AlfalfaGEDB | MS.gene026940

M. sativa cultivar XinJiangDaYe / MS.gene026940

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872
PFAM: PF13499.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026940.t1	XP_013450817.1	98.2	169	3	0	7	175	2	170	5.30E-70	273.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026940.t1	Q7F0J0	64.5	166	59	0	8	173	2	167	2.0e-49	196.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026940.t1	I3SUA4	98.2	169	3	0	7	175	2	170	3.8e-70	273.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene015658	MS.gene026940	PPI
MS.gene024717	MS.gene026940	PPI
MS.gene27529	MS.gene026940	PPI
MS.gene026940	MS.gene53650	PPI
MS.gene22553	MS.gene026940	PPI
MS.gene53662	MS.gene026940	PPI
MS.gene35563	MS.gene026940	PPI
MS.gene070168	MS.gene026940	PPI
MS.gene55496	MS.gene026940	PPI
MS.gene003880	MS.gene026940	PPI
MS.gene49271	MS.gene026940	PPI
MS.gene67281	MS.gene026940	PPI
MS.gene016268	MS.gene026940	PPI
MS.gene025777	MS.gene026940	PPI
MS.gene21155	MS.gene026940	PPI
MS.gene026940	MS.gene98295	PPI
MS.gene004899	MS.gene026940	PPI
MS.gene07422	MS.gene026940	PPI
MS.gene09934	MS.gene026940	PPI
MS.gene96922	MS.gene026940	PPI
MS.gene21932	MS.gene026940	PPI
MS.gene026940	MS.gene21931	PPI
MS.gene47134	MS.gene026940	PPI
MS.gene026940	MS.gene53659	PPI
MS.gene026940	MS.gene09960	PPI
MS.gene026940	MS.gene061768	PPI
MS.gene022455	MS.gene026940	PPI
MS.gene05284	MS.gene026940	PPI
MS.gene21931	MS.gene026940	PPI
MS.gene041795	MS.gene026940	PPI
MS.gene046988	MS.gene026940	PPI
MS.gene63000	MS.gene026940	PPI
MS.gene80011	MS.gene026940	PPI
MS.gene63281	MS.gene026940	PPI
MS.gene96914	MS.gene026940	PPI
MS.gene53648	MS.gene026940	PPI
MS.gene017446	MS.gene026940	PPI
MS.gene026940	MS.gene057167	PPI
MS.gene026940	MS.gene93763	PPI
MS.gene026940	MS.gene80012	PPI
MS.gene040127	MS.gene026940	PPI
MS.gene53659	MS.gene026940	PPI
MS.gene038456	MS.gene026940	PPI
MS.gene000724	MS.gene026940	PPI
MS.gene052672	MS.gene026940	PPI
MS.gene74452	MS.gene026940	PPI
MS.gene060446	MS.gene026940	PPI
MS.gene80013	MS.gene026940	PPI
MS.gene026940	MS.gene29794	PPI
MS.gene25186	MS.gene026940	PPI
MS.gene008831	MS.gene026940	PPI
MS.gene96913	MS.gene026940	PPI
MS.gene026940	MS.gene71511	PPI
MS.gene009021	MS.gene026940	PPI
MS.gene026940	MS.gene033361	PPI
MS.gene026940	MS.gene056461	PPI
MS.gene46237	MS.gene026940	PPI
MS.gene020515	MS.gene026940	PPI
MS.gene026940	MS.gene98972	PPI
MS.gene070167	MS.gene026940	PPI
MS.gene026940	MS.gene29459	PPI
MS.gene026940	MS.gene89216	PPI
MS.gene026940	MS.gene35562	PPI
MS.gene02545	MS.gene026940	PPI
MS.gene053319	MS.gene026940	PPI
MS.gene04915	MS.gene026940	PPI
MS.gene61009	MS.gene026940	PPI
MS.gene64327	MS.gene026940	PPI
MS.gene074100	MS.gene026940	PPI
MS.gene026618	MS.gene026940	PPI
MS.gene64316	MS.gene026940	PPI
MS.gene68345	MS.gene026940	PPI
MS.gene066863	MS.gene026940	PPI
MS.gene89216	MS.gene026940	PPI
MS.gene026940	MS.gene64316	PPI
MS.gene001246	MS.gene026940	PPI
MS.gene026940	MS.gene29793	PPI
MS.gene026940	MS.gene98294	PPI
MS.gene62258	MS.gene026940	PPI
MS.gene64310	MS.gene026940	PPI
MS.gene55545	MS.gene026940	PPI
MS.gene026940	MS.gene64317	PPI
MS.gene64311	MS.gene026940	PPI
MS.gene040331	MS.gene026940	PPI
MS.gene58906	MS.gene026940	PPI
MS.gene066862	MS.gene026940	PPI
MS.gene026940	MS.gene64310	PPI
MS.gene036915	MS.gene026940	PPI
MS.gene64308	MS.gene026940	PPI
MS.gene026940	MS.gene057293	PPI
MS.gene58860	MS.gene026940	PPI
MS.gene026940	MS.gene71207	PPI
MS.gene64313	MS.gene026940	PPI
MS.gene83068	MS.gene026940	PPI
MS.gene93087	MS.gene026940	PPI
MS.gene62689	MS.gene026940	PPI
MS.gene49270	MS.gene026940	PPI
MS.gene97948	MS.gene026940	PPI
MS.gene000738	MS.gene026940	PPI
MS.gene64307	MS.gene026940	PPI
MS.gene62540	MS.gene026940	PPI
MS.gene061261	MS.gene026940	PPI
MS.gene022456	MS.gene026940	PPI
MS.gene04917	MS.gene026940	PPI
MS.gene062239	MS.gene026940	PPI
MS.gene46886	MS.gene026940	PPI
MS.gene026530	MS.gene026940	PPI
MS.gene47195	MS.gene026940	PPI
MS.gene92789	MS.gene026940	PPI
MS.gene026940	MS.gene21696	PPI
MS.gene013748	MS.gene026940	PPI
MS.gene026940	MS.gene074045	PPI
MS.gene03228	MS.gene026940	PPI
MS.gene026940	MS.gene85596	PPI
MS.gene28338	MS.gene026940	PPI
MS.gene026940	MS.gene025797	PPI
MS.gene94551	MS.gene026940	PPI
MS.gene65954	MS.gene026940	PPI
MS.gene008225	MS.gene026940	PPI
MS.gene026940	MS.gene64314	PPI
MS.gene056383	MS.gene026940	PPI
MS.gene64324	MS.gene026940	PPI
MS.gene011400	MS.gene026940	PPI
MS.gene015470	MS.gene026940	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026940.t1	MTR_6g007613	98.225	169	3	0	7	175	2	170	9.96e-121	338
MS.gene026940.t1	MTR_7g074020	92.308	169	13	0	7	175	3	171	1.73e-114	322
MS.gene026940.t1	MTR_6g007613	97.987	149	3	0	7	155	2	150	7.34e-104	295
MS.gene026940.t1	MTR_7g074020	93.289	149	10	0	7	155	3	151	1.63e-99	284
MS.gene026940.t1	MTR_5g088320	45.455	143	78	0	26	168	4	146	1.42e-38	129
MS.gene026940.t1	MTR_5g088320	43.421	76	43	0	23	98	74	149	2.11e-12	62.0
MS.gene026940.t1	MTR_6g025320	45.455	143	78	0	26	168	4	146	3.18e-38	128
MS.gene026940.t1	MTR_6g025320	43.421	76	43	0	23	98	74	149	2.20e-12	62.0
MS.gene026940.t1	MTR_7g087610	44.755	143	79	0	26	168	4	146	8.45e-38	127
MS.gene026940.t1	MTR_7g087610	44.737	76	42	0	23	98	74	149	4.34e-13	63.5
MS.gene026940.t1	MTR_1g076650	43.056	144	82	0	25	168	3	146	2.27e-37	126
MS.gene026940.t1	MTR_1g076650	43.836	73	41	0	23	95	74	146	9.41e-13	62.8
MS.gene026940.t1	MTR_1g041285	45.926	135	73	0	34	168	12	146	4.21e-35	120
MS.gene026940.t1	MTR_1g041285	44.444	63	35	0	33	95	84	146	7.40e-11	57.8
MS.gene026940.t1	MTR_1g071150	40.136	147	85	2	25	169	3	148	1.60e-28	103
MS.gene026940.t1	MTR_0168s0120	43.636	110	62	0	59	168	1	110	1.09e-26	97.8
MS.gene026940.t1	MTR_0168s0120	43.421	76	43	0	23	98	38	113	7.99e-13	62.0
MS.gene026940.t1	MTR_6g025320	43.636	110	62	0	59	168	1	110	1.09e-26	97.8
MS.gene026940.t1	MTR_6g025320	43.421	76	43	0	23	98	38	113	7.99e-13	62.0
MS.gene026940.t1	MTR_1g032070	36.111	144	92	0	30	173	42	185	5.84e-23	90.9
MS.gene026940.t1	MTR_7g106710	37.500	136	82	2	35	170	441	573	7.57e-23	94.7
MS.gene026940.t1	MTR_1g055255	38.235	136	81	2	35	170	430	562	1.26e-22	94.0
MS.gene026940.t1	MTR_7g115040	39.259	135	82	0	34	168	12	146	1.22e-21	85.9
MS.gene026940.t1	MTR_8g105230	34.266	143	90	1	22	164	28	166	1.24e-21	87.0
MS.gene026940.t1	MTR_8g095440	37.500	136	82	2	35	170	336	468	3.12e-21	90.1
MS.gene026940.t1	MTR_3g067610	36.429	140	85	2	32	171	3	138	5.35e-21	84.0
MS.gene026940.t1	MTR_7g075040	34.615	156	93	4	22	168	35	190	9.47e-21	85.1
MS.gene026940.t1	MTR_3g098070	36.765	136	83	2	35	170	335	467	1.71e-20	87.8
MS.gene026940.t1	MTR_8g036075	37.063	143	82	3	34	168	49	191	2.05e-20	84.0
MS.gene026940.t1	MTR_3g098090	34.839	155	94	3	20	170	319	470	2.41e-20	87.4
MS.gene026940.t1	MTR_8g107110	34.559	136	88	1	34	169	24	158	2.98e-20	82.8
MS.gene026940.t1	MTR_4g067270	31.690	142	95	1	34	173	5	146	4.08e-20	82.0
MS.gene026940.t1	MTR_5g079340	34.815	135	87	1	34	168	4	137	1.09e-19	80.9
MS.gene026940.t1	MTR_5g079340	37.500	80	47	2	20	96	59	138	8.54e-11	57.4
MS.gene026940.t1	MTR_8g066630	29.114	158	109	1	19	173	2	159	2.37e-19	80.5
MS.gene026940.t1	MTR_1g046950	33.813	139	90	1	34	170	4	142	2.82e-19	79.7
MS.gene026940.t1	MTR_1g046950	39.394	66	40	0	31	96	76	141	1.45e-11	59.7
MS.gene026940.t1	MTR_5g092810	38.514	148	79	5	26	168	389	529	3.62e-19	84.3
MS.gene026940.t1	MTR_8g099095	37.226	137	82	3	35	170	372	505	3.79e-19	84.0
MS.gene026940.t1	MTR_1g096490	33.824	136	87	2	35	170	336	468	3.92e-19	84.0
MS.gene026940.t1	MTR_0028s0170	35.766	137	84	3	35	170	384	517	7.09e-19	83.2
MS.gene026940.t1	MTR_5g009830	35.766	137	84	3	35	170	372	505	9.14e-19	82.8
MS.gene026940.t1	MTR_5g011850	29.577	142	98	1	27	168	5	144	1.54e-18	77.8
MS.gene026940.t1	MTR_5g099240	33.824	136	87	2	35	170	402	534	3.54e-18	81.3
MS.gene026940.t1	MTR_5g099240	33.824	136	87	2	35	170	330	462	3.58e-18	81.3
MS.gene026940.t1	MTR_1g041150	33.094	139	90	2	35	173	424	559	4.55e-18	80.9
MS.gene026940.t1	MTR_5g089320	34.307	137	86	3	35	170	374	507	9.59e-18	80.1
MS.gene026940.t1	MTR_4g112460	29.078	141	98	2	34	172	11	151	9.71e-18	76.3
MS.gene026940.t1	MTR_7g106710	35.537	121	75	2	35	155	441	558	1.50e-17	79.7
MS.gene026940.t1	MTR_4g107490	33.333	144	93	3	26	168	370	511	9.14e-17	77.4
MS.gene026940.t1	MTR_1g054865	31.655	139	92	2	35	173	467	602	1.40e-16	76.6
MS.gene026940.t1	MTR_4g132070	33.775	151	95	4	26	175	388	534	1.51e-16	76.6
MS.gene026940.t1	MTR_4g086260	30.729	192	113	5	1	175	7	195	3.32e-16	73.2
MS.gene026940.t1	MTR_1g026190	32.867	143	86	4	35	173	388	524	3.97e-16	75.5
MS.gene026940.t1	MTR_7g090450	31.915	141	91	3	34	169	73	213	5.37e-16	72.8
MS.gene026940.t1	MTR_7g090450	48.529	68	34	1	29	95	145	212	3.65e-12	62.4
MS.gene026940.t1	MTR_7g089760	32.394	142	94	1	34	173	5	146	5.89e-16	71.2
MS.gene026940.t1	MTR_4g132040	35.915	142	86	4	35	175	401	538	7.10e-16	74.7
MS.gene026940.t1	MTR_8g078270	30.986	142	96	2	28	168	47	187	1.26e-15	71.2
MS.gene026940.t1	MTR_5g017510	33.803	142	89	4	31	169	45	184	4.51e-15	69.7
MS.gene026940.t1	MTR_5g017560	33.803	142	89	4	31	169	45	184	4.51e-15	69.7
MS.gene026940.t1	MTR_3g051770	34.722	144	79	5	35	168	389	527	5.92e-15	72.0
MS.gene026940.t1	MTR_5g017550	32.857	140	92	2	31	169	45	183	6.26e-15	69.3
MS.gene026940.t1	MTR_8g069915	25.170	147	108	1	28	172	6	152	9.18e-15	68.6
MS.gene026940.t1	MTR_6g079570	38.961	77	47	0	23	99	88	164	2.36e-14	67.8
MS.gene026940.t1	MTR_6g079570	31.429	140	86	3	34	168	26	160	2.21e-12	62.4
MS.gene026940.t1	MTR_7g068710	29.870	154	102	2	27	175	354	506	4.26e-14	69.7
MS.gene026940.t1	MTR_1g047100	31.387	137	91	2	34	168	4	139	6.47e-14	65.9
MS.gene026940.t1	MTR_1g047100	38.806	67	41	0	31	97	75	141	6.30e-11	57.8
MS.gene026940.t1	MTR_7g074240	26.705	176	109	4	10	172	6	174	1.66e-13	65.5
MS.gene026940.t1	MTR_3g089090	31.250	128	87	1	42	169	13	139	2.46e-13	64.3
MS.gene026940.t1	MTR_3g089070	31.250	128	87	1	42	169	14	140	2.88e-13	63.9
MS.gene026940.t1	MTR_4g103650	30.147	136	94	1	34	169	2	136	8.87e-13	62.8
MS.gene026940.t1	MTR_2g098890	28.472	144	99	2	34	173	64	207	2.03e-12	63.2
MS.gene026940.t1	MTR_5g008705	31.746	126	82	2	41	164	1	124	3.73e-12	60.8
MS.gene026940.t1	MTR_4g103630	29.630	135	94	1	34	168	6	139	4.10e-12	60.8
MS.gene026940.t1	MTR_3g083470	44.444	63	35	0	33	95	155	217	4.32e-12	62.4
MS.gene026940.t1	MTR_6g023460	30.534	131	90	1	38	168	12	141	5.84e-12	60.5
MS.gene026940.t1	MTR_3g055570	29.252	147	89	1	19	165	37	168	7.06e-12	61.2
MS.gene026940.t1	MTR_4g103655	29.412	136	95	1	34	169	6	140	8.88e-12	60.1
MS.gene026940.t1	MTR_4g115170	29.487	156	90	4	32	168	62	216	1.31e-11	61.2
MS.gene026940.t1	MTR_3g055520	29.078	141	85	1	27	167	45	170	2.15e-11	59.7
MS.gene026940.t1	MTR_1g052530	30.137	146	95	5	26	168	349	490	2.43e-11	61.6
MS.gene026940.t1	MTR_7g091890	26.573	143	104	1	26	168	355	496	5.38e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene026940.t1	AT3G50360	77.246	167	36	1	7	173	2	166	3.19e-84	246
MS.gene026940.t1	AT4G37010	67.114	149	49	0	25	173	22	170	7.21e-67	202
MS.gene026940.t1	AT4G37010	67.114	149	49	0	25	173	18	166	9.49e-67	201
MS.gene026940.t1	AT5G37780	45.455	143	78	0	26	168	4	146	4.91e-39	130
MS.gene026940.t1	AT5G37780	48.485	66	34	0	33	98	84	149	1.45e-12	62.4
MS.gene026940.t1	AT1G66410	45.455	143	78	0	26	168	4	146	4.91e-39	130
MS.gene026940.t1	AT1G66410	48.485	66	34	0	33	98	84	149	1.45e-12	62.4
MS.gene026940.t1	AT2G27030	45.455	143	78	0	26	168	4	146	1.80e-38	130
MS.gene026940.t1	AT2G27030	43.421	76	43	0	23	98	74	149	1.64e-12	62.8
MS.gene026940.t1	AT3G56800	45.455	143	78	0	26	168	4	146	2.48e-38	129
MS.gene026940.t1	AT3G56800	43.421	76	43	0	23	98	74	149	1.79e-12	62.0
MS.gene026940.t1	AT2G27030	45.455	143	78	0	26	168	4	146	2.48e-38	129
MS.gene026940.t1	AT2G27030	43.421	76	43	0	23	98	74	149	1.79e-12	62.0
MS.gene026940.t1	AT2G41110	45.455	143	78	0	26	168	4	146	2.48e-38	129
MS.gene026940.t1	AT2G41110	43.421	76	43	0	23	98	74	149	1.79e-12	62.0
MS.gene026940.t1	AT3G43810	45.455	143	78	0	26	168	4	146	3.33e-38	128
MS.gene026940.t1	AT3G43810	43.421	76	43	0	23	98	74	149	2.30e-12	62.0
MS.gene026940.t1	AT3G43810	45.775	142	77	0	27	168	5	146	4.85e-38	130
MS.gene026940.t1	AT3G43810	46.154	65	35	0	33	97	84	148	1.70e-11	60.8
MS.gene026940.t1	AT5G21274	44.755	143	79	0	26	168	4	146	1.01e-37	127
MS.gene026940.t1	AT5G21274	42.105	76	44	0	23	98	74	149	7.33e-12	60.5
MS.gene026940.t1	AT3G22930	42.958	142	81	0	27	168	28	169	2.63e-35	122
MS.gene026940.t1	AT5G37780	41.139	158	78	1	26	168	4	161	2.92e-35	121
MS.gene026940.t1	AT5G37780	48.485	66	34	0	33	98	99	164	1.80e-12	62.4
MS.gene026940.t1	AT2G41110	41.935	155	78	1	26	168	4	158	1.09e-34	120
MS.gene026940.t1	AT2G41110	43.421	76	43	0	23	98	86	161	3.25e-12	61.6
MS.gene026940.t1	AT4G14640	41.549	142	83	0	27	168	6	147	8.59e-34	117
MS.gene026940.t1	AT5G37780	38.462	169	78	1	26	168	4	172	2.54e-33	117
MS.gene026940.t1	AT5G37780	48.485	66	34	0	33	98	110	175	2.00e-12	62.4
MS.gene026940.t1	AT1G66410	42.484	153	78	1	26	168	4	156	5.78e-33	115
MS.gene026940.t1	AT1G66410	48.485	66	34	0	33	98	94	159	1.54e-12	62.4
MS.gene026940.t1	AT5G37780	43.443	122	69	0	47	168	12	133	9.32e-31	108
MS.gene026940.t1	AT5G37780	48.485	66	34	0	33	98	71	136	8.63e-13	62.8
MS.gene026940.t1	AT1G66410	43.636	110	62	0	59	168	1	110	3.62e-27	99.4
MS.gene026940.t1	AT1G66410	48.485	66	34	0	33	98	48	113	3.99e-13	62.8
MS.gene026940.t1	AT1G66410	43.636	110	62	0	59	168	1	110	3.62e-27	99.4
MS.gene026940.t1	AT1G66410	48.485	66	34	0	33	98	48	113	3.99e-13	62.8
MS.gene026940.t1	AT3G43810	43.636	110	62	0	59	168	1	110	1.14e-26	97.8
MS.gene026940.t1	AT3G43810	43.421	76	43	0	23	98	38	113	8.37e-13	62.0
MS.gene026940.t1	AT3G43810	43.636	110	62	0	59	168	1	110	1.14e-26	97.8
MS.gene026940.t1	AT3G43810	43.421	76	43	0	23	98	38	113	8.37e-13	62.0
MS.gene026940.t1	AT4G14640	38.843	121	74	0	48	168	9	129	4.38e-26	97.1
MS.gene026940.t1	AT4G14640	50.794	63	31	0	33	95	67	129	4.65e-14	65.9
MS.gene026940.t1	AT1G24620	35.065	154	98	1	21	174	26	177	8.01e-26	97.8
MS.gene026940.t1	AT3G22930	41.905	105	61	0	26	130	27	131	5.81e-24	91.7
MS.gene026940.t1	AT5G23580	38.971	136	80	2	35	170	328	460	7.16e-23	94.7
MS.gene026940.t1	AT3G51920	34.014	147	97	0	27	173	5	151	3.19e-22	87.8
MS.gene026940.t1	AT4G14640	40.777	103	61	0	27	129	6	108	4.87e-22	86.3
MS.gene026940.t1	AT2G41100	33.962	159	88	2	27	168	59	217	7.25e-22	89.7
MS.gene026940.t1	AT2G41100	33.333	105	67	1	13	117	135	236	6.66e-13	65.5
MS.gene026940.t1	AT2G41100	33.962	159	88	2	27	168	59	217	7.25e-22	89.7
MS.gene026940.t1	AT2G41100	33.333	105	67	1	13	117	135	236	6.66e-13	65.5
MS.gene026940.t1	AT2G41100	33.962	159	88	2	27	168	59	217	7.25e-22	89.7
MS.gene026940.t1	AT2G41100	33.333	105	67	1	13	117	135	236	6.66e-13	65.5
MS.gene026940.t1	AT2G41100	33.962	159	88	2	27	168	94	252	1.35e-21	89.7
MS.gene026940.t1	AT2G41100	30.625	160	95	2	27	170	5	164	8.37e-19	82.0
MS.gene026940.t1	AT2G41100	33.333	105	67	1	13	117	170	271	9.02e-13	65.5
MS.gene026940.t1	AT2G41100	33.962	159	88	2	27	168	94	252	1.35e-21	89.7
MS.gene026940.t1	AT2G41100	30.625	160	95	2	27	170	5	164	8.37e-19	82.0
MS.gene026940.t1	AT2G41100	33.333	105	67	1	13	117	170	271	9.02e-13	65.5
MS.gene026940.t1	AT5G19360	38.235	136	82	2	35	170	374	507	1.86e-21	90.9
MS.gene026940.t1	AT2G41090	32.639	144	94	1	25	168	3	143	8.72e-21	85.1
MS.gene026940.t1	AT2G43290	33.784	148	91	3	33	173	64	211	1.05e-20	85.5
MS.gene026940.t1	AT1G05990	34.965	143	90	2	34	173	5	147	2.09e-20	82.8
MS.gene026940.t1	AT4G09570	35.294	136	85	2	35	170	331	463	3.00e-20	87.4
MS.gene026940.t1	AT1G18530	30.405	148	100	2	30	175	4	150	3.64e-20	82.4
MS.gene026940.t1	AT5G12180	36.765	136	84	2	35	170	379	512	3.75e-20	87.0
MS.gene026940.t1	AT1G12310	30.137	146	100	1	23	168	2	145	1.01e-19	81.3
MS.gene026940.t1	AT1G62820	30.137	146	100	1	23	168	2	145	1.03e-19	81.3
MS.gene026940.t1	AT1G35670	34.559	136	86	2	35	170	332	464	1.19e-19	85.5
MS.gene026940.t1	AT1G73630	29.801	151	102	1	19	169	5	151	1.90e-19	80.9
MS.gene026940.t1	AT3G25600	30.282	142	97	1	33	172	11	152	2.15e-19	80.5
MS.gene026940.t1	AT2G36180	37.500	144	87	2	35	175	1	144	4.00e-19	79.3
MS.gene026940.t1	AT1G18210	32.353	136	88	1	33	168	22	153	6.46e-19	79.7
MS.gene026940.t1	AT1G18210	42.857	63	36	0	34	96	92	154	3.50e-11	59.3
MS.gene026940.t1	AT1G18210	32.353	136	88	1	33	168	22	153	6.46e-19	79.7
MS.gene026940.t1	AT1G18210	42.857	63	36	0	34	96	92	154	3.50e-11	59.3
MS.gene026940.t1	AT1G66400	31.847	157	101	3	20	172	3	157	6.97e-19	79.3
MS.gene026940.t1	AT1G32250	30.822	146	95	1	34	173	16	161	8.21e-19	79.3
MS.gene026940.t1	AT3G20410	36.957	138	81	3	33	168	395	528	8.38e-19	83.2
MS.gene026940.t1	AT3G20410	36.957	138	81	3	33	168	395	528	8.38e-19	83.2
MS.gene026940.t1	AT3G59440	30.556	144	97	2	34	175	51	193	1.36e-18	79.3
MS.gene026940.t1	AT1G50700	36.232	138	82	3	33	168	377	510	3.93e-18	81.3
MS.gene026940.t1	AT2G17290	34.559	136	86	2	35	170	391	523	6.00e-18	80.9
MS.gene026940.t1	AT2G17290	34.559	136	86	2	35	170	391	523	6.00e-18	80.9
MS.gene026940.t1	AT1G61950	35.862	145	83	4	35	175	405	543	1.23e-17	79.7
MS.gene026940.t1	AT1G76040	35.227	176	101	6	4	170	141	312	1.37e-17	79.0
MS.gene026940.t1	AT1G76040	35.227	176	101	6	4	170	141	312	1.37e-17	79.0
MS.gene026940.t1	AT2G15680	29.825	171	111	2	6	169	15	183	1.97e-17	76.3
MS.gene026940.t1	AT1G76040	37.415	147	86	4	26	170	408	550	2.02e-17	79.3
MS.gene026940.t1	AT5G37770	32.857	140	90	1	34	169	17	156	2.24e-17	75.5
MS.gene026940.t1	AT5G37770	32.857	140	90	1	34	169	17	156	2.24e-17	75.5
MS.gene026940.t1	AT4G38230	33.824	136	87	2	35	170	360	492	2.77e-17	79.0
MS.gene026940.t1	AT4G38230	33.824	136	87	2	35	170	186	318	3.16e-17	77.8
MS.gene026940.t1	AT2G38910	33.094	139	90	2	35	173	440	575	3.30e-17	78.6
MS.gene026940.t1	AT4G38230	33.824	136	87	2	35	170	330	462	3.36e-17	78.6
MS.gene026940.t1	AT4G38230	33.824	136	87	2	35	170	330	462	3.36e-17	78.6
MS.gene026940.t1	AT4G35310	33.824	136	87	2	35	170	403	535	3.39e-17	78.6
MS.gene026940.t1	AT4G35310	33.824	136	87	2	35	170	403	535	3.39e-17	78.6
MS.gene026940.t1	AT5G04870	33.094	139	90	2	35	173	456	591	4.09e-17	78.2
MS.gene026940.t1	AT4G21940	36.029	136	81	3	35	168	407	538	4.45e-17	78.2
MS.gene026940.t1	AT4G21940	36.029	136	81	3	35	168	407	538	4.52e-17	78.2
MS.gene026940.t1	AT4G04720	34.783	138	88	2	35	172	385	520	6.06e-17	77.8
MS.gene026940.t1	AT4G04720	34.783	138	88	2	35	172	385	520	6.06e-17	77.8
MS.gene026940.t1	AT3G10660	32.374	139	91	2	35	173	492	627	9.19e-17	77.4
MS.gene026940.t1	AT3G10660	32.374	139	91	2	35	173	492	627	9.19e-17	77.4
MS.gene026940.t1	AT4G04710	34.965	143	89	3	27	168	330	469	4.82e-16	75.1
MS.gene026940.t1	AT4G04710	34.965	143	89	3	27	168	316	455	5.43e-16	75.1
MS.gene026940.t1	AT4G04710	34.965	143	89	3	27	168	343	482	5.74e-16	75.1
MS.gene026940.t1	AT4G23650	32.353	136	90	2	35	170	384	517	6.03e-16	75.1
MS.gene026940.t1	AT4G03290	29.655	145	97	2	34	173	5	149	6.94e-16	71.2
MS.gene026940.t1	AT4G12860	29.861	144	99	1	32	173	3	146	3.79e-15	69.3
MS.gene026940.t1	AT5G17470	35.766	137	86	2	35	169	3	139	4.67e-15	68.9
MS.gene026940.t1	AT5G42380	29.412	136	95	1	34	168	49	184	5.83e-15	69.7
MS.gene026940.t1	AT4G04710	35.172	145	88	4	27	168	343	484	7.49e-15	71.6
MS.gene026940.t1	AT4G04740	33.824	136	84	3	35	168	374	505	8.35e-15	71.6
MS.gene026940.t1	AT4G04740	33.824	136	84	3	35	168	374	505	8.35e-15	71.6
MS.gene026940.t1	AT4G04740	33.824	136	84	3	35	168	374	505	8.35e-15	71.6
MS.gene026940.t1	AT4G04740	33.824	136	84	3	35	168	374	505	8.35e-15	71.6
MS.gene026940.t1	AT4G04740	33.824	136	84	3	35	168	374	505	8.35e-15	71.6
MS.gene026940.t1	AT4G04740	33.824	136	84	3	35	168	374	505	8.35e-15	71.6
MS.gene026940.t1	AT4G04700	31.973	147	98	2	26	172	328	472	1.05e-14	71.2
MS.gene026940.t1	AT3G07490	30.282	142	97	1	34	173	5	146	1.82e-14	67.4
MS.gene026940.t1	AT4G04695	31.293	147	99	2	26	172	328	472	2.66e-14	70.1
MS.gene026940.t1	AT3G10190	31.944	144	95	3	28	169	64	206	3.31e-14	68.2
MS.gene026940.t1	AT1G74740	29.861	144	98	3	26	168	356	497	4.70e-14	69.3
MS.gene026940.t1	AT1G50700	30.488	164	82	4	33	168	377	536	8.46e-14	68.9
MS.gene026940.t1	AT5G12480	28.472	144	101	2	26	168	262	404	9.81e-14	68.6
MS.gene026940.t1	AT5G12480	28.472	144	101	2	26	168	356	498	1.01e-13	68.6
MS.gene026940.t1	AT3G50770	30.282	142	94	2	32	168	62	203	1.39e-13	66.2
MS.gene026940.t1	AT2G41100	33.333	105	67	1	13	117	45	146	2.08e-13	65.9
MS.gene026940.t1	AT2G41100	31.496	127	70	2	59	168	1	127	2.83e-13	65.5
MS.gene026940.t1	AT3G51850	29.221	154	103	2	27	175	352	504	4.04e-13	66.6
MS.gene026940.t1	AT2G41100	36.264	91	55	1	27	117	5	92	4.90e-13	63.5
MS.gene026940.t1	AT3G03000	26.974	152	110	1	23	173	9	160	5.90e-13	63.9
MS.gene026940.t1	AT1G76640	28.369	141	99	1	30	168	18	158	1.32e-12	62.8
MS.gene026940.t1	AT3G57530	28.472	144	99	3	26	168	360	500	1.49e-12	65.1
MS.gene026940.t1	AT2G41410	31.159	138	92	3	34	168	70	207	1.81e-12	63.5
MS.gene026940.t1	AT3G03400	31.452	124	83	1	35	156	6	129	3.71e-12	60.8
MS.gene026940.t1	AT2G41860	28.276	145	99	3	26	168	351	492	4.14e-12	63.9
MS.gene026940.t1	AT2G41860	28.276	145	99	3	26	168	351	492	4.30e-12	63.9
MS.gene026940.t1	AT1G18890	31.034	145	95	4	26	168	360	501	5.05e-12	63.5
MS.gene026940.t1	AT4G04740	32.520	123	77	3	35	155	374	492	2.48e-11	61.6
MS.gene026940.t1	AT1G76650	28.261	138	98	1	31	168	40	176	3.53e-11	59.3
MS.gene026940.t1	AT1G76650	28.261	138	98	1	31	168	40	176	3.53e-11	59.3

Find 35 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGAGGTAACTTACTATTT+TGG	0.204342	6.3:+3188536	None:intergenic
AGTGTCCCTTTCTCCTATTT+TGG	0.217249	6.3:+3188777	None:intergenic
TTGTTTATTGTTGAACCTCC+TGG	0.358744	6.3:+3189583	None:intergenic
TATCAGTCGTCTATACTTAG+AGG	0.410394	6.3:-3189611	MS.gene026940:CDS
GTCTCTTCTGAGGCGTCAAA+TGG	0.418526	6.3:+3189549	None:intergenic
CACATGATGACAGCCAAAAT+AGG	0.422157	6.3:-3188790	MS.gene026940:CDS
ACTAGTGACGGAAGCTTGTT+CGG	0.446170	6.3:+3187037	None:intergenic
TTTAGGTACTATTGATGCTA+AGG	0.463126	6.3:-3189394	MS.gene026940:intron
ATCATCATGACGAATTCCTC+GGG	0.465354	6.3:+3187063	None:intergenic
CTTCTGTCATTTCAAATCCA+AGG	0.487886	6.3:+3189258	None:intergenic
CTATACTTAGAGGGGAGTCC+AGG	0.494715	6.3:-3189601	MS.gene026940:CDS
GACAGCCAAAATAGGAGAAA+GGG	0.501897	6.3:-3188782	MS.gene026940:CDS
TTCTGTCATTTCAAATCCAA+GGG	0.512469	6.3:+3189259	None:intergenic
CATCATCATGACGAATTCCT+CGG	0.513311	6.3:+3187062	None:intergenic
TTTGAATTATTCGATACTGA+TGG	0.525178	6.3:-3189509	MS.gene026940:CDS
GATGTAGACAAGGATGGAAG+TGG	0.527094	6.3:-3188838	MS.gene026940:CDS
TTGATCTCTTGTCTCTTCTG+AGG	0.531717	6.3:+3189539	None:intergenic
TTATTCGATACTGATGGCTC+AGG	0.532150	6.3:-3189503	MS.gene026940:intron
TCAGAAGAGACAAGAGATCA+AGG	0.536774	6.3:-3189537	MS.gene026940:CDS
TGACAGCCAAAATAGGAGAA+AGG	0.538729	6.3:-3188783	MS.gene026940:CDS
AAGCGCATTGCAAAAGAGCT+TGG	0.551415	6.3:-3188607	MS.gene026940:CDS
ATCAGTCGTCTATACTTAGA+GGG	0.554352	6.3:-3189610	MS.gene026940:CDS
AGGAGAAAGGGACACTAAAG+AGG	0.561951	6.3:-3188770	MS.gene026940:CDS
TGATAGAGAGATTCAAGAGA+TGG	0.573307	6.3:-3188572	MS.gene026940:CDS
CTAAGTATAGACGACTGATA+CGG	0.583907	6.3:+3189614	None:intergenic
TACATATGACTGACTAGTGA+CGG	0.596575	6.3:+3187025	None:intergenic
TGGATTTGAAATGACAGAAG+AGG	0.602560	6.3:-3189255	MS.gene026940:intron
ATAGCAGATGTAGACAAGGA+TGG	0.613849	6.3:-3188844	MS.gene026940:CDS
ACAACATGCAGATGATCGTG+AGG	0.638119	6.3:-3187091	MS.gene026940:intron
TGATCGTGAGGTTGACCCCG+AGG	0.649240	6.3:-3187079	MS.gene026940:CDS
TACTTAGAGGGGAGTCCAGG+AGG	0.655241	6.3:-3189598	MS.gene026940:CDS
AATGATAGCAGATGTAGACA+AGG	0.677539	6.3:-3188848	MS.gene026940:CDS
TCAGTCGTCTATACTTAGAG+GGG	0.701453	6.3:-3189609	MS.gene026940:CDS
AGGAGCTGAATGTTGCCATG+AGG	0.727665	6.3:-3189374	MS.gene026940:intron
TCATCATGACGAATTCCTCG+GGG	0.759865	6.3:+3187064	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAAGATTAAAGTGAATATT+AGG	-	chr6.3:3188608-3188627	MS.gene026940:CDS	15.0%
!!	TTGTCATGTTAAATATTAAT+TGG	-	chr6.3:3187340-3187359	MS.gene026940:intron	15.0%
!!!	TCGAAATTATATCTTTTTAT+CGG	-	chr6.3:3188461-3188480	MS.gene026940:intron	15.0%
!!	AATTTATCATACAACAAACA+TGG	+	chr6.3:3189385-3189404	None:intergenic	20.0%
!!	CATAATAGTTACAAAATACT+GGG	+	chr6.3:3187538-3187557	None:intergenic	20.0%
!!	TAATGAATGTAGAATAACAA+TGG	-	chr6.3:3187686-3187705	MS.gene026940:intron	20.0%
!!	TCATAATAGTTACAAAATAC+TGG	+	chr6.3:3187539-3187558	None:intergenic	20.0%
!!	TGCTAACAAAAAACTAATTA+TGG	+	chr6.3:3188389-3188408	None:intergenic	20.0%
!!!	ATATTTTTACGCAACATTTT+TGG	-	chr6.3:3189543-3189562	MS.gene026940:CDS	20.0%
!!!	TTTTGTCTTGATCAATAATA+TGG	+	chr6.3:3187933-3187952	None:intergenic	20.0%
!	AAAACTGTTATCCTTAAATG+AGG	+	chr6.3:3188495-3188514	None:intergenic	25.0%
!	AAACTGTTATCCTTAAATGA+GGG	+	chr6.3:3188494-3188513	None:intergenic	25.0%
!	AAGCAAAACTAATGATGTAT+AGG	+	chr6.3:3187973-3187992	None:intergenic	25.0%
!	AATTACCAAGAATCAAACAT+AGG	+	chr6.3:3189505-3189524	None:intergenic	25.0%
!	TAAAAATATCTCGCATACAT+TGG	+	chr6.3:3189532-3189551	None:intergenic	25.0%
!	TATAGAACTCTAACAAAGAA+TGG	+	chr6.3:3187744-3187763	None:intergenic	25.0%
!	TGATGTTAGTCAATATGTAA+AGG	-	chr6.3:3188939-3188958	MS.gene026940:intron	25.0%
!	TTAGTCAATATGTAAAGGAA+GGG	-	chr6.3:3188944-3188963	MS.gene026940:intron	25.0%
!	TTCGAATAAATGAATGTACT+TGG	+	chr6.3:3187444-3187463	None:intergenic	25.0%
!	TTTAAAGAACAAAAGCTGAT+GGG	+	chr6.3:3187612-3187631	None:intergenic	25.0%
!	TTTGAATTATTCGATACTGA+TGG	-	chr6.3:3187152-3187171	MS.gene026940:intron	25.0%
!!	AAGTCAAAGTATTAGCATAA+AGG	+	chr6.3:3187239-3187258	None:intergenic	25.0%
!!	AGGTATTGTTGTTATTCATA+AGG	-	chr6.3:3187307-3187326	MS.gene026940:intron	25.0%
!!	AGTCAAAGTATTAGCATAAA+GGG	+	chr6.3:3187238-3187257	None:intergenic	25.0%
!!	TCATTTAAGGATAACAGTTT+TGG	-	chr6.3:3188494-3188513	MS.gene026940:intron	25.0%
!!	TTTACATATTGACTAACATC+AGG	+	chr6.3:3188940-3188959	None:intergenic	25.0%
!!!	AATTTTAACACACATAGAAC+TGG	+	chr6.3:3187571-3187590	None:intergenic	25.0%
!!!	CTTTGACTTTGATGATTTTT+AGG	-	chr6.3:3187250-3187269	MS.gene026940:intron	25.0%
!!!	GTATTTTTGAATGATTACAG+AGG	-	chr6.3:3188893-3188912	MS.gene026940:intron	25.0%
!!!	TTTTAGGTAAAACTTAAGTG+TGG	+	chr6.3:3189194-3189213	None:intergenic	25.0%
	AATCATTCAAAAATACCCCT+AGG	+	chr6.3:3188889-3188908	None:intergenic	30.0%
	ATAAACTATGTGAGATGTAC+AGG	+	chr6.3:3188182-3188201	None:intergenic	30.0%
	CTTTCAAAGCAGAAAAATAC+AGG	+	chr6.3:3188314-3188333	None:intergenic	30.0%
	GTTAGTCAATATGTAAAGGA+AGG	-	chr6.3:3188943-3188962	MS.gene026940:intron	30.0%
	GTTCTTTAAACATTTAGCTG+TGG	-	chr6.3:3187622-3187641	MS.gene026940:intron	30.0%
	GTTTAAAGAACAAAAGCTGA+TGG	+	chr6.3:3187613-3187632	None:intergenic	30.0%
	TGAATAACAACAATACCTCA+TGG	+	chr6.3:3187305-3187324	None:intergenic	30.0%
	TTTAGGTACTATTGATGCTA+AGG	-	chr6.3:3187267-3187286	MS.gene026940:intron	30.0%
!	ACTGAGGTAACTTACTATTT+TGG	+	chr6.3:3188128-3188147	None:intergenic	30.0%
!	ATACTGGGAATAATTTTCCA+CGG	+	chr6.3:3187523-3187542	None:intergenic	30.0%
!	GTCAAAGTATTAGCATAAAG+GGG	+	chr6.3:3187237-3187256	None:intergenic	30.0%
!	TTCTGTCATTTCAAATCCAA+GGG	+	chr6.3:3187405-3187424	None:intergenic	30.0%
!!	ACAGTTTTGGTCAATATCTT+TGG	-	chr6.3:3188507-3188526	MS.gene026940:intron	30.0%
!!	ATTTGCTCAATTTGCTGAAA+TGG	+	chr6.3:3187796-3187815	None:intergenic	30.0%
!!	TCAAAACTAAAGTGTTGCAT+CGG	-	chr6.3:3189066-3189085	MS.gene026940:intron	30.0%
!!	TCATTTCATTTGGTGGTTTT+AGG	+	chr6.3:3189210-3189229	None:intergenic	30.0%
!!!	AACATGCCTCTTATTTTTGT+AGG	-	chr6.3:3187378-3187397	MS.gene026940:intron	30.0%
!!!	ACATGCCTCTTATTTTTGTA+GGG	-	chr6.3:3187379-3187398	MS.gene026940:intron	30.0%
	AATGATAGCAGATGTAGACA+AGG	-	chr6.3:3187813-3187832	MS.gene026940:intron	35.0%
	AGGTAAAACTTAAGTGTGGA+GGG	+	chr6.3:3189190-3189209	None:intergenic	35.0%
	AGTCACTATTTCCTACACAA+TGG	+	chr6.3:3188415-3188434	None:intergenic	35.0%
	AGTTCAACTAAACCTAACAG+TGG	+	chr6.3:3189282-3189301	None:intergenic	35.0%
	ATCAGTCGTCTATACTTAGA+GGG	-	chr6.3:3187051-3187070	MS.gene026940:CDS	35.0%
	ATTGCATTACGTAGTGAACT+GGG	-	chr6.3:3188206-3188225	MS.gene026940:intron	35.0%
	CAAAACACATGATATGGTGT+TGG	-	chr6.3:3188671-3188690	MS.gene026940:intron	35.0%
	CAGTGGAAAACAAAGGTAAA+TGG	-	chr6.3:3188573-3188592	MS.gene026940:CDS	35.0%
	CTAAGTATAGACGACTGATA+CGG	+	chr6.3:3187050-3187069	None:intergenic	35.0%
	GGATTATGTACAACATTGTC+AGG	-	chr6.3:3187707-3187726	MS.gene026940:intron	35.0%
	GTTATCCTTAAATGAGGGAA+GGG	+	chr6.3:3188489-3188508	None:intergenic	35.0%
	TACTAAAAAAAGAGCTACCG+AGG	+	chr6.3:3188156-3188175	None:intergenic	35.0%
	TACTCTGACAATTTGAGAGT+TGG	-	chr6.3:3188763-3188782	MS.gene026940:CDS	35.0%
	TAGGTAAAACTTAAGTGTGG+AGG	+	chr6.3:3189191-3189210	None:intergenic	35.0%
	TATCAGTCGTCTATACTTAG+AGG	-	chr6.3:3187050-3187069	MS.gene026940:CDS	35.0%
	TATTCGCATCCATGGTTAAA+CGG	+	chr6.3:3188811-3188830	None:intergenic	35.0%
	TCAATATGTAAAGGAAGGGT+AGG	-	chr6.3:3188948-3188967	MS.gene026940:intron	35.0%
	TGAGATACAGAGTGATCTAA+GGG	+	chr6.3:3189157-3189176	None:intergenic	35.0%
	TGATAGAGAGATTCAAGAGA+TGG	-	chr6.3:3188089-3188108	MS.gene026940:intron	35.0%
	TGATTCTCACTGCATATTTG+TGG	-	chr6.3:3187998-3188017	MS.gene026940:intron	35.0%
	TGGGTACAAAACACATGATA+TGG	-	chr6.3:3188665-3188684	MS.gene026940:intron	35.0%
	TGTTATCCTTAAATGAGGGA+AGG	+	chr6.3:3188490-3188509	None:intergenic	35.0%
	TTGTTTATTGTTGAACCTCC+TGG	+	chr6.3:3187081-3187100	None:intergenic	35.0%
!	ACTAAGGTGGAAAGTCTTAT+AGG	+	chr6.3:3189356-3189375	None:intergenic	35.0%
!	AGAATAGGGTGCTAATTAGT+TGG	-	chr6.3:3188721-3188740	MS.gene026940:intron	35.0%
!	CTTCTGTCATTTCAAATCCA+AGG	+	chr6.3:3187406-3187425	None:intergenic	35.0%
!	TCGAATAAACAAGAGCACAA+AGG	+	chr6.3:3188445-3188464	None:intergenic	35.0%
!	TGGATTTGAAATGACAGAAG+AGG	-	chr6.3:3187406-3187425	MS.gene026940:intron	35.0%
!!	AATTTGCTGAAATGGTACAG+TGG	+	chr6.3:3187788-3187807	None:intergenic	35.0%
!!	CATCGGTTTCATAGTTCTTA+TGG	-	chr6.3:3189083-3189102	MS.gene026940:intron	35.0%
!!	CTTCTACTGATTCAGAGATA+GGG	-	chr6.3:3187653-3187672	MS.gene026940:intron	35.0%
!!	TCTTCTACTGATTCAGAGAT+AGG	-	chr6.3:3187652-3187671	MS.gene026940:intron	35.0%
!!	TTGGTGTTAGTAAGGATGTA+GGG	-	chr6.3:3188782-3188801	MS.gene026940:CDS	35.0%
!!	TTTGAGAGTTGGTGTTAGTA+AGG	-	chr6.3:3188774-3188793	MS.gene026940:CDS	35.0%
!!!	ACCTGGCATTTACACTTTTT+TGG	-	chr6.3:3188645-3188664	MS.gene026940:intron	35.0%
!!!	CCTGGCATTTACACTTTTTT+GGG	-	chr6.3:3188646-3188665	MS.gene026940:intron	35.0%
	AAGGGCCCTACAAAAATAAG+AGG	+	chr6.3:3187387-3187406	None:intergenic	40.0%
	AGGTTTACAACCATATCACC+TGG	-	chr6.3:3188628-3188647	MS.gene026940:CDS	40.0%
	AGTGTAAATGCCAGGTGATA+TGG	+	chr6.3:3188641-3188660	None:intergenic	40.0%
	AGTTACCTCAGTCATATCCT+CGG	-	chr6.3:3188136-3188155	MS.gene026940:intron	40.0%
	ATAGCAGATGTAGACAAGGA+TGG	-	chr6.3:3187817-3187836	MS.gene026940:intron	40.0%
	ATCATCATGACGAATTCCTC+GGG	+	chr6.3:3189601-3189620	None:intergenic	40.0%
	ATGTGAGCAGTGGAAAACAA+AGG	-	chr6.3:3188566-3188585	MS.gene026940:CDS	40.0%
	CACATGATGACAGCCAAAAT+AGG	-	chr6.3:3187871-3187890	MS.gene026940:intron	40.0%
	CACTGCCTATGTTTGATTCT+TGG	-	chr6.3:3189497-3189516	MS.gene026940:intron	40.0%
	CATCATCATGACGAATTCCT+CGG	+	chr6.3:3189602-3189621	None:intergenic	40.0%
	CATTGCATTACGTAGTGAAC+TGG	-	chr6.3:3188205-3188224	MS.gene026940:intron	40.0%
	GACAGCCAAAATAGGAGAAA+GGG	-	chr6.3:3187879-3187898	MS.gene026940:intron	40.0%
	GCATATTTGTGGTCATTGCA+GGG	-	chr6.3:3188009-3188028	MS.gene026940:intron	40.0%
	GTCTTATAGGTGGTCTACAA+TGG	+	chr6.3:3189343-3189362	None:intergenic	40.0%
	GTGAGATACAGAGTGATCTA+AGG	+	chr6.3:3189158-3189177	None:intergenic	40.0%
	TAACACACATAGAACTGGCT+CGG	+	chr6.3:3187566-3187585	None:intergenic	40.0%
	TCAGAAGAGACAAGAGATCA+AGG	-	chr6.3:3187124-3187143	MS.gene026940:intron	40.0%
	TCAGTCGTCTATACTTAGAG+GGG	-	chr6.3:3187052-3187071	MS.gene026940:CDS	40.0%
	TGACAGCCAAAATAGGAGAA+AGG	-	chr6.3:3187878-3187897	MS.gene026940:intron	40.0%
	TGCATATTTGTGGTCATTGC+AGG	-	chr6.3:3188008-3188027	MS.gene026940:intron	40.0%
	TGCTCACATATGTATACCCT+TGG	+	chr6.3:3188555-3188574	None:intergenic	40.0%
	TTATTCGATACTGATGGCTC+AGG	-	chr6.3:3187158-3187177	MS.gene026940:intron	40.0%
	TTCTCGGTGGTCATTTCATT+TGG	+	chr6.3:3189220-3189239	None:intergenic	40.0%
	TTGATCTCTTGTCTCTTCTG+AGG	+	chr6.3:3187125-3187144	None:intergenic	40.0%
!	AAGAACAAAAGCTGATGGGT+AGG	+	chr6.3:3187608-3187627	None:intergenic	40.0%
!	AAGGTGGAAAGTCTTATAGG+TGG	+	chr6.3:3189353-3189372	None:intergenic	40.0%
!	ACAAACATGGACTGCAACTA+AGG	+	chr6.3:3189372-3189391	None:intergenic	40.0%
!	AGAACAAAAGCTGATGGGTA+GGG	+	chr6.3:3187607-3187626	None:intergenic	40.0%
!	AGTGTCCCTTTCTCCTATTT+TGG	+	chr6.3:3187887-3187906	None:intergenic	40.0%
!	CCCAAAAAAGTGTAAATGCC+AGG	+	chr6.3:3188649-3188668	None:intergenic	40.0%
!	TTTTCCACGGCAACAATCAA+TGG	+	chr6.3:3187510-3187529	None:intergenic	40.0%
!!	GGTGGAGATGTTTTTGCTTT+AGG	-	chr6.3:3188227-3188246	MS.gene026940:intron	40.0%
!!	GTTGGTGTTAGTAAGGATGT+AGG	-	chr6.3:3188781-3188800	MS.gene026940:CDS	40.0%
!!!	TCTTATTTTTGTAGGGCCCT+TGG	-	chr6.3:3187386-3187405	MS.gene026940:intron	40.0%
	AACATTGACACCAGACCCAT+AGG	+	chr6.3:3188852-3188871	None:intergenic	45.0%
	AAGCGCATTGCAAAAGAGCT+TGG	-	chr6.3:3188054-3188073	MS.gene026940:intron	45.0%
	AAGGAAGGGTAGGAGTCATA+TGG	-	chr6.3:3188958-3188977	MS.gene026940:intron	45.0%
	AATGAAACCCACTACTGCCA+AGG	-	chr6.3:3188535-3188554	MS.gene026940:intron	45.0%
	ACAACATGCAGATGATCGTG+AGG	-	chr6.3:3189570-3189589	MS.gene026940:CDS	45.0%
	AGGAAGGGTAGGAGTCATAT+GGG	-	chr6.3:3188959-3188978	MS.gene026940:intron	45.0%
	AGGAGAAAGGGACACTAAAG+AGG	-	chr6.3:3187891-3187910	MS.gene026940:intron	45.0%
	ATGAAACCCACTACTGCCAA+GGG	-	chr6.3:3188536-3188555	MS.gene026940:intron	45.0%
	ATGTATACCCTTGGCAGTAG+TGG	+	chr6.3:3188546-3188565	None:intergenic	45.0%
	CTAACAGTGGATGCTCTTCA+TGG	+	chr6.3:3189269-3189288	None:intergenic	45.0%
	CTGGCTAACAAGGCAGAATA+GGG	-	chr6.3:3188707-3188726	MS.gene026940:intron	45.0%
	GATGTAGACAAGGATGGAAG+TGG	-	chr6.3:3187823-3187842	MS.gene026940:intron	45.0%
	GGGTATACATATGTGAGCAG+TGG	-	chr6.3:3188556-3188575	MS.gene026940:CDS	45.0%
	GTAGGGTTACCGTTTAACCA+TGG	-	chr6.3:3188799-3188818	MS.gene026940:CDS	45.0%
	TCATCATGACGAATTCCTCG+GGG	+	chr6.3:3189600-3189619	None:intergenic	45.0%
	TCGGTGGTCATTTCATTTGG+TGG	+	chr6.3:3189217-3189236	None:intergenic	45.0%
	TGTATACCCTTGGCAGTAGT+GGG	+	chr6.3:3188545-3188564	None:intergenic	45.0%
	TGTTAGCAGAGCCATTGTGT+AGG	-	chr6.3:3188401-3188420	MS.gene026940:intron	45.0%
!	AACATGGACTGCAACTAAGG+TGG	+	chr6.3:3189369-3189388	None:intergenic	45.0%
!	TGGTGTCAATGTTCCAGCAA+TGG	-	chr6.3:3188859-3188878	MS.gene026940:CDS	45.0%
!!	CATGAAGAGCATCCACTGTT+AGG	-	chr6.3:3189267-3189286	MS.gene026940:intron	45.0%
	AAGGGTAGGAGTCATATGGG+TGG	-	chr6.3:3188962-3188981	MS.gene026940:intron	50.0%
	AGCTACCGAGGATATGACTG+AGG	+	chr6.3:3188144-3188163	None:intergenic	50.0%
	AGGAGCTGAATGTTGCCATG+AGG	-	chr6.3:3187287-3187306	MS.gene026940:intron	50.0%
	CTATACTTAGAGGGGAGTCC+AGG	-	chr6.3:3187060-3187079	MS.gene026940:CDS	50.0%
	GCATTACGTAGTGAACTGGG+TGG	-	chr6.3:3188209-3188228	MS.gene026940:intron	50.0%
	GCTGGCTAACAAGGCAGAAT+AGG	-	chr6.3:3188706-3188725	MS.gene026940:intron	50.0%
	TCCACGGCAACAATCAATGG+TGG	+	chr6.3:3187507-3187526	None:intergenic	50.0%
	TGCACGAGTATTCGCATCCA+TGG	+	chr6.3:3188819-3188838	None:intergenic	50.0%
	TGGATGCGAATACTCGTGCA+CGG	-	chr6.3:3188819-3188838	MS.gene026940:CDS	50.0%
	TTCCAGCAATGGCAGACCTA+GGG	-	chr6.3:3188870-3188889	MS.gene026940:intron	50.0%
!	TCCACCATTGATTGTTGCCG+TGG	-	chr6.3:3187503-3187522	MS.gene026940:intron	50.0%
!!	GTCTCTTCTGAGGCGTCAAA+TGG	+	chr6.3:3187115-3187134	None:intergenic	50.0%
	ATGACCACCGAGAATCGCCA+TGG	-	chr6.3:3189226-3189245	MS.gene026940:intron	55.0%
	CGGCTCCCTTCCCTCATTTA+AGG	-	chr6.3:3188481-3188500	MS.gene026940:intron	55.0%
	GGAAAGGCCATGGCGATTCT+CGG	+	chr6.3:3189236-3189255	None:intergenic	55.0%
	GGATGCGAATACTCGTGCAC+GGG	-	chr6.3:3188820-3188839	MS.gene026940:CDS	55.0%
	GTGCACGGGTCTCATCCTAT+GGG	-	chr6.3:3188834-3188853	MS.gene026940:CDS	55.0%
	GTTCCAGCAATGGCAGACCT+AGG	-	chr6.3:3188869-3188888	MS.gene026940:intron	55.0%
	TACTTAGAGGGGAGTCCAGG+AGG	-	chr6.3:3187063-3187082	MS.gene026940:CDS	55.0%
	TCCAGCAATGGCAGACCTAG+GGG	-	chr6.3:3188871-3188890	MS.gene026940:intron	55.0%
	TGAGCCACAGCTGGCTAACA+AGG	-	chr6.3:3188697-3188716	MS.gene026940:intron	55.0%
	TGTTGGACATGAGCCACAGC+TGG	-	chr6.3:3188688-3188707	MS.gene026940:intron	55.0%
!	GATGCTCTTCATGGTGCCGA+CGG	+	chr6.3:3189260-3189279	None:intergenic	55.0%
!	TCTGCCTTGTTAGCCAGCTG+TGG	+	chr6.3:3188704-3188723	None:intergenic	55.0%
	AAGGCCATGGCGATTCTCGG+TGG	+	chr6.3:3189233-3189252	None:intergenic	60.0%
	ACCCCTAGGTCTGCCATTGC+TGG	+	chr6.3:3188875-3188894	None:intergenic	60.0%
	CGGGTCTCATCCTATGGGTC+TGG	-	chr6.3:3188839-3188858	MS.gene026940:CDS	60.0%
	CGTGCACGGGTCTCATCCTA+TGG	-	chr6.3:3188833-3188852	MS.gene026940:CDS	60.0%
	TGATCGTGAGGTTGACCCCG+AGG	-	chr6.3:3189582-3189601	MS.gene026940:CDS	60.0%
!!	TCATGGTGCCGACGGAGGAA+AGG	+	chr6.3:3189252-3189271	None:intergenic	60.0%
	CGCCATGGCCTTTCCTCCGT+CGG	-	chr6.3:3189241-3189260	MS.gene026940:intron	65.0%
	TGCCGACGGAGGAAAGGCCA+TGG	+	chr6.3:3189246-3189265	None:intergenic	65.0%
!!	GCTCTTCATGGTGCCGACGG+AGG	+	chr6.3:3189257-3189276	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	3187038	3189645	3187038	ID=MS.gene026940
chr6.3	mRNA	3187038	3189645	3187038	ID=MS.gene026940.t1;Parent=MS.gene026940
chr6.3	exon	3189504	3189645	3189504	ID=MS.gene026940.t1.exon1;Parent=MS.gene026940.t1
chr6.3	CDS	3189504	3189645	3189504	ID=cds.MS.gene026940.t1;Parent=MS.gene026940.t1
chr6.3	exon	3189375	3189411	3189375	ID=MS.gene026940.t1.exon2;Parent=MS.gene026940.t1
chr6.3	CDS	3189375	3189411	3189375	ID=cds.MS.gene026940.t1;Parent=MS.gene026940.t1
chr6.3	exon	3189256	3189283	3189256	ID=MS.gene026940.t1.exon3;Parent=MS.gene026940.t1
chr6.3	CDS	3189256	3189283	3189256	ID=cds.MS.gene026940.t1;Parent=MS.gene026940.t1
chr6.3	exon	3188729	3188881	3188729	ID=MS.gene026940.t1.exon4;Parent=MS.gene026940.t1
chr6.3	CDS	3188729	3188881	3188729	ID=cds.MS.gene026940.t1;Parent=MS.gene026940.t1
chr6.3	exon	3188551	3188653	3188551	ID=MS.gene026940.t1.exon5;Parent=MS.gene026940.t1
chr6.3	CDS	3188551	3188653	3188551	ID=cds.MS.gene026940.t1;Parent=MS.gene026940.t1
chr6.3	exon	3187038	3187102	3187038	ID=MS.gene026940.t1.exon6;Parent=MS.gene026940.t1
chr6.3	CDS	3187038	3187102	3187038	ID=cds.MS.gene026940.t1;Parent=MS.gene026940.t1

Gene Sequence

>MS.gene026940

ATGCAATTTCCGTATCAGTCGTCTATACTTAGAGGGGAGTCCAGGAGGTTCAACAATAAACAAAGAGCTCGACACCATTTGACGCCTCAGAAGAGACAAGAGATCAAGGAAGCTTTTGAATTATTCGATACTGATGGCTCAGGTATTACAAGTTCACTTTAACATCAAAGTAACAATGTAGTCAATAATATTATTTCCCCTTTATGCTAATACTTTGACTTTGATGATTTTTAGGTACTATTGATGCTAAGGAGCTGAATGTTGCCATGAGGTATTGTTGTTATTCATAAGGTCAAAAATGTTTGTCATGTTAAATATTAATTGGCTATGATATTTTCATAACATGCCTCTTATTTTTGTAGGGCCCTTGGATTTGAAATGACAGAAGAGGTATTATAAACATCCAAGTACATTCATTTATTCGAATTTCATACGATTGAGTAGAGTTTGCAAGTTATAATTATTTCCACCATTGATTGTTGCCGTGGAAAATTATTCCCAGTATTTTGTAACTATTATGACGAACCGAGCCAGTTCTATGTGTGTTAAAATTGAAGCTAAACTTTCCCTACCCATCAGCTTTTGTTCTTTAAACATTTAGCTGTGGTTTTTCTTCTTCTACTGATTCAGAGATAGGGATTCAGTTGCTAATGAATGTAGAATAACAATGGATTATGTACAACATTGTCAGGATTTTGTGATACCATTCTTTGTTAGAGTTCTATATGCATCTCTCTAATACATAATCCACTGTACCATTTCAGCAAATTGAGCAAATGATAGCAGATGTAGACAAGGATGGAAGTGGAGCAATTGACTATGATGAATTTGAGCACATGATGACAGCCAAAATAGGAGAAAGGGACACTAAAGAGGAGCTCATGAAAGCTTTCCATATTATTGATCAAGACAAAAATGTGAAGATCGTCATTCCTATACATCATTAGTTTTGCTTCTTCTTGATTCTCACTGCATATTTGTGGTCATTGCAGGGTAAGATATCTACAACAGACATCAAGCGCATTGCAAAAGAGCTTGGTGAAAATTTCACTGATAGAGAGATTCAAGAGATGGTTGAAGAAGCTGACCAAAATAGTAAGTTACCTCAGTCATATCCTCGGTAGCTCTTTTTTTAGTAAAACCTGTACATCTCACATAGTTTATTTGCATTGCATTACGTAGTGAACTGGGTGGAGATGTTTTTGCTTTAGGTTATGCTCACATAGTTTTGTTTGTATATGAATAATACAGTGTCATTACTTTGAACTTAACACCTGTATTTTTCTGCTTTGAAAGTAAAGCGTGCACTGATCTTGTTTTTAGTTTTCGTGCTTGAAATTGCTTTTTACCATAATTAGTTTTTTGTTAGCAGAGCCATTGTGTAGGAAATAGTGACTTCTTTTGCCTTTGTGCTCTTGTTTATTCGAAATTATATCTTTTTATCGGCTCCCTTCCCTCATTTAAGGATAACAGTTTTGGTCAATATCTTTGGTCTGAAATGAAACCCACTACTGCCAAGGGTATACATATGTGAGCAGTGGAAAACAAAGGTAAATGGAGAAAACTGAGTTAAAGATTAAAGTGAATATTAGGTTTACAACCATATCACCTGGCATTTACACTTTTTTGGGTACAAAACACATGATATGGTGTTGGACATGAGCCACAGCTGGCTAACAAGGCAGAATAGGGTGCTAATTAGTTGGTCACTAGTCAGTAGTCAGTTACTCTGACAATTTGAGAGTTGGTGTTAGTAAGGATGTAGGGTTACCGTTTAACCATGGATGCGAATACTCGTGCACGGGTCTCATCCTATGGGTCTGGTGTCAATGTTCCAGCAATGGCAGACCTAGGGGTATTTTTGAATGATTACAGAGGAGTTTGTTGTGATTGTTTGTACCTGATGTTAGTCAATATGTAAAGGAAGGGTAGGAGTCATATGGGTGGATCATATTTTGAATATACTTGAATAAACTATTTAAGTTGTATATACAGCAGTATTTATTGAAAAAAGAGTAGTTTGTTATTTCAAAACTAAAGTGTTGCATCGGTTTCATAGTTCTTATGGAGAGTTCAACATGTTATACTATACTCTTGTTTGCTAGCAACAGCTACACCCTTAGATCACTCTGTATCTCACACTGTGCATCCCTCCACACTTAAGTTTTACCTAAAACCACCAAATGAAATGACCACCGAGAATCGCCATGGCCTTTCCTCCGTCGGCACCATGAAGAGCATCCACTGTTAGGTTTAGTTGAACTGCAATTTAAAGATTAATGTAGCAGTTAGAAATTACAGTCCATTGTAGACCACCTATAAGACTTTCCACCTTAGTTGCAGTCCATGTTTGTTGTATGATAAATTTTGAAATATAAATGTTAAGTGTGCGATATAAAACTTTACATTCTTTTTAACTGCAGATTTAGTAGCTAATTATGATTTTCTCATATTTTTTGCACTGCCTATGTTTGATTCTTGGTAATTTCTTCCAATGTATGCGAGATATTTTTACGCAACATTTTTGGTTTTACAACATGCAGATGATCGTGAGGTTGACCCCGAGGAATTCGTCATGATGATGAACCGAACAAGCTTCCGTCACTAG

Protein sequence

>MS.gene026940.t1

MQFPYQSSILRGESRRFNNKQRARHHLTPQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMIADVDKDGSGAIDYDEFEHMMTAKIGERDTKEELMKAFHIIDQDKNGKISTTDIKRIAKELGENFTDREIQEMVEEADQNNDREVDPEEFVMMMNRTSFRH