AlfalfaGEDB | MS.gene94551

M. sativa cultivar XinJiangDaYe / MS.gene94551

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94551.t1	XP_003631098.1	98.2	56	0	1	1	55	1	56	6.90E-19	104

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94551.t1	G7LDC5	98.2	56	0	1	1	55	1	56	5.0e-19	104.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049358	MS.gene94551	0.81637	5.73E-52	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene94551	MS.gene21931	PPI
MS.gene94551	MS.gene64314	PPI
MS.gene94551	MS.gene53659	PPI
MS.gene94551	MS.gene09960	PPI
MS.gene21932	MS.gene94551	PPI
MS.gene94551	MS.gene47134	PPI
MS.gene94551	MS.gene017446	PPI
MS.gene022455	MS.gene94551	PPI
MS.gene94551	MS.gene53650	PPI
MS.gene87673	MS.gene94551	PPI
MS.gene05284	MS.gene94551	PPI
MS.gene94551	MS.gene02545	PPI
MS.gene94551	MS.gene96913	PPI
MS.gene041795	MS.gene94551	PPI
MS.gene63000	MS.gene94551	PPI
MS.gene94551	MS.gene057167	PPI
MS.gene94551	MS.gene93763	PPI
MS.gene80011	MS.gene94551	PPI
MS.gene96914	MS.gene94551	PPI
MS.gene94551	MS.gene80012	PPI
MS.gene94551	MS.gene49270	PPI
MS.gene53648	MS.gene94551	PPI
MS.gene070168	MS.gene94551	PPI
MS.gene017446	MS.gene94551	PPI
MS.gene038456	MS.gene94551	PPI
MS.gene052672	MS.gene94551	PPI
MS.gene94551	MS.gene29794	PPI
MS.gene74452	MS.gene94551	PPI
MS.gene004899	MS.gene94551	PPI
MS.gene94551	MS.gene71511	PPI
MS.gene94551	MS.gene033361	PPI
MS.gene94551	MS.gene98972	PPI
MS.gene25186	MS.gene94551	PPI
MS.gene009021	MS.gene94551	PPI
MS.gene94551	MS.gene061768	PPI
MS.gene94551	MS.gene89216	PPI
MS.gene020515	MS.gene94551	PPI
MS.gene94551	MS.gene47195	PPI
MS.gene070167	MS.gene94551	PPI
MS.gene94551	MS.gene96914	PPI
MS.gene94551	MS.gene066862	PPI
MS.gene04915	MS.gene94551	PPI
MS.gene94551	MS.gene060446	PPI
MS.gene94551	MS.gene07422	PPI
MS.gene64327	MS.gene94551	PPI
MS.gene074100	MS.gene94551	PPI
MS.gene94551	MS.gene64316	PPI
MS.gene63281	MS.gene94551	PPI
MS.gene94551	MS.gene98294	PPI
MS.gene68345	MS.gene94551	PPI
MS.gene066863	MS.gene94551	PPI
MS.gene036930	MS.gene94551	PPI
MS.gene001246	MS.gene94551	PPI
MS.gene040127	MS.gene94551	PPI
MS.gene62258	MS.gene94551	PPI
MS.gene94551	MS.gene026618	PPI
MS.gene55545	MS.gene94551	PPI
MS.gene000724	MS.gene94551	PPI
MS.gene94551	MS.gene008831	PPI
MS.gene64311	MS.gene94551	PPI
MS.gene94551	MS.gene056461	PPI
MS.gene94551	MS.gene64310	PPI
MS.gene94551	MS.gene29459	PPI
MS.gene040331	MS.gene94551	PPI
MS.gene94551	MS.gene71207	PPI
MS.gene58906	MS.gene94551	PPI
MS.gene94551	MS.gene35562	PPI
MS.gene036915	MS.gene94551	PPI
MS.gene58860	MS.gene94551	PPI
MS.gene64313	MS.gene94551	PPI
MS.gene83068	MS.gene94551	PPI
MS.gene27516	MS.gene94551	PPI
MS.gene62689	MS.gene94551	PPI
MS.gene053319	MS.gene94551	PPI
MS.gene97948	MS.gene94551	PPI
MS.gene61009	MS.gene94551	PPI
MS.gene000738	MS.gene94551	PPI
MS.gene64307	MS.gene94551	PPI
MS.gene061261	MS.gene94551	PPI
MS.gene04917	MS.gene94551	PPI
MS.gene94551	MS.gene21696	PPI
MS.gene062239	MS.gene94551	PPI
MS.gene46886	MS.gene94551	PPI
MS.gene94551	MS.gene29793	PPI
MS.gene026530	MS.gene94551	PPI
MS.gene92789	MS.gene94551	PPI
MS.gene94551	MS.gene074045	PPI
MS.gene94551	MS.gene03228	PPI
MS.gene94551	MS.gene85596	PPI
MS.gene013748	MS.gene94551	PPI
MS.gene94551	MS.gene46237	PPI
MS.gene94551	MS.gene64317	PPI
MS.gene28338	MS.gene94551	PPI
MS.gene65954	MS.gene94551	PPI
MS.gene008225	MS.gene94551	PPI
MS.gene056383	MS.gene94551	PPI
MS.gene94551	MS.gene93087	PPI
MS.gene94551	MS.gene046988	PPI
MS.gene64324	MS.gene94551	PPI
MS.gene011400	MS.gene94551	PPI
MS.gene94551	MS.gene057293	PPI
MS.gene015470	MS.gene94551	PPI
MS.gene015658	MS.gene94551	PPI
MS.gene94551	MS.gene09934	PPI
MS.gene024717	MS.gene94551	PPI
MS.gene27529	MS.gene94551	PPI
MS.gene64308	MS.gene94551	PPI
MS.gene22553	MS.gene94551	PPI
MS.gene53662	MS.gene94551	PPI
MS.gene94551	MS.gene79028	PPI
MS.gene35563	MS.gene94551	PPI
MS.gene55496	MS.gene94551	PPI
MS.gene003880	MS.gene94551	PPI
MS.gene54637	MS.gene94551	PPI
MS.gene49271	MS.gene94551	PPI
MS.gene67281	MS.gene94551	PPI
MS.gene62540	MS.gene94551	PPI
MS.gene016268	MS.gene94551	PPI
MS.gene025777	MS.gene94551	PPI
MS.gene94551	MS.gene026940	PPI
MS.gene94551	MS.gene98295	PPI
MS.gene94551	MS.gene022456	PPI
MS.gene94551	MS.gene96922	PPI
MS.gene21155	MS.gene94551	PPI
MS.gene94551	MS.gene80013	PPI
MS.gene92775	MS.gene94551	PPI
MS.gene94551	MS.gene025797	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94551.t1	MTR_8g107110	95.238	168	4	2	1	167	1	165	1.61e-112	317
MS.gene94551.t1	MTR_6g079570	68.125	160	47	2	1	156	1	160	3.00e-70	210
MS.gene94551.t1	MTR_5g079340	58.519	135	56	0	22	156	3	137	2.28e-49	156
MS.gene94551.t1	MTR_3g067610	53.571	140	62	1	20	159	2	138	9.78e-48	152
MS.gene94551.t1	MTR_1g046950	56.522	138	57	2	22	156	3	140	9.93e-46	147
MS.gene94551.t1	MTR_1g047100	53.285	137	62	1	22	156	3	139	2.14e-45	146
MS.gene94551.t1	MTR_1g032070	46.835	158	75	3	7	160	32	184	6.76e-38	129
MS.gene94551.t1	MTR_5g008705	50.394	127	62	1	31	156	2	128	2.33e-34	117
MS.gene94551.t1	MTR_8g105230	46.970	132	69	1	23	153	36	167	2.61e-33	117
MS.gene94551.t1	MTR_8g105230	42.857	63	36	0	93	155	34	96	3.88e-11	59.3
MS.gene94551.t1	MTR_4g067270	44.681	141	75	2	20	157	2	142	5.46e-33	114
MS.gene94551.t1	MTR_1g041285	47.407	135	70	1	23	156	12	146	6.49e-33	114
MS.gene94551.t1	MTR_1g076650	47.015	134	70	1	24	156	13	146	3.34e-32	112
MS.gene94551.t1	MTR_7g087610	43.704	135	75	1	23	156	12	146	4.40e-32	112
MS.gene94551.t1	MTR_7g087610	43.284	67	38	0	90	156	7	73	1.45e-11	59.3
MS.gene94551.t1	MTR_6g025320	44.444	135	74	1	23	156	12	146	5.35e-32	112
MS.gene94551.t1	MTR_6g025320	43.284	67	38	0	90	156	7	73	1.78e-11	59.3
MS.gene94551.t1	MTR_5g088320	44.444	135	74	1	23	156	12	146	5.90e-32	112
MS.gene94551.t1	MTR_5g088320	43.284	67	38	0	90	156	7	73	1.96e-11	59.3
MS.gene94551.t1	MTR_7g075040	42.515	167	83	6	5	161	32	195	8.54e-30	108
MS.gene94551.t1	MTR_7g089760	40.000	140	81	2	20	156	2	141	1.37e-29	106
MS.gene94551.t1	MTR_4g086260	38.889	144	87	1	16	159	50	192	3.02e-29	106
MS.gene94551.t1	MTR_5g017550	38.411	151	92	1	8	158	34	183	5.30e-29	105
MS.gene94551.t1	MTR_3g089070	38.931	131	80	0	27	157	10	140	3.00e-28	102
MS.gene94551.t1	MTR_3g089090	38.931	131	80	0	27	157	9	139	3.33e-28	102
MS.gene94551.t1	MTR_6g023460	40.769	130	77	0	27	156	12	141	5.76e-28	101
MS.gene94551.t1	MTR_4g103650	39.259	135	82	0	23	157	2	136	1.09e-27	100
MS.gene94551.t1	MTR_5g008695	49.107	112	54	1	47	155	1	112	1.32e-27	100
MS.gene94551.t1	MTR_4g115170	39.665	179	87	4	3	162	46	222	3.25e-27	102
MS.gene94551.t1	MTR_4g103630	39.259	135	82	0	23	157	6	140	4.95e-27	99.4
MS.gene94551.t1	MTR_5g017510	38.406	138	84	1	22	158	47	184	6.44e-27	100
MS.gene94551.t1	MTR_5g017560	38.406	138	84	1	22	158	47	184	6.44e-27	100
MS.gene94551.t1	MTR_8g036075	41.958	143	74	3	23	156	49	191	1.14e-26	100
MS.gene94551.t1	MTR_4g103655	38.519	135	83	0	23	157	6	140	3.62e-26	97.1
MS.gene94551.t1	MTR_8g066630	33.803	142	90	1	21	158	15	156	4.43e-26	97.8
MS.gene94551.t1	MTR_2g098890	39.860	143	81	2	20	157	61	203	4.67e-26	99.0
MS.gene94551.t1	MTR_0168s0120	44.545	110	60	1	48	156	1	110	1.89e-24	92.0
MS.gene94551.t1	MTR_6g025320	44.545	110	60	1	48	156	1	110	1.89e-24	92.0
MS.gene94551.t1	MTR_1g071150	35.036	137	89	0	23	159	12	148	3.73e-22	87.0
MS.gene94551.t1	MTR_7g115040	40.741	135	79	1	23	156	12	146	2.47e-21	85.1
MS.gene94551.t1	MTR_4g112460	32.192	146	96	2	14	156	2	147	2.62e-21	85.5
MS.gene94551.t1	MTR_7g090450	37.589	141	82	3	23	157	73	213	3.46e-21	86.3
MS.gene94551.t1	MTR_7g074020	35.294	136	87	1	23	157	30	165	4.44e-21	85.1
MS.gene94551.t1	MTR_8g069915	34.307	137	87	2	23	156	12	148	1.39e-20	83.6
MS.gene94551.t1	MTR_8g078270	33.121	157	96	2	1	156	39	187	3.28e-20	83.2
MS.gene94551.t1	MTR_6g007613	34.307	137	89	1	23	158	29	165	4.25e-20	82.4
MS.gene94551.t1	MTR_5g027000	33.588	131	86	1	24	153	23	153	1.54e-19	80.5
MS.gene94551.t1	MTR_3g083470	33.582	134	80	2	23	156	93	217	1.76e-19	82.0
MS.gene94551.t1	MTR_7g091890	36.567	134	85	0	24	157	364	497	2.57e-19	84.3
MS.gene94551.t1	MTR_3g051770	36.000	150	86	3	24	165	389	536	4.48e-19	83.6
MS.gene94551.t1	MTR_5g092810	33.793	145	95	1	20	164	394	537	1.35e-18	82.4
MS.gene94551.t1	MTR_1g054865	32.847	137	90	1	24	160	467	601	3.60e-18	80.9
MS.gene94551.t1	MTR_1g041150	33.333	138	88	2	24	160	424	558	2.42e-17	78.6
MS.gene94551.t1	MTR_8g095440	33.094	139	87	2	24	160	336	470	3.15e-17	78.2
MS.gene94551.t1	MTR_4g132070	32.867	143	91	2	24	164	397	536	6.04e-17	77.4
MS.gene94551.t1	MTR_7g074020	33.333	120	79	1	23	141	30	149	1.40e-16	72.8
MS.gene94551.t1	MTR_7g074020	41.270	63	37	0	94	156	29	91	8.22e-11	57.8
MS.gene94551.t1	MTR_1g026190	33.333	135	85	2	24	156	388	519	1.63e-16	76.3
MS.gene94551.t1	MTR_5g009830	34.532	139	86	2	24	160	372	507	1.91e-16	75.9
MS.gene94551.t1	MTR_1g052530	34.586	133	87	0	24	156	358	490	1.96e-16	75.9
MS.gene94551.t1	MTR_4g107490	29.801	151	104	2	18	167	373	522	2.42e-16	75.9
MS.gene94551.t1	MTR_1g096490	32.877	146	92	2	24	167	336	477	2.45e-16	75.9
MS.gene94551.t1	MTR_1g055255	32.609	138	89	2	24	160	430	564	3.37e-16	75.5
MS.gene94551.t1	MTR_7g068710	29.054	148	105	0	20	167	358	505	8.11e-16	74.3
MS.gene94551.t1	MTR_5g099240	35.036	137	87	1	24	160	402	536	9.96e-16	73.9
MS.gene94551.t1	MTR_5g079470	50.746	67	32	1	20	86	7	72	1.20e-15	68.6
MS.gene94551.t1	MTR_6g007613	32.500	120	80	1	23	141	29	148	1.38e-15	70.1
MS.gene94551.t1	MTR_6g007613	41.270	63	37	0	94	156	28	90	7.10e-11	57.8
MS.gene94551.t1	MTR_1g030440	33.103	145	80	3	23	156	22	160	1.42e-15	70.5
MS.gene94551.t1	MTR_5g089320	32.117	137	92	1	24	160	374	509	1.48e-15	73.6
MS.gene94551.t1	MTR_5g011850	31.387	137	85	3	24	156	13	144	2.43e-15	69.3
MS.gene94551.t1	MTR_7g074240	33.333	147	85	4	24	157	25	171	3.54e-15	69.7
MS.gene94551.t1	MTR_7g106710	33.566	143	91	2	24	165	441	580	3.68e-15	72.4
MS.gene94551.t1	MTR_8g099095	33.094	139	88	2	24	160	372	507	3.83e-15	72.4
MS.gene94551.t1	MTR_0028s0170	32.117	137	92	1	24	160	384	519	4.50e-15	72.0
MS.gene94551.t1	MTR_5g099240	35.036	137	87	1	24	160	330	464	2.55e-14	69.7
MS.gene94551.t1	MTR_4g066660	29.932	147	102	1	21	167	375	520	5.84e-14	68.9
MS.gene94551.t1	MTR_3g055570	32.836	134	76	1	21	154	50	169	2.52e-13	64.7
MS.gene94551.t1	MTR_3g088655	32.026	153	79	5	23	156	8	154	3.51e-13	63.9
MS.gene94551.t1	MTR_3g098090	29.496	139	92	2	24	160	338	472	2.05e-12	64.3
MS.gene94551.t1	MTR_3g098070	29.496	139	92	2	24	160	335	469	2.32e-12	64.3
MS.gene94551.t1	MTR_3g055585	29.630	135	81	1	21	155	50	170	2.34e-12	62.0
MS.gene94551.t1	MTR_4g132040	30.070	143	95	2	24	164	401	540	5.79e-12	63.2
MS.gene94551.t1	MTR_3g055520	29.630	135	81	1	21	155	50	170	2.04e-11	59.7
MS.gene94551.t1	MTR_3g055510	25.157	159	92	4	10	162	2	139	3.88e-11	58.2
MS.gene94551.t1	MTR_7g011010	45.455	66	34	1	95	158	134	199	4.91e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene94551.t1	AT1G18210	58.065	155	61	2	2	156	3	153	2.03e-60	185
MS.gene94551.t1	AT1G18210	58.065	155	61	2	2	156	3	153	2.03e-60	185
MS.gene94551.t1	AT1G73630	58.710	155	59	3	4	158	3	152	8.02e-57	176
MS.gene94551.t1	AT5G37770	54.110	146	62	1	18	158	12	157	1.43e-44	144
MS.gene94551.t1	AT5G37770	54.110	146	62	1	18	158	12	157	1.43e-44	144
MS.gene94551.t1	AT1G66400	50.000	142	68	1	18	156	10	151	1.21e-42	139
MS.gene94551.t1	AT1G24620	50.000	138	68	1	20	156	34	171	1.81e-40	135
MS.gene94551.t1	AT2G15680	43.972	141	76	2	21	160	48	186	1.94e-35	122
MS.gene94551.t1	AT4G14640	44.079	152	79	2	8	158	3	149	2.34e-33	115
MS.gene94551.t1	AT5G21274	45.185	135	73	1	23	156	12	146	2.23e-32	113
MS.gene94551.t1	AT5G21274	43.284	67	38	0	90	156	7	73	1.99e-11	59.3
MS.gene94551.t1	AT5G37780	44.444	135	74	1	23	156	12	146	2.38e-32	113
MS.gene94551.t1	AT5G37780	43.284	67	38	0	90	156	7	73	2.28e-11	58.9
MS.gene94551.t1	AT1G66410	44.444	135	74	1	23	156	12	146	2.38e-32	113
MS.gene94551.t1	AT1G66410	43.284	67	38	0	90	156	7	73	2.28e-11	58.9
MS.gene94551.t1	AT3G56800	45.185	135	73	1	23	156	12	146	2.77e-32	113
MS.gene94551.t1	AT3G56800	43.284	67	38	0	90	156	7	73	2.03e-11	59.3
MS.gene94551.t1	AT2G27030	45.185	135	73	1	23	156	12	146	2.77e-32	113
MS.gene94551.t1	AT2G27030	43.284	67	38	0	90	156	7	73	2.03e-11	59.3
MS.gene94551.t1	AT2G41110	45.185	135	73	1	23	156	12	146	2.77e-32	113
MS.gene94551.t1	AT2G41110	43.284	67	38	0	90	156	7	73	2.03e-11	59.3
MS.gene94551.t1	AT3G43810	44.444	135	74	1	23	156	12	146	5.60e-32	112
MS.gene94551.t1	AT3G43810	43.284	67	38	0	90	156	7	73	1.87e-11	59.3
MS.gene94551.t1	AT2G27030	44.526	137	75	1	21	156	10	146	6.98e-32	113
MS.gene94551.t1	AT2G27030	43.284	67	38	0	90	156	7	73	4.03e-11	58.9
MS.gene94551.t1	AT1G05990	40.816	147	83	2	20	162	2	148	1.70e-31	111
MS.gene94551.t1	AT3G43810	43.262	141	79	1	21	160	10	150	2.93e-31	112
MS.gene94551.t1	AT3G43810	43.284	67	38	0	90	156	7	73	8.25e-11	58.5
MS.gene94551.t1	AT5G17470	41.429	140	77	2	27	162	6	144	1.39e-30	108
MS.gene94551.t1	AT4G03290	37.931	145	84	2	20	158	2	146	2.86e-30	108
MS.gene94551.t1	AT3G07490	38.411	151	90	2	20	167	2	152	4.33e-30	107
MS.gene94551.t1	AT3G22930	44.203	138	76	1	23	159	35	172	4.89e-30	108
MS.gene94551.t1	AT2G41110	41.497	147	73	2	23	156	12	158	4.74e-29	105
MS.gene94551.t1	AT3G59440	35.443	158	94	2	5	160	39	190	3.74e-28	103
MS.gene94551.t1	AT4G14640	45.528	123	66	1	37	158	9	131	4.40e-28	102
MS.gene94551.t1	AT5G37780	40.000	150	74	2	23	156	12	161	5.12e-28	102
MS.gene94551.t1	AT2G36180	40.972	144	81	2	24	163	1	144	1.07e-27	101
MS.gene94551.t1	AT4G12860	37.748	151	91	2	20	167	2	152	1.78e-27	100
MS.gene94551.t1	AT3G03400	42.308	130	70	3	24	149	6	134	4.62e-27	99.4
MS.gene94551.t1	AT2G43290	37.013	154	89	3	20	165	62	215	4.78e-27	101
MS.gene94551.t1	AT2G41090	39.007	141	84	1	21	161	10	148	8.78e-27	100
MS.gene94551.t1	AT5G37780	43.802	121	67	1	37	156	13	133	1.49e-26	98.2
MS.gene94551.t1	AT1G66410	43.802	121	67	1	37	156	36	156	2.07e-26	98.6
MS.gene94551.t1	AT1G32250	34.483	145	88	1	21	158	14	158	2.65e-26	98.2
MS.gene94551.t1	AT5G37780	37.267	161	74	2	23	156	12	172	3.15e-26	98.2
MS.gene94551.t1	AT3G10190	38.686	137	82	2	23	157	70	206	3.98e-26	99.0
MS.gene94551.t1	AT1G66410	44.545	110	60	1	48	156	1	110	7.30e-25	93.2
MS.gene94551.t1	AT1G66410	44.545	110	60	1	48	156	1	110	7.30e-25	93.2
MS.gene94551.t1	AT3G43810	44.545	110	60	1	48	156	1	110	1.98e-24	92.0
MS.gene94551.t1	AT3G43810	44.545	110	60	1	48	156	1	110	1.98e-24	92.0
MS.gene94551.t1	AT5G42380	38.129	139	84	1	21	157	47	185	1.41e-23	91.7
MS.gene94551.t1	AT3G50770	36.620	142	82	3	22	156	63	203	2.81e-23	91.7
MS.gene94551.t1	AT3G51920	35.036	137	88	1	21	156	10	146	8.96e-23	89.0
MS.gene94551.t1	AT1G18530	33.803	142	81	2	23	156	7	143	4.34e-22	87.0
MS.gene94551.t1	AT3G51850	31.690	142	97	0	20	161	356	497	4.94e-21	89.4
MS.gene94551.t1	AT3G50360	34.307	137	89	1	23	158	27	163	1.29e-20	83.6
MS.gene94551.t1	AT2G41410	34.483	145	91	3	23	163	70	214	2.73e-20	84.0
MS.gene94551.t1	AT4G37010	34.074	135	88	1	23	156	31	165	1.13e-19	81.3
MS.gene94551.t1	AT4G04740	37.778	135	79	2	24	156	374	505	1.21e-19	85.1
MS.gene94551.t1	AT4G04740	37.778	135	79	2	24	156	374	505	1.21e-19	85.1
MS.gene94551.t1	AT4G04740	37.778	135	79	2	24	156	374	505	1.21e-19	85.1
MS.gene94551.t1	AT4G04740	37.778	135	79	2	24	156	374	505	1.21e-19	85.1
MS.gene94551.t1	AT4G04740	37.778	135	79	2	24	156	374	505	1.21e-19	85.1
MS.gene94551.t1	AT4G04740	37.778	135	79	2	24	156	374	505	1.21e-19	85.1
MS.gene94551.t1	AT4G37010	34.074	135	88	1	23	156	27	161	1.27e-19	81.3
MS.gene94551.t1	AT2G41100	33.125	160	89	2	23	164	12	171	1.37e-19	84.0
MS.gene94551.t1	AT2G41100	33.108	148	81	1	23	152	101	248	7.43e-19	82.0
MS.gene94551.t1	AT2G41100	33.125	160	89	2	23	164	12	171	1.37e-19	84.0
MS.gene94551.t1	AT2G41100	33.108	148	81	1	23	152	101	248	7.43e-19	82.0
MS.gene94551.t1	AT2G41860	34.783	138	90	0	24	161	360	497	3.36e-19	84.0
MS.gene94551.t1	AT2G41860	34.783	138	90	0	24	161	360	497	3.70e-19	84.0
MS.gene94551.t1	AT2G41100	33.108	148	81	1	23	152	66	213	5.09e-19	82.0
MS.gene94551.t1	AT2G41100	30.882	136	76	2	47	164	1	136	9.62e-13	64.7
MS.gene94551.t1	AT2G41100	33.108	148	81	1	23	152	66	213	5.09e-19	82.0
MS.gene94551.t1	AT2G41100	30.882	136	76	2	47	164	1	136	9.62e-13	64.7
MS.gene94551.t1	AT2G41100	33.108	148	81	1	23	152	66	213	5.09e-19	82.0
MS.gene94551.t1	AT2G41100	30.882	136	76	2	47	164	1	136	9.62e-13	64.7
MS.gene94551.t1	AT5G19360	35.766	137	87	1	24	160	374	509	8.95e-19	82.8
MS.gene94551.t1	AT4G04695	37.063	143	87	3	24	165	337	477	1.08e-18	82.4
MS.gene94551.t1	AT3G57530	35.075	134	86	1	28	161	373	505	1.13e-18	82.4
MS.gene94551.t1	AT4G04720	37.143	140	81	4	24	160	385	520	1.47e-18	82.0
MS.gene94551.t1	AT4G04720	37.143	140	81	4	24	160	385	520	1.47e-18	82.0
MS.gene94551.t1	AT4G21940	37.681	138	79	4	24	158	407	540	1.53e-18	82.0
MS.gene94551.t1	AT4G21940	37.681	138	79	4	24	158	407	540	1.67e-18	82.0
MS.gene94551.t1	AT3G03000	33.557	149	95	2	14	158	9	157	2.97e-18	77.4
MS.gene94551.t1	AT5G44460	38.776	147	77	4	24	157	29	175	3.43e-18	77.8
MS.gene94551.t1	AT5G12180	35.036	137	88	1	24	160	379	514	4.69e-18	80.9
MS.gene94551.t1	AT1G61950	33.094	139	92	1	20	158	401	538	1.32e-17	79.3
MS.gene94551.t1	AT4G14640	40.000	110	60	2	8	116	3	107	1.89e-17	74.3
MS.gene94551.t1	AT1G76040	34.752	141	87	2	24	162	179	316	2.57e-17	77.8
MS.gene94551.t1	AT1G76040	34.752	141	87	2	24	162	179	316	2.57e-17	77.8
MS.gene94551.t1	AT5G12480	34.815	135	87	1	24	157	271	405	2.82e-17	78.2
MS.gene94551.t1	AT1G76040	35.766	137	83	2	24	158	417	550	3.63e-17	78.2
MS.gene94551.t1	AT5G12480	33.103	145	96	1	24	167	365	509	4.05e-17	78.2
MS.gene94551.t1	AT2G17290	36.496	137	85	1	24	160	391	525	4.11e-17	78.2
MS.gene94551.t1	AT2G17290	36.496	137	85	1	24	160	391	525	4.11e-17	78.2
MS.gene94551.t1	AT4G20780	35.065	154	79	3	24	156	30	183	5.46e-17	74.7
MS.gene94551.t1	AT3G25600	30.216	139	94	1	21	156	10	148	5.85e-17	73.9
MS.gene94551.t1	AT1G76650	32.593	135	91	0	23	157	43	177	8.74e-17	73.9
MS.gene94551.t1	AT1G76650	32.593	135	91	0	23	157	43	177	8.74e-17	73.9
MS.gene94551.t1	AT4G23650	33.813	139	87	2	24	160	384	519	9.62e-17	77.0
MS.gene94551.t1	AT5G19450	34.328	134	87	1	24	156	363	496	1.30e-16	76.6
MS.gene94551.t1	AT5G19450	34.328	134	87	1	24	156	363	496	1.30e-16	76.6
MS.gene94551.t1	AT3G20410	33.562	146	92	2	20	163	393	535	1.33e-16	76.6
MS.gene94551.t1	AT3G20410	33.562	146	92	2	20	163	393	535	1.33e-16	76.6
MS.gene94551.t1	AT4G04700	36.111	144	85	4	24	164	337	476	2.05e-16	75.9
MS.gene94551.t1	AT1G50700	31.507	146	95	2	20	163	375	517	2.11e-16	75.9
MS.gene94551.t1	AT1G62820	32.117	137	84	4	24	156	14	145	3.19e-16	71.6
MS.gene94551.t1	AT1G12310	32.117	137	84	4	24	156	14	145	6.57e-16	70.9
MS.gene94551.t1	AT3G22930	41.053	95	55	1	23	116	35	129	6.59e-16	70.5
MS.gene94551.t1	AT3G22930	43.077	65	37	0	95	159	35	99	5.26e-11	57.8
MS.gene94551.t1	AT4G38230	36.090	133	83	1	24	156	360	490	1.13e-15	73.9
MS.gene94551.t1	AT1G76640	30.657	137	92	1	24	157	23	159	1.29e-15	70.5
MS.gene94551.t1	AT4G35310	34.307	137	88	1	24	160	403	537	2.08e-15	73.2
MS.gene94551.t1	AT4G35310	34.307	137	88	1	24	160	403	537	2.08e-15	73.2
MS.gene94551.t1	AT3G51850	30.894	123	85	0	20	142	356	478	2.26e-15	73.2
MS.gene94551.t1	AT1G74740	30.657	137	95	0	20	156	361	497	2.63e-15	72.8
MS.gene94551.t1	AT3G10660	32.090	134	87	2	24	156	492	622	3.13e-15	72.8
MS.gene94551.t1	AT3G10660	32.090	134	87	2	24	156	492	622	3.13e-15	72.8
MS.gene94551.t1	AT5G23580	33.333	135	88	1	24	158	328	460	5.57e-15	72.0
MS.gene94551.t1	AT3G03410	31.061	132	83	2	25	156	4	127	8.10e-15	67.8
MS.gene94551.t1	AT1G76650	31.852	135	82	1	23	157	43	167	8.12e-15	68.6
MS.gene94551.t1	AT1G18890	29.927	137	96	0	20	156	365	501	2.58e-14	70.1
MS.gene94551.t1	AT4G09570	33.577	137	89	2	24	160	331	465	3.63e-14	69.7
MS.gene94551.t1	AT4G38230	35.556	135	85	1	24	158	186	318	4.85e-14	68.9
MS.gene94551.t1	AT4G38230	35.294	136	86	1	24	159	330	463	7.04e-14	68.6
MS.gene94551.t1	AT4G38230	35.294	136	86	1	24	159	330	463	7.04e-14	68.6
MS.gene94551.t1	AT2G31500	30.435	138	93	2	27	161	375	512	7.10e-14	68.6
MS.gene94551.t1	AT5G04870	31.343	134	88	2	24	156	456	586	7.82e-14	68.6
MS.gene94551.t1	AT1G35670	32.847	137	90	2	24	160	332	466	1.19e-13	68.2
MS.gene94551.t1	AT1G21550	35.172	145	81	5	23	156	10	152	1.39e-13	65.1
MS.gene94551.t1	AT1G50700	27.326	172	94	4	20	163	375	543	1.54e-13	67.8
MS.gene94551.t1	AT3G03430	46.667	60	31	1	27	86	13	71	7.62e-13	61.2
MS.gene94551.t1	AT5G17480	50.000	58	28	1	27	84	13	69	1.11e-12	60.8
MS.gene94551.t1	AT3G01830	30.000	140	91	3	22	157	10	146	3.17e-12	61.2
MS.gene94551.t1	AT2G41100	31.405	121	65	1	50	152	3	123	4.23e-12	62.0
MS.gene94551.t1	AT4G04740	34.711	121	74	2	24	142	374	491	5.13e-12	63.2
MS.gene94551.t1	AT2G38910	29.927	137	90	2	24	158	440	572	9.57e-12	62.4
MS.gene94551.t1	AT4G04710	31.111	135	92	1	24	158	338	471	1.48e-11	62.0
MS.gene94551.t1	AT4G04710	31.111	135	92	1	24	158	324	457	1.78e-11	61.6
MS.gene94551.t1	AT4G04710	31.111	135	92	1	24	158	351	484	2.17e-11	61.6

Find 52 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAAAATGCCTAATTGCTAT+TGG	0.334630	4.1:-409881	None:intergenic
GTGGTGGTAGTTTCAGTGTT+TGG	0.361160	4.1:-409403	None:intergenic
ACACGCTGAAGCTCGTCCTT+AGG	0.380697	4.1:-409556	None:intergenic
TAATCAAGCCAATAGCAATT+AGG	0.386571	4.1:+409873	MS.gene94551:CDS
ACCAAGGTAAACAGAGGATT+TGG	0.387128	4.1:-409425	None:intergenic
CACGCTGAAGCTCGTCCTTA+GGG	0.450425	4.1:-409555	None:intergenic
GACAACATCCTCCGCTCCCT+CGG	0.457675	4.1:+409523	MS.gene94551:CDS
CTCTGTTTACCTTGGTGACA+TGG	0.477447	4.1:+409432	MS.gene94551:CDS
ATCTGCAACAGAACTCTGTC+AGG	0.479021	4.1:+409723	MS.gene94551:CDS
TGTCGCTCTGGCTCCGCCGA+CGG	0.479256	4.1:+409640	MS.gene94551:CDS
GGAGATCTTGCCGTCGCCGT+TGG	0.484522	4.1:-409488	None:intergenic
TTCGCCGCCTTCTGTCGCTC+TGG	0.486663	4.1:+409628	MS.gene94551:CDS
GGTAGTTTCAGTGTTTGGAT+TGG	0.496656	4.1:-409398	None:intergenic
CGCTTTGACACCAACGGCGA+CGG	0.502369	4.1:+409478	MS.gene94551:CDS
CTGTGGATCCGAGGGAGCGG+AGG	0.507387	4.1:-409531	None:intergenic
AGAGTTCTGTTGCAGATATG+AGG	0.511848	4.1:-409717	None:intergenic
GTCGCCGTTGGTGTCAAAGC+GGG	0.513809	4.1:-409476	None:intergenic
GTCCTTGTCGTACAGATCAA+AGG	0.524229	4.1:-409686	None:intergenic
GGACTGTGGATCCGAGGGAG+CGG	0.526161	4.1:-409534	None:intergenic
CATGTTGTGGCATTCTTCAA+CGG	0.531855	4.1:-409773	None:intergenic
ACCAAATCCTCTGTTTACCT+TGG	0.535920	4.1:+409424	MS.gene94551:CDS
CCTCGGATCCACAGTCCCTA+AGG	0.538554	4.1:+409540	MS.gene94551:CDS
GGAGCCAGAGCGACAGAAGG+CGG	0.539883	4.1:-409632	None:intergenic
CAACGGATTTAATCATGTTG+TGG	0.548092	4.1:-409786	None:intergenic
AACCGTCGTGGTCGGTGTCA+AGG	0.551083	4.1:-409588	None:intergenic
CAAGATCTCCGTCACCGAGT+TGG	0.554785	4.1:+409501	MS.gene94551:CDS
GGTGTCAAAGCGGGTGAAGA+CGG	0.559763	4.1:-409467	None:intergenic
CCTTAGGGACTGTGGATCCG+AGG	0.560391	4.1:-409540	None:intergenic
TGTCAGGTGCTGAACACGCT+CGG	0.561922	4.1:+409739	MS.gene94551:CDS
GGACGAGCTTCAGCGTGTCA+TGG	0.570764	4.1:+409561	MS.gene94551:CDS
AAGGTAAACAGAGGATTTGG+TGG	0.587552	4.1:-409422	None:intergenic
ATTAAATCCGTTGATTCTGA+TGG	0.588476	4.1:+409796	MS.gene94551:CDS
GTTGATGAAACCGTCGTGGT+CGG	0.589277	4.1:-409596	None:intergenic
CTCTGAAGCATCACCGTCGG+CGG	0.589333	4.1:-409653	None:intergenic
GGCGGAGCCAGAGCGACAGA+AGG	0.593592	4.1:-409635	None:intergenic
TTCACCCGCTTTGACACCAA+CGG	0.595563	4.1:+409472	MS.gene94551:CDS
CTTAGGGACTGTGGATCCGA+GGG	0.600721	4.1:-409539	None:intergenic
GCGGAGGATGTTGTCCAACT+CGG	0.603566	4.1:-409515	None:intergenic
TCCGTTGATTCTGATGGTGA+CGG	0.606109	4.1:+409802	MS.gene94551:CDS
GTAAACAGAGGATTTGGTGG+TGG	0.607876	4.1:-409419	None:intergenic
GATGTTGTCCAACTCGGTGA+CGG	0.608041	4.1:-409509	None:intergenic
ACCGTCACCATCAGAATCAA+CGG	0.621270	4.1:-409803	None:intergenic
CTGTACGACAAGGACAAGAA+CGG	0.624259	4.1:+409694	MS.gene94551:CDS
AAGCTCGTCCTTAGGGACTG+TGG	0.630754	4.1:-409548	None:intergenic
AAGCTCTGAAGCATCACCGT+CGG	0.642996	4.1:-409656	None:intergenic
CGTCGCCGTTGGTGTCAAAG+CGG	0.673460	4.1:-409477	None:intergenic
AGAAGGCGGCGAACTCAGCG+AGG	0.689075	4.1:-409618	None:intergenic
AGCCTTTGATCTGTACGACA+AGG	0.692386	4.1:+409684	MS.gene94551:CDS
CATGTCACCAAGGTAAACAG+AGG	0.695210	4.1:-409431	None:intergenic
GACCTTGACACCGACCACGA+CGG	0.706107	4.1:+409586	MS.gene94551:CDS
CGAGGTTGATGAAACCGTCG+TGG	0.708586	4.1:-409600	None:intergenic
TCAATTCGTCCATGTCACCA+AGG	0.709352	4.1:-409441	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAATCCGTTGATTCTGA+TGG	+	chr4.1:409796-409815	MS.gene94551:CDS	30.0%
!	CAACGGATTTAATCATGTTG+TGG	-	chr4.1:409789-409808	None:intergenic	35.0%
	AAGGTAAACAGAGGATTTGG+TGG	-	chr4.1:409425-409444	None:intergenic	40.0%
	ACCAAATCCTCTGTTTACCT+TGG	+	chr4.1:409424-409443	MS.gene94551:CDS	40.0%
	ACCAAGGTAAACAGAGGATT+TGG	-	chr4.1:409428-409447	None:intergenic	40.0%
	AGAGTTCTGTTGCAGATATG+AGG	-	chr4.1:409720-409739	None:intergenic	40.0%
	CATGTTGTGGCATTCTTCAA+CGG	-	chr4.1:409776-409795	None:intergenic	40.0%
	GGTAGTTTCAGTGTTTGGAT+TGG	-	chr4.1:409401-409420	None:intergenic	40.0%
	ACCGTCACCATCAGAATCAA+CGG	-	chr4.1:409806-409825	None:intergenic	45.0%
	AGCCTTTGATCTGTACGACA+AGG	+	chr4.1:409684-409703	MS.gene94551:CDS	45.0%
	ATCTGCAACAGAACTCTGTC+AGG	+	chr4.1:409723-409742	MS.gene94551:CDS	45.0%
	CATGTCACCAAGGTAAACAG+AGG	-	chr4.1:409434-409453	None:intergenic	45.0%
	CTGTACGACAAGGACAAGAA+CGG	+	chr4.1:409694-409713	MS.gene94551:CDS	45.0%
	GTCCTTGTCGTACAGATCAA+AGG	-	chr4.1:409689-409708	None:intergenic	45.0%
	GTGGTGGTAGTTTCAGTGTT+TGG	-	chr4.1:409406-409425	None:intergenic	45.0%
	TCAATTCGTCCATGTCACCA+AGG	-	chr4.1:409444-409463	None:intergenic	45.0%
!	CTCTGTTTACCTTGGTGACA+TGG	+	chr4.1:409432-409451	MS.gene94551:CDS	45.0%
!!	GTAAACAGAGGATTTGGTGG+TGG	-	chr4.1:409422-409441	None:intergenic	45.0%
!!	TCCGTTGATTCTGATGGTGA+CGG	+	chr4.1:409802-409821	MS.gene94551:CDS	45.0%
	TTCACCCGCTTTGACACCAA+CGG	+	chr4.1:409472-409491	MS.gene94551:CDS	50.0%
!	GATGTTGTCCAACTCGGTGA+CGG	-	chr4.1:409512-409531	None:intergenic	50.0%
!	GTTGATGAAACCGTCGTGGT+CGG	-	chr4.1:409599-409618	None:intergenic	50.0%
!!	AAGCTCTGAAGCATCACCGT+CGG	-	chr4.1:409659-409678	None:intergenic	50.0%
	AAGCTCGTCCTTAGGGACTG+TGG	-	chr4.1:409551-409570	None:intergenic	55.0%
	ACACGCTGAAGCTCGTCCTT+AGG	-	chr4.1:409559-409578	None:intergenic	55.0%
	CAAGATCTCCGTCACCGAGT+TGG	+	chr4.1:409501-409520	MS.gene94551:CDS	55.0%
	CACGCTGAAGCTCGTCCTTA+GGG	-	chr4.1:409558-409577	None:intergenic	55.0%
	CTTAGGGACTGTGGATCCGA+GGG	-	chr4.1:409542-409561	None:intergenic	55.0%
	GCGGAGGATGTTGTCCAACT+CGG	-	chr4.1:409518-409537	None:intergenic	55.0%
	GGTGTCAAAGCGGGTGAAGA+CGG	-	chr4.1:409470-409489	None:intergenic	55.0%
!!	CGAGGTTGATGAAACCGTCG+TGG	-	chr4.1:409603-409622	None:intergenic	55.0%
!!	TGTCAGGTGCTGAACACGCT+CGG	+	chr4.1:409739-409758	MS.gene94551:CDS	55.0%
	CCTCGGATCCACAGTCCCTA+AGG	+	chr4.1:409540-409559	MS.gene94551:CDS	60.0%
	CCTTAGGGACTGTGGATCCG+AGG	-	chr4.1:409543-409562	None:intergenic	60.0%
	CGCTTTGACACCAACGGCGA+CGG	+	chr4.1:409478-409497	MS.gene94551:CDS	60.0%
	GACAACATCCTCCGCTCCCT+CGG	+	chr4.1:409523-409542	MS.gene94551:CDS	60.0%
	GACCTTGACACCGACCACGA+CGG	+	chr4.1:409586-409605	MS.gene94551:CDS	60.0%
	GGACGAGCTTCAGCGTGTCA+TGG	+	chr4.1:409561-409580	MS.gene94551:CDS	60.0%
!!	AACCGTCGTGGTCGGTGTCA+AGG	-	chr4.1:409591-409610	None:intergenic	60.0%
!!	CGTCGCCGTTGGTGTCAAAG+CGG	-	chr4.1:409480-409499	None:intergenic	60.0%
!!	CTCTGAAGCATCACCGTCGG+CGG	-	chr4.1:409656-409675	None:intergenic	60.0%
!!	GTCGCCGTTGGTGTCAAAGC+GGG	-	chr4.1:409479-409498	None:intergenic	60.0%
	AGAAGGCGGCGAACTCAGCG+AGG	-	chr4.1:409621-409640	None:intergenic	65.0%
	GGACTGTGGATCCGAGGGAG+CGG	-	chr4.1:409537-409556	None:intergenic	65.0%
	GGAGATCTTGCCGTCGCCGT+TGG	-	chr4.1:409491-409510	None:intergenic	65.0%
	GGAGCCAGAGCGACAGAAGG+CGG	-	chr4.1:409635-409654	None:intergenic	65.0%
	TTCGCCGCCTTCTGTCGCTC+TGG	+	chr4.1:409628-409647	MS.gene94551:CDS	65.0%
	CTGTGGATCCGAGGGAGCGG+AGG	-	chr4.1:409534-409553	None:intergenic	70.0%
	GGCGGAGCCAGAGCGACAGA+AGG	-	chr4.1:409638-409657	None:intergenic	70.0%
!	TGTCGCTCTGGCTCCGCCGA+CGG	+	chr4.1:409640-409659	MS.gene94551:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	409391	409894	409391	ID=MS.gene94551
chr4.1	mRNA	409391	409894	409391	ID=MS.gene94551.t1;Parent=MS.gene94551
chr4.1	exon	409391	409894	409391	ID=MS.gene94551.t1.exon1;Parent=MS.gene94551.t1
chr4.1	CDS	409391	409894	409391	ID=cds.MS.gene94551.t1;Parent=MS.gene94551.t1

Gene Sequence

>MS.gene94551

ATGGCAACCAATCCAAACACTGAAACTACCACCACCAAATCCTCTGTTTACCTTGGTGACATGGACGAATTGAAGACCGTCTTCACCCGCTTTGACACCAACGGCGACGGCAAGATCTCCGTCACCGAGTTGGACAACATCCTCCGCTCCCTCGGATCCACAGTCCCTAAGGACGAGCTTCAGCGTGTCATGGAAGACCTTGACACCGACCACGACGGTTTCATCAACCTCGCTGAGTTCGCCGCCTTCTGTCGCTCTGGCTCCGCCGACGGTGATGCTTCAGAGCTTCACGAAGCCTTTGATCTGTACGACAAGGACAAGAACGGCCTCATATCTGCAACAGAACTCTGTCAGGTGCTGAACACGCTCGGAATGAAGTGCTCCGTTGAAGAATGCCACAACATGATTAAATCCGTTGATTCTGATGGTGACGGTAACGTTAACTTTGAAGAGTTTAAGAAGATGATGAACAATAATAATAATAATCAAGCCAATAGCAATTAG

Protein sequence

>MS.gene94551.t1

MATNPNTETTTTKSSVYLGDMDELKTVFTRFDTNGDGKISVTELDNILRSLGSTVPKDELQRVMEDLDTDHDGFINLAEFAAFCRSGSADGDASELHEAFDLYDKDKNGLISATELCQVLNTLGMKCSVEECHNMIKSVDSDGDGNVNFEEFKKMMNNNNNNQANSN