AlfalfaGEDB | MS.gene026530

M. sativa cultivar XinJiangDaYe / MS.gene026530

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026530.t1	XP_013466550.1	98	198	4	0	1	198	1	198	1.90E-84	322

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026530.t1	Q9FYK2	54.3	175	76	2	10	183	4	175	1.6e-39	164.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026530.t1	G8A011	98.0	198	4	0	1	198	1	198	1.4e-84	322.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene026530	MS.gene057167	PPI
MS.gene58860	MS.gene026530	PPI
MS.gene026530	MS.gene93763	PPI
MS.gene026530	MS.gene49270	PPI
MS.gene026530	MS.gene036930	PPI
MS.gene026530	MS.gene026618	PPI
MS.gene026530	MS.gene29794	PPI
MS.gene026530	MS.gene71511	PPI
MS.gene026530	MS.gene033361	PPI
MS.gene026530	MS.gene35562	PPI
MS.gene026530	MS.gene92789	PPI
MS.gene026530	MS.gene060446	PPI
MS.gene026530	MS.gene013748	PPI
MS.gene026530	MS.gene29793	PPI
MS.gene026530	MS.gene98294	PPI
MS.gene026530	MS.gene05284	PPI
MS.gene026530	MS.gene061261	PPI
MS.gene026530	MS.gene03228	PPI
MS.gene026530	MS.gene46237	PPI
MS.gene026530	MS.gene036915	PPI
MS.gene026530	MS.gene040331	PPI
MS.gene026530	MS.gene27529	PPI
MS.gene026530	MS.gene022455	PPI
MS.gene026530	MS.gene63000	PPI
MS.gene026530	MS.gene92775	PPI
MS.gene026530	MS.gene74452	PPI
MS.gene026530	MS.gene49271	PPI
MS.gene026530	MS.gene65954	PPI
MS.gene026530	MS.gene022456	PPI
MS.gene026530	MS.gene55496	PPI
MS.gene026530	MS.gene94551	PPI
MS.gene026530	MS.gene62540	PPI
MS.gene026530	MS.gene046988	PPI
MS.gene026530	MS.gene074100	PPI
MS.gene026530	MS.gene02545	PPI
MS.gene026530	MS.gene54637	PPI
MS.gene026530	MS.gene58906	PPI
MS.gene026530	MS.gene35563	PPI
MS.gene026530	MS.gene79028	PPI
MS.gene026530	MS.gene016268	PPI
MS.gene026530	MS.gene026940	PPI
MS.gene026530	MS.gene98295	PPI
MS.gene026530	MS.gene041795	PPI
MS.gene026530	MS.gene87673	PPI
MS.gene026530	MS.gene27516	PPI
MS.gene026530	MS.gene040127	PPI
MS.gene026530	MS.gene011400	PPI
MS.gene026530	MS.gene47134	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026530.t1	MTR_1g032070	97.980	198	4	0	1	198	1	198	2.55e-140	389
MS.gene026530.t1	MTR_8g105230	74.648	142	36	0	36	177	26	167	1.54e-72	218
MS.gene026530.t1	MTR_3g067610	53.676	136	59	1	45	180	4	135	2.27e-45	147
MS.gene026530.t1	MTR_5g079340	51.471	136	65	1	45	180	3	137	4.50e-42	139
MS.gene026530.t1	MTR_1g046950	47.101	138	71	1	45	180	3	140	3.10e-39	131
MS.gene026530.t1	MTR_1g076650	49.265	136	69	0	46	181	12	147	9.06e-38	128
MS.gene026530.t1	MTR_1g076650	41.935	62	36	0	45	106	84	145	2.93e-11	59.3
MS.gene026530.t1	MTR_1g047100	45.255	137	74	1	45	180	3	139	1.77e-37	127
MS.gene026530.t1	MTR_6g025320	48.276	145	71	1	42	182	4	148	6.20e-37	125
MS.gene026530.t1	MTR_6g025320	44.304	79	44	0	28	106	67	145	1.51e-15	70.9
MS.gene026530.t1	MTR_5g088320	48.905	137	70	0	46	182	12	148	6.90e-37	125
MS.gene026530.t1	MTR_5g088320	44.304	79	44	0	28	106	67	145	1.60e-15	70.9
MS.gene026530.t1	MTR_5g088320	49.254	67	34	0	114	180	7	73	2.93e-12	62.0
MS.gene026530.t1	MTR_7g087610	47.586	145	72	1	42	182	4	148	7.29e-37	125
MS.gene026530.t1	MTR_7g087610	43.038	79	45	0	28	106	67	145	5.70e-15	69.3
MS.gene026530.t1	MTR_8g107110	49.265	136	68	1	45	180	23	157	9.65e-37	126
MS.gene026530.t1	MTR_1g041285	49.265	136	69	0	46	181	12	147	5.34e-36	123
MS.gene026530.t1	MTR_1g041285	42.857	77	44	0	30	106	69	145	1.16e-14	68.6
MS.gene026530.t1	MTR_3g083470	47.059	153	66	3	46	198	93	230	3.73e-35	124
MS.gene026530.t1	MTR_7g075040	44.586	157	76	5	35	180	34	190	2.22e-34	120
MS.gene026530.t1	MTR_6g079570	47.857	140	69	3	45	182	25	162	1.94e-33	117
MS.gene026530.t1	MTR_8g036075	38.043	184	104	4	5	180	10	191	7.55e-33	117
MS.gene026530.t1	MTR_4g086260	37.079	178	102	2	6	183	25	192	1.77e-32	116
MS.gene026530.t1	MTR_4g086260	39.394	66	40	0	46	111	128	193	2.19e-11	60.8
MS.gene026530.t1	MTR_5g017550	40.678	177	96	5	12	181	8	182	6.38e-32	114
MS.gene026530.t1	MTR_4g067270	42.069	145	82	1	46	188	5	149	7.86e-32	113
MS.gene026530.t1	MTR_7g090450	43.972	141	72	4	46	180	73	212	5.40e-31	112
MS.gene026530.t1	MTR_5g017510	39.665	179	96	6	12	181	8	183	9.95e-31	111
MS.gene026530.t1	MTR_5g017560	39.665	179	96	6	12	181	8	183	9.95e-31	111
MS.gene026530.t1	MTR_0168s0120	50.442	113	56	0	71	183	1	113	5.46e-29	104
MS.gene026530.t1	MTR_0168s0120	44.304	79	44	0	28	106	31	109	6.62e-16	70.9
MS.gene026530.t1	MTR_6g025320	50.442	113	56	0	71	183	1	113	5.46e-29	104
MS.gene026530.t1	MTR_6g025320	44.304	79	44	0	28	106	31	109	6.62e-16	70.9
MS.gene026530.t1	MTR_7g089760	42.361	144	81	1	46	187	5	148	4.34e-28	103
MS.gene026530.t1	MTR_2g098890	34.409	186	113	3	7	188	30	210	1.08e-27	104
MS.gene026530.t1	MTR_5g027000	38.168	131	81	0	47	177	23	153	2.31e-26	99.4
MS.gene026530.t1	MTR_8g066630	37.063	143	87	1	46	185	17	159	1.62e-25	97.1
MS.gene026530.t1	MTR_8g066630	43.836	73	40	1	37	108	83	155	3.02e-12	62.4
MS.gene026530.t1	MTR_1g071150	43.182	132	72	2	51	181	17	146	1.82e-25	96.7
MS.gene026530.t1	MTR_1g071150	44.286	70	39	0	37	106	75	144	4.03e-14	67.0
MS.gene026530.t1	MTR_5g008705	39.370	127	77	0	54	180	2	128	2.68e-25	95.5
MS.gene026530.t1	MTR_3g089090	38.060	134	82	1	47	180	6	138	4.15e-25	95.5
MS.gene026530.t1	MTR_3g089070	38.060	134	82	1	47	180	7	139	4.40e-25	95.5
MS.gene026530.t1	MTR_4g115170	37.222	180	93	4	21	180	37	216	7.21e-25	97.1
MS.gene026530.t1	MTR_6g023460	38.346	133	81	1	49	181	11	142	8.75e-25	94.7
MS.gene026530.t1	MTR_5g008695	40.179	112	65	1	70	179	1	112	1.99e-24	92.8
MS.gene026530.t1	MTR_7g074020	36.111	144	92	0	42	185	26	169	6.47e-23	90.5
MS.gene026530.t1	MTR_4g103630	39.259	135	81	1	46	180	6	139	6.94e-23	89.7
MS.gene026530.t1	MTR_4g103655	39.259	135	81	1	46	180	6	139	1.50e-22	89.0
MS.gene026530.t1	MTR_6g007613	36.111	144	92	0	42	185	25	168	1.68e-22	89.7
MS.gene026530.t1	MTR_4g103650	39.259	135	81	1	46	180	2	135	3.08e-22	87.8
MS.gene026530.t1	MTR_8g078270	38.849	139	75	3	47	180	54	187	8.52e-22	88.2
MS.gene026530.t1	MTR_4g112460	32.903	155	99	2	47	196	12	166	1.09e-21	87.4
MS.gene026530.t1	MTR_4g112460	47.692	65	34	0	45	109	85	149	2.48e-12	62.8
MS.gene026530.t1	MTR_7g115040	39.850	133	80	0	49	181	15	147	2.48e-21	85.9
MS.gene026530.t1	MTR_8g069915	32.374	139	92	1	47	183	13	151	1.04e-19	82.4
MS.gene026530.t1	MTR_8g069915	44.615	65	36	0	45	109	86	150	3.54e-11	59.7
MS.gene026530.t1	MTR_7g074020	36.000	125	80	0	42	166	26	150	3.90e-19	80.5
MS.gene026530.t1	MTR_7g074020	42.857	63	36	0	118	180	29	91	5.57e-11	58.9
MS.gene026530.t1	MTR_5g011850	33.088	136	89	1	47	182	13	146	5.58e-19	79.7
MS.gene026530.t1	MTR_7g074240	34.483	174	92	4	19	180	7	170	2.43e-18	79.0
MS.gene026530.t1	MTR_6g007613	35.200	125	81	0	42	166	25	149	2.60e-18	78.2
MS.gene026530.t1	MTR_6g007613	42.857	63	36	0	118	180	28	90	3.36e-11	59.3
MS.gene026530.t1	MTR_1g030440	34.459	148	81	3	44	181	20	161	4.13e-17	75.5
MS.gene026530.t1	MTR_5g009830	35.714	140	84	3	47	184	372	507	2.21e-16	77.0
MS.gene026530.t1	MTR_3g088655	35.135	148	84	4	46	181	8	155	3.43e-16	72.8
MS.gene026530.t1	MTR_4g132070	35.294	136	82	3	47	180	397	528	4.44e-15	73.2
MS.gene026530.t1	MTR_8g099095	33.571	140	87	3	47	184	372	507	7.75e-15	72.4
MS.gene026530.t1	MTR_1g026190	34.058	138	81	4	47	180	388	519	1.25e-14	72.0
MS.gene026530.t1	MTR_5g079470	49.231	65	32	1	42	106	6	69	9.01e-14	64.3
MS.gene026530.t1	MTR_5g092810	35.507	138	83	3	45	180	396	529	1.39e-13	68.9
MS.gene026530.t1	MTR_3g098090	33.562	146	92	3	47	191	338	479	3.37e-13	67.8
MS.gene026530.t1	MTR_3g051770	33.333	144	89	3	47	184	389	531	4.39e-13	67.4
MS.gene026530.t1	MTR_3g098070	33.562	146	92	3	47	191	335	476	4.56e-13	67.4
MS.gene026530.t1	MTR_7g068710	34.437	151	91	5	44	190	359	505	5.03e-13	67.0
MS.gene026530.t1	MTR_8g095440	33.562	146	92	3	47	191	336	477	5.24e-13	67.0
MS.gene026530.t1	MTR_4g082050	48.571	70	35	1	117	186	75	143	2.27e-12	62.4
MS.gene026530.t1	MTR_4g132040	31.618	136	87	3	47	180	401	532	3.12e-12	64.7
MS.gene026530.t1	MTR_0028s0170	32.143	140	89	3	47	184	384	519	5.23e-12	64.3
MS.gene026530.t1	MTR_3g083460	37.931	87	45	3	104	181	1	87	6.29e-12	59.7
MS.gene026530.t1	MTR_1g041150	32.374	139	91	2	47	185	424	559	6.92e-12	63.9
MS.gene026530.t1	MTR_3g055570	32.075	159	90	4	25	182	33	174	9.69e-12	61.2
MS.gene026530.t1	MTR_5g089320	32.394	142	86	4	47	184	374	509	1.21e-11	63.2
MS.gene026530.t1	MTR_1g096490	33.088	136	84	3	47	180	336	466	1.77e-11	62.8
MS.gene026530.t1	MTR_7g011010	35.135	148	79	5	37	180	63	197	3.42e-11	60.1
MS.gene026530.t1	MTR_5g025690	37.600	125	60	5	60	180	85	195	4.84e-11	59.7
MS.gene026530.t1	MTR_4g107490	29.054	148	103	2	44	190	376	522	5.51e-11	61.2
MS.gene026530.t1	MTR_7g106710	31.429	140	89	3	47	184	441	575	6.25e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026530.t1	AT1G24620	62.286	175	62	2	10	183	4	175	3.75e-69	209
MS.gene026530.t1	AT1G66400	51.799	139	65	1	45	181	14	152	2.75e-45	147
MS.gene026530.t1	AT1G18210	52.206	136	61	1	45	180	22	153	3.00e-41	137
MS.gene026530.t1	AT1G18210	52.206	136	61	1	45	180	22	153	3.00e-41	137
MS.gene026530.t1	AT1G73630	50.370	135	63	1	46	180	20	150	3.05e-39	132
MS.gene026530.t1	AT5G37770	45.098	153	80	1	32	180	3	155	6.57e-39	131
MS.gene026530.t1	AT5G37770	45.098	153	80	1	32	180	3	155	6.57e-39	131
MS.gene026530.t1	AT2G27030	47.651	149	74	1	42	186	4	152	1.01e-37	129
MS.gene026530.t1	AT2G27030	43.038	79	45	0	28	106	67	145	7.19e-15	69.7
MS.gene026530.t1	AT5G37780	49.635	137	69	0	46	182	12	148	1.03e-37	128
MS.gene026530.t1	AT5G37780	43.038	79	45	0	28	106	67	145	4.55e-15	69.7
MS.gene026530.t1	AT5G37780	49.254	67	34	0	114	180	7	73	3.30e-12	62.0
MS.gene026530.t1	AT1G66410	49.635	137	69	0	46	182	12	148	1.03e-37	128
MS.gene026530.t1	AT1G66410	43.038	79	45	0	28	106	67	145	4.55e-15	69.7
MS.gene026530.t1	AT1G66410	49.254	67	34	0	114	180	7	73	3.30e-12	62.0
MS.gene026530.t1	AT5G21274	48.966	145	70	1	42	182	4	148	2.58e-37	127
MS.gene026530.t1	AT5G21274	43.038	79	45	0	28	106	67	145	5.16e-15	69.3
MS.gene026530.t1	AT3G56800	48.276	145	71	1	42	182	4	148	5.11e-37	126
MS.gene026530.t1	AT3G56800	43.038	79	45	0	28	106	67	145	4.95e-15	69.3
MS.gene026530.t1	AT2G27030	48.276	145	71	1	42	182	4	148	5.11e-37	126
MS.gene026530.t1	AT2G27030	43.038	79	45	0	28	106	67	145	4.95e-15	69.3
MS.gene026530.t1	AT2G41110	48.276	145	71	1	42	182	4	148	5.11e-37	126
MS.gene026530.t1	AT2G41110	43.038	79	45	0	28	106	67	145	4.95e-15	69.3
MS.gene026530.t1	AT3G43810	48.276	145	71	1	42	182	4	148	6.49e-37	125
MS.gene026530.t1	AT3G43810	44.304	79	44	0	28	106	67	145	1.58e-15	70.9
MS.gene026530.t1	AT3G43810	47.619	147	73	1	42	184	4	150	1.68e-36	127
MS.gene026530.t1	AT3G43810	44.304	79	44	0	28	106	67	145	7.01e-15	70.5
MS.gene026530.t1	AT5G37780	50.806	124	61	0	60	183	13	136	8.20e-34	117
MS.gene026530.t1	AT5G37780	43.038	79	45	0	28	106	54	132	4.51e-15	69.3
MS.gene026530.t1	AT1G66410	51.220	123	60	0	60	182	36	158	1.03e-33	118
MS.gene026530.t1	AT1G66410	43.038	79	45	0	28	106	77	155	5.76e-15	69.7
MS.gene026530.t1	AT5G37780	51.220	123	60	0	60	182	52	174	1.34e-33	118
MS.gene026530.t1	AT5G37780	43.038	79	45	0	28	106	93	171	1.01e-14	69.3
MS.gene026530.t1	AT5G37780	51.220	123	60	0	60	182	41	163	1.71e-33	117
MS.gene026530.t1	AT5G37780	43.038	79	45	0	28	106	82	160	7.24e-15	69.3
MS.gene026530.t1	AT2G41110	44.586	157	71	2	42	182	4	160	1.89e-33	117
MS.gene026530.t1	AT2G41110	43.038	79	45	0	28	106	79	157	1.12e-14	68.9
MS.gene026530.t1	AT3G22930	44.118	136	76	0	46	181	35	170	5.05e-33	117
MS.gene026530.t1	AT3G22930	46.774	62	33	0	45	106	107	168	8.11e-13	64.3
MS.gene026530.t1	AT4G14640	43.357	143	80	1	39	181	7	148	9.97e-33	115
MS.gene026530.t1	AT2G15680	39.716	141	79	2	46	184	50	186	4.23e-32	114
MS.gene026530.t1	AT2G15680	47.619	63	33	0	44	106	119	181	7.10e-15	70.1
MS.gene026530.t1	AT5G17470	41.429	140	80	1	47	184	3	142	8.27e-31	110
MS.gene026530.t1	AT3G10190	38.462	169	97	4	14	180	42	205	1.10e-30	112
MS.gene026530.t1	AT3G07490	40.690	145	84	1	46	188	5	149	5.13e-30	108
MS.gene026530.t1	AT1G66410	51.327	113	55	0	71	183	1	113	7.99e-30	106
MS.gene026530.t1	AT1G66410	43.038	79	45	0	28	106	31	109	1.82e-15	69.7
MS.gene026530.t1	AT1G66410	51.327	113	55	0	71	183	1	113	7.99e-30	106
MS.gene026530.t1	AT1G66410	43.038	79	45	0	28	106	31	109	1.82e-15	69.7
MS.gene026530.t1	AT2G43290	42.282	149	79	2	46	187	65	213	9.94e-30	109
MS.gene026530.t1	AT4G12860	42.069	145	82	1	46	188	5	149	3.43e-29	106
MS.gene026530.t1	AT3G43810	50.442	113	56	0	71	183	1	113	5.72e-29	104
MS.gene026530.t1	AT3G43810	44.304	79	44	0	28	106	31	109	6.94e-16	70.9
MS.gene026530.t1	AT3G43810	50.442	113	56	0	71	183	1	113	5.72e-29	104
MS.gene026530.t1	AT3G43810	44.304	79	44	0	28	106	31	109	6.94e-16	70.9
MS.gene026530.t1	AT4G14640	44.262	122	68	0	60	181	9	130	6.21e-29	105
MS.gene026530.t1	AT4G14640	45.161	62	34	0	45	106	67	128	6.10e-13	63.5
MS.gene026530.t1	AT1G05990	42.466	146	81	2	46	188	5	150	2.07e-28	104
MS.gene026530.t1	AT3G59440	37.853	177	102	3	11	185	21	191	2.09e-27	103
MS.gene026530.t1	AT3G50360	35.616	146	94	0	41	186	22	167	3.26e-27	101
MS.gene026530.t1	AT2G41090	41.892	148	82	2	39	186	6	149	3.48e-27	102
MS.gene026530.t1	AT2G41410	36.306	157	97	3	28	181	52	208	6.35e-27	102
MS.gene026530.t1	AT2G41100	41.509	159	73	3	42	182	63	219	1.22e-26	103
MS.gene026530.t1	AT2G41100	36.220	127	65	2	70	180	1	127	4.78e-16	74.7
MS.gene026530.t1	AT2G41100	41.509	159	73	3	42	182	63	219	1.22e-26	103
MS.gene026530.t1	AT2G41100	36.220	127	65	2	70	180	1	127	4.78e-16	74.7
MS.gene026530.t1	AT2G41100	41.509	159	73	3	42	182	63	219	1.22e-26	103
MS.gene026530.t1	AT2G41100	36.220	127	65	2	70	180	1	127	4.78e-16	74.7
MS.gene026530.t1	AT3G50770	38.255	149	87	3	37	180	55	203	2.02e-26	100
MS.gene026530.t1	AT2G41100	41.509	159	73	3	42	182	98	254	2.04e-26	103
MS.gene026530.t1	AT2G41100	40.000	155	76	3	42	180	9	162	4.39e-25	99.8
MS.gene026530.t1	AT2G41100	41.509	159	73	3	42	182	98	254	2.04e-26	103
MS.gene026530.t1	AT2G41100	40.000	155	76	3	42	180	9	162	4.39e-25	99.8
MS.gene026530.t1	AT4G03290	40.816	147	82	2	46	187	5	151	3.98e-26	98.6
MS.gene026530.t1	AT1G32250	35.616	146	88	2	46	185	16	161	2.49e-24	94.4
MS.gene026530.t1	AT1G32250	49.153	59	30	0	45	103	94	152	9.47e-12	61.2
MS.gene026530.t1	AT3G03400	37.209	129	79	1	47	173	6	134	1.32e-23	91.7
MS.gene026530.t1	AT5G42380	36.765	136	85	1	46	180	49	184	2.85e-22	89.4
MS.gene026530.t1	AT2G36180	36.806	144	81	3	47	184	1	140	1.41e-21	86.7
MS.gene026530.t1	AT4G37010	31.724	145	99	0	42	186	23	167	8.20e-21	85.1
MS.gene026530.t1	AT4G37010	31.724	145	99	0	42	186	27	171	8.82e-21	85.1
MS.gene026530.t1	AT3G25600	32.374	139	92	1	47	183	13	151	1.91e-20	84.0
MS.gene026530.t1	AT3G22930	44.211	95	53	0	46	140	35	129	9.64e-20	81.3
MS.gene026530.t1	AT3G03000	37.589	141	87	1	46	185	20	160	3.00e-19	80.9
MS.gene026530.t1	AT3G03000	44.286	70	38	1	40	108	87	156	6.11e-13	64.3
MS.gene026530.t1	AT4G14640	42.308	104	59	1	39	142	7	109	3.01e-19	79.7
MS.gene026530.t1	AT1G18530	31.655	139	93	1	47	183	8	146	3.57e-19	80.5
MS.gene026530.t1	AT1G18530	43.939	66	37	0	44	109	80	145	7.16e-12	61.2
MS.gene026530.t1	AT2G41100	39.231	130	60	2	71	182	1	129	9.13e-19	80.5
MS.gene026530.t1	AT2G41100	49.254	67	30	1	42	104	58	124	4.66e-12	62.8
MS.gene026530.t1	AT1G76650	34.815	135	87	1	46	180	43	176	5.65e-18	77.8
MS.gene026530.t1	AT1G76650	34.815	135	87	1	46	180	43	176	5.65e-18	77.8
MS.gene026530.t1	AT3G51920	31.206	141	97	0	45	185	11	151	7.04e-18	77.0
MS.gene026530.t1	AT3G51920	43.836	73	38	1	31	103	73	142	4.62e-11	58.9
MS.gene026530.t1	AT3G03410	32.593	135	82	1	48	182	4	129	8.29e-18	76.3
MS.gene026530.t1	AT3G03410	47.692	65	34	0	47	111	67	131	5.94e-11	58.2
MS.gene026530.t1	AT1G62820	32.353	136	90	1	47	182	14	147	5.26e-17	74.7
MS.gene026530.t1	AT1G76640	32.117	137	91	1	46	180	22	158	1.24e-16	73.9
MS.gene026530.t1	AT1G12310	31.618	136	91	1	47	182	14	147	7.55e-16	71.6
MS.gene026530.t1	AT1G21550	34.416	154	77	6	44	181	8	153	7.69e-16	71.6
MS.gene026530.t1	AT3G20410	34.507	142	83	4	47	184	397	532	2.53e-15	73.9
MS.gene026530.t1	AT3G20410	34.507	142	83	4	47	184	397	532	2.53e-15	73.9
MS.gene026530.t1	AT3G03430	49.254	67	31	2	44	108	5	70	3.05e-15	68.2
MS.gene026530.t1	AT4G23650	35.714	140	84	3	47	184	384	519	3.96e-15	73.2
MS.gene026530.t1	AT4G20780	33.766	154	82	3	47	180	30	183	4.27e-15	70.5
MS.gene026530.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.44e-14	71.6
MS.gene026530.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.44e-14	71.6
MS.gene026530.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.44e-14	71.6
MS.gene026530.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.44e-14	71.6
MS.gene026530.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.44e-14	71.6
MS.gene026530.t1	AT4G04740	34.559	136	83	3	47	180	374	505	1.44e-14	71.6
MS.gene026530.t1	AT4G21940	34.783	138	80	4	47	180	407	538	1.67e-14	71.6
MS.gene026530.t1	AT4G21940	34.783	138	80	4	47	180	407	538	2.01e-14	71.2
MS.gene026530.t1	AT4G04720	34.783	138	80	4	47	180	385	516	2.01e-14	71.2
MS.gene026530.t1	AT4G04720	34.783	138	80	4	47	180	385	516	2.01e-14	71.2
MS.gene026530.t1	AT4G04695	33.333	138	82	4	47	180	337	468	8.77e-14	69.3
MS.gene026530.t1	AT1G76650	32.593	135	80	2	46	180	43	166	1.05e-13	66.2
MS.gene026530.t1	AT1G76040	35.294	136	82	3	47	180	417	548	1.07e-13	69.3
MS.gene026530.t1	AT1G76040	35.294	136	82	3	47	180	179	310	1.08e-13	68.6
MS.gene026530.t1	AT1G76040	35.294	136	82	3	47	180	179	310	1.08e-13	68.6
MS.gene026530.t1	AT5G23580	35.821	134	83	2	47	180	328	458	1.20e-13	68.9
MS.gene026530.t1	AT1G50700	32.394	142	86	4	47	184	379	514	1.41e-13	68.9
MS.gene026530.t1	AT1G61950	36.029	136	81	3	47	180	405	536	2.08e-13	68.6
MS.gene026530.t1	AT4G04700	33.333	138	82	4	47	180	337	468	2.97e-13	67.8
MS.gene026530.t1	AT5G19360	34.058	138	89	2	47	184	374	509	4.68e-13	67.4
MS.gene026530.t1	AT2G41860	29.268	164	114	2	33	195	346	508	9.24e-13	66.6
MS.gene026530.t1	AT2G41860	29.268	164	114	2	33	195	346	508	9.33e-13	66.6
MS.gene026530.t1	AT3G51850	31.333	150	97	3	44	190	357	503	1.36e-12	65.9
MS.gene026530.t1	AT2G41100	53.968	63	28	1	42	104	9	70	1.47e-12	62.8
MS.gene026530.t1	AT3G10660	33.333	141	90	3	47	186	492	629	1.50e-12	65.9
MS.gene026530.t1	AT3G10660	33.333	141	90	3	47	186	492	629	1.50e-12	65.9
MS.gene026530.t1	AT5G44460	32.258	186	93	5	10	180	7	174	1.75e-12	63.5
MS.gene026530.t1	AT4G09570	35.075	134	84	3	47	180	331	461	2.16e-12	65.5
MS.gene026530.t1	AT5G12180	33.333	138	90	2	47	184	379	514	2.48e-12	65.1
MS.gene026530.t1	AT2G17290	33.103	145	94	2	47	191	391	532	3.36e-12	64.7
MS.gene026530.t1	AT2G17290	33.103	145	94	2	47	191	391	532	3.36e-12	64.7
MS.gene026530.t1	AT5G17480	46.154	65	32	2	44	106	5	68	3.44e-12	60.1
MS.gene026530.t1	AT1G35670	34.328	134	85	3	47	180	332	462	3.48e-12	64.7
MS.gene026530.t1	AT5G12480	29.448	163	106	4	33	190	257	415	3.95e-12	64.7
MS.gene026530.t1	AT5G12480	29.448	163	106	4	33	190	351	509	5.80e-12	64.3
MS.gene026530.t1	AT3G57530	32.867	143	89	4	51	190	373	511	3.39e-11	62.0
MS.gene026530.t1	AT4G35310	32.414	145	95	2	47	191	403	544	5.50e-11	61.2
MS.gene026530.t1	AT4G35310	32.414	145	95	2	47	191	403	544	5.50e-11	61.2

Find 56 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATTGATCCCAATGAGATTT+TGG	0.129541	1.1:-17351793	MS.gene026530:CDS
AAAATCTCTTCTTCCGAATT+AGG	0.141217	1.1:-17351942	MS.gene026530:CDS
TGTCCAATTCACCGAGGATT+TGG	0.294496	1.1:-17352003	MS.gene026530:CDS
TCAAGTTCTTCTTCCGTTGC+TGG	0.301646	1.1:+17351894	None:intergenic
TTTCGGAAATTTGATGTTAA+TGG	0.305139	1.1:-17351972	MS.gene026530:CDS
CTCATTGGGATCAATGTCTT+TGG	0.318096	1.1:+17351800	None:intergenic
AGGATTTGGAGCACGTGTTT+CGG	0.338456	1.1:-17351989	MS.gene026530:CDS
AGAGAGAAAGGTTGGGTTTG+TGG	0.351555	1.1:+17352049	None:intergenic
GAGATTCTCCAAAATCTCAT+TGG	0.356080	1.1:+17351785	None:intergenic
GCTCCAAATCCTCGGTGAAT+TGG	0.365616	1.1:+17352000	None:intergenic
GAGAAGACGATGTTGTGTTT+TGG	0.372878	1.1:+17352084	None:intergenic
ATGATGATGGGCTCCAACTT+TGG	0.384568	1.1:-17351588	MS.gene026530:CDS
TCCCATGATGGAACCTAATT+CGG	0.387444	1.1:+17351929	None:intergenic
CGGTGAATTGGACACGTGAT+TGG	0.404315	1.1:+17352012	None:intergenic
CGAGGAGTTGCACAATGTTA+TGG	0.413764	1.1:-17351712	MS.gene026530:CDS
AGATTCTCCAAAATCTCATT+GGG	0.421651	1.1:+17351786	None:intergenic
CTTCCGTTGCTGGTTGCCCT+AGG	0.435720	1.1:+17351904	None:intergenic
GGGTTTGTGGTATCCCTTGT+TGG	0.461157	1.1:+17352062	None:intergenic
AGAGTTTAAGAAGATGATGA+TGG	0.472134	1.1:-17351601	MS.gene026530:CDS
CACAATGTTATGGTGAGTCT+TGG	0.485493	1.1:-17351702	MS.gene026530:CDS
AAATTTGATGTTAATGGTGA+TGG	0.490180	1.1:-17351966	MS.gene026530:CDS
TTGCCCTAGGCTTCCCATGA+TGG	0.497103	1.1:+17351917	None:intergenic
GTGGTTCGAGAGAGAAAGGT+TGG	0.499037	1.1:+17352041	None:intergenic
TCTTTCCATCGATCCAAAGT+TGG	0.502885	1.1:+17351575	None:intergenic
GCCGAGTGTCAAAAGATGAT+AGG	0.504864	1.1:-17351663	MS.gene026530:CDS
GGACGTGGTTCGAGAGAGAA+AGG	0.508612	1.1:+17352037	None:intergenic
TTCCGAATTAGGTTCCATCA+TGG	0.510159	1.1:-17351931	MS.gene026530:CDS
GGTTCCATCATGGGAAGCCT+AGG	0.511678	1.1:-17351921	MS.gene026530:CDS
AAGCCTAGGGCAACCAGCAA+CGG	0.512937	1.1:-17351907	MS.gene026530:CDS
GTTTCTTCTTTCGATGGAAG+AGG	0.513153	1.1:+17352108	None:intergenic
TTTGGAGTTTCTTCTTTCGA+TGG	0.517051	1.1:+17352102	None:intergenic
TCTTTCGATGGAAGAGGGAT+CGG	0.518598	1.1:+17352114	None:intergenic
GGGCTCCAACTTTGGATCGA+TGG	0.532367	1.1:-17351580	MS.gene026530:CDS
TCCGAATTAGGTTCCATCAT+GGG	0.541114	1.1:-17351930	MS.gene026530:CDS
TGGTTCGAGAGAGAAAGGTT+GGG	0.546336	1.1:+17352042	None:intergenic
AACATCGTCTTCTCCAACAA+GGG	0.555947	1.1:-17352075	MS.gene026530:CDS
CATAACATTGTGCAACTCCT+CGG	0.559869	1.1:+17351713	None:intergenic
TTTCTTCTTTCGATGGAAGA+GGG	0.564860	1.1:+17352109	None:intergenic
TGAATTGGACACGTGATTGG+AGG	0.572502	1.1:+17352015	None:intergenic
AAATGGTTCTATATCGGCCG+AGG	0.580978	1.1:-17351730	MS.gene026530:CDS
GAATTGGACACGTGATTGGA+GGG	0.581505	1.1:+17352016	None:intergenic
GAGGTTGATGCTGATGGTGA+TGG	0.586778	1.1:-17351858	MS.gene026530:CDS
CAACATCGTCTTCTCCAACA+AGG	0.587596	1.1:-17352076	MS.gene026530:CDS
GGCGTTGATAGCGACGGTGA+TGG	0.588528	1.1:-17351639	MS.gene026530:CDS
AAACACGTGCTCCAAATCCT+CGG	0.589055	1.1:+17351992	None:intergenic
CACCATCAGCATCAACCTCA+CGG	0.592925	1.1:+17351862	None:intergenic
ATCCGTGAGGTTGATGCTGA+TGG	0.593506	1.1:-17351864	MS.gene026530:CDS
GAGTTTAAGAAGATGATGAT+GGG	0.596390	1.1:-17351600	MS.gene026530:CDS
GACACGTGATTGGAGGGACG+TGG	0.597223	1.1:+17352022	None:intergenic
GTTCCATCATGGGAAGCCTA+GGG	0.616679	1.1:-17351920	MS.gene026530:CDS
TTAACTCAATAAACTCCTCG+AGG	0.658756	1.1:+17351826	None:intergenic
GAGTGTCAAAAGATGATAGG+CGG	0.691494	1.1:-17351660	MS.gene026530:CDS
ATAGGCGGCGTTGATAGCGA+CGG	0.701502	1.1:-17351645	MS.gene026530:CDS
TGATGGTCACATCAACCTCG+AGG	0.737999	1.1:-17351841	MS.gene026530:CDS
ACTTGATAATATGATCCGTG+AGG	0.739585	1.1:-17351877	MS.gene026530:CDS
ATCACGTGTCCAATTCACCG+AGG	0.777691	1.1:-17352009	MS.gene026530:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTGTCAATGTCAAAAA+CGG	+	chr1.1:17351924-17351943	None:intergenic	20.0%
!	AAATTTGATGTTAATGGTGA+TGG	-	chr1.1:17351704-17351723	MS.gene026530:CDS	25.0%
!	TTTCGGAAATTTGATGTTAA+TGG	-	chr1.1:17351698-17351717	MS.gene026530:CDS	25.0%
!!	GTTTTTGACATTGACAAAAA+TGG	-	chr1.1:17351923-17351942	MS.gene026530:CDS	25.0%
!!	TGACAAAAATGGTTCTATAT+CGG	-	chr1.1:17351934-17351953	MS.gene026530:CDS	25.0%
	AAAATCTCTTCTTCCGAATT+AGG	-	chr1.1:17351728-17351747	MS.gene026530:CDS	30.0%
	AGAGTTTAAGAAGATGATGA+TGG	-	chr1.1:17352069-17352088	MS.gene026530:CDS	30.0%
	AGATTCTCCAAAATCTCATT+GGG	+	chr1.1:17351887-17351906	None:intergenic	30.0%
	GAGTTTAAGAAGATGATGAT+GGG	-	chr1.1:17352070-17352089	MS.gene026530:CDS	30.0%
	GAGATTCTCCAAAATCTCAT+TGG	+	chr1.1:17351888-17351907	None:intergenic	35.0%
	TTAACTCAATAAACTCCTCG+AGG	+	chr1.1:17351847-17351866	None:intergenic	35.0%
	TTTCTTCTTTCGATGGAAGA+GGG	+	chr1.1:17351564-17351583	None:intergenic	35.0%
!	ACTTGATAATATGATCCGTG+AGG	-	chr1.1:17351793-17351812	MS.gene026530:CDS	35.0%
!	CATTGATCCCAATGAGATTT+TGG	-	chr1.1:17351877-17351896	MS.gene026530:CDS	35.0%
!	TTTGGAGTTTCTTCTTTCGA+TGG	+	chr1.1:17351571-17351590	None:intergenic	35.0%
	AACATCGTCTTCTCCAACAA+GGG	-	chr1.1:17351595-17351614	MS.gene026530:CDS	40.0%
	CACAATGTTATGGTGAGTCT+TGG	-	chr1.1:17351968-17351987	MS.gene026530:CDS	40.0%
	CATAACATTGTGCAACTCCT+CGG	+	chr1.1:17351960-17351979	None:intergenic	40.0%
	CTCATTGGGATCAATGTCTT+TGG	+	chr1.1:17351873-17351892	None:intergenic	40.0%
	GAGTGTCAAAAGATGATAGG+CGG	-	chr1.1:17352010-17352029	MS.gene026530:CDS	40.0%
	GTTTCTTCTTTCGATGGAAG+AGG	+	chr1.1:17351565-17351584	None:intergenic	40.0%
	TCCGAATTAGGTTCCATCAT+GGG	-	chr1.1:17351740-17351759	MS.gene026530:CDS	40.0%
	TCTTTCCATCGATCCAAAGT+TGG	+	chr1.1:17352098-17352117	None:intergenic	40.0%
	TTCCGAATTAGGTTCCATCA+TGG	-	chr1.1:17351739-17351758	MS.gene026530:CDS	40.0%
!	GAGAAGACGATGTTGTGTTT+TGG	+	chr1.1:17351589-17351608	None:intergenic	40.0%
!	GCCTATCATCTTTTGACACT+CGG	+	chr1.1:17352011-17352030	None:intergenic	40.0%
!	TCCCATGATGGAACCTAATT+CGG	+	chr1.1:17351744-17351763	None:intergenic	40.0%
	AAACACGTGCTCCAAATCCT+CGG	+	chr1.1:17351681-17351700	None:intergenic	45.0%
	AGAGAGAAAGGTTGGGTTTG+TGG	+	chr1.1:17351624-17351643	None:intergenic	45.0%
	CAACATCGTCTTCTCCAACA+AGG	-	chr1.1:17351594-17351613	MS.gene026530:CDS	45.0%
	CGAGGAGTTGCACAATGTTA+TGG	-	chr1.1:17351958-17351977	MS.gene026530:CDS	45.0%
	GAATTGGACACGTGATTGGA+GGG	+	chr1.1:17351657-17351676	None:intergenic	45.0%
	GCCGAGTGTCAAAAGATGAT+AGG	-	chr1.1:17352007-17352026	MS.gene026530:CDS	45.0%
	TCAAGTTCTTCTTCCGTTGC+TGG	+	chr1.1:17351779-17351798	None:intergenic	45.0%
	TCTTTCGATGGAAGAGGGAT+CGG	+	chr1.1:17351559-17351578	None:intergenic	45.0%
	TGAATTGGACACGTGATTGG+AGG	+	chr1.1:17351658-17351677	None:intergenic	45.0%
	TGGTTCGAGAGAGAAAGGTT+GGG	+	chr1.1:17351631-17351650	None:intergenic	45.0%
	TGTCCAATTCACCGAGGATT+TGG	-	chr1.1:17351667-17351686	MS.gene026530:CDS	45.0%
!	AAATGGTTCTATATCGGCCG+AGG	-	chr1.1:17351940-17351959	MS.gene026530:CDS	45.0%
!	AGGATTTGGAGCACGTGTTT+CGG	-	chr1.1:17351681-17351700	MS.gene026530:CDS	45.0%
!!	ATGATGATGGGCTCCAACTT+TGG	-	chr1.1:17352082-17352101	MS.gene026530:CDS	45.0%
	ATCACGTGTCCAATTCACCG+AGG	-	chr1.1:17351661-17351680	MS.gene026530:CDS	50.0%
	CACCATCAGCATCAACCTCA+CGG	+	chr1.1:17351811-17351830	None:intergenic	50.0%
	CGGTGAATTGGACACGTGAT+TGG	+	chr1.1:17351661-17351680	None:intergenic	50.0%
	GCTCCAAATCCTCGGTGAAT+TGG	+	chr1.1:17351673-17351692	None:intergenic	50.0%
	GGGTTTGTGGTATCCCTTGT+TGG	+	chr1.1:17351611-17351630	None:intergenic	50.0%
	GTGGTTCGAGAGAGAAAGGT+TGG	+	chr1.1:17351632-17351651	None:intergenic	50.0%
	GTTCCATCATGGGAAGCCTA+GGG	-	chr1.1:17351750-17351769	MS.gene026530:CDS	50.0%
	TGATGGTCACATCAACCTCG+AGG	-	chr1.1:17351829-17351848	MS.gene026530:CDS	50.0%
!	CATCTTTTGACACTCGGCGA+GGG	+	chr1.1:17352005-17352024	None:intergenic	50.0%
!	TCATCTTTTGACACTCGGCG+AGG	+	chr1.1:17352006-17352025	None:intergenic	50.0%
!!	ATCCGTGAGGTTGATGCTGA+TGG	-	chr1.1:17351806-17351825	MS.gene026530:CDS	50.0%
!!	GAGGTTGATGCTGATGGTGA+TGG	-	chr1.1:17351812-17351831	MS.gene026530:CDS	50.0%
	AAGCCTAGGGCAACCAGCAA+CGG	-	chr1.1:17351763-17351782	MS.gene026530:CDS	55.0%
	GGACGTGGTTCGAGAGAGAA+AGG	+	chr1.1:17351636-17351655	None:intergenic	55.0%
	GGGCTCCAACTTTGGATCGA+TGG	-	chr1.1:17352090-17352109	MS.gene026530:CDS	55.0%
	GGTTCCATCATGGGAAGCCT+AGG	-	chr1.1:17351749-17351768	MS.gene026530:CDS	55.0%
	TTGCCCTAGGCTTCCCATGA+TGG	+	chr1.1:17351756-17351775	None:intergenic	55.0%
!!	ATAGGCGGCGTTGATAGCGA+CGG	-	chr1.1:17352025-17352044	MS.gene026530:CDS	55.0%
	GACACGTGATTGGAGGGACG+TGG	+	chr1.1:17351651-17351670	None:intergenic	60.0%
!	CTTCCGTTGCTGGTTGCCCT+AGG	+	chr1.1:17351769-17351788	None:intergenic	60.0%
!!	GGCGTTGATAGCGACGGTGA+TGG	-	chr1.1:17352031-17352050	MS.gene026530:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	17351548	17352144	17351548	ID=MS.gene026530
chr1.1	mRNA	17351548	17352144	17351548	ID=MS.gene026530.t1;Parent=MS.gene026530
chr1.1	exon	17351548	17352144	17351548	ID=MS.gene026530.t1.exon1;Parent=MS.gene026530.t1
chr1.1	CDS	17351548	17352144	17351548	ID=cds.MS.gene026530.t1;Parent=MS.gene026530.t1

Gene Sequence

>MS.gene026530

ATGGGTTTCCGATCCCTCTTCCATCGAAAGAAGAAACTCCAAAACACAACATCGTCTTCTCCAACAAGGGATACCACAAACCCAACCTTTCTCTCTCGAACCACGTCCCTCCAATCACGTGTCCAATTCACCGAGGATTTGGAGCACGTGTTTCGGAAATTTGATGTTAATGGTGATGGAAAAATCTCTTCTTCCGAATTAGGTTCCATCATGGGAAGCCTAGGGCAACCAGCAACGGAAGAAGAACTTGATAATATGATCCGTGAGGTTGATGCTGATGGTGATGGTCACATCAACCTCGAGGAGTTTATTGAGTTAAACACCAAAGACATTGATCCCAATGAGATTTTGGAGAATCTCAAAGATGCATTTTCCGTTTTTGACATTGACAAAAATGGTTCTATATCGGCCGAGGAGTTGCACAATGTTATGGTGAGTCTTGGAGATCAATGCTCCCTCGCCGAGTGTCAAAAGATGATAGGCGGCGTTGATAGCGACGGTGATGGAATGATTGATTTTGAAGAGTTTAAGAAGATGATGATGGGCTCCAACTTTGGATCGATGGAAAGAACTAATCAAGTTGATAGCGAGACATGA

Protein sequence

>MS.gene026530.t1

MGFRSLFHRKKKLQNTTSSSPTRDTTNPTFLSRTTSLQSRVQFTEDLEHVFRKFDVNGDGKISSSELGSIMGSLGQPATEEELDNMIREVDADGDGHINLEEFIELNTKDIDPNEILENLKDAFSVFDIDKNGSISAEELHNVMVSLGDQCSLAECQKMIGGVDSDGDGMIDFEEFKKMMMGSNFGSMERTNQVDSET