCATTAGTCATTATTATTAATTTTGCAAATTTTATCTTTAAATTTGATTGTATCATGTTAATGATTGAGATCAAGAACTATCTTTTGATGTGCAATTTTGTTATCAGTCATCTTCTATACTTAGAGGAGATTCCAGAAGATTCAACAACAAACAAAGAGGAAAACATCATTTGACGCAACAGAAGAGACAAGAGATTAAAGAAGCTTTTGAATTATTCGACACTGATGGCTCAGGTTTACACTTTACCATCAACAATAACCATGTAGTCAAAAATATTCTTGATCTCCTCTTTATACCATACTAATACTTTGTTTAATGATTTTTAGGTACTATTGATGCCAAGGAGCTTAATGTTGCTATGAGGTATTGTTGTTATTCACAAGGTTAAAATGTTTTTCATAATAATTGGGCATGTTGTTTTCATAACATACATCTTATTCTTATCTTTGTAGGGCCCTTGGATTTGAGATGACTGAAGAGGTACCCCCCTCTGCCCCTTTTTATAACCACTCGTTGCATATTATGTTGTCGCGGTAATTAATGTTTATGTTTGGGAAAGTAACAAGTACATCTTGTTATTTGATAATATCTAAGTACTTTCATTCAATTTTCATACAATTGAGCATAGTTTGCAGATTTTAATTATTTCATCCATTGACCGTTGCCAAGGAAAATAATTCCTAGTCTTTTGTGTAAATATCACGAGCAATGAAGCCAATTCCCTTTCTCTGTGATACCTCTTTTATTGTTGTAGCATTTAGCTATGGTTGTTCTTATACTAATTTAGAGATAGGGATTCAATGGCTAATGAAATTTGATTGTAGAATAGTAATAGATTATGTACAATATTGTCAGGATTTTGTGATGTTATTCTTTGTTAAAGTTTTATATGCATTCTCTCTAATAGATCATCCATTGTGTCATTTCAGCAAATTGAGCAAATGATAGCAGATGTCGACAGGGATGGGAGTGGAGCAATCGACTATGATGAATTTGAGCACATGATGACGGCCAAAATAGGAGAAAGAGACACTAAAGAGGAGCTCATGAAAGCTTTCCATATTATTGATCAAGACAAAAATGTGAATATCAGATATCTTCTCTACTATACATCATTAGTATTGCTTCTTATTGATTCTCATTGTATTTTTGTGGTCACTGTATTGTAGGGTAAGATATCGGCATCGGATATCAAGCGGATTGCAAAAGAGCTAGGTCAAAATTTTACTGATAGAGAGATTCAGGAGATGGTTGATGAAGCAGACCAAAATAGTAAGTTTCCACAAACATATCCTTGCTAGTTCTAACTTTTTAGTAAAAATTTTACATCTCACATGGCGTATTTGTATATCATTCTACGGTGAGCTGGGTGGAGATATGTGTGTTTTAGGTTATGCTAACATAGTGTATAAGAAATAATAGTATCATTGGTTTGACCTTTAAATCTGTGATTTTCTACATTGAAAGTATAGTGCGCATTGGGTCATGTTTTAGTACTCACGTAGTTTCGGACACTTATAATTTTGACATAAGAAAAAATAAATGATAAGACATTCATGTAAACATCGAAGGTATTACAACTAATGATAGTTTAATCCTGACAATAAAAATGAATCATATTAGATAAAAAGTAAACATAATGATTGGAATACTATGAACATAATTTGAGCTATAGAGAGGGAATCTGATATATGGTTGCATTGCATGGAGTATATTTTAATTAGAGTACCTTAAGGTAATATTTGCTGGTGGACTTAGATCTCCCAAAATGTCCGAAGGTAAGTTGTTAGGAACATTATTGCAATGATAAAACAAACACAGAATTTGCTTTTGAAGCAAAATAATCAAAATCCACTCCATCTTGCAAGTTACAGTAGCAAGTCCATTGTTAAAATATATTAGTTTGAAGCAAAAAATATATATATATATAATCCCTAAGGTTGATGTAGTAACTCATATTCAGAAGTTGCCTTTTAAGTTTAGCGTTCATAACCCACTTCGGTTGGCCTGATGGTGTTGGCTTGGGATCCTAGAGTGTGCTCCTCCTCTAGGTCACATGTTCGATTCTCCCCGGTGCCAATTTGGGTGGGTTAGTTTAGTTTATAAAAAAAAAAGTTTAGCGTTCCTGCTGAAGGGTATGTTCTGCCATATGGTAGCGGGGAAGGACTCTGCAGTAAATTGTTCACTACTTCCCCATAAAAAACAAAGTTAAAAGGCTGCAAACAGAGCTATAATAGATTAAAGTATAGAATAGGTTCACAGCCATATCACCTGGAACTTATAATTTTTGTGTACAATACACACGATGCGTAGGACTTGGACATGCGATTTAGCTGGAAATCAAGGTAGAATAAACAATAGGGTGCTATTTGGTCGGTCAAAGGTCAGTTACAATGGCAATTTGGGAGTTAGAGGTTAATTAGCAGGTTCTGCACATTTGTATAGGCATTTTGGATTAGTAGGCAACAACTGAGTCTCTTAGTTGTGACTTGTGAGGGGAAACTGGTTTATTTGCCTTATTTTCTCTCCATTGCAGGAATAACAGTGTTCTTTCTCTCTTTCCCCCATACACTTTCCCTGCTTGTACTACTTGTTATGTCCTGTGGTTTTTCTGGTTCCTATGATTACAATAGGTTCCTGAATTGTATATCCCATAAAACATTTATTGAAAAATGAGTAGTTTGTCAGTTTGAAATTAAACGGGGGGTTTGCATTGGTTTCATAAAAATTCTTAAGGGGAGTTCAACGTGTTATAGTTATACCATACTCTTTTTGTGTGTTGAATTTTTTCTTGCGTTAGGATTGGTAATATCTTCCCATGTTTGTGAGATATTATTTAGACAACATTTGTTGTTTTATAATATGCAGATGATCGAGAGGTTGATCCAGAGGAGTTCATCATGATGATGAACACAACAGGCTACCGTCACTAG

Protein sequence

>MS.gene27516.t1

MSSSILRGDSRRFNNKQRGKHHLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMIADVDRDGSGAIDYDEFEHMMTAKIGERDTKEELMKAFHIIDQDKNGKISASDIKRIAKELGQNFTDREIQEMVDEADQNNDREVDPEEFIMMMNTTGYRH