AlfalfaGEDB | MS.gene58906

M. sativa cultivar XinJiangDaYe / MS.gene58906

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9 PF13833.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58906.t1	XP_013452904.1	93.1	174	12	0	1	174	1	174	2.60E-85	324.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58906.t1	Q9LE22	57.0	149	59	3	15	162	11	155	2.9e-40	166.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58906.t1	A0A072UBH5	93.1	174	12	0	1	174	1	174	1.9e-85	324.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene016268	MS.gene58906	PPI
MS.gene58906	MS.gene026618	PPI
MS.gene58906	MS.gene53648	PPI
MS.gene58906	MS.gene008831	PPI
MS.gene58906	MS.gene55545	PPI
MS.gene58906	MS.gene056461	PPI
MS.gene21155	MS.gene58906	PPI
MS.gene58906	MS.gene98972	PPI
MS.gene004899	MS.gene58906	PPI
MS.gene58906	MS.gene29459	PPI
MS.gene58906	MS.gene35562	PPI
MS.gene58906	MS.gene92775	PPI
MS.gene070167	MS.gene58906	PPI
MS.gene58906	MS.gene63281	PPI
MS.gene58906	MS.gene060446	PPI
MS.gene05284	MS.gene58906	PPI
MS.gene041795	MS.gene58906	PPI
MS.gene58906	MS.gene21696	PPI
MS.gene58906	MS.gene64316	PPI
MS.gene63000	MS.gene58906	PPI
MS.gene58906	MS.gene29793	PPI
MS.gene58906	MS.gene98294	PPI
MS.gene58906	MS.gene074045	PPI
MS.gene58906	MS.gene03228	PPI
MS.gene63281	MS.gene58906	PPI
MS.gene68345	MS.gene58906	PPI
MS.gene58906	MS.gene46237	PPI
MS.gene58906	MS.gene64317	PPI
MS.gene040127	MS.gene58906	PPI
MS.gene62258	MS.gene58906	PPI
MS.gene038456	MS.gene58906	PPI
MS.gene000724	MS.gene58906	PPI
MS.gene052672	MS.gene58906	PPI
MS.gene58906	MS.gene93087	PPI
MS.gene58906	MS.gene64310	PPI
MS.gene58906	MS.gene046988	PPI
MS.gene58906	MS.gene057293	PPI
MS.gene58906	MS.gene71207	PPI
MS.gene58906	MS.gene74452	PPI
MS.gene25186	MS.gene58906	PPI
MS.gene58906	MS.gene09934	PPI
MS.gene58906	MS.gene79028	PPI
MS.gene020515	MS.gene58906	PPI
MS.gene27516	MS.gene58906	PPI
MS.gene053319	MS.gene58906	PPI
MS.gene04915	MS.gene58906	PPI
MS.gene61009	MS.gene58906	PPI
MS.gene58906	MS.gene65954	PPI
MS.gene64327	MS.gene58906	PPI
MS.gene074100	MS.gene58906	PPI
MS.gene64307	MS.gene58906	PPI
MS.gene58906	MS.gene98295	PPI
MS.gene58906	MS.gene022456	PPI
MS.gene58906	MS.gene85596	PPI
MS.gene58906	MS.gene96922	PPI
MS.gene58906	MS.gene80013	PPI
MS.gene64311	MS.gene58906	PPI
MS.gene58906	MS.gene025797	PPI
MS.gene58906	MS.gene21931	PPI
MS.gene036930	MS.gene58906	PPI
MS.gene58906	MS.gene64314	PPI
MS.gene001246	MS.gene58906	PPI
MS.gene013748	MS.gene58906	PPI
MS.gene58906	MS.gene94551	PPI
MS.gene58906	MS.gene62540	PPI
MS.gene58906	MS.gene53650	PPI
MS.gene58906	MS.gene066863	PPI
MS.gene58906	MS.gene02545	PPI
MS.gene011400	MS.gene58906	PPI
MS.gene040331	MS.gene58906	PPI
MS.gene58906	MS.gene057167	PPI
MS.gene024717	MS.gene58906	PPI
MS.gene036915	MS.gene58906	PPI
MS.gene58906	MS.gene93763	PPI
MS.gene58906	MS.gene49270	PPI
MS.gene64313	MS.gene58906	PPI
MS.gene83068	MS.gene58906	PPI
MS.gene62689	MS.gene58906	PPI
MS.gene58906	MS.gene026940	PPI
MS.gene97948	MS.gene58906	PPI
MS.gene55496	MS.gene58906	PPI
MS.gene54637	MS.gene58906	PPI
MS.gene000738	MS.gene58906	PPI
MS.gene49271	MS.gene58906	PPI
MS.gene67281	MS.gene58906	PPI
MS.gene025777	MS.gene58906	PPI
MS.gene04917	MS.gene58906	PPI
MS.gene58906	MS.gene29794	PPI
MS.gene062239	MS.gene58906	PPI
MS.gene46886	MS.gene58906	PPI
MS.gene026530	MS.gene58906	PPI
MS.gene92789	MS.gene58906	PPI
MS.gene58906	MS.gene71511	PPI
MS.gene58906	MS.gene033361	PPI
MS.gene58906	MS.gene87673	PPI
MS.gene58906	MS.gene53659	PPI
MS.gene58906	MS.gene09960	PPI
MS.gene58906	MS.gene061768	PPI
MS.gene58906	MS.gene89216	PPI
MS.gene58906	MS.gene64308	PPI
MS.gene58906	MS.gene009021	PPI
MS.gene21932	MS.gene58906	PPI
MS.gene58906	MS.gene47195	PPI
MS.gene28338	MS.gene58906	PPI
MS.gene58906	MS.gene47134	PPI
MS.gene008225	MS.gene58906	PPI
MS.gene58906	MS.gene017446	PPI
MS.gene58906	MS.gene96914	PPI
MS.gene056383	MS.gene58906	PPI
MS.gene58906	MS.gene066862	PPI
MS.gene58906	MS.gene96913	PPI
MS.gene64324	MS.gene58906	PPI
MS.gene58906	MS.gene07422	PPI
MS.gene022455	MS.gene58906	PPI
MS.gene58906	MS.gene015658	PPI
MS.gene015470	MS.gene58906	PPI
MS.gene27529	MS.gene58906	PPI
MS.gene58860	MS.gene58906	PPI
MS.gene58906	MS.gene80012	PPI
MS.gene22553	MS.gene58906	PPI
MS.gene53662	MS.gene58906	PPI
MS.gene58906	MS.gene061261	PPI
MS.gene80011	MS.gene58906	PPI
MS.gene35563	MS.gene58906	PPI
MS.gene070168	MS.gene58906	PPI
MS.gene003880	MS.gene58906	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58906.t1	MTR_6g079570	93.103	174	12	0	1	174	1	174	1.79e-118	332
MS.gene58906.t1	MTR_8g107110	72.222	144	39	1	17	160	15	157	1.06e-68	206
MS.gene58906.t1	MTR_5g079340	58.394	137	56	1	25	161	3	138	1.60e-47	151
MS.gene58906.t1	MTR_1g046950	55.000	140	59	3	25	161	3	141	3.68e-45	145
MS.gene58906.t1	MTR_1g047100	51.429	140	65	2	25	162	3	141	4.49e-45	145
MS.gene58906.t1	MTR_3g067610	53.571	140	59	3	23	161	2	136	8.68e-45	144
MS.gene58906.t1	MTR_1g032070	48.175	137	69	2	25	160	45	180	2.89e-33	117
MS.gene58906.t1	MTR_5g008705	46.923	130	67	2	34	162	2	130	1.01e-31	111
MS.gene58906.t1	MTR_8g105230	44.526	137	66	3	26	157	36	167	2.83e-30	109
MS.gene58906.t1	MTR_1g041285	44.853	136	73	2	26	160	12	146	1.75e-29	106
MS.gene58906.t1	MTR_7g087610	41.007	139	80	2	26	163	12	149	3.33e-29	105
MS.gene58906.t1	MTR_7g087610	39.706	68	41	0	98	165	11	78	6.34e-11	57.8
MS.gene58906.t1	MTR_5g088320	41.727	139	79	2	26	163	12	149	3.48e-29	105
MS.gene58906.t1	MTR_5g088320	39.706	68	41	0	98	165	11	78	5.15e-11	58.2
MS.gene58906.t1	MTR_6g025320	41.727	139	79	2	26	163	12	149	4.00e-29	105
MS.gene58906.t1	MTR_6g025320	39.706	68	41	0	98	165	11	78	5.49e-11	58.2
MS.gene58906.t1	MTR_1g076650	44.118	136	74	2	26	160	12	146	7.96e-29	104
MS.gene58906.t1	MTR_5g008695	49.573	117	54	3	50	163	1	115	8.17e-29	103
MS.gene58906.t1	MTR_4g067270	41.259	143	80	3	23	162	2	143	4.63e-28	102
MS.gene58906.t1	MTR_4g115170	40.000	155	73	3	25	160	63	216	9.35e-27	101
MS.gene58906.t1	MTR_4g086260	39.583	144	81	3	24	165	55	194	1.83e-26	99.8
MS.gene58906.t1	MTR_7g075040	41.611	149	74	4	25	162	46	192	1.95e-26	99.8
MS.gene58906.t1	MTR_5g017510	36.765	136	86	0	25	160	47	182	1.98e-26	99.4
MS.gene58906.t1	MTR_5g017560	36.765	136	86	0	25	160	47	182	1.98e-26	99.4
MS.gene58906.t1	MTR_7g089760	37.762	143	85	3	23	162	2	143	8.85e-26	96.7
MS.gene58906.t1	MTR_8g036075	39.865	148	81	3	26	165	49	196	4.61e-25	96.3
MS.gene58906.t1	MTR_5g017550	36.029	136	86	1	25	160	47	181	8.13e-25	95.1
MS.gene58906.t1	MTR_6g023460	40.152	132	78	1	29	160	11	141	5.33e-24	92.0
MS.gene58906.t1	MTR_4g103630	39.259	135	81	1	26	160	6	139	1.90e-23	90.5
MS.gene58906.t1	MTR_4g103650	38.519	135	82	1	26	160	2	135	1.01e-22	88.6
MS.gene58906.t1	MTR_8g066630	32.867	143	91	2	24	162	15	156	4.89e-22	87.4
MS.gene58906.t1	MTR_2g098890	37.762	143	83	3	23	160	61	202	1.29e-21	87.4
MS.gene58906.t1	MTR_4g103655	37.778	135	83	1	26	160	6	139	3.56e-21	84.7
MS.gene58906.t1	MTR_3g089090	36.364	132	83	1	30	161	9	139	4.21e-21	84.3
MS.gene58906.t1	MTR_3g089070	36.364	132	83	1	30	161	10	140	4.27e-21	84.3
MS.gene58906.t1	MTR_0168s0120	39.474	114	67	2	51	163	1	113	1.01e-20	82.4
MS.gene58906.t1	MTR_6g025320	39.474	114	67	2	51	163	1	113	1.01e-20	82.4
MS.gene58906.t1	MTR_7g090450	37.857	140	82	2	26	160	73	212	8.95e-20	82.8
MS.gene58906.t1	MTR_8g078270	36.029	136	85	2	27	161	54	188	3.31e-19	80.9
MS.gene58906.t1	MTR_5g027000	29.747	158	103	3	14	164	4	160	3.97e-18	77.0
MS.gene58906.t1	MTR_7g115040	37.500	136	83	2	26	160	12	146	5.13e-18	76.6
MS.gene58906.t1	MTR_7g091890	36.765	136	85	1	27	162	364	498	1.58e-17	79.3
MS.gene58906.t1	MTR_5g092810	34.965	143	91	2	23	165	394	534	1.96e-17	79.3
MS.gene58906.t1	MTR_1g071150	31.111	135	92	1	26	160	12	145	2.37e-17	74.7
MS.gene58906.t1	MTR_3g083470	32.353	136	80	2	26	160	93	217	3.40e-17	76.3
MS.gene58906.t1	MTR_3g088655	31.973	147	88	3	26	160	8	154	7.66e-16	71.2
MS.gene58906.t1	MTR_4g112460	27.660	141	98	2	24	161	9	148	7.81e-16	71.2
MS.gene58906.t1	MTR_3g051770	33.803	142	87	2	27	162	389	529	2.14e-15	73.2
MS.gene58906.t1	MTR_4g132070	35.821	134	84	2	27	160	397	528	2.70e-15	73.2
MS.gene58906.t1	MTR_5g009830	35.075	134	85	2	27	160	372	503	5.92e-15	72.0
MS.gene58906.t1	MTR_1g030440	33.117	154	83	5	25	166	21	166	8.08e-15	68.6
MS.gene58906.t1	MTR_1g026190	33.088	136	85	3	27	160	388	519	8.27e-15	71.6
MS.gene58906.t1	MTR_7g074240	31.447	159	91	5	27	172	25	178	1.37e-14	68.2
MS.gene58906.t1	MTR_5g011850	32.624	141	85	4	27	163	13	147	2.03e-14	67.0
MS.gene58906.t1	MTR_1g052530	33.824	136	89	1	27	162	358	492	3.94e-14	69.7
MS.gene58906.t1	MTR_4g107490	32.624	141	92	3	21	160	373	511	4.70e-14	69.3
MS.gene58906.t1	MTR_8g069915	28.058	139	96	2	26	161	12	149	4.94e-14	66.6
MS.gene58906.t1	MTR_7g068710	29.710	138	96	1	23	160	358	494	5.91e-14	68.9
MS.gene58906.t1	MTR_0028s0170	32.090	134	89	2	27	160	384	515	6.45e-14	68.9
MS.gene58906.t1	MTR_3g055570	34.058	138	76	3	24	161	50	172	7.89e-14	66.2
MS.gene58906.t1	MTR_8g099095	33.582	134	87	2	27	160	372	503	1.44e-13	68.2
MS.gene58906.t1	MTR_1g041150	32.090	134	88	2	27	160	424	554	1.52e-13	67.8
MS.gene58906.t1	MTR_5g089320	31.343	134	90	2	27	160	374	505	2.23e-13	67.4
MS.gene58906.t1	MTR_4g132040	32.836	134	88	2	27	160	401	532	2.46e-13	67.4
MS.gene58906.t1	MTR_6g007613	40.000	65	39	0	100	164	30	94	3.90e-13	63.9
MS.gene58906.t1	MTR_7g074020	40.000	65	39	0	100	164	31	95	5.21e-13	63.9
MS.gene58906.t1	MTR_3g055510	33.019	106	52	2	56	158	42	131	5.76e-13	63.2
MS.gene58906.t1	MTR_6g007613	36.364	77	49	0	88	164	18	94	5.91e-13	63.9
MS.gene58906.t1	MTR_6g007613	30.657	137	91	3	26	160	29	163	3.97e-11	58.9
MS.gene58906.t1	MTR_7g074020	32.143	140	85	3	26	160	30	164	6.82e-13	63.5
MS.gene58906.t1	MTR_7g074020	40.000	65	39	0	100	164	31	95	7.81e-13	63.5
MS.gene58906.t1	MTR_5g079470	44.928	69	36	1	23	91	7	73	1.41e-12	60.5
MS.gene58906.t1	MTR_3g098090	30.147	136	88	3	27	160	338	468	2.11e-12	64.7
MS.gene58906.t1	MTR_3g098070	28.758	153	99	4	27	174	335	482	2.92e-12	64.3
MS.gene58906.t1	MTR_1g096490	32.353	136	85	3	27	160	336	466	4.59e-12	63.5
MS.gene58906.t1	MTR_1g054865	31.618	136	86	3	27	160	467	597	1.13e-11	62.4
MS.gene58906.t1	MTR_8g095440	29.412	153	98	4	27	174	336	483	1.56e-11	62.0
MS.gene58906.t1	MTR_4g066660	30.657	137	93	2	24	160	375	509	1.99e-11	61.6
MS.gene58906.t1	MTR_1g055255	30.597	134	90	2	27	160	430	560	2.72e-11	61.6
MS.gene58906.t1	MTR_3g055585	29.078	141	75	3	24	159	50	170	3.25e-11	59.3
MS.gene58906.t1	MTR_5g099240	32.836	134	87	2	27	160	330	460	5.37e-11	60.5
MS.gene58906.t1	MTR_5g099240	32.836	134	87	2	27	160	402	532	5.89e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58906.t1	AT1G18210	57.432	148	58	3	15	161	11	154	2.89e-54	170
MS.gene58906.t1	AT1G18210	57.432	148	58	3	15	161	11	154	2.89e-54	170
MS.gene58906.t1	AT1G73630	55.921	152	59	4	11	162	9	152	1.46e-52	165
MS.gene58906.t1	AT1G66400	51.748	143	65	2	21	160	10	151	9.38e-44	142
MS.gene58906.t1	AT5G37770	52.740	146	63	2	21	161	12	156	1.66e-40	134
MS.gene58906.t1	AT5G37770	52.740	146	63	2	21	161	12	156	1.66e-40	134
MS.gene58906.t1	AT1G24620	47.917	144	65	3	23	161	34	172	3.26e-36	124
MS.gene58906.t1	AT3G56800	42.446	139	78	2	26	163	12	149	1.57e-29	106
MS.gene58906.t1	AT3G56800	39.706	68	41	0	98	165	11	78	5.99e-11	58.2
MS.gene58906.t1	AT2G27030	42.446	139	78	2	26	163	12	149	1.57e-29	106
MS.gene58906.t1	AT2G27030	39.706	68	41	0	98	165	11	78	5.99e-11	58.2
MS.gene58906.t1	AT2G41110	42.446	139	78	2	26	163	12	149	1.57e-29	106
MS.gene58906.t1	AT2G41110	39.706	68	41	0	98	165	11	78	5.99e-11	58.2
MS.gene58906.t1	AT5G21274	42.446	139	78	2	26	163	12	149	1.69e-29	106
MS.gene58906.t1	AT5G21274	39.706	68	41	0	98	165	11	78	5.99e-11	58.2
MS.gene58906.t1	AT3G43810	41.727	139	79	2	26	163	12	149	4.19e-29	105
MS.gene58906.t1	AT3G43810	39.706	68	41	0	98	165	11	78	5.75e-11	58.2
MS.gene58906.t1	AT2G27030	40.816	147	85	2	24	169	10	155	4.30e-29	106
MS.gene58906.t1	AT5G37780	41.007	139	80	2	26	163	12	149	7.20e-29	104
MS.gene58906.t1	AT5G37780	39.706	68	41	0	98	165	11	78	4.77e-11	58.2
MS.gene58906.t1	AT1G66410	41.007	139	80	2	26	163	12	149	7.20e-29	104
MS.gene58906.t1	AT1G66410	39.706	68	41	0	98	165	11	78	4.77e-11	58.2
MS.gene58906.t1	AT2G15680	40.127	157	81	5	11	162	36	184	8.59e-29	105
MS.gene58906.t1	AT4G14640	41.912	136	77	2	26	160	13	147	6.39e-28	102
MS.gene58906.t1	AT3G43810	41.429	140	80	2	24	162	10	148	9.99e-28	103
MS.gene58906.t1	AT5G17470	38.732	142	83	2	27	165	3	143	2.94e-27	100
MS.gene58906.t1	AT2G36180	39.456	147	80	4	27	167	1	144	5.81e-27	99.8
MS.gene58906.t1	AT1G05990	37.589	141	83	3	26	162	5	144	8.03e-27	99.4
MS.gene58906.t1	AT3G22930	41.176	136	78	2	26	160	35	169	1.37e-26	99.4
MS.gene58906.t1	AT2G41110	39.073	151	78	3	26	163	12	161	2.33e-26	98.6
MS.gene58906.t1	AT3G59440	36.943	157	91	3	8	162	38	188	6.09e-26	98.6
MS.gene58906.t1	AT3G07490	37.762	143	85	3	23	162	2	143	8.64e-26	97.1
MS.gene58906.t1	AT4G03290	36.111	144	85	3	23	160	2	144	7.98e-25	94.4
MS.gene58906.t1	AT5G37780	37.013	154	80	3	26	163	12	164	1.42e-24	94.0
MS.gene58906.t1	AT3G03400	39.695	131	73	4	27	153	6	134	2.02e-24	92.8
MS.gene58906.t1	AT4G12860	36.364	143	87	3	23	162	2	143	9.38e-24	91.7
MS.gene58906.t1	AT2G41090	37.500	144	87	2	24	167	10	150	1.23e-23	92.4
MS.gene58906.t1	AT4G14640	40.984	122	70	2	40	160	9	129	2.24e-23	90.1
MS.gene58906.t1	AT5G37780	40.000	125	73	2	40	163	13	136	2.27e-23	90.1
MS.gene58906.t1	AT1G66410	40.000	125	73	2	40	163	36	159	3.24e-23	90.5
MS.gene58906.t1	AT5G37780	40.000	125	73	2	40	163	52	175	6.55e-23	90.1
MS.gene58906.t1	AT2G43290	35.862	145	84	4	26	162	65	208	1.34e-22	90.1
MS.gene58906.t1	AT2G41410	34.320	169	99	5	9	167	48	214	2.51e-22	89.7
MS.gene58906.t1	AT3G10190	35.616	146	91	2	16	160	62	205	7.81e-22	88.2
MS.gene58906.t1	AT1G32250	32.877	146	90	2	24	162	14	158	9.88e-22	86.7
MS.gene58906.t1	AT3G43810	39.474	114	67	2	51	163	1	113	1.06e-20	82.4
MS.gene58906.t1	AT3G43810	39.474	114	67	2	51	163	1	113	1.06e-20	82.4
MS.gene58906.t1	AT1G66410	38.596	114	68	2	51	163	1	113	1.47e-20	82.4
MS.gene58906.t1	AT1G66410	38.596	114	68	2	51	163	1	113	1.47e-20	82.4
MS.gene58906.t1	AT3G50770	35.664	143	85	4	25	161	63	204	2.00e-20	84.3
MS.gene58906.t1	AT3G03000	32.903	155	94	5	13	162	8	157	2.13e-19	80.5
MS.gene58906.t1	AT2G41100	32.143	168	90	4	26	172	66	230	2.73e-18	80.1
MS.gene58906.t1	AT2G41100	32.143	168	90	4	26	172	66	230	2.73e-18	80.1
MS.gene58906.t1	AT2G41100	32.143	168	90	4	26	172	66	230	2.73e-18	80.1
MS.gene58906.t1	AT2G41100	32.143	168	90	4	26	172	101	265	4.37e-18	80.1
MS.gene58906.t1	AT2G41100	32.468	154	82	3	26	160	12	162	3.03e-17	77.8
MS.gene58906.t1	AT2G41100	32.143	168	90	4	26	172	101	265	4.37e-18	80.1
MS.gene58906.t1	AT2G41100	32.468	154	82	3	26	160	12	162	3.03e-17	77.8
MS.gene58906.t1	AT5G42380	34.507	142	86	3	23	160	46	184	5.47e-18	77.4
MS.gene58906.t1	AT1G18530	30.216	139	93	2	26	161	7	144	7.58e-18	76.3
MS.gene58906.t1	AT3G51920	32.143	140	93	2	24	162	10	148	1.58e-17	75.5
MS.gene58906.t1	AT4G04740	37.500	136	79	3	27	160	374	505	2.01e-17	79.3
MS.gene58906.t1	AT4G04740	37.500	136	79	3	27	160	374	505	2.01e-17	79.3
MS.gene58906.t1	AT4G04740	37.500	136	79	3	27	160	374	505	2.01e-17	79.3
MS.gene58906.t1	AT4G04740	37.500	136	79	3	27	160	374	505	2.01e-17	79.3
MS.gene58906.t1	AT4G04740	37.500	136	79	3	27	160	374	505	2.01e-17	79.3
MS.gene58906.t1	AT4G04740	37.500	136	79	3	27	160	374	505	2.01e-17	79.3
MS.gene58906.t1	AT5G44460	36.250	160	87	5	18	164	21	178	2.79e-17	75.5
MS.gene58906.t1	AT3G57530	36.296	135	82	3	27	160	369	500	7.75e-17	77.4
MS.gene58906.t1	AT4G04695	35.294	136	86	2	27	162	337	470	1.98e-16	76.3
MS.gene58906.t1	AT4G37010	33.577	137	87	3	26	160	27	161	2.15e-16	72.8
MS.gene58906.t1	AT4G37010	33.577	137	87	3	26	160	31	165	2.31e-16	72.8
MS.gene58906.t1	AT4G23650	35.075	134	85	2	27	160	384	515	8.62e-16	74.3
MS.gene58906.t1	AT3G51850	31.884	138	93	1	23	160	356	492	9.86e-16	74.3
MS.gene58906.t1	AT1G61950	31.724	145	97	2	23	167	401	543	1.33e-15	73.9
MS.gene58906.t1	AT1G62820	33.333	141	84	4	27	163	14	148	2.60e-15	69.7
MS.gene58906.t1	AT4G20780	32.143	168	91	5	18	164	22	187	2.78e-15	70.5
MS.gene58906.t1	AT1G12310	33.333	141	84	4	27	163	14	148	2.89e-15	69.3
MS.gene58906.t1	AT5G19360	35.075	134	85	2	27	160	374	505	3.21e-15	72.8
MS.gene58906.t1	AT4G04720	36.029	136	81	3	27	160	385	516	3.25e-15	72.8
MS.gene58906.t1	AT4G04720	36.029	136	81	3	27	160	385	516	3.25e-15	72.8
MS.gene58906.t1	AT4G04700	35.294	136	82	3	27	160	337	468	4.01e-15	72.4
MS.gene58906.t1	AT3G03410	31.387	137	85	2	28	164	4	131	4.60e-15	68.6
MS.gene58906.t1	AT3G50360	32.847	137	88	3	26	160	27	161	6.16e-15	68.9
MS.gene58906.t1	AT3G50360	41.538	65	38	0	100	164	28	92	9.22e-13	63.2
MS.gene58906.t1	AT4G21940	33.571	140	87	3	27	164	407	542	6.38e-15	72.0
MS.gene58906.t1	AT1G76650	33.824	136	87	2	26	160	43	176	6.42e-15	69.3
MS.gene58906.t1	AT1G76650	33.824	136	87	2	26	160	43	176	6.42e-15	69.3
MS.gene58906.t1	AT2G41860	34.328	134	87	1	27	160	360	492	6.61e-15	72.0
MS.gene58906.t1	AT2G41860	34.328	134	87	1	27	160	360	492	6.81e-15	72.0
MS.gene58906.t1	AT4G21940	33.571	140	87	3	27	164	407	542	7.11e-15	72.0
MS.gene58906.t1	AT1G21550	31.944	144	90	2	25	160	9	152	9.56e-15	68.2
MS.gene58906.t1	AT1G76040	33.582	134	87	2	27	160	179	310	1.63e-14	70.1
MS.gene58906.t1	AT1G76040	33.582	134	87	2	27	160	179	310	1.63e-14	70.1
MS.gene58906.t1	AT5G12480	33.577	137	89	2	27	162	271	406	2.37e-14	70.1
MS.gene58906.t1	AT5G12480	33.577	137	89	2	27	162	365	500	2.94e-14	70.1
MS.gene58906.t1	AT1G76040	33.582	134	87	2	27	160	417	548	3.06e-14	70.1
MS.gene58906.t1	AT5G12180	33.582	134	87	2	27	160	379	510	4.96e-14	69.3
MS.gene58906.t1	AT4G14640	37.113	97	59	2	26	121	13	108	7.95e-14	65.1
MS.gene58906.t1	AT4G38230	32.432	148	97	2	27	174	186	330	1.00e-13	68.2
MS.gene58906.t1	AT4G38230	32.432	148	97	2	27	174	360	504	1.85e-13	67.8
MS.gene58906.t1	AT4G38230	32.432	148	97	2	27	174	330	474	2.02e-13	67.8
MS.gene58906.t1	AT4G38230	32.432	148	97	2	27	174	330	474	2.02e-13	67.8
MS.gene58906.t1	AT3G20410	33.333	138	90	2	23	160	393	528	2.21e-13	67.4
MS.gene58906.t1	AT3G20410	33.333	138	90	2	23	160	393	528	2.21e-13	67.4
MS.gene58906.t1	AT3G22930	37.500	96	58	2	26	120	35	129	2.72e-13	63.9
MS.gene58906.t1	AT1G76650	31.111	135	82	1	26	160	43	166	3.34e-13	64.3
MS.gene58906.t1	AT3G25600	26.950	141	99	2	24	161	10	149	3.74e-13	64.3
MS.gene58906.t1	AT1G74740	32.867	143	93	3	21	162	359	499	6.27e-13	66.2
MS.gene58906.t1	AT3G10660	30.597	134	90	2	27	160	492	622	7.90e-13	65.9
MS.gene58906.t1	AT3G10660	30.597	134	90	2	27	160	492	622	7.90e-13	65.9
MS.gene58906.t1	AT1G76640	31.159	138	91	2	26	160	22	158	9.13e-13	63.2
MS.gene58906.t1	AT5G19450	32.353	136	92	0	27	162	363	498	1.26e-12	65.5
MS.gene58906.t1	AT5G19450	32.353	136	92	0	27	162	363	498	1.26e-12	65.5
MS.gene58906.t1	AT1G50700	31.884	138	92	2	23	160	375	510	1.26e-12	65.5
MS.gene58906.t1	AT2G17290	32.450	151	96	3	27	174	391	538	1.75e-12	65.1
MS.gene58906.t1	AT2G17290	32.450	151	96	3	27	174	391	538	1.75e-12	65.1
MS.gene58906.t1	AT1G18890	31.469	143	95	3	21	162	363	503	2.62e-12	64.3
MS.gene58906.t1	AT5G23580	32.090	134	88	2	27	160	328	458	2.82e-12	64.3
MS.gene58906.t1	AT3G03430	44.444	63	33	1	29	91	12	72	2.93e-12	59.7
MS.gene58906.t1	AT5G04870	31.852	135	87	3	27	160	456	586	4.17e-12	63.9
MS.gene58906.t1	AT1G35670	32.090	134	88	3	27	160	332	462	5.64e-12	63.5
MS.gene58906.t1	AT4G09570	32.090	134	88	3	27	160	331	461	5.72e-12	63.5
MS.gene58906.t1	AT3G01830	30.935	139	90	3	25	160	10	145	1.43e-11	59.7
MS.gene58906.t1	AT2G41100	30.534	131	68	3	63	172	12	140	1.45e-11	60.8
MS.gene58906.t1	AT1G50700	28.659	164	89	4	23	160	375	536	3.12e-11	61.2
MS.gene58906.t1	AT4G04710	31.343	134	90	2	27	160	324	455	4.65e-11	60.8
MS.gene58906.t1	AT4G04710	31.343	134	90	2	27	160	351	482	4.77e-11	60.8
MS.gene58906.t1	AT4G04710	31.343	134	90	2	27	160	338	469	4.82e-11	60.8
MS.gene58906.t1	AT2G31500	29.197	137	93	3	29	162	374	509	5.25e-11	60.8
MS.gene58906.t1	AT4G04710	32.353	136	88	3	27	160	351	484	5.56e-11	60.5
MS.gene58906.t1	AT5G17480	46.667	60	30	1	29	88	12	69	5.61e-11	56.6

Find 43 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCGGCAGAACGCGGCGAATT+CGG	0.292639	6.1:+71324730	None:intergenic
CGGCAGAACGCGGCGAATTC+GGG	0.362081	6.1:+71324731	None:intergenic
CTAATTAACAGTTTCGTTAA+CGG	0.369304	6.1:+71324472	None:intergenic
TTGATGAAACCGTCGTGGTC+GGG	0.402953	6.1:+71324758	None:intergenic
ATGGATTCGTTTGTTGCCAT+TGG	0.410479	6.1:+71324977	None:intergenic
AGTGGTGAAGGTGTTGGAGC+CGG	0.455587	6.1:+71324938	None:intergenic
AACGGTTTCGAGTTCGTTGA+CGG	0.458198	6.1:+71324847	None:intergenic
GGATCTGAGTGTTCGGAGAA+CGG	0.493457	6.1:+71324829	None:intergenic
CCGAGGAGTGGTGAAGGTGT+TGG	0.510460	6.1:+71324932	None:intergenic
TTCAACAACTTCGACGCAAA+CGG	0.511287	6.1:-71324884	MS.gene58906:CDS
GTGGTGAAGGTGTTGGAGCC+GGG	0.512054	6.1:+71324939	None:intergenic
TGATGAAACCGTCGTGGTCG+GGG	0.513593	6.1:+71324759	None:intergenic
CATCTTGCACTGGATCGTCT+TGG	0.513604	6.1:-71324614	MS.gene58906:CDS
CGAAGAACTCCGACGCGTCA+TGG	0.521651	6.1:-71324792	MS.gene58906:CDS
AACTTCGACGCAAACGGCGA+CGG	0.533145	6.1:-71324878	MS.gene58906:CDS
GTTGATGAAACCGTCGTGGT+CGG	0.536310	6.1:+71324757	None:intergenic
CGCTCCGACACTACCGGCGG+CGG	0.536864	6.1:-71324710	MS.gene58906:CDS
AAGAGCTGAATCGCCGCCGC+CGG	0.537522	6.1:+71324697	None:intergenic
TTCTTCGTGTTGTGGTACGT+CGG	0.540260	6.1:+71324808	None:intergenic
TTCACCACTCCTCGGCGACA+TGG	0.543332	6.1:-71324924	MS.gene58906:CDS
GTACGTCGGATCTGAGTGTT+CGG	0.545867	6.1:+71324822	None:intergenic
TGAAGAGCTTCATCTTGCAC+TGG	0.547507	6.1:-71324624	MS.gene58906:CDS
GGAGCCGGGTCGGATTCTAC+TGG	0.548888	6.1:+71324953	None:intergenic
TTCTGCCGCTCCGACACTAC+CGG	0.550470	6.1:-71324716	MS.gene58906:CDS
ATCGCCGCCGCCGGTAGTGT+CGG	0.551161	6.1:+71324706	None:intergenic
CGTCGGAGTTCTTCGTGTTG+TGG	0.552939	6.1:+71324800	None:intergenic
TCGTCCATGTCGCCGAGGAG+TGG	0.561055	6.1:+71324920	None:intergenic
ATGTCGCCGAGGAGTGGTGA+AGG	0.569574	6.1:+71324926	None:intergenic
TGAAGGTGTTGGAGCCGGGT+CGG	0.584534	6.1:+71324943	None:intergenic
CGGGTCGGATTCTACTGGAA+TGG	0.586331	6.1:+71324958	None:intergenic
ATTAAATCTGTTGATTCTGA+CGG	0.599831	6.1:-71324557	MS.gene58906:CDS
TGGAATGAAGTGTTCCGTTG+AGG	0.607616	6.1:-71324594	MS.gene58906:CDS
TCTGTTGATTCTGACGGTGA+CGG	0.619111	6.1:-71324551	MS.gene58906:CDS
CCAACACCTTCACCACTCCT+CGG	0.619994	6.1:-71324932	MS.gene58906:CDS
CGCCGCCGGTAGTGTCGGAG+CGG	0.637897	6.1:+71324711	None:intergenic
TGAGTTCTTCCATGACGCGT+CGG	0.640790	6.1:+71324783	None:intergenic
CATTCCAGTAGAATCCGACC+CGG	0.648159	6.1:-71324957	MS.gene58906:CDS
AGTGTCGGAGCGGCAGAACG+CGG	0.649477	6.1:+71324721	None:intergenic
CATCTCATGACATTCCTCAA+CGG	0.668312	6.1:+71324580	None:intergenic
TGAGTTCGTCCATGTCGCCG+AGG	0.697339	6.1:+71324915	None:intergenic
GTAAGTTGATGAAACCGTCG+TGG	0.715924	6.1:+71324753	None:intergenic
TGCCGCTCCGACACTACCGG+CGG	0.726030	6.1:-71324713	MS.gene58906:CDS
GAACTCAGCCCCGACCACGA+CGG	0.729850	6.1:-71324767	MS.gene58906:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CTAATTAACAGTTTCGTTAA+CGG	+	chr6.1:71324977-71324996	None:intergenic	25.0%
!!!	ATTAAATCTGTTGATTCTGA+CGG	-	chr6.1:71324889-71324908	MS.gene58906:CDS	25.0%
	CTGTACGATAAAGACAAAAA+CGG	-	chr6.1:71324787-71324806	MS.gene58906:CDS	30.0%
	CATCTCATGACATTCCTCAA+CGG	+	chr6.1:71324869-71324888	None:intergenic	40.0%
	TTCAACAACTTCGACGCAAA+CGG	-	chr6.1:71324562-71324581	MS.gene58906:CDS	40.0%
	TGAAGAGCTTCATCTTGCAC+TGG	-	chr6.1:71324822-71324841	MS.gene58906:CDS	45.0%
	TTCTTCGTGTTGTGGTACGT+CGG	+	chr6.1:71324641-71324660	None:intergenic	45.0%
!	TGGAATGAAGTGTTCCGTTG+AGG	-	chr6.1:71324852-71324871	MS.gene58906:CDS	45.0%
!!	AACGGTTTCGAGTTCGTTGA+CGG	+	chr6.1:71324602-71324621	None:intergenic	45.0%
!!	GTAAGTTGATGAAACCGTCG+TGG	+	chr6.1:71324696-71324715	None:intergenic	45.0%
!!	TCTGTTGATTCTGACGGTGA+CGG	-	chr6.1:71324895-71324914	MS.gene58906:CDS	45.0%
	CATCTTGCACTGGATCGTCT+TGG	-	chr6.1:71324832-71324851	MS.gene58906:CDS	50.0%
	CATTCCAGTAGAATCCGACC+CGG	-	chr6.1:71324489-71324508	MS.gene58906:CDS	50.0%
	GGATCTGAGTGTTCGGAGAA+CGG	+	chr6.1:71324620-71324639	None:intergenic	50.0%
	GTACGTCGGATCTGAGTGTT+CGG	+	chr6.1:71324627-71324646	None:intergenic	50.0%
	TGAGTTCTTCCATGACGCGT+CGG	+	chr6.1:71324666-71324685	None:intergenic	50.0%
	TTGATGAAACCGTCGTGGTC+GGG	+	chr6.1:71324691-71324710	None:intergenic	50.0%
!	GTTGATGAAACCGTCGTGGT+CGG	+	chr6.1:71324692-71324711	None:intergenic	50.0%
	AACTTCGACGCAAACGGCGA+CGG	-	chr6.1:71324568-71324587	MS.gene58906:CDS	55.0%
	CCAACACCTTCACCACTCCT+CGG	-	chr6.1:71324514-71324533	MS.gene58906:CDS	55.0%
	CGGGTCGGATTCTACTGGAA+TGG	+	chr6.1:71324491-71324510	None:intergenic	55.0%
	CGTCGGAGTTCTTCGTGTTG+TGG	+	chr6.1:71324649-71324668	None:intergenic	55.0%
	TGATGAAACCGTCGTGGTCG+GGG	+	chr6.1:71324690-71324709	None:intergenic	55.0%
!!	AGTGGTGAAGGTGTTGGAGC+CGG	+	chr6.1:71324511-71324530	None:intergenic	55.0%
	ATGTCGCCGAGGAGTGGTGA+AGG	+	chr6.1:71324523-71324542	None:intergenic	60.0%
	CGAAGAACTCCGACGCGTCA+TGG	-	chr6.1:71324654-71324673	MS.gene58906:CDS	60.0%
	TGAGTTCGTCCATGTCGCCG+AGG	+	chr6.1:71324534-71324553	None:intergenic	60.0%
	TTCACCACTCCTCGGCGACA+TGG	-	chr6.1:71324522-71324541	MS.gene58906:CDS	60.0%
	TTCTGCCGCTCCGACACTAC+CGG	-	chr6.1:71324730-71324749	MS.gene58906:CDS	60.0%
!	CCGAGGAGTGGTGAAGGTGT+TGG	+	chr6.1:71324517-71324536	None:intergenic	60.0%
!!	GTGGTGAAGGTGTTGGAGCC+GGG	+	chr6.1:71324510-71324529	None:intergenic	60.0%
!!	TGAAGGTGTTGGAGCCGGGT+CGG	+	chr6.1:71324506-71324525	None:intergenic	60.0%
	AAGAGCTGAATCGCCGCCGC+CGG	+	chr6.1:71324752-71324771	None:intergenic	65.0%
	CGGCAGAACGCGGCGAATTC+GGG	+	chr6.1:71324718-71324737	None:intergenic	65.0%
	GAACTCAGCCCCGACCACGA+CGG	-	chr6.1:71324679-71324698	MS.gene58906:CDS	65.0%
	GCGGCAGAACGCGGCGAATT+CGG	+	chr6.1:71324719-71324738	None:intergenic	65.0%
	GGAGCCGGGTCGGATTCTAC+TGG	+	chr6.1:71324496-71324515	None:intergenic	65.0%
	TCGTCCATGTCGCCGAGGAG+TGG	+	chr6.1:71324529-71324548	None:intergenic	65.0%
!	AGTGTCGGAGCGGCAGAACG+CGG	+	chr6.1:71324728-71324747	None:intergenic	65.0%
	ATCGCCGCCGCCGGTAGTGT+CGG	+	chr6.1:71324743-71324762	None:intergenic	70.0%
	TGCCGCTCCGACACTACCGG+CGG	-	chr6.1:71324733-71324752	MS.gene58906:CDS	70.0%
	CGCTCCGACACTACCGGCGG+CGG	-	chr6.1:71324736-71324755	MS.gene58906:CDS	75.0%
!	CGCCGCCGGTAGTGTCGGAG+CGG	+	chr6.1:71324738-71324757	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.1	gene	71324472	71324996	71324472	ID=MS.gene58906
chr6.1	mRNA	71324472	71324996	71324472	ID=MS.gene58906.t1;Parent=MS.gene58906
chr6.1	exon	71324472	71324996	71324472	ID=MS.gene58906.t1.exon1;Parent=MS.gene58906.t1
chr6.1	CDS	71324472	71324996	71324472	ID=cds.MS.gene58906.t1;Parent=MS.gene58906.t1

Gene Sequence

>MS.gene58906

ATGGCAACAAACGAATCCATTCCAGTAGAATCCGACCCGGCTCCAACACCTTCACCACTCCTCGGCGACATGGACGAACTCAAAAAAGTCTTCAACAACTTCGACGCAAACGGCGACGGCAAGATCTCCGTCAACGAACTCGAAACCGTTCTCCGAACACTCAGATCCGACGTACCACAACACGAAGAACTCCGACGCGTCATGGAAGAACTCAGCCCCGACCACGACGGTTTCATCAACTTACCCGAATTCGCCGCGTTCTGCCGCTCCGACACTACCGGCGGCGGCGATTCAGCTCTTCGTGACGCGTTCGATCTGTACGATAAAGACAAAAACGGACTCATTTCAACTGAAGAGCTTCATCTTGCACTGGATCGTCTTGGAATGAAGTGTTCCGTTGAGGAATGTCATGAGATGATTAAATCTGTTGATTCTGACGGTGACGGTAGTGTTAACTTTGAAGAATTCAAGAAGATGATGACAGCGAGAGTCAAGACTCACACCGTTAACGAAACTGTTAATTAG

Protein sequence

>MS.gene58906.t1

MATNESIPVESDPAPTPSPLLGDMDELKKVFNNFDANGDGKISVNELETVLRTLRSDVPQHEELRRVMEELSPDHDGFINLPEFAAFCRSDTTGGGDSALRDAFDLYDKDKNGLISTEELHLALDRLGMKCSVEECHEMIKSVDSDGDGSVNFEEFKKMMTARVKTHTVNETVN