AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070168

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070168.t1 MTR_8g105230 96.053 152 5 1 1 152 1 151 3.80e-98 283
MS.gene070168.t1 MTR_1g032070 62.805 164 44 4 3 152 1 161 2.36e-62 192
MS.gene070168.t1 MTR_3g067610 51.282 117 51 2 38 152 4 116 5.07e-32 113
MS.gene070168.t1 MTR_3g083470 48.333 120 51 2 33 152 90 198 5.10e-28 105
MS.gene070168.t1 MTR_5g079340 48.182 110 56 1 42 151 9 117 1.78e-26 99.4
MS.gene070168.t1 MTR_7g087610 46.364 110 59 0 42 151 17 126 1.90e-24 94.4
MS.gene070168.t1 MTR_5g088320 46.364 110 59 0 42 151 17 126 1.17e-23 92.4
MS.gene070168.t1 MTR_6g025320 46.364 110 59 0 42 151 17 126 1.26e-23 92.4
MS.gene070168.t1 MTR_1g076650 44.545 110 61 0 42 151 17 126 7.70e-23 90.1
MS.gene070168.t1 MTR_4g086260 34.615 156 90 2 6 151 16 169 8.27e-23 91.3
MS.gene070168.t1 MTR_1g046950 41.593 113 64 1 41 151 8 120 9.29e-23 89.7
MS.gene070168.t1 MTR_8g107110 42.857 119 65 2 35 151 20 137 2.57e-22 89.4
MS.gene070168.t1 MTR_5g027000 41.818 110 64 0 42 151 27 136 4.08e-22 88.6
MS.gene070168.t1 MTR_1g041285 44.860 107 59 0 45 151 20 126 1.12e-21 87.0
MS.gene070168.t1 MTR_1g047100 39.474 114 62 2 42 151 9 119 1.17e-21 87.0
MS.gene070168.t1 MTR_4g067270 42.373 118 65 2 36 151 5 121 6.18e-21 85.1
MS.gene070168.t1 MTR_7g075040 37.419 155 87 5 6 151 17 170 2.22e-20 85.1
MS.gene070168.t1 MTR_5g017550 35.811 148 86 4 11 151 16 161 3.86e-20 84.3
MS.gene070168.t1 MTR_6g079570 41.270 126 62 4 33 151 20 140 2.84e-19 81.6
MS.gene070168.t1 MTR_5g017510 40.179 112 63 3 42 151 53 162 3.27e-18 79.0
MS.gene070168.t1 MTR_5g017560 40.179 112 63 3 42 151 53 162 3.27e-18 79.0
MS.gene070168.t1 MTR_8g036075 40.157 127 65 5 34 151 47 171 7.89e-18 78.2
MS.gene070168.t1 MTR_8g078270 40.000 135 77 4 18 151 36 167 1.65e-17 77.4
MS.gene070168.t1 MTR_6g023460 39.091 110 66 1 42 151 13 121 1.84e-17 75.9
MS.gene070168.t1 MTR_7g090450 37.931 116 67 3 42 152 78 193 3.15e-17 77.0
MS.gene070168.t1 MTR_0168s0120 45.556 90 49 0 62 151 1 90 1.13e-16 73.2
MS.gene070168.t1 MTR_6g025320 45.556 90 49 0 62 151 1 90 1.13e-16 73.2
MS.gene070168.t1 MTR_4g103650 40.187 107 63 1 45 151 10 115 4.53e-16 72.0
MS.gene070168.t1 MTR_4g103630 39.252 107 64 1 45 151 14 119 4.92e-16 72.0
MS.gene070168.t1 MTR_4g103655 39.252 107 64 1 45 151 14 119 5.47e-16 72.0
MS.gene070168.t1 MTR_5g008705 32.710 107 72 0 45 151 2 108 7.78e-16 71.2
MS.gene070168.t1 MTR_3g089070 35.398 113 72 1 39 151 8 119 1.58e-15 70.9
MS.gene070168.t1 MTR_7g089760 40.336 119 68 2 35 151 4 121 1.68e-15 70.9
MS.gene070168.t1 MTR_3g089090 35.398 113 72 1 39 151 7 118 1.92e-15 70.5
MS.gene070168.t1 MTR_7g074020 33.636 110 73 0 42 151 35 144 2.56e-15 70.9
MS.gene070168.t1 MTR_6g007613 32.353 136 87 2 20 151 9 143 3.39e-15 70.5
MS.gene070168.t1 MTR_7g074020 33.636 110 73 0 42 151 35 144 3.65e-15 70.5
MS.gene070168.t1 MTR_2g098890 32.927 164 99 4 1 154 23 185 4.08e-15 71.2
MS.gene070168.t1 MTR_6g007613 32.353 136 87 2 20 151 9 143 5.03e-15 70.1
MS.gene070168.t1 MTR_8g066630 37.815 119 70 2 36 151 17 134 9.81e-15 69.3
MS.gene070168.t1 MTR_4g112460 31.159 138 80 4 36 159 11 147 1.99e-13 65.9
MS.gene070168.t1 MTR_1g071150 35.780 109 63 2 46 151 21 125 3.87e-13 64.7
MS.gene070168.t1 MTR_1g071150 41.096 73 42 1 25 97 73 144 5.79e-12 61.6
MS.gene070168.t1 MTR_5g008695 33.333 93 60 1 61 151 1 93 1.79e-12 62.0
MS.gene070168.t1 MTR_5g079470 50.847 59 28 1 39 97 12 69 3.85e-12 60.5
MS.gene070168.t1 MTR_8g069915 31.858 113 75 1 42 152 17 129 8.60e-12 61.6
MS.gene070168.t1 MTR_5g011850 32.381 105 69 1 42 146 17 119 3.09e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070168.t1 AT1G24620 55.263 152 61 2 8 152 1 152 4.92e-50 161
MS.gene070168.t1 AT1G18210 46.281 121 60 2 36 156 23 138 5.01e-25 96.7
MS.gene070168.t1 AT1G18210 46.281 121 60 2 36 156 23 138 5.01e-25 96.7
MS.gene070168.t1 AT1G66400 39.669 121 69 2 35 151 11 131 1.75e-24 94.7
MS.gene070168.t1 AT5G37780 47.273 110 58 0 42 151 17 126 3.30e-24 94.0
MS.gene070168.t1 AT1G66410 47.273 110 58 0 42 151 17 126 3.30e-24 94.0
MS.gene070168.t1 AT5G21274 47.273 110 58 0 42 151 17 126 5.87e-24 93.2
MS.gene070168.t1 AT1G73630 44.444 117 60 2 36 152 20 131 9.46e-24 93.2
MS.gene070168.t1 AT5G37770 42.982 114 61 1 42 151 22 135 9.49e-24 92.8
MS.gene070168.t1 AT5G37770 42.982 114 61 1 42 151 22 135 9.49e-24 92.8
MS.gene070168.t1 AT3G43810 46.364 110 59 0 42 151 17 126 1.32e-23 92.4
MS.gene070168.t1 AT3G56800 46.364 110 59 0 42 151 17 126 1.37e-23 92.0
MS.gene070168.t1 AT2G27030 46.364 110 59 0 42 151 17 126 1.37e-23 92.0
MS.gene070168.t1 AT2G41110 46.364 110 59 0 42 151 17 126 1.37e-23 92.0
MS.gene070168.t1 AT2G27030 46.364 110 59 0 42 151 17 126 1.49e-23 93.2
MS.gene070168.t1 AT3G43810 46.364 110 59 0 42 151 17 126 2.31e-23 93.2
MS.gene070168.t1 AT4G14640 43.925 107 60 0 45 151 21 127 1.88e-22 89.4
MS.gene070168.t1 AT3G22930 44.860 107 59 0 45 151 43 149 1.10e-21 87.8
MS.gene070168.t1 AT2G41100 42.969 128 54 3 42 151 71 197 6.07e-21 88.6
MS.gene070168.t1 AT2G41100 42.969 128 54 3 42 151 71 197 6.07e-21 88.6
MS.gene070168.t1 AT2G41100 42.969 128 54 3 42 151 71 197 6.07e-21 88.6
MS.gene070168.t1 AT2G15680 38.393 112 63 2 42 151 55 162 6.12e-21 86.3
MS.gene070168.t1 AT2G15680 48.214 56 29 0 42 97 126 181 3.26e-11 60.5
MS.gene070168.t1 AT2G41110 41.803 122 59 1 42 151 17 138 6.43e-21 85.5
MS.gene070168.t1 AT5G37780 46.535 101 54 0 51 151 13 113 7.40e-21 84.7
MS.gene070168.t1 AT2G41100 42.969 128 54 3 42 151 106 232 9.71e-21 88.6
MS.gene070168.t1 AT2G41100 35.714 126 65 2 42 151 17 142 1.63e-17 79.7
MS.gene070168.t1 AT2G41100 42.969 128 54 3 42 151 106 232 9.71e-21 88.6
MS.gene070168.t1 AT2G41100 35.714 126 65 2 42 151 17 142 1.63e-17 79.7
MS.gene070168.t1 AT1G66410 46.535 101 54 0 51 151 36 136 1.27e-20 84.7
MS.gene070168.t1 AT5G37780 46.535 101 54 0 51 151 52 152 1.28e-20 85.1
MS.gene070168.t1 AT5G37780 46.535 101 54 0 51 151 41 141 1.45e-20 84.7
MS.gene070168.t1 AT2G43290 42.276 123 63 3 36 151 65 186 2.38e-20 85.5
MS.gene070168.t1 AT4G14640 42.574 101 58 0 51 151 9 109 2.68e-19 80.5
MS.gene070168.t1 AT3G50360 31.293 147 95 3 5 151 1 141 5.27e-19 80.9
MS.gene070168.t1 AT3G59440 38.000 150 87 5 1 149 19 163 5.71e-19 81.3
MS.gene070168.t1 AT1G05990 43.697 119 63 3 36 151 5 122 2.88e-18 78.2
MS.gene070168.t1 AT4G03290 40.870 115 63 2 42 151 10 124 3.83e-18 78.2
MS.gene070168.t1 AT4G14640 43.678 87 49 0 45 131 21 107 6.27e-18 76.6
MS.gene070168.t1 AT2G41410 40.171 117 65 4 42 154 75 190 1.04e-17 78.6
MS.gene070168.t1 AT5G17470 35.088 114 70 2 41 151 6 118 1.08e-17 76.6
MS.gene070168.t1 AT3G22930 44.828 87 48 0 45 131 43 129 2.04e-17 75.5
MS.gene070168.t1 AT1G66410 46.667 90 48 0 62 151 1 90 2.90e-17 74.7
MS.gene070168.t1 AT1G66410 46.667 90 48 0 62 151 1 90 2.90e-17 74.7
MS.gene070168.t1 AT4G12860 42.857 119 65 2 35 151 4 121 2.97e-17 75.9
MS.gene070168.t1 AT3G43810 45.556 90 49 0 62 151 1 90 1.19e-16 73.2
MS.gene070168.t1 AT3G43810 45.556 90 49 0 62 151 1 90 1.19e-16 73.2
MS.gene070168.t1 AT3G10190 39.130 115 63 4 42 152 75 186 2.04e-16 74.7
MS.gene070168.t1 AT3G50770 35.948 153 81 5 7 151 40 183 2.87e-16 74.3
MS.gene070168.t1 AT4G37010 31.343 134 87 2 18 151 17 145 1.71e-15 71.6
MS.gene070168.t1 AT4G37010 31.343 134 87 2 18 151 13 141 1.90e-15 71.2
MS.gene070168.t1 AT5G42380 39.286 112 65 2 42 151 54 164 3.46e-15 70.9
MS.gene070168.t1 AT3G03430 57.143 56 23 1 42 97 14 68 1.56e-14 66.6
MS.gene070168.t1 AT1G32250 36.220 127 64 3 36 151 16 136 3.87e-14 67.8
MS.gene070168.t1 AT3G07490 37.500 112 68 1 42 151 10 121 1.10e-13 66.2
MS.gene070168.t1 AT2G41100 41.667 108 44 3 62 151 1 107 1.42e-13 67.0
MS.gene070168.t1 AT2G41100 50.000 54 27 0 42 95 71 124 8.01e-11 59.3
MS.gene070168.t1 AT3G03400 30.973 113 76 1 41 151 9 121 2.27e-13 65.1
MS.gene070168.t1 AT2G41090 39.785 93 53 1 42 134 17 106 2.43e-12 63.5
MS.gene070168.t1 AT1G76650 33.913 115 75 1 39 153 45 158 4.44e-12 62.4
MS.gene070168.t1 AT1G76650 33.913 115 75 1 39 153 45 158 4.44e-12 62.4
MS.gene070168.t1 AT5G17480 51.786 56 26 1 42 97 14 68 4.69e-12 60.1
MS.gene070168.t1 AT1G62820 33.333 105 68 1 42 146 18 120 5.64e-12 61.6
MS.gene070168.t1 AT3G25600 29.204 113 78 1 41 151 16 128 7.48e-12 61.6
MS.gene070168.t1 AT3G03000 44.262 61 34 0 39 99 96 156 1.13e-11 61.2
MS.gene070168.t1 AT2G36180 31.858 113 74 1 42 151 5 117 2.76e-11 59.7
MS.gene070168.t1 AT2G41100 50.000 54 27 0 42 95 17 70 3.56e-11 59.3
MS.gene070168.t1 AT1G18530 31.034 116 70 3 42 151 12 123 3.88e-11 59.7
MS.gene070168.t1 AT1G18530 47.458 59 31 0 42 100 87 145 4.08e-11 59.3
MS.gene070168.t1 AT1G12310 32.673 101 66 1 42 142 18 116 5.08e-11 58.9
MS.gene070168.t1 AT1G76640 34.483 116 72 2 39 151 24 138 5.87e-11 58.9

Find 57 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTCATGGTTCCCAAATT+TGG 0.084307 3.2:-42261587 MS.gene070168:CDS
ACAAAGCCCAGGCCCAAATT+TGG 0.229641 3.2:+42261574 None:intergenic
ATCAGAACTCGGATCCATTA+TGG 0.229796 3.2:-42261983 MS.gene070168:CDS
GCCTCATGGTTCCCAAATTT+GGG 0.265815 3.2:-42261586 MS.gene070168:CDS
ATGGTTCCCAAATTTGGGCC+TGG 0.293726 3.2:-42261581 MS.gene070168:CDS
TTGACCTAAGCTTCCCATAA+TGG 0.330693 3.2:+42261969 None:intergenic
TGGTTCCCAAATTTGGGCCT+GGG 0.364350 3.2:-42261580 MS.gene070168:CDS
CAAAGCCCAGGCCCAAATTT+GGG 0.367791 3.2:+42261575 None:intergenic
CGTTGATTCTGATGAGATCT+TGG 0.387320 3.2:-42261845 MS.gene070168:CDS
CACCGTCTCCGTCGACTTCA+CGG 0.400923 3.2:+42261914 None:intergenic
CACGTTGTTGAGTTCTTGCT+CGG 0.422818 3.2:+42261939 None:intergenic
CTCATCAGAATCAACGCCTT+TGG 0.436220 3.2:+42261852 None:intergenic
AATGCTCGTTGGCGGAGTGC+TGG 0.437234 3.2:-42261726 MS.gene070168:CDS
CACGGAGAGGGAGGTAGATC+GGG 0.437490 3.2:+42262089 None:intergenic
ATTAAGCTCTTCCGCCGTAA+TGG 0.438859 3.2:+42261774 None:intergenic
TCAGAACTCGGATCCATTAT+GGG 0.452167 3.2:-42261982 MS.gene070168:CDS
GCACGGAGAGGGAGGTAGAT+CGG 0.455646 3.2:+42262088 None:intergenic
AGTAATGTTTGCGACGGTGA+TGG 0.471959 3.2:-42261692 MS.gene070168:CDS
GGATCCATTATGGGAAGCTT+AGG 0.492343 3.2:-42261973 MS.gene070168:CDS
GGATGGGAATGGTTCCATTA+CGG 0.496789 3.2:-42261788 MS.gene070168:CDS
AATGTTTCAGATAATGATGA+TGG 0.499085 3.2:-42261622 MS.gene070168:CDS
GAGAATGCTGCGTGGCCTCA+TGG 0.508600 3.2:-42261600 MS.gene070168:CDS
TTGAGTTCTTGCTCGGATGT+TGG 0.508676 3.2:+42261946 None:intergenic
AGGGAGGTAGATCGGGAAAG+AGG 0.510330 3.2:+42262096 None:intergenic
AAATTCGACGTCAACGGCGA+TGG 0.513184 3.2:-42262018 MS.gene070168:CDS
GAACATTGATTTCAAACCCA+TGG 0.515790 3.2:+42262143 None:intergenic
AATACGGTTATGAGAAGCCT+TGG 0.518490 3.2:-42261754 MS.gene070168:CDS
TGATTTCAAACCCATGGGCA+TGG 0.525002 3.2:+42262149 None:intergenic
AACATTGATTTCAAACCCAT+GGG 0.529932 3.2:+42262144 None:intergenic
TGGTGAAGAATGCTCGTTGG+CGG 0.535459 3.2:-42261734 MS.gene070168:CDS
ACAAGGAGAAAGCAATTTCG+CGG 0.541464 3.2:+42261661 None:intergenic
CGTTCACGCACTCGTCTCGC+CGG 0.549634 3.2:-42262066 MS.gene070168:CDS
GCAAGGAGCAAGAGTGTGCA+AGG 0.555294 3.2:+42261551 None:intergenic
AAGATCTCTGCATCAGAACT+CGG 0.556498 3.2:-42261994 MS.gene070168:CDS
TACGGCGGAAGAGCTTAATA+CGG 0.568724 3.2:-42261770 MS.gene070168:CDS
ATCCGTGAAGTCGACGGAGA+CGG 0.569339 3.2:-42261916 MS.gene070168:CDS
AGTGCGTGAACGCACGGAGA+GGG 0.575921 3.2:+42262077 None:intergenic
AGAGGATCTGAGGATGAAGA+TGG 0.576497 3.2:+42262114 None:intergenic
GAGACGAGTGCGTGAACGCA+CGG 0.576682 3.2:+42262071 None:intergenic
GCGGAGTGCTGGAAAATGAT+CGG 0.589115 3.2:-42261715 MS.gene070168:CDS
AATAAAACAAGCCATGCCCA+TGG 0.603102 3.2:-42262160 None:intergenic
ATAAAACAAGCCATGCCCAT+GGG 0.615792 3.2:-42262159 None:intergenic
AGTGTGCAAGGACAAAGCCC+AGG 0.622397 3.2:+42261563 None:intergenic
AGATCGGGAAAGAGGATCTG+AGG 0.623262 3.2:+42262104 None:intergenic
GAAGTCGACGGAGACGGTGA+CGG 0.624687 3.2:-42261910 MS.gene070168:CDS
GCGTGAACGCACGGAGAGGG+AGG 0.624689 3.2:+42262080 None:intergenic
AACTAATCAAGAATGTAGCA+AGG 0.628215 3.2:+42261534 None:intergenic
CCTTGGTGAAGAATGCTCGT+TGG 0.637521 3.2:-42261737 MS.gene070168:CDS
TTCATCGAACTCAACACCAA+AGG 0.648901 3.2:-42261868 MS.gene070168:CDS
GAGTGCGTGAACGCACGGAG+AGG 0.655506 3.2:+42262076 None:intergenic
AACGTGATCCGTGAAGTCGA+CGG 0.658507 3.2:-42261922 MS.gene070168:CDS
GATCGGAGTAATGTTTGCGA+CGG 0.665361 3.2:-42261698 MS.gene070168:CDS
TGGGAATGGTTCCATTACGG+CGG 0.692707 3.2:-42261785 MS.gene070168:CDS
CCAACGAGCATTCTTCACCA+AGG 0.697334 3.2:+42261737 None:intergenic
TGATGCTGCACATTTCAACA+AGG 0.700541 3.2:+42261644 None:intergenic
GCCCAAATTTGGGAACCATG+AGG 0.714151 3.2:+42261585 None:intergenic
TGATGATGGAGAATGCTGCG+TGG 0.780842 3.2:-42261608 MS.gene070168:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATGTTTCAGATAATGATGA+TGG - chr3.2:42262065-42262084 MS.gene070168:CDS 25.0%
TTCAAAAAATTCGACGTCAA+CGG - chr3.2:42261663-42261682 MS.gene070168:CDS 30.0%
!! AACATTGATTTCAAACCCAT+GGG + chr3.2:42261546-42261565 None:intergenic 30.0%
!!! TGCTTTTGCTGTTTTTGATA+TGG - chr3.2:42261878-42261897 MS.gene070168:CDS 30.0%
!!! TTGCTGTTTTTGATATGGAT+GGG - chr3.2:42261883-42261902 MS.gene070168:CDS 30.0%
!!! TTTGCTGTTTTTGATATGGA+TGG - chr3.2:42261882-42261901 MS.gene070168:CDS 30.0%
! GTTTTTGATATGGATGGGAA+TGG - chr3.2:42261888-42261907 MS.gene070168:CDS 35.0%
!! GAACATTGATTTCAAACCCA+TGG + chr3.2:42261547-42261566 None:intergenic 35.0%
AAGATCTCTGCATCAGAACT+CGG - chr3.2:42261693-42261712 MS.gene070168:CDS 40.0%
AATACGGTTATGAGAAGCCT+TGG - chr3.2:42261933-42261952 MS.gene070168:CDS 40.0%
ACAAGGAGAAAGCAATTTCG+CGG + chr3.2:42262029-42262048 None:intergenic 40.0%
ATCAGAACTCGGATCCATTA+TGG - chr3.2:42261704-42261723 MS.gene070168:CDS 40.0%
TCAGAACTCGGATCCATTAT+GGG - chr3.2:42261705-42261724 MS.gene070168:CDS 40.0%
TGATGCTGCACATTTCAACA+AGG + chr3.2:42262046-42262065 None:intergenic 40.0%
TTCATCGAACTCAACACCAA+AGG - chr3.2:42261819-42261838 MS.gene070168:CDS 40.0%
TTGACCTAAGCTTCCCATAA+TGG + chr3.2:42261721-42261740 None:intergenic 40.0%
! AAAAACTTCTTCGAGTTCGC+CGG + chr3.2:42261643-42261662 None:intergenic 40.0%
!! CGTTGATTCTGATGAGATCT+TGG - chr3.2:42261842-42261861 MS.gene070168:CDS 40.0%
AGAGGATCTGAGGATGAAGA+TGG + chr3.2:42261576-42261595 None:intergenic 45.0%
AGTAATGTTTGCGACGGTGA+TGG - chr3.2:42261995-42262014 MS.gene070168:CDS 45.0%
ATTAAGCTCTTCCGCCGTAA+TGG + chr3.2:42261916-42261935 None:intergenic 45.0%
CACGTTGTTGAGTTCTTGCT+CGG + chr3.2:42261751-42261770 None:intergenic 45.0%
CTCATCAGAATCAACGCCTT+TGG + chr3.2:42261838-42261857 None:intergenic 45.0%
GATCGGAGTAATGTTTGCGA+CGG - chr3.2:42261989-42262008 MS.gene070168:CDS 45.0%
GCCTCATGGTTCCCAAATTT+GGG - chr3.2:42262101-42262120 MS.gene070168:CDS 45.0%
GGATCCATTATGGGAAGCTT+AGG - chr3.2:42261714-42261733 MS.gene070168:CDS 45.0%
GGATGGGAATGGTTCCATTA+CGG - chr3.2:42261899-42261918 MS.gene070168:CDS 45.0%
TACGGCGGAAGAGCTTAATA+CGG - chr3.2:42261917-42261936 MS.gene070168:CDS 45.0%
TTGAGTTCTTGCTCGGATGT+TGG + chr3.2:42261744-42261763 None:intergenic 45.0%
AAATTCGACGTCAACGGCGA+TGG - chr3.2:42261669-42261688 MS.gene070168:CDS 50.0%
AACGTGATCCGTGAAGTCGA+CGG - chr3.2:42261765-42261784 MS.gene070168:CDS 50.0%
ACAAAGCCCAGGCCCAAATT+TGG + chr3.2:42262116-42262135 None:intergenic 50.0%
AGATCGGGAAAGAGGATCTG+AGG + chr3.2:42261586-42261605 None:intergenic 50.0%
ATGGTTCCCAAATTTGGGCC+TGG - chr3.2:42262106-42262125 MS.gene070168:CDS 50.0%
CAAAGCCCAGGCCCAAATTT+GGG + chr3.2:42262115-42262134 None:intergenic 50.0%
CCAACGAGCATTCTTCACCA+AGG + chr3.2:42261953-42261972 None:intergenic 50.0%
CCTTGGTGAAGAATGCTCGT+TGG - chr3.2:42261950-42261969 MS.gene070168:CDS 50.0%
GCCCAAATTTGGGAACCATG+AGG + chr3.2:42262105-42262124 None:intergenic 50.0%
GGCCTCATGGTTCCCAAATT+TGG - chr3.2:42262100-42262119 MS.gene070168:CDS 50.0%
TGGGAATGGTTCCATTACGG+CGG - chr3.2:42261902-42261921 MS.gene070168:CDS 50.0%
TGGTGAAGAATGCTCGTTGG+CGG - chr3.2:42261953-42261972 MS.gene070168:CDS 50.0%
TGGTTCCCAAATTTGGGCCT+GGG - chr3.2:42262107-42262126 MS.gene070168:CDS 50.0%
!! GCGGAGTGCTGGAAAATGAT+CGG - chr3.2:42261972-42261991 MS.gene070168:CDS 50.0%
!! TGATGATGGAGAATGCTGCG+TGG - chr3.2:42262079-42262098 MS.gene070168:CDS 50.0%
AGGGAGGTAGATCGGGAAAG+AGG + chr3.2:42261594-42261613 None:intergenic 55.0%
AGTGTGCAAGGACAAAGCCC+AGG + chr3.2:42262127-42262146 None:intergenic 55.0%
ATCCGTGAAGTCGACGGAGA+CGG - chr3.2:42261771-42261790 MS.gene070168:CDS 55.0%
! GCAAGGAGCAAGAGTGTGCA+AGG + chr3.2:42262139-42262158 None:intergenic 55.0%
AATGCTCGTTGGCGGAGTGC+TGG - chr3.2:42261961-42261980 MS.gene070168:CDS 60.0%
AGTGCGTGAACGCACGGAGA+GGG + chr3.2:42261613-42261632 None:intergenic 60.0%
CACGGAGAGGGAGGTAGATC+GGG + chr3.2:42261601-42261620 None:intergenic 60.0%
GAAGTCGACGGAGACGGTGA+CGG - chr3.2:42261777-42261796 MS.gene070168:CDS 60.0%
GAGAATGCTGCGTGGCCTCA+TGG - chr3.2:42262087-42262106 MS.gene070168:CDS 60.0%
GAGACGAGTGCGTGAACGCA+CGG + chr3.2:42261619-42261638 None:intergenic 60.0%
GCACGGAGAGGGAGGTAGAT+CGG + chr3.2:42261602-42261621 None:intergenic 60.0%
!! CACCGTCTCCGTCGACTTCA+CGG + chr3.2:42261776-42261795 None:intergenic 60.0%
CGTTCACGCACTCGTCTCGC+CGG - chr3.2:42261621-42261640 MS.gene070168:CDS 65.0%
GAGTGCGTGAACGCACGGAG+AGG + chr3.2:42261614-42261633 None:intergenic 65.0%
GCGTGAACGCACGGAGAGGG+AGG + chr3.2:42261610-42261629 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 42261540 42262169 42261540 ID=MS.gene070168
chr3.2 mRNA 42261540 42262169 42261540 ID=MS.gene070168.t1;Parent=MS.gene070168
chr3.2 exon 42261540 42262169 42261540 ID=MS.gene070168.t1.exon1;Parent=MS.gene070168.t1
chr3.2 CDS 42261540 42262169 42261540 ID=cds.MS.gene070168.t1;Parent=MS.gene070168.t1
Gene Sequence

>MS.gene070168

ATGCCCATGGGTTTGAAATCAATGTTCAACAAGCCATCTTCATCCTCAGATCCTCTTTCCCGATCTACCTCCCTCTCCGTGCGTTCACGCACTCGTCTCGCCGGCGAACTCGAAGAAGTTTTTTTCAAAAAATTCGACGTCAACGGCGATGGCAAGATCTCTGCATCAGAACTCGGATCCATTATGGGAAGCTTAGGTCAACCAACATCCGAGCAAGAACTCAACAACGTGATCCGTGAAGTCGACGGAGACGGTGACGGTTGCATCAGTTTACAAGAATTCATCGAACTCAACACCAAAGGCGTTGATTCTGATGAGATCTTGGAGAATTTGAATGATGCTTTTGCTGTTTTTGATATGGATGGGAATGGTTCCATTACGGCGGAAGAGCTTAATACGGTTATGAGAAGCCTTGGTGAAGAATGCTCGTTGGCGGAGTGCTGGAAAATGATCGGAGTAATGTTTGCGACGGTGATGGAGTTTTTTCCGCGAAATTGCTTTCTCCTTGTTGAAATGTGCAGCATCAATGTTTCAGATAATGATGATGGAGAATGCTGCGTGGCCTCATGGTTCCCAAATTTGGGCCTGGGCTTTGTCCTTGCACACTCTTGCTCCTTGCTACATTCTTGA
Protein sequence

>MS.gene070168.t1

MPMGLKSMFNKPSSSSDPLSRSTSLSVRSRTRLAGELEEVFFKKFDVNGDGKISASELGSIMGSLGQPTSEQELNNVIREVDGDGDGCISLQEFIELNTKGVDSDEILENLNDAFAVFDMDGNGSITAEELNTVMRSLGEECSLAECWKMIGVMFATVMEFFPRNCFLLVEMCSINVSDNDDGECCVASWFPNLGLGFVLAHSCSLLHS