AlfalfaGEDB | MS.gene58860

M. sativa cultivar XinJiangDaYe / MS.gene58860

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58860.t1	XP_013452904.1	90.8	174	16	0	1	174	1	174	1.60E-82	315.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58860.t1	Q9LE22	53.1	160	63	3	3	162	8	155	7.0e-39	161.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58860.t1	A0A072UBH5	90.8	174	16	0	1	174	1	174	1.1e-82	315.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene58860	MS.gene061261	PPI
MS.gene58860	MS.gene80011	PPI
MS.gene58860	MS.gene036930	PPI
MS.gene58860	MS.gene21932	PPI
MS.gene58860	MS.gene052672	PPI
MS.gene58860	MS.gene026618	PPI
MS.gene58860	MS.gene026530	PPI
MS.gene58860	MS.gene53648	PPI
MS.gene58860	MS.gene27529	PPI
MS.gene58860	MS.gene015470	PPI
MS.gene58860	MS.gene008831	PPI
MS.gene58860	MS.gene55545	PPI
MS.gene58860	MS.gene056461	PPI
MS.gene04917	MS.gene58860	PPI
MS.gene58860	MS.gene98972	PPI
MS.gene58860	MS.gene29459	PPI
MS.gene58860	MS.gene71207	PPI
MS.gene58860	MS.gene62689	PPI
MS.gene58860	MS.gene35562	PPI
MS.gene58860	MS.gene67281	PPI
MS.gene58860	MS.gene92775	PPI
MS.gene58860	MS.gene92789	PPI
MS.gene58860	MS.gene21155	PPI
MS.gene58860	MS.gene53662	PPI
MS.gene58860	MS.gene63281	PPI
MS.gene58860	MS.gene060446	PPI
MS.gene58860	MS.gene020515	PPI
MS.gene58860	MS.gene68345	PPI
MS.gene58860	MS.gene013748	PPI
MS.gene58860	MS.gene008225	PPI
MS.gene58860	MS.gene97948	PPI
MS.gene58860	MS.gene21696	PPI
MS.gene58860	MS.gene64316	PPI
MS.gene58860	MS.gene29793	PPI
MS.gene58860	MS.gene98294	PPI
MS.gene58860	MS.gene05284	PPI
MS.gene64324	MS.gene58860	PPI
MS.gene58860	MS.gene22553	PPI
MS.gene58860	MS.gene074045	PPI
MS.gene58860	MS.gene03228	PPI
MS.gene58860	MS.gene000738	PPI
MS.gene58860	MS.gene04917	PPI
MS.gene58860	MS.gene46237	PPI
MS.gene58860	MS.gene056383	PPI
MS.gene58860	MS.gene64317	PPI
MS.gene58860	MS.gene46886	PPI
MS.gene58860	MS.gene036915	PPI
MS.gene58860	MS.gene025777	PPI
MS.gene58860	MS.gene040331	PPI
MS.gene58860	MS.gene022455	PPI
MS.gene58860	MS.gene070167	PPI
MS.gene58860	MS.gene038456	PPI
MS.gene58860	MS.gene63000	PPI
MS.gene58860	MS.gene93087	PPI
MS.gene58860	MS.gene64310	PPI
MS.gene58860	MS.gene046988	PPI
MS.gene58860	MS.gene057293	PPI
MS.gene58860	MS.gene74452	PPI
MS.gene58860	MS.gene09934	PPI
MS.gene58860	MS.gene54637	PPI
MS.gene58860	MS.gene79028	PPI
MS.gene58860	MS.gene004899	PPI
MS.gene58860	MS.gene49271	PPI
MS.gene58860	MS.gene003880	PPI
MS.gene58860	MS.gene053319	PPI
MS.gene58860	MS.gene000724	PPI
MS.gene58860	MS.gene65954	PPI
MS.gene58860	MS.gene98295	PPI
MS.gene58860	MS.gene022456	PPI
MS.gene58860	MS.gene001246	PPI
MS.gene58860	MS.gene62258	PPI
MS.gene58860	MS.gene041795	PPI
MS.gene58860	MS.gene85596	PPI
MS.gene58860	MS.gene96922	PPI
MS.gene58860	MS.gene25186	PPI
MS.gene58860	MS.gene80013	PPI
MS.gene58860	MS.gene64324	PPI
MS.gene58860	MS.gene55496	PPI
MS.gene58860	MS.gene025797	PPI
MS.gene58860	MS.gene21931	PPI
MS.gene58860	MS.gene27516	PPI
MS.gene58860	MS.gene64314	PPI
MS.gene58860	MS.gene040127	PPI
MS.gene58860	MS.gene09960	PPI
MS.gene58860	MS.gene011400	PPI
MS.gene58860	MS.gene94551	PPI
MS.gene68345	MS.gene58860	PPI
MS.gene58860	MS.gene62540	PPI
MS.gene58860	MS.gene074100	PPI
MS.gene58860	MS.gene53650	PPI
MS.gene58860	MS.gene066863	PPI
MS.gene58860	MS.gene02545	PPI
MS.gene58860	MS.gene04915	PPI
MS.gene58860	MS.gene61009	PPI
MS.gene58860	MS.gene35563	PPI
MS.gene58860	MS.gene057167	PPI
MS.gene58860	MS.gene64311	PPI
MS.gene58860	MS.gene016268	PPI
MS.gene58860	MS.gene93763	PPI
MS.gene58860	MS.gene49270	PPI
MS.gene58860	MS.gene64307	PPI
MS.gene58860	MS.gene026940	PPI
MS.gene58860	MS.gene024717	PPI
MS.gene58860	MS.gene64327	PPI
MS.gene58860	MS.gene29794	PPI
MS.gene58860	MS.gene28338	PPI
MS.gene58860	MS.gene71511	PPI
MS.gene58860	MS.gene033361	PPI
MS.gene58860	MS.gene87673	PPI
MS.gene58860	MS.gene53659	PPI
MS.gene58860	MS.gene061768	PPI
MS.gene58860	MS.gene89216	PPI
MS.gene58860	MS.gene64308	PPI
MS.gene58860	MS.gene009021	PPI
MS.gene58860	MS.gene47195	PPI
MS.gene58860	MS.gene47134	PPI
MS.gene58860	MS.gene017446	PPI
MS.gene62258	MS.gene58860	PPI
MS.gene58860	MS.gene96914	PPI
MS.gene58860	MS.gene066862	PPI
MS.gene58860	MS.gene96913	PPI
MS.gene58860	MS.gene070168	PPI
MS.gene58860	MS.gene07422	PPI
MS.gene58860	MS.gene062239	PPI
MS.gene58860	MS.gene58906	PPI
MS.gene58860	MS.gene015658	PPI
MS.gene58860	MS.gene83068	PPI
MS.gene58860	MS.gene64313	PPI
MS.gene58860	MS.gene80012	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58860.t1	MTR_6g079570	93.678	174	11	0	1	174	1	174	1.16e-119	335
MS.gene58860.t1	MTR_8g107110	72.222	144	39	1	17	160	15	157	1.80e-69	208
MS.gene58860.t1	MTR_5g079340	57.664	137	57	1	25	161	3	138	3.14e-47	150
MS.gene58860.t1	MTR_1g047100	51.429	140	65	2	25	162	3	141	5.34e-45	145
MS.gene58860.t1	MTR_1g046950	54.286	140	60	3	25	161	3	141	9.09e-45	144
MS.gene58860.t1	MTR_3g067610	52.143	140	61	3	23	161	2	136	1.92e-43	141
MS.gene58860.t1	MTR_1g032070	48.551	138	67	3	25	160	45	180	1.01e-33	118
MS.gene58860.t1	MTR_8g105230	44.526	137	66	3	26	157	36	167	7.84e-31	110
MS.gene58860.t1	MTR_5g008705	46.154	130	68	2	34	162	2	130	9.52e-31	108
MS.gene58860.t1	MTR_7g087610	41.727	139	79	2	26	163	12	149	7.25e-30	107
MS.gene58860.t1	MTR_7g087610	41.096	73	43	0	93	165	6	78	1.75e-11	59.3
MS.gene58860.t1	MTR_5g088320	42.446	139	78	2	26	163	12	149	8.52e-30	107
MS.gene58860.t1	MTR_5g088320	41.096	73	43	0	93	165	6	78	1.64e-11	59.7
MS.gene58860.t1	MTR_6g025320	42.446	139	78	2	26	163	12	149	8.90e-30	107
MS.gene58860.t1	MTR_6g025320	41.096	73	43	0	93	165	6	78	1.45e-11	59.7
MS.gene58860.t1	MTR_1g041285	45.985	137	70	3	26	160	12	146	1.05e-29	106
MS.gene58860.t1	MTR_1g076650	44.118	136	74	2	26	160	12	146	4.94e-29	105
MS.gene58860.t1	MTR_4g067270	41.667	144	78	4	23	162	2	143	3.35e-28	102
MS.gene58860.t1	MTR_5g008695	47.788	113	55	2	50	159	1	112	1.46e-27	100
MS.gene58860.t1	MTR_4g115170	40.000	155	73	3	25	160	63	216	2.36e-27	102
MS.gene58860.t1	MTR_7g075040	41.611	149	74	4	25	162	46	192	8.27e-27	100
MS.gene58860.t1	MTR_5g017510	36.765	136	86	0	25	160	47	182	1.03e-26	100
MS.gene58860.t1	MTR_5g017560	36.765	136	86	0	25	160	47	182	1.03e-26	100
MS.gene58860.t1	MTR_4g086260	38.889	144	82	3	24	165	55	194	1.21e-25	97.8
MS.gene58860.t1	MTR_8g036075	39.865	148	81	3	26	165	49	196	2.54e-25	97.1
MS.gene58860.t1	MTR_7g089760	37.063	143	86	3	23	162	2	143	2.69e-25	95.5
MS.gene58860.t1	MTR_5g017550	36.029	136	86	1	25	160	47	181	4.28e-25	95.9
MS.gene58860.t1	MTR_6g023460	39.394	132	79	1	29	160	11	141	2.80e-24	92.4
MS.gene58860.t1	MTR_4g103630	38.519	135	82	1	26	160	6	139	1.25e-23	90.9
MS.gene58860.t1	MTR_4g103650	37.778	135	83	1	26	160	2	135	6.29e-23	89.0
MS.gene58860.t1	MTR_8g066630	33.566	143	90	2	24	162	15	156	7.67e-23	89.4
MS.gene58860.t1	MTR_0168s0120	40.351	114	66	2	51	163	1	113	2.25e-21	84.3
MS.gene58860.t1	MTR_6g025320	40.351	114	66	2	51	163	1	113	2.25e-21	84.3
MS.gene58860.t1	MTR_4g103655	37.037	135	84	1	26	160	6	139	2.29e-21	85.1
MS.gene58860.t1	MTR_3g089070	35.878	131	83	1	30	160	10	139	2.90e-21	84.7
MS.gene58860.t1	MTR_3g089090	35.878	131	83	1	30	160	9	138	3.02e-21	84.7
MS.gene58860.t1	MTR_2g098890	37.063	143	84	3	23	160	61	202	4.18e-21	86.3
MS.gene58860.t1	MTR_7g090450	37.857	140	82	2	26	160	73	212	4.76e-20	83.6
MS.gene58860.t1	MTR_8g078270	33.121	157	100	3	6	161	36	188	1.21e-19	82.0
MS.gene58860.t1	MTR_7g115040	37.500	136	83	2	26	160	12	146	3.89e-18	77.0
MS.gene58860.t1	MTR_1g071150	31.111	135	92	1	26	160	12	145	4.23e-18	76.6
MS.gene58860.t1	MTR_5g027000	30.216	139	95	2	27	164	23	160	1.87e-17	75.5
MS.gene58860.t1	MTR_3g083470	33.088	136	79	2	26	160	93	217	3.06e-17	76.3
MS.gene58860.t1	MTR_5g092810	34.266	143	92	2	23	165	394	534	4.16e-17	78.2
MS.gene58860.t1	MTR_7g091890	36.029	136	86	1	27	162	364	498	4.60e-17	78.2
MS.gene58860.t1	MTR_1g030440	33.766	154	82	5	25	166	21	166	5.24e-16	71.6
MS.gene58860.t1	MTR_4g112460	27.660	141	98	2	24	161	9	148	1.38e-15	70.9
MS.gene58860.t1	MTR_3g088655	31.293	147	89	3	26	160	8	154	2.15e-15	70.1
MS.gene58860.t1	MTR_5g011850	33.333	141	84	4	27	163	13	147	2.85e-15	69.3
MS.gene58860.t1	MTR_7g074240	32.075	159	90	5	27	172	25	178	3.51e-15	69.7
MS.gene58860.t1	MTR_3g051770	33.099	142	88	2	27	162	389	529	4.66e-15	72.4
MS.gene58860.t1	MTR_4g132070	35.075	134	85	2	27	160	397	528	4.94e-15	72.4
MS.gene58860.t1	MTR_8g069915	28.058	139	96	2	26	161	12	149	1.08e-14	68.6
MS.gene58860.t1	MTR_5g009830	34.328	134	86	2	27	160	372	503	1.38e-14	70.9
MS.gene58860.t1	MTR_1g026190	33.088	136	85	3	27	160	388	519	1.78e-14	70.5
MS.gene58860.t1	MTR_1g041150	32.836	134	87	2	27	160	424	554	3.53e-14	69.7
MS.gene58860.t1	MTR_3g055570	34.058	138	76	3	24	161	50	172	6.40e-14	66.6
MS.gene58860.t1	MTR_1g052530	33.088	136	90	1	27	162	358	492	8.10e-14	68.6
MS.gene58860.t1	MTR_4g107490	32.624	141	92	3	21	160	373	511	8.44e-14	68.6
MS.gene58860.t1	MTR_0028s0170	32.090	134	89	2	27	160	384	515	1.25e-13	68.2
MS.gene58860.t1	MTR_6g007613	41.538	65	38	0	100	164	30	94	1.26e-13	65.5
MS.gene58860.t1	MTR_4g132040	32.836	134	88	2	27	160	401	532	1.55e-13	67.8
MS.gene58860.t1	MTR_7g074020	41.538	65	38	0	100	164	31	95	1.77e-13	65.1
MS.gene58860.t1	MTR_6g007613	41.538	65	38	0	100	164	30	94	1.94e-13	65.1
MS.gene58860.t1	MTR_6g007613	30.714	140	87	3	26	160	29	163	3.20e-11	59.3
MS.gene58860.t1	MTR_7g068710	28.986	138	97	1	23	160	358	494	2.02e-13	67.4
MS.gene58860.t1	MTR_7g074020	41.538	65	38	0	100	164	31	95	2.46e-13	64.7
MS.gene58860.t1	MTR_7g074020	31.293	147	91	3	26	167	30	171	3.89e-13	64.3
MS.gene58860.t1	MTR_8g099095	32.836	134	88	2	27	160	372	503	4.35e-13	66.6
MS.gene58860.t1	MTR_5g089320	30.597	134	91	2	27	160	374	505	4.99e-13	66.2
MS.gene58860.t1	MTR_3g055510	33.019	106	52	2	56	158	42	131	5.58e-13	63.2
MS.gene58860.t1	MTR_7g106710	31.915	141	87	5	23	160	437	571	1.81e-12	64.7
MS.gene58860.t1	MTR_5g079470	43.478	69	37	1	23	91	7	73	2.37e-12	60.1
MS.gene58860.t1	MTR_1g054865	32.353	136	85	3	27	160	467	597	3.54e-12	63.9
MS.gene58860.t1	MTR_3g098090	30.147	136	88	3	27	160	338	468	3.68e-12	63.9
MS.gene58860.t1	MTR_3g098070	30.147	136	88	3	27	160	335	465	5.87e-12	63.2
MS.gene58860.t1	MTR_1g096490	31.618	136	86	3	27	160	336	466	9.77e-12	62.8
MS.gene58860.t1	MTR_3g055585	28.676	136	82	1	24	159	50	170	1.38e-11	60.1
MS.gene58860.t1	MTR_1g055255	32.593	135	86	4	27	160	430	560	1.44e-11	62.4
MS.gene58860.t1	MTR_8g095440	30.882	136	87	3	27	160	336	466	2.86e-11	61.2
MS.gene58860.t1	MTR_4g066660	30.657	137	93	2	24	160	375	509	4.75e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58860.t1	AT1G18210	56.954	151	58	3	14	161	8	154	1.02e-53	168
MS.gene58860.t1	AT1G18210	56.954	151	58	3	14	161	8	154	1.02e-53	168
MS.gene58860.t1	AT1G73630	55.921	152	59	4	11	162	9	152	5.00e-52	164
MS.gene58860.t1	AT1G66400	51.748	143	65	2	21	160	10	151	9.27e-44	142
MS.gene58860.t1	AT5G37770	47.826	161	68	3	11	161	2	156	1.99e-41	137
MS.gene58860.t1	AT5G37770	47.826	161	68	3	11	161	2	156	1.99e-41	137
MS.gene58860.t1	AT1G24620	46.053	152	72	3	23	169	34	180	9.40e-37	125
MS.gene58860.t1	AT5G37780	42.446	139	78	2	26	163	12	149	3.45e-30	108
MS.gene58860.t1	AT5G37780	41.096	73	43	0	93	165	6	78	1.47e-11	59.7
MS.gene58860.t1	AT1G66410	42.446	139	78	2	26	163	12	149	3.45e-30	108
MS.gene58860.t1	AT1G66410	41.096	73	43	0	93	165	6	78	1.47e-11	59.7
MS.gene58860.t1	AT5G21274	43.165	139	77	2	26	163	12	149	3.80e-30	107
MS.gene58860.t1	AT5G21274	41.096	73	43	0	93	165	6	78	1.60e-11	59.7
MS.gene58860.t1	AT3G56800	43.165	139	77	2	26	163	12	149	4.05e-30	107
MS.gene58860.t1	AT3G56800	41.096	73	43	0	93	165	6	78	1.67e-11	59.7
MS.gene58860.t1	AT2G27030	43.165	139	77	2	26	163	12	149	4.05e-30	107
MS.gene58860.t1	AT2G27030	41.096	73	43	0	93	165	6	78	1.67e-11	59.7
MS.gene58860.t1	AT2G41110	43.165	139	77	2	26	163	12	149	4.05e-30	107
MS.gene58860.t1	AT2G41110	41.096	73	43	0	93	165	6	78	1.67e-11	59.7
MS.gene58860.t1	AT2G27030	41.497	147	84	2	24	169	10	155	8.00e-30	108
MS.gene58860.t1	AT2G27030	41.096	73	43	0	93	165	6	78	3.84e-11	59.3
MS.gene58860.t1	AT3G43810	42.446	139	78	2	26	163	12	149	9.32e-30	107
MS.gene58860.t1	AT3G43810	41.096	73	43	0	93	165	6	78	1.52e-11	59.7
MS.gene58860.t1	AT2G15680	40.714	140	79	3	24	162	48	184	6.09e-29	105
MS.gene58860.t1	AT3G43810	41.429	140	80	2	24	162	10	148	4.29e-28	104
MS.gene58860.t1	AT3G43810	41.096	73	43	0	93	165	6	78	2.41e-11	60.5
MS.gene58860.t1	AT4G14640	41.912	136	77	2	26	160	13	147	5.55e-28	102
MS.gene58860.t1	AT5G17470	39.568	139	78	3	27	161	3	139	1.08e-27	101
MS.gene58860.t1	AT3G59440	38.509	161	88	4	4	162	37	188	2.58e-27	102
MS.gene58860.t1	AT3G22930	41.176	136	78	2	26	160	35	169	5.22e-27	100
MS.gene58860.t1	AT2G41110	39.735	151	77	3	26	163	12	161	6.14e-27	100
MS.gene58860.t1	AT1G05990	37.589	141	83	3	26	162	5	144	1.92e-26	98.6
MS.gene58860.t1	AT5G37780	37.821	156	80	3	24	163	10	164	5.42e-26	97.8
MS.gene58860.t1	AT2G36180	38.514	148	80	4	27	167	1	144	7.50e-26	96.7
MS.gene58860.t1	AT4G03290	36.806	144	84	3	23	160	2	144	1.55e-25	96.3
MS.gene58860.t1	AT3G07490	37.063	143	86	3	23	162	2	143	2.51e-25	95.5
MS.gene58860.t1	AT5G37780	41.600	125	71	2	40	163	13	136	1.01e-24	93.6
MS.gene58860.t1	AT1G66410	41.600	125	71	2	40	163	36	159	1.64e-24	93.6
MS.gene58860.t1	AT3G03400	39.695	131	73	4	27	153	6	134	1.76e-24	93.2
MS.gene58860.t1	AT5G37780	41.600	125	71	2	40	163	52	175	3.00e-24	93.6
MS.gene58860.t1	AT2G41090	38.194	144	86	2	24	167	10	150	4.90e-24	93.6
MS.gene58860.t1	AT4G12860	36.364	143	87	3	23	162	2	143	7.09e-24	92.0
MS.gene58860.t1	AT2G41410	34.911	169	98	5	9	167	48	214	1.41e-23	92.8
MS.gene58860.t1	AT4G14640	40.984	122	70	2	40	160	9	129	1.49e-23	90.5
MS.gene58860.t1	AT2G43290	36.552	145	83	4	26	162	65	208	5.22e-23	91.3
MS.gene58860.t1	AT1G66410	40.351	114	66	2	51	163	1	113	7.69e-22	85.5
MS.gene58860.t1	AT1G66410	40.351	114	66	2	51	163	1	113	7.69e-22	85.5
MS.gene58860.t1	AT3G10190	35.616	146	91	2	16	160	62	205	1.27e-21	87.4
MS.gene58860.t1	AT1G32250	32.877	146	90	2	24	162	14	158	1.36e-21	86.3
MS.gene58860.t1	AT3G43810	40.351	114	66	2	51	163	1	113	2.36e-21	84.3
MS.gene58860.t1	AT3G43810	40.351	114	66	2	51	163	1	113	2.36e-21	84.3
MS.gene58860.t1	AT3G50770	35.664	143	85	4	25	161	63	204	2.77e-20	84.0
MS.gene58860.t1	AT3G03000	33.333	153	94	5	15	162	8	157	6.13e-20	82.0
MS.gene58860.t1	AT5G42380	35.211	142	85	3	23	160	46	184	2.52e-19	80.9
MS.gene58860.t1	AT1G18530	30.216	139	93	2	26	161	7	144	1.40e-18	78.2
MS.gene58860.t1	AT2G41100	32.704	159	84	3	26	164	66	221	1.79e-18	80.9
MS.gene58860.t1	AT2G41100	32.704	159	84	3	26	164	66	221	1.79e-18	80.9
MS.gene58860.t1	AT2G41100	32.704	159	84	3	26	164	66	221	1.79e-18	80.9
MS.gene58860.t1	AT2G41100	32.704	159	84	3	26	164	101	256	2.77e-18	80.5
MS.gene58860.t1	AT2G41100	32.919	161	85	4	26	167	12	168	9.60e-18	79.3
MS.gene58860.t1	AT2G41100	32.704	159	84	3	26	164	101	256	2.77e-18	80.5
MS.gene58860.t1	AT2G41100	32.919	161	85	4	26	167	12	168	9.60e-18	79.3
MS.gene58860.t1	AT3G51920	31.429	140	94	2	24	162	10	148	6.53e-18	76.3
MS.gene58860.t1	AT5G44460	36.250	160	87	5	18	164	21	178	3.06e-17	75.5
MS.gene58860.t1	AT4G04740	35.714	140	84	3	23	160	370	505	4.26e-17	78.2
MS.gene58860.t1	AT4G04740	35.714	140	84	3	23	160	370	505	4.26e-17	78.2
MS.gene58860.t1	AT4G04740	35.714	140	84	3	23	160	370	505	4.26e-17	78.2
MS.gene58860.t1	AT4G04740	35.714	140	84	3	23	160	370	505	4.26e-17	78.2
MS.gene58860.t1	AT4G04740	35.714	140	84	3	23	160	370	505	4.26e-17	78.2
MS.gene58860.t1	AT4G04740	35.714	140	84	3	23	160	370	505	4.26e-17	78.2
MS.gene58860.t1	AT4G37010	32.857	140	84	3	26	160	27	161	5.91e-17	74.3
MS.gene58860.t1	AT4G37010	32.857	140	84	3	26	160	31	165	7.38e-17	74.3
MS.gene58860.t1	AT3G57530	36.296	135	82	3	27	160	369	500	1.52e-16	76.6
MS.gene58860.t1	AT4G04695	34.559	136	87	2	27	162	337	470	5.20e-16	75.1
MS.gene58860.t1	AT1G62820	33.333	141	84	4	27	163	14	148	9.24e-16	70.9
MS.gene58860.t1	AT1G12310	33.333	141	84	4	27	163	14	148	1.20e-15	70.5
MS.gene58860.t1	AT4G23650	34.328	134	86	2	27	160	384	515	1.56e-15	73.6
MS.gene58860.t1	AT1G76650	33.824	136	87	2	26	160	43	176	1.96e-15	70.5
MS.gene58860.t1	AT1G76650	33.824	136	87	2	26	160	43	176	1.96e-15	70.5
MS.gene58860.t1	AT4G20780	30.939	181	102	5	5	164	9	187	2.66e-15	70.5
MS.gene58860.t1	AT3G51850	31.159	138	94	1	23	160	356	492	2.92e-15	72.8
MS.gene58860.t1	AT1G61950	31.034	145	98	2	23	167	401	543	3.51e-15	72.8
MS.gene58860.t1	AT3G50360	32.857	140	84	3	26	160	27	161	4.36e-15	69.3
MS.gene58860.t1	AT3G50360	39.189	74	45	0	100	173	28	101	2.87e-13	64.7
MS.gene58860.t1	AT5G19360	34.328	134	86	2	27	160	374	505	5.23e-15	72.0
MS.gene58860.t1	AT4G04720	35.294	136	82	3	27	160	385	516	8.41e-15	71.6
MS.gene58860.t1	AT4G04720	35.294	136	82	3	27	160	385	516	8.41e-15	71.6
MS.gene58860.t1	AT4G04700	34.559	136	83	3	27	160	337	468	8.99e-15	71.6
MS.gene58860.t1	AT3G03410	30.657	137	86	2	28	164	4	131	1.23e-14	67.4
MS.gene58860.t1	AT2G41860	34.328	134	87	1	27	160	360	492	1.32e-14	70.9
MS.gene58860.t1	AT2G41860	34.328	134	87	1	27	160	360	492	1.36e-14	70.9
MS.gene58860.t1	AT4G21940	32.857	140	88	3	27	164	407	542	1.68e-14	70.9
MS.gene58860.t1	AT4G21940	32.857	140	88	3	27	164	407	542	1.72e-14	70.9
MS.gene58860.t1	AT1G21550	31.944	144	90	2	25	160	9	152	2.11e-14	67.4
MS.gene58860.t1	AT1G76040	32.836	134	88	2	27	160	179	310	4.09e-14	68.9
MS.gene58860.t1	AT1G76040	32.836	134	88	2	27	160	179	310	4.09e-14	68.9
MS.gene58860.t1	AT4G14640	37.113	97	59	2	26	121	13	108	5.43e-14	65.5
MS.gene58860.t1	AT4G38230	32.432	148	97	2	27	174	186	330	7.17e-14	68.6
MS.gene58860.t1	AT1G76040	32.836	134	88	2	27	160	417	548	7.32e-14	68.9
MS.gene58860.t1	AT5G12480	32.847	137	90	2	27	162	271	406	8.85e-14	68.6
MS.gene58860.t1	AT3G25600	26.950	141	99	2	24	161	10	149	9.02e-14	65.9
MS.gene58860.t1	AT5G12180	32.836	134	88	2	27	160	379	510	9.16e-14	68.6
MS.gene58860.t1	AT5G12480	32.847	137	90	2	27	162	365	500	9.64e-14	68.6
MS.gene58860.t1	AT1G76650	33.088	136	78	2	26	160	43	166	9.93e-14	65.9
MS.gene58860.t1	AT3G22930	37.500	96	58	2	26	120	35	129	1.02e-13	65.1
MS.gene58860.t1	AT4G38230	32.432	148	97	2	27	174	360	504	1.47e-13	68.2
MS.gene58860.t1	AT4G38230	32.432	148	97	2	27	174	330	474	1.51e-13	67.8
MS.gene58860.t1	AT4G38230	32.432	148	97	2	27	174	330	474	1.51e-13	67.8
MS.gene58860.t1	AT1G76640	31.159	138	91	2	26	160	22	158	1.77e-13	65.1
MS.gene58860.t1	AT3G10660	31.343	134	89	2	27	160	492	622	1.95e-13	67.8
MS.gene58860.t1	AT3G10660	31.343	134	89	2	27	160	492	622	1.95e-13	67.8
MS.gene58860.t1	AT3G20410	33.333	138	90	2	23	160	393	528	3.56e-13	67.0
MS.gene58860.t1	AT3G20410	33.333	138	90	2	23	160	393	528	3.56e-13	67.0
MS.gene58860.t1	AT5G04870	32.593	135	86	3	27	160	456	586	1.02e-12	65.5
MS.gene58860.t1	AT2G17290	32.450	151	96	3	27	174	391	538	1.36e-12	65.1
MS.gene58860.t1	AT2G17290	32.450	151	96	3	27	174	391	538	1.36e-12	65.1
MS.gene58860.t1	AT5G23580	32.090	134	88	2	27	160	328	458	1.56e-12	65.1
MS.gene58860.t1	AT1G50700	31.429	140	94	2	23	162	375	512	1.80e-12	64.7
MS.gene58860.t1	AT1G74740	32.168	143	94	3	21	162	359	499	2.12e-12	64.7
MS.gene58860.t1	AT3G03430	44.444	63	33	1	29	91	12	72	2.25e-12	60.1
MS.gene58860.t1	AT5G19450	31.618	136	93	0	27	162	363	498	4.66e-12	63.5
MS.gene58860.t1	AT5G19450	31.618	136	93	0	27	162	363	498	4.66e-12	63.5
MS.gene58860.t1	AT1G18890	30.769	143	96	3	21	162	363	503	7.14e-12	63.2
MS.gene58860.t1	AT1G35670	32.090	134	88	3	27	160	332	462	9.55e-12	62.8
MS.gene58860.t1	AT4G09570	32.090	134	88	3	27	160	331	461	1.06e-11	62.8
MS.gene58860.t1	AT2G41100	31.148	122	62	2	63	164	12	131	1.12e-11	60.8
MS.gene58860.t1	AT5G17480	46.667	60	30	1	29	88	12	69	4.36e-11	56.6
MS.gene58860.t1	AT3G01830	30.935	139	90	3	25	160	10	145	4.46e-11	58.2
MS.gene58860.t1	AT4G35310	31.126	151	98	3	27	174	403	550	8.95e-11	60.1
MS.gene58860.t1	AT4G35310	31.126	151	98	3	27	174	403	550	8.95e-11	60.1
MS.gene58860.t1	AT4G04710	30.597	134	91	2	27	160	338	469	9.33e-11	59.7
MS.gene58860.t1	AT4G04710	30.597	134	91	2	27	160	324	455	9.34e-11	59.7

Find 41 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCGGCAGAACGCGGCGAATT+CGG	0.292639	6.2:+78773577	None:intergenic
ACGGGTTCGTTTGTTGCCAT+TGG	0.337748	6.2:+78773824	None:intergenic
CGGCAGAACGCGGCGAATTC+GGG	0.362081	6.2:+78773578	None:intergenic
TTGATGAAACCGTCGTGGTC+GGG	0.402953	6.2:+78773605	None:intergenic
CTAATTAACAGATTCGTTAA+CGG	0.439981	6.2:+78773319	None:intergenic
AACGGTTTCGAGTTCGTTGA+CGG	0.458198	6.2:+78773694	None:intergenic
GTGGTGAAGGTGTTGGAGTC+GGG	0.476400	6.2:+78773786	None:intergenic
GGGTCGGATTCAACTGGAAC+GGG	0.482502	6.2:+78773806	None:intergenic
GGAGTCGGGTCGGATTCAAC+TGG	0.488321	6.2:+78773800	None:intergenic
GGATCTGAGTGTTCGGAGAA+CGG	0.493457	6.2:+78773676	None:intergenic
AGTGGTGAAGGTGTTGGAGT+CGG	0.498634	6.2:+78773785	None:intergenic
TTCAACAACTTCGACGCAAA+CGG	0.511287	6.2:-78773731	MS.gene58860:CDS
TGATGAAACCGTCGTGGTCG+GGG	0.513593	6.2:+78773606	None:intergenic
CATCTTGCACTGGATCGTCT+TGG	0.513604	6.2:-78773461	MS.gene58860:CDS
CCGAGGAGTGGTGAAGGTGT+TGG	0.525431	6.2:+78773779	None:intergenic
AACTTCGACGCAAACGGCGA+CGG	0.533145	6.2:-78773725	MS.gene58860:CDS
GTTGATGAAACCGTCGTGGT+CGG	0.536310	6.2:+78773604	None:intergenic
TTCTTCGTGTTGTGGTACGT+CGG	0.540260	6.2:+78773655	None:intergenic
TTCACCACTCCTCGGCGACA+TGG	0.543332	6.2:-78773771	MS.gene58860:CDS
GTACGTCGGATCTGAGTGTT+CGG	0.545867	6.2:+78773669	None:intergenic
TGAAGAGCTTCATCTTGCAC+TGG	0.547507	6.2:-78773471	MS.gene58860:CDS
ATCGCCGCCGTCGGTAGTGT+CGG	0.552642	6.2:+78773553	None:intergenic
CGTCGGAGTTCTTCGTGTTG+TGG	0.552939	6.2:+78773647	None:intergenic
TCGTCCATGTCGCCGAGGAG+TGG	0.561055	6.2:+78773767	None:intergenic
ATGTCGCCGAGGAGTGGTGA+AGG	0.569574	6.2:+78773773	None:intergenic
TGAGTTCTTGCATGACGCGT+CGG	0.585587	6.2:+78773630	None:intergenic
ATTAAATCTGTTGATTCTGA+CGG	0.599831	6.2:-78773404	MS.gene58860:CDS
TGAAGGTGTTGGAGTCGGGT+CGG	0.603289	6.2:+78773790	None:intergenic
AAGAGCTGAATCGCCGCCGT+CGG	0.603533	6.2:+78773544	None:intergenic
TGGAATGAAGTGTTCCGTTG+AGG	0.607616	6.2:-78773441	MS.gene58860:CDS
CGGGTCGGATTCAACTGGAA+CGG	0.613287	6.2:+78773805	None:intergenic
TCTGTTGATTCTGACGGTGA+CGG	0.619111	6.2:-78773398	MS.gene58860:CDS
AGTGTCGGAGCGGCAGAACG+CGG	0.649477	6.2:+78773568	None:intergenic
CCAACACCTTCACCACTCCT+CGG	0.650197	6.2:-78773779	MS.gene58860:CDS
CGCCGTCGGTAGTGTCGGAG+CGG	0.653897	6.2:+78773558	None:intergenic
CATCTCATGACATTCCTCAA+CGG	0.668312	6.2:+78773427	None:intergenic
CGCTCCGACACTACCGACGG+CGG	0.677401	6.2:-78773557	MS.gene58860:CDS
TGCCGCTCCGACACTACCGA+CGG	0.677523	6.2:-78773560	MS.gene58860:CDS
TGAGTTCGTCCATGTCGCCG+AGG	0.697339	6.2:+78773762	None:intergenic
GTAAGTTGATGAAACCGTCG+TGG	0.715924	6.2:+78773600	None:intergenic
GAACTCAGCCCCGACCACGA+CGG	0.723930	6.2:-78773614	MS.gene58860:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CTAATTAACAGATTCGTTAA+CGG	+	chr6.2:78773824-78773843	None:intergenic	25.0%
!!!	ATTAAATCTGTTGATTCTGA+CGG	-	chr6.2:78773736-78773755	MS.gene58860:CDS	25.0%
	CTGTACGATAAAGACAAAAA+CGG	-	chr6.2:78773634-78773653	MS.gene58860:CDS	30.0%
	CATCTCATGACATTCCTCAA+CGG	+	chr6.2:78773716-78773735	None:intergenic	40.0%
	TTCAACAACTTCGACGCAAA+CGG	-	chr6.2:78773409-78773428	MS.gene58860:CDS	40.0%
	TGAAGAGCTTCATCTTGCAC+TGG	-	chr6.2:78773669-78773688	MS.gene58860:CDS	45.0%
	TTCTTCGTGTTGTGGTACGT+CGG	+	chr6.2:78773488-78773507	None:intergenic	45.0%
!	TGGAATGAAGTGTTCCGTTG+AGG	-	chr6.2:78773699-78773718	MS.gene58860:CDS	45.0%
!!	AACGGTTTCGAGTTCGTTGA+CGG	+	chr6.2:78773449-78773468	None:intergenic	45.0%
!!	GTAAGTTGATGAAACCGTCG+TGG	+	chr6.2:78773543-78773562	None:intergenic	45.0%
!!	TCTGTTGATTCTGACGGTGA+CGG	-	chr6.2:78773742-78773761	MS.gene58860:CDS	45.0%
	CATCTTGCACTGGATCGTCT+TGG	-	chr6.2:78773679-78773698	MS.gene58860:CDS	50.0%
	GGATCTGAGTGTTCGGAGAA+CGG	+	chr6.2:78773467-78773486	None:intergenic	50.0%
	GTACGTCGGATCTGAGTGTT+CGG	+	chr6.2:78773474-78773493	None:intergenic	50.0%
	TGAGTTCTTGCATGACGCGT+CGG	+	chr6.2:78773513-78773532	None:intergenic	50.0%
	TTGATGAAACCGTCGTGGTC+GGG	+	chr6.2:78773538-78773557	None:intergenic	50.0%
!	GTTGATGAAACCGTCGTGGT+CGG	+	chr6.2:78773539-78773558	None:intergenic	50.0%
!!	AGTGGTGAAGGTGTTGGAGT+CGG	+	chr6.2:78773358-78773377	None:intergenic	50.0%
	AACTTCGACGCAAACGGCGA+CGG	-	chr6.2:78773415-78773434	MS.gene58860:CDS	55.0%
	CCAACACCTTCACCACTCCT+CGG	-	chr6.2:78773361-78773380	MS.gene58860:CDS	55.0%
	CGGGTCGGATTCAACTGGAA+CGG	+	chr6.2:78773338-78773357	None:intergenic	55.0%
	CGTCGGAGTTCTTCGTGTTG+TGG	+	chr6.2:78773496-78773515	None:intergenic	55.0%
	GGGTCGGATTCAACTGGAAC+GGG	+	chr6.2:78773337-78773356	None:intergenic	55.0%
	TGATGAAACCGTCGTGGTCG+GGG	+	chr6.2:78773537-78773556	None:intergenic	55.0%
!!	GTGGTGAAGGTGTTGGAGTC+GGG	+	chr6.2:78773357-78773376	None:intergenic	55.0%
!!	TGAAGGTGTTGGAGTCGGGT+CGG	+	chr6.2:78773353-78773372	None:intergenic	55.0%
	AAGAGCTGAATCGCCGCCGT+CGG	+	chr6.2:78773599-78773618	None:intergenic	60.0%
	ATGTCGCCGAGGAGTGGTGA+AGG	+	chr6.2:78773370-78773389	None:intergenic	60.0%
	GGAGTCGGGTCGGATTCAAC+TGG	+	chr6.2:78773343-78773362	None:intergenic	60.0%
	TGAGTTCGTCCATGTCGCCG+AGG	+	chr6.2:78773381-78773400	None:intergenic	60.0%
	TTCACCACTCCTCGGCGACA+TGG	-	chr6.2:78773369-78773388	MS.gene58860:CDS	60.0%
!	CCGAGGAGTGGTGAAGGTGT+TGG	+	chr6.2:78773364-78773383	None:intergenic	60.0%
	ATCGCCGCCGTCGGTAGTGT+CGG	+	chr6.2:78773590-78773609	None:intergenic	65.0%
	CGGCAGAACGCGGCGAATTC+GGG	+	chr6.2:78773565-78773584	None:intergenic	65.0%
	GAACTCAGCCCCGACCACGA+CGG	-	chr6.2:78773526-78773545	MS.gene58860:CDS	65.0%
	GCGGCAGAACGCGGCGAATT+CGG	+	chr6.2:78773566-78773585	None:intergenic	65.0%
	TCGTCCATGTCGCCGAGGAG+TGG	+	chr6.2:78773376-78773395	None:intergenic	65.0%
	TGCCGCTCCGACACTACCGA+CGG	-	chr6.2:78773580-78773599	MS.gene58860:CDS	65.0%
!	AGTGTCGGAGCGGCAGAACG+CGG	+	chr6.2:78773575-78773594	None:intergenic	65.0%
	CGCTCCGACACTACCGACGG+CGG	-	chr6.2:78773583-78773602	MS.gene58860:CDS	70.0%
!	CGCCGTCGGTAGTGTCGGAG+CGG	+	chr6.2:78773585-78773604	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	78773319	78773843	78773319	ID=MS.gene58860
chr6.2	mRNA	78773319	78773843	78773319	ID=MS.gene58860.t1;Parent=MS.gene58860
chr6.2	exon	78773319	78773843	78773319	ID=MS.gene58860.t1.exon1;Parent=MS.gene58860.t1
chr6.2	CDS	78773319	78773843	78773319	ID=cds.MS.gene58860.t1;Parent=MS.gene58860.t1

Gene Sequence

>MS.gene58860

ATGGCAACAAACGAACCCGTTCCAGTTGAATCCGACCCGACTCCAACACCTTCACCACTCCTCGGCGACATGGACGAACTCAAAAAAGTCTTCAACAACTTCGACGCAAACGGCGACGGCAAGATCTCCGTCAACGAACTCGAAACCGTTCTCCGAACACTCAGATCCGACGTACCACAACACGAAGAACTCCGACGCGTCATGCAAGAACTCAGCCCCGACCACGACGGTTTCATCAACTTACCCGAATTCGCCGCGTTCTGCCGCTCCGACACTACCGACGGCGGCGATTCAGCTCTTCGTGATGCGTTCGATCTGTACGATAAAGACAAAAACGGACTCATTTCAACTGAAGAGCTTCATCTTGCACTGGATCGTCTTGGAATGAAGTGTTCCGTTGAGGAATGTCATGAGATGATTAAATCTGTTGATTCTGACGGTGACGGTAGTGTTAACTTTGAAGAATTCAAGAAGATGATGACAGCGAAAGTCAAGACTCACACCGTTAACGAATCTGTTAATTAG

Protein sequence

>MS.gene58860.t1

MATNEPVPVESDPTPTPSPLLGDMDELKKVFNNFDANGDGKISVNELETVLRTLRSDVPQHEELRRVMQELSPDHDGFINLPEFAAFCRSDTTDGGDSALRDAFDLYDKDKNGLISTEELHLALDRLGMKCSVEECHEMIKSVDSDGDGSVNFEEFKKMMTAKVKTHTVNESVN