AlfalfaGEDB | MS.gene62689

M. sativa cultivar XinJiangDaYe / MS.gene62689

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62689.t1	XP_003630938.2	99.5	190	1	0	1	190	1	190	7.70E-99	369.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62689.t1	Q9FYK2	61.2	178	61	1	8	177	1	178	6.5e-54	211.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62689.t1	G7LAK6	99.5	190	1	0	1	190	1	190	5.6e-99	369.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052672	MS.gene62689	0.975603	2.95E-140	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene62689	MS.gene016268	PPI
MS.gene62689	MS.gene93763	PPI
MS.gene62689	MS.gene49270	PPI
MS.gene62689	MS.gene29794	PPI
MS.gene62689	MS.gene71511	PPI
MS.gene62689	MS.gene033361	PPI
MS.gene62689	MS.gene87673	PPI
MS.gene58860	MS.gene62689	PPI
MS.gene62689	MS.gene060446	PPI
MS.gene62689	MS.gene013748	PPI
MS.gene62689	MS.gene98294	PPI
MS.gene62689	MS.gene061261	PPI
MS.gene62689	MS.gene036930	PPI
MS.gene62689	MS.gene026618	PPI
MS.gene62689	MS.gene27529	PPI
MS.gene62689	MS.gene35562	PPI
MS.gene62689	MS.gene92775	PPI
MS.gene62689	MS.gene74452	PPI
MS.gene62689	MS.gene92789	PPI
MS.gene62689	MS.gene29793	PPI
MS.gene62689	MS.gene022456	PPI
MS.gene62689	MS.gene05284	PPI
MS.gene62689	MS.gene03228	PPI
MS.gene62689	MS.gene46237	PPI
MS.gene62689	MS.gene036915	PPI
MS.gene62689	MS.gene040331	PPI
MS.gene62689	MS.gene94551	PPI
MS.gene62689	MS.gene022455	PPI
MS.gene62689	MS.gene63000	PPI
MS.gene62689	MS.gene046988	PPI
MS.gene62689	MS.gene074100	PPI
MS.gene62689	MS.gene54637	PPI
MS.gene62689	MS.gene58906	PPI
MS.gene62689	MS.gene79028	PPI
MS.gene62689	MS.gene49271	PPI
MS.gene62689	MS.gene026940	PPI
MS.gene62689	MS.gene65954	PPI
MS.gene62689	MS.gene98295	PPI
MS.gene62689	MS.gene041795	PPI
MS.gene62689	MS.gene55496	PPI
MS.gene62689	MS.gene27516	PPI
MS.gene62689	MS.gene040127	PPI
MS.gene62689	MS.gene011400	PPI
MS.gene62689	MS.gene62540	PPI
MS.gene62689	MS.gene47134	PPI
MS.gene62689	MS.gene02545	PPI
MS.gene62689	MS.gene35563	PPI
MS.gene62689	MS.gene057167	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62689.t1	MTR_8g105230	99.474	190	1	0	1	190	1	190	4.27e-136	378
MS.gene62689.t1	MTR_1g032070	66.120	183	46	3	3	171	1	181	2.25e-79	235
MS.gene62689.t1	MTR_3g083470	55.034	149	57	1	33	181	90	228	1.01e-48	158
MS.gene62689.t1	MTR_3g067610	52.593	135	60	1	36	170	5	135	5.40e-45	145
MS.gene62689.t1	MTR_5g079340	49.630	135	67	1	36	170	4	137	8.63e-40	132
MS.gene62689.t1	MTR_1g046950	42.958	142	69	2	36	170	4	140	5.31e-36	123
MS.gene62689.t1	MTR_1g047100	42.446	139	73	2	36	170	4	139	1.49e-35	122
MS.gene62689.t1	MTR_8g107110	47.407	135	70	1	36	170	24	157	3.05e-35	122
MS.gene62689.t1	MTR_7g075040	41.243	177	95	3	6	173	17	193	4.22e-35	122
MS.gene62689.t1	MTR_8g036075	38.421	190	97	5	7	177	10	198	6.90e-35	122
MS.gene62689.t1	MTR_7g087610	47.794	136	71	0	36	171	12	147	1.05e-34	120
MS.gene62689.t1	MTR_7g087610	54.412	68	31	0	103	170	6	73	3.89e-17	74.7
MS.gene62689.t1	MTR_5g088320	48.529	136	70	0	36	171	12	147	1.17e-34	120
MS.gene62689.t1	MTR_5g088320	54.412	68	31	0	103	170	6	73	7.90e-17	73.9
MS.gene62689.t1	MTR_4g086260	44.681	141	76	1	36	176	57	195	1.20e-34	121
MS.gene62689.t1	MTR_6g025320	48.529	136	70	0	36	171	12	147	1.31e-34	119
MS.gene62689.t1	MTR_6g025320	52.941	68	32	0	103	170	6	73	3.02e-16	72.4
MS.gene62689.t1	MTR_5g017550	41.477	176	87	5	11	175	16	186	5.48e-34	119
MS.gene62689.t1	MTR_1g076650	46.324	136	73	0	36	171	12	147	5.77e-34	118
MS.gene62689.t1	MTR_1g076650	50.000	68	34	0	103	170	6	73	2.55e-14	67.4
MS.gene62689.t1	MTR_1g041285	47.482	139	72	1	36	173	12	150	1.06e-33	117
MS.gene62689.t1	MTR_1g041285	46.250	80	40	2	101	180	5	81	3.76e-14	67.0
MS.gene62689.t1	MTR_5g017510	43.312	157	85	3	21	175	33	187	3.41e-33	117
MS.gene62689.t1	MTR_5g017560	43.312	157	85	3	21	175	33	187	3.41e-33	117
MS.gene62689.t1	MTR_4g067270	44.526	137	74	1	36	170	5	141	1.47e-32	114
MS.gene62689.t1	MTR_6g079570	42.667	150	76	3	36	180	26	170	1.18e-31	113
MS.gene62689.t1	MTR_5g027000	40.667	150	88	1	22	170	7	156	1.88e-31	112
MS.gene62689.t1	MTR_7g090450	41.429	140	77	3	36	170	73	212	2.86e-29	108
MS.gene62689.t1	MTR_7g089760	43.662	142	78	1	35	174	4	145	1.18e-28	104
MS.gene62689.t1	MTR_6g023460	41.667	132	76	1	40	171	12	142	2.32e-27	100
MS.gene62689.t1	MTR_4g103630	42.222	135	77	1	36	170	6	139	2.88e-27	100
MS.gene62689.t1	MTR_4g103650	42.963	135	76	1	36	170	2	135	3.09e-27	100
MS.gene62689.t1	MTR_4g103655	42.222	135	77	1	36	170	6	139	4.29e-27	100
MS.gene62689.t1	MTR_2g098890	41.007	139	78	2	36	170	64	202	1.10e-26	101
MS.gene62689.t1	MTR_0168s0120	48.649	111	57	0	61	171	1	111	4.78e-26	96.7
MS.gene62689.t1	MTR_0168s0120	45.902	61	33	0	36	96	49	109	1.51e-12	61.6
MS.gene62689.t1	MTR_6g025320	48.649	111	57	0	61	171	1	111	4.78e-26	96.7
MS.gene62689.t1	MTR_6g025320	45.902	61	33	0	36	96	49	109	1.51e-12	61.6
MS.gene62689.t1	MTR_8g078270	39.744	156	89	3	19	170	33	187	1.56e-25	97.8
MS.gene62689.t1	MTR_8g066630	40.299	134	77	1	36	166	17	150	4.02e-24	93.2
MS.gene62689.t1	MTR_8g066630	43.939	66	37	0	36	101	93	158	3.16e-12	62.0
MS.gene62689.t1	MTR_7g074020	36.620	142	89	1	36	176	30	171	6.12e-24	93.2
MS.gene62689.t1	MTR_7g074020	49.206	63	32	0	108	170	29	91	1.05e-14	68.9
MS.gene62689.t1	MTR_3g089090	38.060	134	82	1	37	170	6	138	8.66e-24	91.7
MS.gene62689.t1	MTR_3g089070	38.060	134	82	1	37	170	7	139	9.48e-24	91.7
MS.gene62689.t1	MTR_6g007613	35.185	162	100	2	20	176	9	170	2.63e-23	91.3
MS.gene62689.t1	MTR_1g071150	38.028	142	81	2	35	173	11	148	5.53e-23	90.1
MS.gene62689.t1	MTR_1g071150	43.056	72	41	0	25	96	73	144	2.30e-14	67.4
MS.gene62689.t1	MTR_5g008705	34.646	127	83	0	44	170	2	128	7.23e-23	89.0
MS.gene62689.t1	MTR_4g115170	37.179	156	80	2	36	173	64	219	2.66e-22	90.1
MS.gene62689.t1	MTR_4g112460	34.307	137	88	1	36	170	11	147	8.06e-22	87.4
MS.gene62689.t1	MTR_5g008695	36.607	112	69	1	60	169	1	112	8.82e-21	83.2
MS.gene62689.t1	MTR_8g069915	33.577	137	89	1	36	170	12	148	1.00e-20	84.7
MS.gene62689.t1	MTR_8g069915	45.312	64	35	0	36	99	87	150	2.13e-12	62.8
MS.gene62689.t1	MTR_7g115040	38.028	142	88	0	30	171	6	147	2.56e-20	83.2
MS.gene62689.t1	MTR_1g030440	34.899	149	81	3	34	172	20	162	1.06e-19	82.0
MS.gene62689.t1	MTR_7g074240	33.129	163	97	3	20	170	8	170	1.19e-19	82.0
MS.gene62689.t1	MTR_3g088655	34.641	153	88	5	34	174	6	158	1.12e-18	79.0
MS.gene62689.t1	MTR_4g132070	36.111	144	82	4	37	176	397	534	1.93e-18	82.8
MS.gene62689.t1	MTR_6g007613	32.624	141	91	1	20	156	9	149	2.04e-18	78.2
MS.gene62689.t1	MTR_6g007613	49.206	63	32	0	108	170	28	90	5.10e-15	69.3
MS.gene62689.t1	MTR_5g009830	37.857	140	81	3	37	174	372	507	2.10e-18	82.4
MS.gene62689.t1	MTR_7g074020	33.884	121	80	0	36	156	30	150	2.59e-18	78.2
MS.gene62689.t1	MTR_7g074020	49.206	63	32	0	108	170	29	91	6.41e-15	69.3
MS.gene62689.t1	MTR_1g026190	34.868	152	88	5	37	184	388	532	4.30e-18	81.6
MS.gene62689.t1	MTR_8g099095	35.570	149	90	3	37	183	372	516	2.13e-17	79.7
MS.gene62689.t1	MTR_5g011850	32.593	135	89	1	37	171	13	145	2.14e-17	75.5
MS.gene62689.t1	MTR_4g132040	34.507	142	87	3	37	176	401	538	3.45e-17	79.0
MS.gene62689.t1	MTR_0028s0170	34.783	138	88	2	37	174	384	519	1.24e-16	77.4
MS.gene62689.t1	MTR_5g092810	35.461	141	81	4	37	173	398	532	2.26e-16	76.6
MS.gene62689.t1	MTR_7g068710	35.484	155	87	5	36	181	361	511	2.82e-16	76.3
MS.gene62689.t1	MTR_1g096490	36.879	141	82	3	35	173	334	469	4.66e-16	75.9
MS.gene62689.t1	MTR_7g106710	35.714	140	83	3	37	174	441	575	6.49e-16	75.5
MS.gene62689.t1	MTR_1g041150	36.054	147	88	4	29	174	417	558	8.16e-16	75.1
MS.gene62689.t1	MTR_1g055255	35.570	149	86	5	29	174	423	564	9.55e-16	74.7
MS.gene62689.t1	MTR_3g051770	32.667	150	90	4	37	178	389	535	9.57e-16	74.7
MS.gene62689.t1	MTR_8g095440	35.461	141	86	3	35	174	334	470	1.34e-15	74.3
MS.gene62689.t1	MTR_3g098090	33.333	141	89	3	35	174	336	472	6.38e-15	72.4
MS.gene62689.t1	MTR_5g089320	31.724	145	97	2	37	181	374	516	1.69e-14	71.2
MS.gene62689.t1	MTR_3g083460	46.753	77	35	2	101	171	11	87	2.10e-14	65.9
MS.gene62689.t1	MTR_3g098070	32.624	141	90	3	35	174	333	469	6.69e-14	69.3
MS.gene62689.t1	MTR_5g079470	52.542	59	27	1	38	96	12	69	1.38e-13	63.5
MS.gene62689.t1	MTR_1g054865	35.172	145	84	5	29	170	460	597	3.27e-13	67.4
MS.gene62689.t1	MTR_5g099240	33.562	146	93	3	29	174	395	536	4.61e-12	64.3
MS.gene62689.t1	MTR_5g099240	33.562	146	93	3	29	174	323	464	4.73e-12	63.9
MS.gene62689.t1	MTR_4g107490	29.412	153	101	2	37	183	379	530	1.14e-11	63.2
MS.gene62689.t1	MTR_4g082050	48.438	64	33	0	107	170	75	138	2.67e-11	59.3
MS.gene62689.t1	MTR_7g091890	31.469	143	93	2	34	174	361	500	4.06e-11	61.2
MS.gene62689.t1	MTR_5g089440	33.871	124	65	4	69	179	73	192	6.72e-11	59.3
MS.gene62689.t1	MTR_7g106710	35.577	104	62	2	37	138	441	541	9.11e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene62689.t1	AT1G24620	60.109	183	59	2	8	179	1	180	6.17e-72	216
MS.gene62689.t1	AT1G66400	46.763	139	72	1	36	172	15	153	5.69e-40	134
MS.gene62689.t1	AT1G18210	48.889	135	65	1	36	170	23	153	6.81e-38	129
MS.gene62689.t1	AT1G18210	48.889	135	65	1	36	170	23	153	6.81e-38	129
MS.gene62689.t1	AT5G37770	44.371	151	80	1	27	173	8	158	6.16e-37	126
MS.gene62689.t1	AT5G37770	44.371	151	80	1	27	173	8	158	6.16e-37	126
MS.gene62689.t1	AT1G73630	45.926	135	69	1	36	170	20	150	2.20e-36	124
MS.gene62689.t1	AT5G37780	49.265	136	69	0	36	171	12	147	2.06e-35	122
MS.gene62689.t1	AT5G37780	54.412	68	31	0	103	170	6	73	7.52e-17	73.9
MS.gene62689.t1	AT1G66410	49.265	136	69	0	36	171	12	147	2.06e-35	122
MS.gene62689.t1	AT1G66410	54.412	68	31	0	103	170	6	73	7.52e-17	73.9
MS.gene62689.t1	AT2G27030	47.857	140	73	0	36	175	12	151	2.43e-35	122
MS.gene62689.t1	AT2G27030	52.941	68	32	0	103	170	6	73	4.05e-16	72.8
MS.gene62689.t1	AT5G21274	49.265	136	69	0	36	171	12	147	5.97e-35	120
MS.gene62689.t1	AT5G21274	52.941	68	32	0	103	170	6	73	3.26e-16	72.4
MS.gene62689.t1	AT3G56800	48.529	136	70	0	36	171	12	147	6.87e-35	120
MS.gene62689.t1	AT3G56800	52.941	68	32	0	103	170	6	73	2.46e-16	72.8
MS.gene62689.t1	AT2G27030	48.529	136	70	0	36	171	12	147	6.87e-35	120
MS.gene62689.t1	AT2G27030	52.941	68	32	0	103	170	6	73	2.46e-16	72.8
MS.gene62689.t1	AT2G41110	48.529	136	70	0	36	171	12	147	6.87e-35	120
MS.gene62689.t1	AT2G41110	52.941	68	32	0	103	170	6	73	2.46e-16	72.8
MS.gene62689.t1	AT3G43810	48.529	136	70	0	36	171	12	147	1.38e-34	119
MS.gene62689.t1	AT3G43810	52.941	68	32	0	103	170	6	73	3.16e-16	72.4
MS.gene62689.t1	AT3G43810	48.529	136	70	0	36	171	12	147	2.20e-34	121
MS.gene62689.t1	AT3G43810	52.941	68	32	0	103	170	6	73	5.88e-16	73.2
MS.gene62689.t1	AT3G22930	46.763	139	73	1	36	173	35	173	4.56e-33	116
MS.gene62689.t1	AT3G22930	50.000	68	33	1	103	170	30	96	3.61e-13	65.1
MS.gene62689.t1	AT2G43290	45.070	142	71	2	36	170	65	206	2.32e-32	116
MS.gene62689.t1	AT2G15680	40.288	139	77	2	34	170	48	182	2.60e-32	115
MS.gene62689.t1	AT4G14640	44.118	136	76	0	36	171	13	148	3.06e-32	114
MS.gene62689.t1	AT4G14640	49.254	67	33	1	104	170	9	74	3.91e-12	61.6
MS.gene62689.t1	AT2G41110	44.595	148	70	1	36	171	12	159	1.39e-31	112
MS.gene62689.t1	AT2G41110	45.000	80	32	1	103	170	6	85	5.54e-13	64.3
MS.gene62689.t1	AT1G05990	47.101	138	70	2	36	170	5	142	3.14e-31	111
MS.gene62689.t1	AT2G41100	43.478	161	71	3	36	178	66	224	3.44e-31	115
MS.gene62689.t1	AT2G41100	36.111	144	76	2	60	187	1	144	7.53e-20	85.1
MS.gene62689.t1	AT2G41100	43.478	161	71	3	36	178	66	224	3.44e-31	115
MS.gene62689.t1	AT2G41100	36.111	144	76	2	60	187	1	144	7.53e-20	85.1
MS.gene62689.t1	AT2G41100	43.478	161	71	3	36	178	66	224	3.44e-31	115
MS.gene62689.t1	AT2G41100	36.111	144	76	2	60	187	1	144	7.53e-20	85.1
MS.gene62689.t1	AT5G37780	44.371	151	69	1	36	171	12	162	5.11e-31	111
MS.gene62689.t1	AT5G37780	44.578	83	31	1	103	170	6	88	1.05e-12	63.5
MS.gene62689.t1	AT2G41100	43.478	161	71	3	36	178	101	259	7.03e-31	115
MS.gene62689.t1	AT2G41100	38.690	168	87	2	36	187	12	179	2.63e-29	110
MS.gene62689.t1	AT2G41100	39.535	86	52	0	103	188	6	91	1.13e-13	68.2
MS.gene62689.t1	AT2G41100	43.478	161	71	3	36	178	101	259	7.03e-31	115
MS.gene62689.t1	AT2G41100	38.690	168	87	2	36	187	12	179	2.63e-29	110
MS.gene62689.t1	AT2G41100	39.535	86	52	0	103	188	6	91	1.13e-13	68.2
MS.gene62689.t1	AT3G59440	40.449	178	94	5	1	173	19	189	2.64e-30	110
MS.gene62689.t1	AT4G03290	44.755	143	74	2	36	173	5	147	3.40e-30	108
MS.gene62689.t1	AT5G37780	49.180	122	62	0	50	171	13	134	4.87e-30	107
MS.gene62689.t1	AT5G37780	45.902	61	33	0	36	96	72	132	7.12e-12	60.5
MS.gene62689.t1	AT1G66410	49.180	122	62	0	50	171	36	157	5.05e-30	108
MS.gene62689.t1	AT5G37780	49.180	122	62	0	50	171	52	173	5.94e-30	108
MS.gene62689.t1	AT5G37780	39.362	94	31	1	103	170	6	99	2.63e-11	60.1
MS.gene62689.t1	AT5G17470	40.146	137	78	2	37	170	3	138	6.59e-30	107
MS.gene62689.t1	AT4G12860	45.652	138	73	1	35	170	4	141	2.52e-29	106
MS.gene62689.t1	AT3G50360	34.146	164	104	1	7	170	2	161	1.38e-28	105
MS.gene62689.t1	AT3G50770	38.506	174	91	4	7	172	40	205	3.60e-28	105
MS.gene62689.t1	AT4G14640	43.443	122	69	0	50	171	9	130	5.72e-28	102
MS.gene62689.t1	AT4G14640	45.902	61	33	0	36	96	68	128	6.41e-12	60.8
MS.gene62689.t1	AT3G10190	42.446	139	73	4	36	170	70	205	6.94e-27	101
MS.gene62689.t1	AT1G66410	49.550	111	56	0	61	171	1	111	8.61e-27	98.6
MS.gene62689.t1	AT1G66410	45.902	61	33	0	36	96	49	109	2.26e-12	61.2
MS.gene62689.t1	AT1G66410	49.550	111	56	0	61	171	1	111	8.61e-27	98.6
MS.gene62689.t1	AT1G66410	45.902	61	33	0	36	96	49	109	2.26e-12	61.2
MS.gene62689.t1	AT2G41410	42.143	140	76	4	36	171	70	208	3.71e-26	100
MS.gene62689.t1	AT3G43810	48.649	111	57	0	61	171	1	111	5.00e-26	96.7
MS.gene62689.t1	AT3G43810	45.902	61	33	0	36	96	49	109	1.58e-12	61.6
MS.gene62689.t1	AT3G43810	48.649	111	57	0	61	171	1	111	5.00e-26	96.7
MS.gene62689.t1	AT3G43810	45.902	61	33	0	36	96	49	109	1.58e-12	61.6
MS.gene62689.t1	AT3G07490	40.876	137	79	1	36	170	5	141	1.09e-25	97.1
MS.gene62689.t1	AT5G42380	40.288	139	80	2	34	170	47	184	5.85e-25	96.3
MS.gene62689.t1	AT1G32250	39.437	142	70	2	36	166	16	152	1.90e-24	94.4
MS.gene62689.t1	AT2G41090	39.583	144	83	2	36	178	12	152	2.85e-24	94.7
MS.gene62689.t1	AT4G37010	33.333	153	98	1	18	170	13	161	6.81e-24	92.8
MS.gene62689.t1	AT4G37010	33.333	153	98	1	18	170	17	165	6.98e-24	92.8
MS.gene62689.t1	AT2G36180	36.496	137	84	1	37	170	1	137	8.74e-23	89.4
MS.gene62689.t1	AT2G41100	42.647	136	58	3	61	178	1	134	1.03e-22	90.9
MS.gene62689.t1	AT2G41100	50.847	59	29	0	36	94	66	124	3.84e-13	65.5
MS.gene62689.t1	AT1G76650	38.519	135	82	1	36	170	43	176	6.32e-22	88.2
MS.gene62689.t1	AT1G76650	38.519	135	82	1	36	170	43	176	6.32e-22	88.2
MS.gene62689.t1	AT3G03400	34.884	129	82	1	37	163	6	134	1.08e-21	86.3
MS.gene62689.t1	AT3G25600	32.117	137	91	1	36	170	12	148	7.49e-21	84.7
MS.gene62689.t1	AT3G25600	43.750	64	36	0	36	99	87	150	8.10e-12	60.8
MS.gene62689.t1	AT3G22930	46.316	95	51	0	36	130	35	129	1.26e-20	83.6
MS.gene62689.t1	AT3G22930	46.154	78	39	2	103	180	30	104	8.24e-14	65.5
MS.gene62689.t1	AT4G14640	44.211	95	53	0	36	130	13	107	3.26e-20	82.0
MS.gene62689.t1	AT4G14640	46.479	71	37	1	100	170	5	74	1.18e-12	62.4
MS.gene62689.t1	AT3G03000	40.876	137	72	2	35	166	19	151	7.85e-20	82.4
MS.gene62689.t1	AT3G03000	43.939	66	37	0	36	101	94	159	5.76e-14	67.0
MS.gene62689.t1	AT1G18530	31.387	137	92	1	36	170	7	143	3.75e-19	80.5
MS.gene62689.t1	AT1G18530	48.438	64	33	0	36	99	82	145	1.75e-13	65.5
MS.gene62689.t1	AT1G76640	36.232	138	84	2	36	170	22	158	8.17e-19	79.3
MS.gene62689.t1	AT4G23650	37.857	140	81	3	37	174	384	519	1.12e-18	83.2
MS.gene62689.t1	AT4G04695	36.620	142	80	4	37	174	337	472	2.48e-18	82.4
MS.gene62689.t1	AT3G51920	32.143	140	95	0	36	175	12	151	2.96e-18	77.8
MS.gene62689.t1	AT4G04720	37.324	142	79	4	37	174	385	520	3.54e-18	82.0
MS.gene62689.t1	AT4G04720	37.324	142	79	4	37	174	385	520	3.54e-18	82.0
MS.gene62689.t1	AT1G62820	33.333	135	88	1	37	171	14	146	4.22e-18	77.4
MS.gene62689.t1	AT4G04740	35.915	142	81	4	37	174	374	509	5.14e-18	81.3
MS.gene62689.t1	AT4G04740	35.915	142	81	4	37	174	374	509	5.14e-18	81.3
MS.gene62689.t1	AT4G04740	35.915	142	81	4	37	174	374	509	5.14e-18	81.3
MS.gene62689.t1	AT4G04740	35.915	142	81	4	37	174	374	509	5.14e-18	81.3
MS.gene62689.t1	AT4G04740	35.915	142	81	4	37	174	374	509	5.14e-18	81.3
MS.gene62689.t1	AT4G04740	35.915	142	81	4	37	174	374	509	5.14e-18	81.3
MS.gene62689.t1	AT1G76650	38.519	135	72	3	36	170	43	166	5.62e-18	77.4
MS.gene62689.t1	AT5G19360	34.416	154	90	3	37	190	374	516	2.08e-17	79.7
MS.gene62689.t1	AT5G12180	33.766	154	91	3	37	190	379	521	2.71e-17	79.3
MS.gene62689.t1	AT4G04700	32.258	186	96	5	9	170	289	468	2.79e-17	79.3
MS.gene62689.t1	AT1G12310	32.593	135	89	1	37	171	14	146	4.20e-17	74.7
MS.gene62689.t1	AT4G21940	35.461	141	81	4	37	173	407	541	1.21e-16	77.4
MS.gene62689.t1	AT4G21940	35.461	141	81	4	37	173	407	541	1.30e-16	77.4
MS.gene62689.t1	AT3G03430	54.839	62	27	1	35	96	8	68	1.77e-16	71.2
MS.gene62689.t1	AT4G20780	32.353	170	95	2	21	170	14	183	2.27e-16	73.9
MS.gene62689.t1	AT5G23580	37.956	137	80	3	35	170	326	458	3.77e-16	75.9
MS.gene62689.t1	AT1G61950	33.553	152	91	4	37	184	405	550	3.84e-16	75.9
MS.gene62689.t1	AT3G20410	32.667	150	91	4	37	182	397	540	4.36e-16	75.9
MS.gene62689.t1	AT3G20410	32.667	150	91	4	37	182	397	540	4.36e-16	75.9
MS.gene62689.t1	AT3G51850	32.468	154	93	3	36	181	359	509	6.99e-16	75.1
MS.gene62689.t1	AT3G10660	34.932	146	91	3	29	174	485	626	1.65e-15	74.3
MS.gene62689.t1	AT3G10660	34.932	146	91	3	29	174	485	626	1.65e-15	74.3
MS.gene62689.t1	AT5G44460	33.129	163	95	3	21	170	13	174	1.81e-15	71.2
MS.gene62689.t1	AT1G50700	32.394	142	86	4	37	174	379	514	2.05e-15	73.9
MS.gene62689.t1	AT4G04710	34.752	141	82	4	37	173	324	458	2.45e-15	73.6
MS.gene62689.t1	AT4G04710	34.752	141	82	4	37	173	338	472	2.79e-15	73.6
MS.gene62689.t1	AT3G03410	32.090	134	81	2	40	173	6	129	3.15e-15	69.3
MS.gene62689.t1	AT4G04710	34.752	141	82	4	37	173	351	485	3.20e-15	73.2
MS.gene62689.t1	AT5G04870	34.932	146	91	3	29	174	449	590	3.24e-15	73.6
MS.gene62689.t1	AT1G21550	34.641	153	74	6	36	171	10	153	3.47e-15	69.7
MS.gene62689.t1	AT4G09570	36.691	139	85	3	35	173	329	464	4.65e-15	72.8
MS.gene62689.t1	AT1G35670	36.691	139	85	3	35	173	330	465	4.90e-15	72.8
MS.gene62689.t1	AT1G76040	35.000	140	85	3	37	174	179	314	8.52e-15	71.6
MS.gene62689.t1	AT1G76040	35.000	140	85	3	37	174	179	314	8.52e-15	71.6
MS.gene62689.t1	AT1G76040	35.000	140	85	3	37	174	417	552	9.34e-15	72.0
MS.gene62689.t1	AT5G12480	32.653	147	87	4	34	174	268	408	2.70e-14	70.5
MS.gene62689.t1	AT4G04710	34.965	143	81	5	37	173	351	487	3.74e-14	70.1
MS.gene62689.t1	AT5G12480	32.653	147	87	4	34	174	362	502	4.42e-14	70.1
MS.gene62689.t1	AT2G41100	46.053	76	40	1	103	178	6	80	6.50e-14	66.2
MS.gene62689.t1	AT2G41100	50.847	59	29	0	36	94	12	70	4.01e-13	64.3
MS.gene62689.t1	AT5G17480	50.000	62	30	1	35	96	8	68	9.24e-14	64.3
MS.gene62689.t1	AT1G74740	30.323	155	97	3	37	183	365	516	1.93e-13	68.2
MS.gene62689.t1	AT4G38230	35.172	145	90	3	29	173	179	319	2.99e-13	67.4
MS.gene62689.t1	AT2G17290	34.247	146	92	3	29	174	384	525	4.56e-13	67.0
MS.gene62689.t1	AT2G17290	34.247	146	92	3	29	174	384	525	4.56e-13	67.0
MS.gene62689.t1	AT4G38230	35.172	145	90	3	29	173	353	493	5.91e-13	66.6
MS.gene62689.t1	AT4G38230	35.172	145	90	3	29	173	323	463	6.37e-13	66.6
MS.gene62689.t1	AT4G38230	35.172	145	90	3	29	173	323	463	6.37e-13	66.6
MS.gene62689.t1	AT3G57530	34.483	145	85	4	34	174	366	504	7.75e-13	66.6
MS.gene62689.t1	AT2G38910	33.333	144	88	4	29	170	433	570	2.09e-12	65.1
MS.gene62689.t1	AT4G35310	33.562	146	93	3	29	174	396	537	2.65e-12	65.1
MS.gene62689.t1	AT4G35310	33.562	146	93	3	29	174	396	537	2.65e-12	65.1
MS.gene62689.t1	AT2G41860	30.714	140	92	2	37	174	360	496	9.01e-12	63.2
MS.gene62689.t1	AT2G41860	30.714	140	92	2	37	174	360	496	9.45e-12	63.2
MS.gene62689.t1	AT3G01830	31.159	138	89	4	36	170	11	145	1.78e-11	59.7
MS.gene62689.t1	AT1G18890	29.032	155	99	3	37	183	369	520	2.02e-11	62.4
MS.gene62689.t1	AT2G31500	30.769	143	87	4	39	174	374	511	3.88e-11	61.6
MS.gene62689.t1	AT1G50700	27.381	168	86	5	37	174	379	540	3.93e-11	61.6
MS.gene62689.t1	AT5G19450	31.206	141	91	3	37	174	363	500	7.24e-11	60.8
MS.gene62689.t1	AT5G19450	31.206	141	91	3	37	174	363	500	7.24e-11	60.8

Find 53 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCAGAACTCGGATCCATTA+TGG	0.229796	4.2:+1534541	MS.gene62689:CDS
TTGACCTAAGCTTCCCATAA+TGG	0.330693	4.2:-1534555	None:intergenic
CTCCGTCTCCGTCGACTTCA+CGG	0.353446	4.2:-1534610	None:intergenic
AGGGAGGTAGATCGGGAAGG+AGG	0.387148	4.2:-1534431	None:intergenic
CGTTGATTCTGATGAGATCT+TGG	0.387320	4.2:+1534679	MS.gene62689:CDS
CATGTTGTTGAGTTCTTGTT+CGG	0.416865	4.2:-1534585	None:intergenic
CTCATCAGAATCAACGCCTT+TGG	0.436220	4.2:-1534672	None:intergenic
CACGGAGAGGGAGGTAGATC+GGG	0.437490	4.2:-1534438	None:intergenic
ATTAAGCTCTTCCGCCGTAA+TGG	0.438859	4.2:-1534750	None:intergenic
CATTCCGTAGGCATAGGTTC+AGG	0.443614	4.2:-1534929	None:intergenic
TCAGAACTCGGATCCATTAT+GGG	0.452167	4.2:+1534542	MS.gene62689:CDS
GCACGGAGAGGGAGGTAGAT+CGG	0.455646	4.2:-1534439	None:intergenic
GCGGAGTGCCGGAAAATGAT+AGG	0.469168	4.2:+1534809	MS.gene62689:CDS
TTGAGTTCTTGTTCGGATGT+TGG	0.478804	4.2:-1534578	None:intergenic
TGAGATCTTGGAGAATTTGA+AGG	0.488021	4.2:+1534691	MS.gene62689:CDS
AATGCTCGTTGGCGGAGTGC+CGG	0.492224	4.2:+1534798	MS.gene62689:CDS
GGATCCATTATGGGAAGCTT+AGG	0.492343	4.2:+1534551	MS.gene62689:CDS
GGATGGGAATGGTTCCATTA+CGG	0.496789	4.2:+1534736	MS.gene62689:CDS
AACCTATGCCTACGGAATGA+AGG	0.506392	4.2:+1534933	MS.gene62689:CDS
AAATTCGACGTCAACGGCGA+TGG	0.513184	4.2:+1534506	MS.gene62689:CDS
GAACATTGATTTCAAACCCA+TGG	0.515790	4.2:-1534384	None:intergenic
GAAAACTTCTTCGAGTTCGC+CGG	0.516588	4.2:-1534480	None:intergenic
AATACGGTTATGAGAAGCCT+TGG	0.518490	4.2:+1534770	MS.gene62689:CDS
GTTTAGGATGATGATGATGA+TGG	0.528462	4.2:+1534874	MS.gene62689:CDS
AACATTGATTTCAAACCCAT+GGG	0.529932	4.2:-1534383	None:intergenic
TGGTGAAGAATGCTCGTTGG+CGG	0.535459	4.2:+1534790	MS.gene62689:CDS
GGGAGGTAGATCGGGAAGGA+GGG	0.538320	4.2:-1534430	None:intergenic
TTCCTTCATTCCGTAGGCAT+AGG	0.546096	4.2:-1534935	None:intergenic
ATCCGTGAAGTCGACGGAGA+CGG	0.546929	4.2:+1534608	MS.gene62689:CDS
CGTTCACGCACTCGTCTCGC+CGG	0.549634	4.2:+1534461	MS.gene62689:CDS
AAGATCTCTGCATCAGAACT+CGG	0.556498	4.2:+1534530	MS.gene62689:CDS
GGTGTTGATAGCGACGGTGA+TGG	0.566640	4.2:+1534833	MS.gene62689:CDS
TACGGCGGAAGAGCTTAATA+CGG	0.568724	4.2:+1534754	MS.gene62689:CDS
AAAGAATTCCTTCATTCCGT+AGG	0.571843	4.2:-1534941	None:intergenic
AGTGCGTGAACGCACGGAGA+GGG	0.575921	4.2:-1534450	None:intergenic
GAGACGAGTGCGTGAACGCA+CGG	0.576682	4.2:-1534456	None:intergenic
GGAGGGTCTGAGGATGAAGA+TGG	0.576907	4.2:-1534413	None:intergenic
AATAAAACAAGTCATGCCCA+TGG	0.595375	4.2:+1534367	None:intergenic
AGATCGGGAAGGAGGGTCTG+AGG	0.601675	4.2:-1534423	None:intergenic
CAAACCTGAACCTATGCCTA+CGG	0.618100	4.2:+1534925	MS.gene62689:CDS
ATAAAACAAGTCATGCCCAT+GGG	0.624465	4.2:+1534368	None:intergenic
GCGTGAACGCACGGAGAGGG+AGG	0.624689	4.2:-1534447	None:intergenic
GAAGTCGACGGAGACGGAGA+CGG	0.630357	4.2:+1534614	MS.gene62689:CDS
CCTTGGTGAAGAATGCTCGT+TGG	0.637521	4.2:+1534787	MS.gene62689:CDS
GAGAGGGAGGTAGATCGGGA+AGG	0.642746	4.2:-1534434	None:intergenic
AACATGATCCGTGAAGTCGA+CGG	0.648696	4.2:+1534602	MS.gene62689:CDS
TTCATCGAACTCAACACCAA+AGG	0.648901	4.2:+1534656	MS.gene62689:CDS
GAGTGCGTGAACGCACGGAG+AGG	0.655506	4.2:-1534451	None:intergenic
ATAGGAGGTGTTGATAGCGA+CGG	0.664634	4.2:+1534827	MS.gene62689:CDS
GAGTGCCGGAAAATGATAGG+AGG	0.669085	4.2:+1534812	MS.gene62689:CDS
TGGGAATGGTTCCATTACGG+CGG	0.692707	4.2:+1534739	MS.gene62689:CDS
CCAACGAGCATTCTTCACCA+AGG	0.697334	4.2:-1534787	None:intergenic
GGGTTCTCGTCATGATACGA+CGG	0.703221	4.2:+1534895	MS.gene62689:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	TTCAAAAAATTCGACGTCAA+CGG	+	chr4.2:1534500-1534519	MS.gene62689:CDS	30.0%
!	TTTAGGATGATGATGATGAT+GGG	+	chr4.2:1534875-1534894	MS.gene62689:CDS	30.0%
!!	AACATTGATTTCAAACCCAT+GGG	-	chr4.2:1534386-1534405	None:intergenic	30.0%
!!	CGATTGATTTTGAAGAGTTT+AGG	+	chr4.2:1534858-1534877	MS.gene62689:CDS	30.0%
!!!	TGCTTTTGCTGTTTTTGATA+TGG	+	chr4.2:1534715-1534734	MS.gene62689:CDS	30.0%
!!!	TTGCTGTTTTTGATATGGAT+GGG	+	chr4.2:1534720-1534739	MS.gene62689:CDS	30.0%
!!!	TTTGCTGTTTTTGATATGGA+TGG	+	chr4.2:1534719-1534738	MS.gene62689:CDS	30.0%
	CATGTTGTTGAGTTCTTGTT+CGG	-	chr4.2:1534588-1534607	None:intergenic	35.0%
	TGAGATCTTGGAGAATTTGA+AGG	+	chr4.2:1534691-1534710	MS.gene62689:CDS	35.0%
!	GTTTAGGATGATGATGATGA+TGG	+	chr4.2:1534874-1534893	MS.gene62689:CDS	35.0%
!	GTTTTTGATATGGATGGGAA+TGG	+	chr4.2:1534725-1534744	MS.gene62689:CDS	35.0%
!!	GAACATTGATTTCAAACCCA+TGG	-	chr4.2:1534387-1534406	None:intergenic	35.0%
	AAGATCTCTGCATCAGAACT+CGG	+	chr4.2:1534530-1534549	MS.gene62689:CDS	40.0%
	AATACGGTTATGAGAAGCCT+TGG	+	chr4.2:1534770-1534789	MS.gene62689:CDS	40.0%
	ATCAGAACTCGGATCCATTA+TGG	+	chr4.2:1534541-1534560	MS.gene62689:CDS	40.0%
	TCAGAACTCGGATCCATTAT+GGG	+	chr4.2:1534542-1534561	MS.gene62689:CDS	40.0%
	TTCATCGAACTCAACACCAA+AGG	+	chr4.2:1534656-1534675	MS.gene62689:CDS	40.0%
	TTGACCTAAGCTTCCCATAA+TGG	-	chr4.2:1534558-1534577	None:intergenic	40.0%
	TTGAGTTCTTGTTCGGATGT+TGG	-	chr4.2:1534581-1534600	None:intergenic	40.0%
!	CAACACCTCCTATCATTTTC+CGG	-	chr4.2:1534820-1534839	None:intergenic	40.0%
!!	CGTTGATTCTGATGAGATCT+TGG	+	chr4.2:1534679-1534698	MS.gene62689:CDS	40.0%
	AACATGATCCGTGAAGTCGA+CGG	+	chr4.2:1534602-1534621	MS.gene62689:CDS	45.0%
	ATTAAGCTCTTCCGCCGTAA+TGG	-	chr4.2:1534753-1534772	None:intergenic	45.0%
	CAAACCTGAACCTATGCCTA+CGG	+	chr4.2:1534925-1534944	MS.gene62689:CDS	45.0%
	CTCATCAGAATCAACGCCTT+TGG	-	chr4.2:1534675-1534694	None:intergenic	45.0%
	GGATCCATTATGGGAAGCTT+AGG	+	chr4.2:1534551-1534570	MS.gene62689:CDS	45.0%
	GGATGGGAATGGTTCCATTA+CGG	+	chr4.2:1534736-1534755	MS.gene62689:CDS	45.0%
	TACGGCGGAAGAGCTTAATA+CGG	+	chr4.2:1534754-1534773	MS.gene62689:CDS	45.0%
!	GAAAACTTCTTCGAGTTCGC+CGG	-	chr4.2:1534483-1534502	None:intergenic	45.0%
!!	ATAGGAGGTGTTGATAGCGA+CGG	+	chr4.2:1534827-1534846	MS.gene62689:CDS	45.0%
	AAATTCGACGTCAACGGCGA+TGG	+	chr4.2:1534506-1534525	MS.gene62689:CDS	50.0%
	CATTCCGTAGGCATAGGTTC+AGG	-	chr4.2:1534932-1534951	None:intergenic	50.0%
	CCAACGAGCATTCTTCACCA+AGG	-	chr4.2:1534790-1534809	None:intergenic	50.0%
	CCTTGGTGAAGAATGCTCGT+TGG	+	chr4.2:1534787-1534806	MS.gene62689:CDS	50.0%
	GGGTTCTCGTCATGATACGA+CGG	+	chr4.2:1534895-1534914	MS.gene62689:CDS	50.0%
	TGGGAATGGTTCCATTACGG+CGG	+	chr4.2:1534739-1534758	MS.gene62689:CDS	50.0%
	TGGTGAAGAATGCTCGTTGG+CGG	+	chr4.2:1534790-1534809	MS.gene62689:CDS	50.0%
!!	GAGTGCCGGAAAATGATAGG+AGG	+	chr4.2:1534812-1534831	MS.gene62689:CDS	50.0%
	ATCCGTGAAGTCGACGGAGA+CGG	+	chr4.2:1534608-1534627	MS.gene62689:CDS	55.0%
	GGAGGGTCTGAGGATGAAGA+TGG	-	chr4.2:1534416-1534435	None:intergenic	55.0%
!!	GCGGAGTGCCGGAAAATGAT+AGG	+	chr4.2:1534809-1534828	MS.gene62689:CDS	55.0%
!!	GGTGTTGATAGCGACGGTGA+TGG	+	chr4.2:1534833-1534852	MS.gene62689:CDS	55.0%
	AATGCTCGTTGGCGGAGTGC+CGG	+	chr4.2:1534798-1534817	MS.gene62689:CDS	60.0%
	AGATCGGGAAGGAGGGTCTG+AGG	-	chr4.2:1534426-1534445	None:intergenic	60.0%
	AGGGAGGTAGATCGGGAAGG+AGG	-	chr4.2:1534434-1534453	None:intergenic	60.0%
	AGTGCGTGAACGCACGGAGA+GGG	-	chr4.2:1534453-1534472	None:intergenic	60.0%
	CACGGAGAGGGAGGTAGATC+GGG	-	chr4.2:1534441-1534460	None:intergenic	60.0%
	GAAGTCGACGGAGACGGAGA+CGG	+	chr4.2:1534614-1534633	MS.gene62689:CDS	60.0%
	GAGACGAGTGCGTGAACGCA+CGG	-	chr4.2:1534459-1534478	None:intergenic	60.0%
	GAGAGGGAGGTAGATCGGGA+AGG	-	chr4.2:1534437-1534456	None:intergenic	60.0%
	GCACGGAGAGGGAGGTAGAT+CGG	-	chr4.2:1534442-1534461	None:intergenic	60.0%
	GGGAGGTAGATCGGGAAGGA+GGG	-	chr4.2:1534433-1534452	None:intergenic	60.0%
!!	CTCCGTCTCCGTCGACTTCA+CGG	-	chr4.2:1534613-1534632	None:intergenic	60.0%
	CGTTCACGCACTCGTCTCGC+CGG	+	chr4.2:1534461-1534480	MS.gene62689:CDS	65.0%
	GAGTGCGTGAACGCACGGAG+AGG	-	chr4.2:1534454-1534473	None:intergenic	65.0%
	GCGTGAACGCACGGAGAGGG+AGG	-	chr4.2:1534450-1534469	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	1534380	1534952	1534380	ID=MS.gene62689
chr4.2	mRNA	1534380	1534952	1534380	ID=MS.gene62689.t1;Parent=MS.gene62689
chr4.2	exon	1534380	1534952	1534380	ID=MS.gene62689.t1.exon1;Parent=MS.gene62689.t1
chr4.2	CDS	1534380	1534952	1534380	ID=cds.MS.gene62689.t1;Parent=MS.gene62689.t1

Gene Sequence

>MS.gene62689

ATGCCCATGGGTTTGAAATCAATGTTCAACAAGCCATCTTCATCCTCAGACCCTCCTTCCCGATCTACCTCCCTCTCCGTGCGTTCACGCACTCGTCTCGCCGGCGAACTCGAAGAAGTTTTCAAAAAATTCGACGTCAACGGCGATGGCAAGATCTCTGCATCAGAACTCGGATCCATTATGGGAAGCTTAGGTCAACCAACATCCGAACAAGAACTCAACAACATGATCCGTGAAGTCGACGGAGACGGAGACGGTTGCATCAGTTTACAAGAATTCATCGAACTCAACACCAAAGGCGTTGATTCTGATGAGATCTTGGAGAATTTGAAGGATGCTTTTGCTGTTTTTGATATGGATGGGAATGGTTCCATTACGGCGGAAGAGCTTAATACGGTTATGAGAAGCCTTGGTGAAGAATGCTCGTTGGCGGAGTGCCGGAAAATGATAGGAGGTGTTGATAGCGACGGTGATGGAACGATTGATTTTGAAGAGTTTAGGATGATGATGATGATGGGTTCTCGTCATGATACGACGGATAGAGTCAAACCTGAACCTATGCCTACGGAATGA

Protein sequence

>MS.gene62689.t1

MPMGLKSMFNKPSSSSDPPSRSTSLSVRSRTRLAGELEEVFKKFDVNGDGKISASELGSIMGSLGQPTSEQELNNMIREVDGDGDGCISLQEFIELNTKGVDSDEILENLKDAFAVFDMDGNGSITAEELNTVMRSLGEECSLAECRKMIGGVDSDGDGTIDFEEFRMMMMMGSRHDTTDRVKPEPMPTE