Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03199.t1 | XP_003602047.1 | 100 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 1.00E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03199.t1 | Q9FXM3 | 80.3 | 340 | 66 | 1 | 1 | 340 | 1 | 339 | 9.6e-157 | 554.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03199.t1 | B7FK39 | 100.0 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 7.2e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03199.t1 | MTR_3g088380 | 100.000 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 0.0 | 702 |
| MS.gene03199.t1 | MTR_4g102860 | 39.557 | 316 | 181 | 4 | 10 | 325 | 16 | 321 | 1.24e-69 | 221 |
| MS.gene03199.t1 | MTR_3g088120 | 47.368 | 209 | 104 | 2 | 11 | 219 | 34 | 236 | 1.81e-64 | 206 |
| MS.gene03199.t1 | MTR_3g088120 | 47.368 | 209 | 104 | 2 | 11 | 219 | 34 | 236 | 1.05e-63 | 206 |
| MS.gene03199.t1 | MTR_6g027590 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 1.05e-32 | 125 |
| MS.gene03199.t1 | MTR_6g471010 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 2.03e-32 | 124 |
| MS.gene03199.t1 | MTR_3g118160 | 27.059 | 255 | 147 | 11 | 11 | 234 | 422 | 668 | 1.81e-15 | 77.8 |
| MS.gene03199.t1 | MTR_4g104350 | 23.922 | 255 | 173 | 5 | 1 | 240 | 270 | 518 | 6.26e-14 | 73.2 |
| MS.gene03199.t1 | MTR_4g104350 | 23.922 | 255 | 173 | 5 | 1 | 240 | 270 | 518 | 6.67e-14 | 73.2 |
| MS.gene03199.t1 | MTR_4g102700 | 46.377 | 69 | 37 | 0 | 127 | 195 | 1 | 69 | 7.74e-13 | 65.9 |
| MS.gene03199.t1 | MTR_5g020810 | 23.707 | 232 | 150 | 5 | 9 | 219 | 412 | 637 | 3.64e-11 | 64.7 |
| MS.gene03199.t1 | MTR_4g134530 | 23.810 | 294 | 197 | 5 | 13 | 287 | 429 | 714 | 4.88e-11 | 64.7 |
| MS.gene03199.t1 | MTR_5g098850 | 25.430 | 291 | 173 | 10 | 6 | 269 | 111 | 384 | 6.77e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03199.t1 | AT1G21690 | 79.351 | 339 | 69 | 1 | 1 | 338 | 1 | 339 | 0.0 | 572 |
| MS.gene03199.t1 | AT1G21690 | 77.286 | 339 | 69 | 2 | 1 | 338 | 1 | 332 | 0.0 | 551 |
| MS.gene03199.t1 | AT1G21690 | 76.696 | 339 | 66 | 2 | 1 | 338 | 1 | 327 | 0.0 | 545 |
| MS.gene03199.t1 | AT1G21690 | 77.607 | 326 | 68 | 3 | 1 | 321 | 1 | 326 | 0.0 | 534 |
| MS.gene03199.t1 | AT1G63160 | 39.024 | 328 | 184 | 5 | 9 | 330 | 15 | 332 | 5.90e-68 | 216 |
| MS.gene03199.t1 | AT1G77470 | 46.479 | 213 | 101 | 3 | 10 | 219 | 40 | 242 | 3.36e-63 | 205 |
| MS.gene03199.t1 | AT5G27740 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 3.77e-32 | 123 |
| MS.gene03199.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 3.82e-15 | 77.0 |
| MS.gene03199.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 3.82e-15 | 77.0 |
| MS.gene03199.t1 | AT5G45720 | 24.653 | 288 | 204 | 5 | 9 | 287 | 343 | 626 | 4.43e-15 | 77.0 |
| MS.gene03199.t1 | AT5G45720 | 24.653 | 288 | 204 | 5 | 9 | 287 | 343 | 626 | 4.57e-15 | 77.0 |
| MS.gene03199.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene03199.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene03199.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene03199.t1 | AT5G22010 | 25.600 | 250 | 140 | 8 | 4 | 218 | 335 | 573 | 8.46e-15 | 76.3 |
| MS.gene03199.t1 | AT5G22010 | 25.600 | 250 | 140 | 8 | 4 | 218 | 335 | 573 | 8.89e-15 | 75.9 |
| MS.gene03199.t1 | AT2G02480 | 25.984 | 254 | 160 | 7 | 6 | 240 | 446 | 690 | 1.58e-13 | 72.4 |
| MS.gene03199.t1 | AT2G02480 | 25.984 | 254 | 160 | 7 | 6 | 240 | 446 | 690 | 1.58e-13 | 72.4 |
| MS.gene03199.t1 | AT1G14460 | 25.329 | 304 | 194 | 8 | 6 | 287 | 419 | 711 | 2.68e-13 | 71.6 |
| MS.gene03199.t1 | AT1G24290 | 24.444 | 270 | 176 | 8 | 9 | 269 | 101 | 351 | 4.47e-11 | 64.3 |
Find 81 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATACTTCTTAGGCTTAT+TGG | 0.122606 | 3.3:+73816333 | None:intergenic |
| CAGTCTGCGGCTCGCTTATT+TGG | 0.138170 | 3.3:-73814194 | MS.gene03199:CDS |
| CTTCAAGGTGTGCAAAATTC+AGG | 0.235497 | 3.3:-73815551 | MS.gene03199:CDS |
| TCACAATTCACATACTTCTT+AGG | 0.237994 | 3.3:+73816325 | None:intergenic |
| AAGGATCTCATTTCTGTGTC+TGG | 0.246438 | 3.3:-73814155 | MS.gene03199:CDS |
| ACTCTATAAATCTAGGGTTT+TGG | 0.294690 | 3.3:-73816434 | MS.gene03199:CDS |
| CTTTGCAGATGTATACTATT+CGG | 0.322240 | 3.3:+73815496 | None:intergenic |
| GTACTCGAACTACTTCTTCT+TGG | 0.343225 | 3.3:+73816647 | None:intergenic |
| TCCAGAACAATTATCTTATA+CGG | 0.355355 | 3.3:+73816199 | None:intergenic |
| AATGAGATCCTTGGAAGAAA+TGG | 0.355643 | 3.3:+73814166 | None:intergenic |
| GAATGAATTACTTACGCTTC+CGG | 0.359559 | 3.3:+73816606 | None:intergenic |
| ACCCTAGATTTATAGAGTTC+AGG | 0.360409 | 3.3:+73816439 | None:intergenic |
| CCCTCGTAAGCAAATCCTTC+TGG | 0.371183 | 3.3:+73812681 | None:intergenic |
| GACCTGAACTCTATAAATCT+AGG | 0.373744 | 3.3:-73816441 | MS.gene03199:CDS |
| TACTTACGCTTCCGGTTTCG+AGG | 0.379428 | 3.3:+73816614 | None:intergenic |
| GCTACGTCTTTCACTTGCTT+TGG | 0.383156 | 3.3:+73816673 | None:intergenic |
| TCGGGCTATAACATACTTGC+AGG | 0.386432 | 3.3:-73815289 | MS.gene03199:intron |
| TTCTATGGTCCTCCCGGCAC+TGG | 0.398862 | 3.3:-73816505 | MS.gene03199:CDS |
| TGCCCACACATGCTCTTCTA+TGG | 0.405641 | 3.3:-73816520 | MS.gene03199:CDS |
| ACCGTATAAGATAATTGTTC+TGG | 0.408822 | 3.3:-73816200 | MS.gene03199:CDS |
| AGGATCTCATTTCTGTGTCT+GGG | 0.425817 | 3.3:-73814154 | MS.gene03199:CDS |
| TTATATGCAACTACATTAGC+AGG | 0.448705 | 3.3:-73816006 | MS.gene03199:intron |
| ATCGCGGTATTAACGTTGTT+CGG | 0.450811 | 3.3:-73816393 | MS.gene03199:CDS |
| CTCACCAACACCCTCGAAAC+CGG | 0.458137 | 3.3:-73816625 | MS.gene03199:CDS |
| TTATAGAACCACTTGCTTCA+AGG | 0.458269 | 3.3:-73815566 | MS.gene03199:CDS |
| CGTCTTTCACTTGCTTTGGA+CGG | 0.461616 | 3.3:+73816677 | None:intergenic |
| CTCATGATTTCTTCTGTCAG+TGG | 0.463158 | 3.3:+73815522 | None:intergenic |
| GGCAAGAATATCCAAGAAGC+TGG | 0.470657 | 3.3:-73813363 | MS.gene03199:CDS |
| GGTTGAGTGCTCTGAATGAT+TGG | 0.473772 | 3.3:+73816812 | None:intergenic |
| AAACTTACTCTAAAGTTACT+AGG | 0.480746 | 3.3:-73816036 | MS.gene03199:CDS |
| AGACACAGAAATGAGATCCT+TGG | 0.484818 | 3.3:+73814157 | None:intergenic |
| TGGATCTTCCATTTCTTCCA+AGG | 0.489878 | 3.3:-73814174 | MS.gene03199:CDS |
| TGAGTTAGCATCTGAGAGAC+TGG | 0.506538 | 3.3:+73813530 | None:intergenic |
| GATTTCGCTGCTGTCGCTGT+CGG | 0.516035 | 3.3:-73816358 | MS.gene03199:CDS |
| TTCTCAAGGAGATCTTCGTC+GGG | 0.532165 | 3.3:-73815307 | MS.gene03199:CDS |
| GTCAACAATTTCATTGCAGA+GGG | 0.534353 | 3.3:-73813557 | MS.gene03199:CDS |
| GAATTGCAGTGCCTAGTTGA+TGG | 0.534378 | 3.3:-73812768 | MS.gene03199:intron |
| GTATACATCTGCAAAGAAGA+AGG | 0.535887 | 3.3:-73815489 | MS.gene03199:CDS |
| TAAGATAATTGTTCTGGATG+AGG | 0.538029 | 3.3:-73816194 | MS.gene03199:CDS |
| GGTTACTATTTCTCGACCCA+TGG | 0.542200 | 3.3:+73816791 | None:intergenic |
| TTTCTCAAGGAGATCTTCGT+CGG | 0.544188 | 3.3:-73815308 | MS.gene03199:CDS |
| ACCTGAACTCTATAAATCTA+GGG | 0.544731 | 3.3:-73816440 | MS.gene03199:CDS |
| ACTTTAAGTAATATTTCTCA+AGG | 0.547470 | 3.3:-73815321 | MS.gene03199:CDS |
| GCAAGAATATCCAAGAAGCT+GGG | 0.552008 | 3.3:-73813362 | MS.gene03199:CDS |
| ACTTACGCTTCCGGTTTCGA+GGG | 0.555639 | 3.3:+73816615 | None:intergenic |
| AGTGCCTCAACAACCTCCGC+TGG | 0.556568 | 3.3:+73813626 | None:intergenic |
| TGTTCCAGCGGAGGTTGTTG+AGG | 0.557324 | 3.3:-73813630 | MS.gene03199:CDS |
| CTTCTTAAAGCATGCAGAAG+TGG | 0.558722 | 3.3:-73813605 | MS.gene03199:CDS |
| TTCAATGACAGAAGATGCCC+AGG | 0.563950 | 3.3:-73816167 | MS.gene03199:intron |
| GGACCATAGAAGAGCATGTG+TGG | 0.572859 | 3.3:+73816517 | None:intergenic |
| GCTTCCGGTTTCGAGGGTGT+TGG | 0.575401 | 3.3:+73816621 | None:intergenic |
| ATTCATCAGCACCATCAACT+AGG | 0.577021 | 3.3:+73812757 | None:intergenic |
| AGCGATAGCAAGGGCAGTAG+TGG | 0.578530 | 3.3:+73816477 | None:intergenic |
| CGACATATCAGATGAGCAGA+AGG | 0.579308 | 3.3:-73813384 | MS.gene03199:CDS |
| AAAGCTGATGAGCGATAGCA+AGG | 0.581455 | 3.3:+73816467 | None:intergenic |
| TTTGCACACCTTGAAGCAAG+TGG | 0.582075 | 3.3:+73815558 | None:intergenic |
| CATTCAGAGCACTCAACCAT+GGG | 0.590157 | 3.3:-73816807 | MS.gene03199:CDS |
| AGTCAACAATTTCATTGCAG+AGG | 0.595219 | 3.3:-73813558 | MS.gene03199:CDS |
| AGGTTCCTACCTCAGCATCA+AGG | 0.596936 | 3.3:+73815460 | None:intergenic |
| CCAGAAGGATTTGCTTACGA+GGG | 0.598134 | 3.3:-73812681 | MS.gene03199:CDS |
| AAACCAGATTGTTCCAGCGG+AGG | 0.598887 | 3.3:-73813639 | MS.gene03199:intron |
| ATGCTCTTCTATGGTCCTCC+CGG | 0.603856 | 3.3:-73816511 | MS.gene03199:CDS |
| TCATTCAGAGCACTCAACCA+TGG | 0.605871 | 3.3:-73816808 | MS.gene03199:CDS |
| CAAGAATATCCAAGAAGCTG+GGG | 0.606115 | 3.3:-73813361 | MS.gene03199:CDS |
| ATTATCTTATACGGTGGACA+CGG | 0.615926 | 3.3:+73816208 | None:intergenic |
| GGATCTCATTTCTGTGTCTG+GGG | 0.616871 | 3.3:-73814153 | MS.gene03199:intron |
| GAATGCACTGAGGCGGACGA+TGG | 0.617475 | 3.3:-73816059 | MS.gene03199:CDS |
| GCTTTATGTAACATGCCAGA+AGG | 0.617481 | 3.3:-73812696 | MS.gene03199:CDS |
| AGGAATCTACCTTGATGCTG+AGG | 0.617847 | 3.3:-73815469 | MS.gene03199:intron |
| AGAACAATTATCTTATACGG+TGG | 0.619264 | 3.3:+73816202 | None:intergenic |
| AGTCTCTCAGATGCTAACTC+AGG | 0.621124 | 3.3:-73813528 | MS.gene03199:intron |
| GCCAGAAGGATTTGCTTACG+AGG | 0.622388 | 3.3:-73812682 | MS.gene03199:CDS |
| TTGAAACCAGATTGTTCCAG+CGG | 0.632187 | 3.3:-73813642 | MS.gene03199:intron |
| ATACTTGCAGCTTCTTGATG+TGG | 0.635384 | 3.3:-73812736 | MS.gene03199:CDS |
| GACCATAGAAGAGCATGTGT+GGG | 0.648975 | 3.3:+73816518 | None:intergenic |
| GGTTACAGAATGCACTGAGG+CGG | 0.651808 | 3.3:-73816066 | MS.gene03199:intron |
| AAGCTGATGAGCGATAGCAA+GGG | 0.679568 | 3.3:+73816468 | None:intergenic |
| AAGAATATCCAAGAAGCTGG+GGG | 0.689443 | 3.3:-73813360 | MS.gene03199:CDS |
| CTCAATGCTAGTGATGATCG+CGG | 0.691868 | 3.3:-73816409 | MS.gene03199:CDS |
| TCAACAATTTCATTGCAGAG+GGG | 0.739196 | 3.3:-73813556 | MS.gene03199:CDS |
| TTTGGTTACAGAATGCACTG+AGG | 0.779186 | 3.3:-73816069 | MS.gene03199:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTTAAAATATATAAA+AGG | - | chr3.3:73816299-73816318 | MS.gene03199:intron | 0.0% |
| !! | AACTTAATTTATTAAAACAA+TGG | + | chr3.3:73813693-73813712 | None:intergenic | 10.0% |
| !!! | ATTTAGTATTTTAAAAAATC+AGG | + | chr3.3:73815588-73815607 | None:intergenic | 10.0% |
| !!! | ATTTTAATGATAATATTACA+CGG | - | chr3.3:73814310-73814329 | MS.gene03199:intron | 10.0% |
| !!! | TTTTTAAAATACTAAATACA+TGG | - | chr3.3:73815591-73815610 | MS.gene03199:intron | 10.0% |
| !! | AAACTAAATTTCAACATAAA+TGG | - | chr3.3:73816545-73816564 | MS.gene03199:intron | 15.0% |
| !! | AAAGAAAAAAAATCAGTAAA+TGG | + | chr3.3:73813534-73813553 | None:intergenic | 15.0% |
| !! | TACACAAATCTTATAAAAAA+GGG | + | chr3.3:73813231-73813250 | None:intergenic | 15.0% |
| !! | TTACACAAATCTTATAAAAA+AGG | + | chr3.3:73813232-73813251 | None:intergenic | 15.0% |
| !!! | AATAAAACTCAAAAGTATAT+TGG | + | chr3.3:73813199-73813218 | None:intergenic | 15.0% |
| !!! | AGGAATAGTTTTTATTATAT+TGG | - | chr3.3:73816614-73816633 | MS.gene03199:intron | 15.0% |
| !!! | GGAATAGTTTTTATTATATT+GGG | - | chr3.3:73816615-73816634 | MS.gene03199:intron | 15.0% |
| !!! | TCTTTTATAATATTTTCGAA+AGG | + | chr3.3:73814982-73815001 | None:intergenic | 15.0% |
| !! | AAATAAATTCAATTGCAAGA+TGG | - | chr3.3:73814775-73814794 | MS.gene03199:intron | 20.0% |
| !! | AAATATCATGATCAATACAA+AGG | - | chr3.3:73813788-73813807 | MS.gene03199:intron | 20.0% |
| !! | AATCTTATAAAAAAGGGAAA+AGG | + | chr3.3:73813225-73813244 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAATTGGAA+TGG | + | chr3.3:73812739-73812758 | None:intergenic | 20.0% |
| !! | ACAAATTAGTTGTTAATGTA+AGG | + | chr3.3:73815040-73815059 | None:intergenic | 20.0% |
| !! | ACAATCTTAGTGATAATAAA+GGG | - | chr3.3:73815128-73815147 | MS.gene03199:intron | 20.0% |
| !! | ACAGAAAAAGATGATTATTA+AGG | + | chr3.3:73814904-73814923 | None:intergenic | 20.0% |
| !! | ACTTTAAGTAATATTTCTCA+AGG | - | chr3.3:73814174-73814193 | MS.gene03199:CDS | 20.0% |
| !! | ATACATTATTCAAAGTGAAA+TGG | + | chr3.3:73814389-73814408 | None:intergenic | 20.0% |
| !! | ATTGGAATTGAAATTGAAAT+TGG | + | chr3.3:73812744-73812763 | None:intergenic | 20.0% |
| !! | CATTTGTAATTTCTCTAAAT+AGG | + | chr3.3:73816435-73816454 | None:intergenic | 20.0% |
| !! | CTATTTAGAGAAATTACAAA+TGG | - | chr3.3:73816433-73816452 | MS.gene03199:CDS | 20.0% |
| !! | GCTACAAAAAAAAAAAAATC+CGG | - | chr3.3:73814573-73814592 | MS.gene03199:intron | 20.0% |
| !! | TATCACTTTATTAATTGAAC+AGG | + | chr3.3:73813386-73813405 | None:intergenic | 20.0% |
| !! | TATGTGCAACTTAAAATATT+TGG | + | chr3.3:73816281-73816300 | None:intergenic | 20.0% |
| !! | TGTACTTCAGTTTAATATAT+AGG | - | chr3.3:73816475-73816494 | MS.gene03199:CDS | 20.0% |
| !!! | ATTTGTGTAACTTATGTTTT+GGG | - | chr3.3:73813242-73813261 | MS.gene03199:intron | 20.0% |
| !!! | TAATTTTGATTTAGCAAACA+AGG | - | chr3.3:73815913-73815932 | MS.gene03199:intron | 20.0% |
| !!! | TACATTAACAACTAATTTGT+TGG | - | chr3.3:73815040-73815059 | MS.gene03199:intron | 20.0% |
| !!! | TTATAATATTTTCGAAAGGA+AGG | + | chr3.3:73814978-73814997 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTCACATTCTTA+AGG | - | chr3.3:73813558-73813577 | MS.gene03199:CDS | 20.0% |
| ! | AAATCAGAGAAACAGAAAAT+TGG | + | chr3.3:73812762-73812781 | None:intergenic | 25.0% |
| ! | AGACTGAAAATGTTAATACT+GGG | + | chr3.3:73815287-73815306 | None:intergenic | 25.0% |
| ! | AGTTCATATGTGCTATAAAT+GGG | - | chr3.3:73814697-73814716 | MS.gene03199:intron | 25.0% |
| ! | ATAATTATTAGCTGTATGGA+AGG | - | chr3.3:73815517-73815536 | MS.gene03199:CDS | 25.0% |
| ! | CTTTGATATAAAAACAGAAC+AGG | + | chr3.3:73815393-73815412 | None:intergenic | 25.0% |
| ! | GAATTGTAACCAACTTAATT+AGG | + | chr3.3:73816691-73816710 | None:intergenic | 25.0% |
| ! | GACAATCTTAGTGATAATAA+AGG | - | chr3.3:73815127-73815146 | MS.gene03199:intron | 25.0% |
| ! | GTCTTGATTTAATTATGTAG+TGG | + | chr3.3:73815110-73815129 | None:intergenic | 25.0% |
| ! | GTGAGTATATTAATTCCTAA+AGG | + | chr3.3:73816184-73816203 | None:intergenic | 25.0% |
| ! | TCCAGAACAATTATCTTATA+CGG | + | chr3.3:73813299-73813318 | None:intergenic | 25.0% |
| ! | TCTTAAACATATCAAAGCAT+TGG | + | chr3.3:73813643-73813662 | None:intergenic | 25.0% |
| ! | TGACATAATTATTAGCTGTA+TGG | - | chr3.3:73815513-73815532 | MS.gene03199:CDS | 25.0% |
| ! | TTAGTATATTTGCATCTGTA+GGG | - | chr3.3:73814144-73814163 | MS.gene03199:intron | 25.0% |
| ! | TTTAGTATATTTGCATCTGT+AGG | - | chr3.3:73814143-73814162 | MS.gene03199:intron | 25.0% |
| !! | GATTTGTGTAACTTATGTTT+TGG | - | chr3.3:73813241-73813260 | MS.gene03199:intron | 25.0% |
| !!! | AAACTTACTCTAAAGTTACT+AGG | - | chr3.3:73813459-73813478 | MS.gene03199:intron | 25.0% |
| !!! | AAGCAACACACTTTTTTAAT+AGG | + | chr3.3:73814288-73814307 | None:intergenic | 25.0% |
| !!! | TTTATGTCCATTTTTCTGTA+TGG | - | chr3.3:73815440-73815459 | MS.gene03199:intron | 25.0% |
| !!! | TTTCAAGATTTTAGAAAGTC+AGG | + | chr3.3:73815839-73815858 | None:intergenic | 25.0% |
| AAAAACAGAGAAAACATACC+TGG | + | chr3.3:73813349-73813368 | None:intergenic | 30.0% | |
| AAAACAGAGAAAACATACCT+GGG | + | chr3.3:73813348-73813367 | None:intergenic | 30.0% | |
| AAATTGGAATGGAGATAAAG+TGG | + | chr3.3:73812728-73812747 | None:intergenic | 30.0% | |
| AACAATACCTCTACAAACAA+TGG | + | chr3.3:73814103-73814122 | None:intergenic | 30.0% | |
| AACATAAATGGCCCTATATA+TGG | - | chr3.3:73816557-73816576 | MS.gene03199:intron | 30.0% | |
| AAGGTTACTTATGATCCTTT+AGG | - | chr3.3:73816166-73816185 | MS.gene03199:intron | 30.0% | |
| AATGAAAACCATGTACATCA+AGG | + | chr3.3:73813605-73813624 | None:intergenic | 30.0% | |
| AATTAAACGATTGTCAACAC+CGG | + | chr3.3:73814595-73814614 | None:intergenic | 30.0% | |
| ACATAAATGGCCCTATATAT+GGG | - | chr3.3:73816558-73816577 | MS.gene03199:intron | 30.0% | |
| ACATTGTAAAAGCCTTAGTT+TGG | + | chr3.3:73816044-73816063 | None:intergenic | 30.0% | |
| ACCGTATAAGATAATTGTTC+TGG | - | chr3.3:73813295-73813314 | MS.gene03199:intron | 30.0% | |
| ACCTGAACTCTATAAATCTA+GGG | - | chr3.3:73813055-73813074 | MS.gene03199:intron | 30.0% | |
| AGAACAATTATCTTATACGG+TGG | + | chr3.3:73813296-73813315 | None:intergenic | 30.0% | |
| AGAGTTCGTACATACATATT+GGG | - | chr3.3:73814806-73814825 | MS.gene03199:intron | 30.0% | |
| AGCAAGAATAGATAACACAT+AGG | + | chr3.3:73815732-73815751 | None:intergenic | 30.0% | |
| AGGTAAAAGCAAAATCTACA+TGG | + | chr3.3:73815020-73815039 | None:intergenic | 30.0% | |
| ATTGAGAATAGGGAATACAT+TGG | - | chr3.3:73813875-73813894 | MS.gene03199:intron | 30.0% | |
| CAGACTGAAAATGTTAATAC+TGG | + | chr3.3:73815288-73815307 | None:intergenic | 30.0% | |
| CGAAGACAAAAAAAGAATGA+GGG | + | chr3.3:73814630-73814649 | None:intergenic | 30.0% | |
| CTACAGAGATAAACAAAAGA+AGG | + | chr3.3:73816644-73816663 | None:intergenic | 30.0% | |
| CTTTGCAGATGTATACTATT+CGG | + | chr3.3:73814002-73814021 | None:intergenic | 30.0% | |
| GAAGACATACTATGTTGATA+AGG | + | chr3.3:73814243-73814262 | None:intergenic | 30.0% | |
| GAGTTCATATGTGCTATAAA+TGG | - | chr3.3:73814696-73814715 | MS.gene03199:intron | 30.0% | |
| GATTATAAGTGACTAATGTC+TGG | - | chr3.3:73816518-73816537 | MS.gene03199:CDS | 30.0% | |
| GGTTCAATAATTAAAGCCAA+TGG | - | chr3.3:73814656-73814675 | MS.gene03199:intron | 30.0% | |
| GTAGAATAGATCTGTAATAC+AGG | - | chr3.3:73814933-73814952 | MS.gene03199:intron | 30.0% | |
| TAAGAAGAAAAGAGGGTTTA+GGG | + | chr3.3:73812927-73812946 | None:intergenic | 30.0% | |
| TAGTATATTTGCATCTGTAG+GGG | - | chr3.3:73814145-73814164 | MS.gene03199:intron | 30.0% | |
| TCACAATTCACATACTTCTT+AGG | + | chr3.3:73813173-73813192 | None:intergenic | 30.0% | |
| TCAGCACTTTATTGAGAATA+GGG | - | chr3.3:73813865-73813884 | MS.gene03199:intron | 30.0% | |
| TCGAAGACAAAAAAAGAATG+AGG | + | chr3.3:73814631-73814650 | None:intergenic | 30.0% | |
| TTAAGAAGAAAAGAGGGTTT+AGG | + | chr3.3:73812928-73812947 | None:intergenic | 30.0% | |
| TTATATGCAACTACATTAGC+AGG | - | chr3.3:73813489-73813508 | MS.gene03199:intron | 30.0% | |
| ! | CATCTTTTTCTGTTAACACT+TGG | - | chr3.3:73814911-73814930 | MS.gene03199:intron | 30.0% |
| ! | GTATTAACATTTTCAGTCTG+CGG | - | chr3.3:73815288-73815307 | MS.gene03199:intron | 30.0% |
| ! | TAAGATAATTGTTCTGGATG+AGG | - | chr3.3:73813301-73813320 | MS.gene03199:intron | 30.0% |
| ! | TTTTGATCCATTGTTTGTAG+AGG | - | chr3.3:73814093-73814112 | MS.gene03199:intron | 30.0% |
| !! | AACTAATTTGTTGGCATAAG+TGG | - | chr3.3:73815049-73815068 | MS.gene03199:intron | 30.0% |
| !! | AATGGGTTAAGAAGAAAAGA+GGG | + | chr3.3:73812934-73812953 | None:intergenic | 30.0% |
| !! | ACTCTATAAATCTAGGGTTT+TGG | - | chr3.3:73813061-73813080 | MS.gene03199:intron | 30.0% |
| !! | CTTCTTTTGTTTATCTCTGT+AGG | - | chr3.3:73816642-73816661 | MS.gene03199:CDS | 30.0% |
| !! | TGTTGATAATGCTACATGTT+AGG | - | chr3.3:73814522-73814541 | MS.gene03199:intron | 30.0% |
| !!! | CAAGATTGTCGTTTTTTTGT+AGG | - | chr3.3:73813905-73813924 | MS.gene03199:intron | 30.0% |
| !!! | TAGCTGATTTTTAGTGCATT+CGG | - | chr3.3:73815774-73815793 | MS.gene03199:intron | 30.0% |
| AAAGAAGTTCCAGATGAAAC+TGG | + | chr3.3:73816003-73816022 | None:intergenic | 35.0% | |
| AAATGGGAGAGTTCAATTGT+AGG | - | chr3.3:73814713-73814732 | MS.gene03199:intron | 35.0% | |
| AATCAGTACAAACTTCGTGA+AGG | + | chr3.3:73815182-73815201 | None:intergenic | 35.0% | |
| AATGAGATCCTTGGAAGAAA+TGG | + | chr3.3:73815332-73815351 | None:intergenic | 35.0% | |
| ACCCTAGATTTATAGAGTTC+AGG | + | chr3.3:73813059-73813078 | None:intergenic | 35.0% | |
| AGAAATTACAAATGGCACTC+AGG | - | chr3.3:73816441-73816460 | MS.gene03199:CDS | 35.0% | |
| AGATGCAATACTCAAAAGCT+TGG | + | chr3.3:73815231-73815250 | None:intergenic | 35.0% | |
| AGTCAACAATTTCATTGCAG+AGG | - | chr3.3:73815937-73815956 | MS.gene03199:intron | 35.0% | |
| ATTATCTTATACGGTGGACA+CGG | + | chr3.3:73813290-73813309 | None:intergenic | 35.0% | |
| CACATACTTCTTAGGCTTAT+TGG | + | chr3.3:73813165-73813184 | None:intergenic | 35.0% | |
| CAGCTAAATGTGCAAGAATA+TGG | + | chr3.3:73815760-73815779 | None:intergenic | 35.0% | |
| CATAACTAGCAATATTCTCG+TGG | - | chr3.3:73816249-73816268 | MS.gene03199:intron | 35.0% | |
| CTTATGCTTAAAATGGGAGT+TGG | - | chr3.3:73814841-73814860 | MS.gene03199:intron | 35.0% | |
| GAATGAATTACTTACGCTTC+CGG | + | chr3.3:73812892-73812911 | None:intergenic | 35.0% | |
| GACCTGAACTCTATAAATCT+AGG | - | chr3.3:73813054-73813073 | MS.gene03199:intron | 35.0% | |
| GAGAGTTCGTACATACATAT+TGG | - | chr3.3:73814805-73814824 | MS.gene03199:intron | 35.0% | |
| GCAAACACCATACAGAAAAA+TGG | + | chr3.3:73815450-73815469 | None:intergenic | 35.0% | |
| GGGTTGCTTATGCTTAAAAT+GGG | - | chr3.3:73814835-73814854 | MS.gene03199:intron | 35.0% | |
| GTATACATCTGCAAAGAAGA+AGG | - | chr3.3:73814006-73814025 | MS.gene03199:intron | 35.0% | |
| GTCAACAATTTCATTGCAGA+GGG | - | chr3.3:73815938-73815957 | MS.gene03199:intron | 35.0% | |
| GTCAGCACTTTATTGAGAAT+AGG | - | chr3.3:73813864-73813883 | MS.gene03199:intron | 35.0% | |
| TAATCGTGCTTACCAAACTA+AGG | - | chr3.3:73816029-73816048 | MS.gene03199:CDS | 35.0% | |
| TAGGAACCTTAGAGCTTATA+TGG | - | chr3.3:73814049-73814068 | MS.gene03199:intron | 35.0% | |
| TCAACAATTTCATTGCAGAG+GGG | - | chr3.3:73815939-73815958 | MS.gene03199:intron | 35.0% | |
| TCAATTGCAAGATGGTGAAT+TGG | - | chr3.3:73814783-73814802 | MS.gene03199:intron | 35.0% | |
| TGTGAAACTAACTACCACTA+GGG | - | chr3.3:73814487-73814506 | MS.gene03199:intron | 35.0% | |
| TTAATTGAACAGGCAAAGCT+AGG | + | chr3.3:73813376-73813395 | None:intergenic | 35.0% | |
| TTATAGAACCACTTGCTTCA+AGG | - | chr3.3:73813929-73813948 | MS.gene03199:intron | 35.0% | |
| TTCGGTTTCACCCATATATA+GGG | + | chr3.3:73816571-73816590 | None:intergenic | 35.0% | |
| TTGAAAGCGACAAGTGATTT+CGG | + | chr3.3:73816589-73816608 | None:intergenic | 35.0% | |
| TTGGGTTTCTGATATTTCAG+TGG | - | chr3.3:73813260-73813279 | MS.gene03199:intron | 35.0% | |
| TTGTGAAACTAACTACCACT+AGG | - | chr3.3:73814486-73814505 | MS.gene03199:intron | 35.0% | |
| TTTAGAAAGTCAGGAAAAGC+AGG | + | chr3.3:73815830-73815849 | None:intergenic | 35.0% | |
| TTTAGTCACCTTGATGTACA+TGG | - | chr3.3:73813594-73813613 | MS.gene03199:CDS | 35.0% | |
| TTTCGGTTTCACCCATATAT+AGG | + | chr3.3:73816572-73816591 | None:intergenic | 35.0% | |
| ! | AGGTATTGTTGACATCATAG+CGG | - | chr3.3:73814113-73814132 | MS.gene03199:intron | 35.0% |
| ! | CAATTCTTACTTGTTGCTTG+TGG | - | chr3.3:73816705-73816724 | MS.gene03199:intron | 35.0% |
| ! | GATAACACATAGGAAGCATA+AGG | + | chr3.3:73815722-73815741 | None:intergenic | 35.0% |
| ! | TACATACATATTGGGCTAGA+GGG | - | chr3.3:73814814-73814833 | MS.gene03199:intron | 35.0% |
| ! | TCTTTTCCTTCAGTTGTTTG+AGG | - | chr3.3:73816072-73816091 | MS.gene03199:intron | 35.0% |
| !! | AAAGTGCTGACAAGAACAAT+AGG | + | chr3.3:73813855-73813874 | None:intergenic | 35.0% |
| !! | GAATGGGTTAAGAAGAAAAG+AGG | + | chr3.3:73812935-73812954 | None:intergenic | 35.0% |
| !!! | CTTTTTTTGTCTTCGAATGC+TGG | - | chr3.3:73814635-73814654 | MS.gene03199:intron | 35.0% |
| AAAGTCAGGAAAAGCAGGAA+GGG | + | chr3.3:73815825-73815844 | None:intergenic | 40.0% | |
| AAGAATATCCAAGAAGCTGG+GGG | - | chr3.3:73816135-73816154 | MS.gene03199:intron | 40.0% | |
| AAGGATCTCATTTCTGTGTC+TGG | - | chr3.3:73815340-73815359 | MS.gene03199:intron | 40.0% | |
| ACATCCAACGTTTCCTGAAA+TGG | + | chr3.3:73815690-73815709 | None:intergenic | 40.0% | |
| AGACACAGAAATGAGATCCT+TGG | + | chr3.3:73815341-73815360 | None:intergenic | 40.0% | |
| AGGATCTCATTTCTGTGTCT+GGG | - | chr3.3:73815341-73815360 | MS.gene03199:intron | 40.0% | |
| ATAAAAACAGAACAGGCGAC+AGG | + | chr3.3:73815386-73815405 | None:intergenic | 40.0% | |
| ATACTTGCAGCTTCTTGATG+TGG | - | chr3.3:73816759-73816778 | MS.gene03199:intron | 40.0% | |
| ATCGCGGTATTAACGTTGTT+CGG | - | chr3.3:73813102-73813121 | MS.gene03199:intron | 40.0% | |
| ATTACATGCCACCTGCAATT+TGG | - | chr3.3:73813408-73813427 | MS.gene03199:CDS | 40.0% | |
| ATTCATCAGCACCATCAACT+AGG | + | chr3.3:73816741-73816760 | None:intergenic | 40.0% | |
| CAAAATTGCTAGTTCCCTAG+TGG | + | chr3.3:73814504-73814523 | None:intergenic | 40.0% | |
| CAAGAATATCCAAGAAGCTG+GGG | - | chr3.3:73816134-73816153 | MS.gene03199:intron | 40.0% | |
| CAATAGCCTCAAACAACTGA+AGG | + | chr3.3:73816081-73816100 | None:intergenic | 40.0% | |
| CCAATAACGATAAGCCAAAC+AGG | + | chr3.3:73815552-73815571 | None:intergenic | 40.0% | |
| CTCATGATTTCTTCTGTCAG+TGG | + | chr3.3:73813976-73813995 | None:intergenic | 40.0% | |
| CTTCAAGGTGTGCAAAATTC+AGG | - | chr3.3:73813944-73813963 | MS.gene03199:intron | 40.0% | |
| CTTCTTAAAGCATGCAGAAG+TGG | - | chr3.3:73815890-73815909 | MS.gene03199:intron | 40.0% | |
| GAACCTTAGAGCTTATATGG+CGG | - | chr3.3:73814052-73814071 | MS.gene03199:intron | 40.0% | |
| GAGACGAAATTGAAGCGAAT+GGG | + | chr3.3:73812951-73812970 | None:intergenic | 40.0% | |
| GCAAGAATATCCAAGAAGCT+GGG | - | chr3.3:73816133-73816152 | MS.gene03199:intron | 40.0% | |
| GCATTCTGTAACCAAATTGC+AGG | + | chr3.3:73813422-73813441 | None:intergenic | 40.0% | |
| GCTTTATGTAACATGCCAGA+AGG | - | chr3.3:73816799-73816818 | MS.gene03199:CDS | 40.0% | |
| GGGGTTGCTTATGCTTAAAA+TGG | - | chr3.3:73814834-73814853 | MS.gene03199:intron | 40.0% | |
| GGTTCACACTCAGCTTATAT+GGG | - | chr3.3:73814862-73814881 | MS.gene03199:intron | 40.0% | |
| GTACTCGAACTACTTCTTCT+TGG | + | chr3.3:73812851-73812870 | None:intergenic | 40.0% | |
| GTCTGCAAGCCTAATTAAGT+TGG | - | chr3.3:73816679-73816698 | MS.gene03199:CDS | 40.0% | |
| TGAGACGAAATTGAAGCGAA+TGG | + | chr3.3:73812952-73812971 | None:intergenic | 40.0% | |
| TGGATCTTCCATTTCTTCCA+AGG | - | chr3.3:73815321-73815340 | MS.gene03199:CDS | 40.0% | |
| TGGTTCACACTCAGCTTATA+TGG | - | chr3.3:73814861-73814880 | MS.gene03199:intron | 40.0% | |
| TTCTGTAACCAAATTGCAGG+TGG | + | chr3.3:73813419-73813438 | None:intergenic | 40.0% | |
| TTGAAACCAGATTGTTCCAG+CGG | - | chr3.3:73815853-73815872 | MS.gene03199:intron | 40.0% | |
| TTGGACGGCTGAAACAAATT+GGG | + | chr3.3:73812806-73812825 | None:intergenic | 40.0% | |
| TTTCTCAAGGAGATCTTCGT+CGG | - | chr3.3:73814187-73814206 | MS.gene03199:CDS | 40.0% | |
| TTTGGACGGCTGAAACAAAT+TGG | + | chr3.3:73812807-73812826 | None:intergenic | 40.0% | |
| TTTGGTTACAGAATGCACTG+AGG | - | chr3.3:73813426-73813445 | MS.gene03199:intron | 40.0% | |
| ! | AAAAAAGAATGAGGGCATGC+TGG | + | chr3.3:73814622-73814641 | None:intergenic | 40.0% |
| ! | ACATACATATTGGGCTAGAG+GGG | - | chr3.3:73814815-73814834 | MS.gene03199:intron | 40.0% |
| ! | CCTGTTTGGCTTATCGTTAT+TGG | - | chr3.3:73815549-73815568 | MS.gene03199:CDS | 40.0% |
| ! | GAGGGTTTAGGGTTTAGAAA+TGG | + | chr3.3:73812916-73812935 | None:intergenic | 40.0% |
| ! | GTACATACATATTGGGCTAG+AGG | - | chr3.3:73814813-73814832 | MS.gene03199:intron | 40.0% |
| ! | TATGCCATTTCAGGAAACGT+TGG | - | chr3.3:73815683-73815702 | MS.gene03199:intron | 40.0% |
| ! | TATTTTCGAAAGGAAGGAGC+AGG | + | chr3.3:73814972-73814991 | None:intergenic | 40.0% |
| !! | AAGTGAAGGAAAAGGTGTTG+AGG | + | chr3.3:73816210-73816229 | None:intergenic | 40.0% |
| !! | ACTTGTCGCTTTCAAGAGTT+AGG | - | chr3.3:73816594-73816613 | MS.gene03199:intron | 40.0% |
| !!! | CTTGTTTTGCCAGTTTCATC+TGG | - | chr3.3:73815991-73816010 | MS.gene03199:intron | 40.0% |
| AAAGCTGATGAGCGATAGCA+AGG | + | chr3.3:73813031-73813050 | None:intergenic | 45.0% | |
| AAGCTGATGAGCGATAGCAA+GGG | + | chr3.3:73813030-73813049 | None:intergenic | 45.0% | |
| AGCAGGAAGGGAGAAAAATG+TGG | + | chr3.3:73815813-73815832 | None:intergenic | 45.0% | |
| AGGAATCTACCTTGATGCTG+AGG | - | chr3.3:73814026-73814045 | MS.gene03199:intron | 45.0% | |
| AGTCTCTCAGATGCTAACTC+AGG | - | chr3.3:73815967-73815986 | MS.gene03199:intron | 45.0% | |
| ATCTACCTTGATGCTGAGGT+AGG | - | chr3.3:73814030-73814049 | MS.gene03199:intron | 45.0% | |
| CCACTGCATCAACTTTCCAT+TGG | + | chr3.3:73814675-73814694 | None:intergenic | 45.0% | |
| CGACATATCAGATGAGCAGA+AGG | - | chr3.3:73816111-73816130 | MS.gene03199:intron | 45.0% | |
| CGTTTCCTGAAATGGCATAC+AGG | + | chr3.3:73815682-73815701 | None:intergenic | 45.0% | |
| CTCAATGCTAGTGATGATCG+CGG | - | chr3.3:73813086-73813105 | MS.gene03199:intron | 45.0% | |
| GAAAGTCAGGAAAAGCAGGA+AGG | + | chr3.3:73815826-73815845 | None:intergenic | 45.0% | |
| GAATTGCAGTGCCTAGTTGA+TGG | - | chr3.3:73816727-73816746 | MS.gene03199:intron | 45.0% | |
| GCTACGTCTTTCACTTGCTT+TGG | + | chr3.3:73812825-73812844 | None:intergenic | 45.0% | |
| GGATCTCATTTCTGTGTCTG+GGG | - | chr3.3:73815342-73815361 | MS.gene03199:intron | 45.0% | |
| GGCAAGAATATCCAAGAAGC+TGG | - | chr3.3:73816132-73816151 | MS.gene03199:intron | 45.0% | |
| TCGGGCTATAACATACTTGC+AGG | - | chr3.3:73814206-73814225 | MS.gene03199:intron | 45.0% | |
| TGAGTTAGCATCTGAGAGAC+TGG | + | chr3.3:73815968-73815987 | None:intergenic | 45.0% | |
| TGGACGGCTGAAACAAATTG+GGG | + | chr3.3:73812805-73812824 | None:intergenic | 45.0% | |
| TTCAATGACAGAAGATGCCC+AGG | - | chr3.3:73813328-73813347 | MS.gene03199:intron | 45.0% | |
| TTCTCAAGGAGATCTTCGTC+GGG | - | chr3.3:73814188-73814207 | MS.gene03199:CDS | 45.0% | |
| TTTGCACACCTTGAAGCAAG+TGG | + | chr3.3:73813940-73813959 | None:intergenic | 45.0% | |
| ! | AGTAGTGGTTTTTCCAGTGC+CGG | + | chr3.3:73813006-73813025 | None:intergenic | 45.0% |
| ! | CATTCAGAGCACTCAACCAT+GGG | - | chr3.3:73812688-73812707 | MS.gene03199:CDS | 45.0% |
| ! | CCAGAAGGATTTGCTTACGA+GGG | - | chr3.3:73816814-73816833 | MS.gene03199:CDS | 45.0% |
| ! | CGTCTTTCACTTGCTTTGGA+CGG | + | chr3.3:73812821-73812840 | None:intergenic | 45.0% |
| ! | GAAGGTGTGAGTTACCTGTT+TGG | - | chr3.3:73815535-73815554 | MS.gene03199:CDS | 45.0% |
| ! | GACCATAGAAGAGCATGTGT+GGG | + | chr3.3:73812980-73812999 | None:intergenic | 45.0% |
| ! | GCTATCGCTCATCAGCTTTT+CGG | - | chr3.3:73813032-73813051 | MS.gene03199:intron | 45.0% |
| ! | GGTTACTATTTCTCGACCCA+TGG | + | chr3.3:73812707-73812726 | None:intergenic | 45.0% |
| ! | GGTTGAGTGCTCTGAATGAT+TGG | + | chr3.3:73812686-73812705 | None:intergenic | 45.0% |
| ! | TCATTCAGAGCACTCAACCA+TGG | - | chr3.3:73812687-73812706 | MS.gene03199:CDS | 45.0% |
| !! | CCAATGGAAAGTTGATGCAG+TGG | - | chr3.3:73814672-73814691 | MS.gene03199:intron | 45.0% |
| !!! | GGCGGCTGTGCTATTTTTAA+TGG | - | chr3.3:73814070-73814089 | MS.gene03199:intron | 45.0% |
| AAACCAGATTGTTCCAGCGG+AGG | - | chr3.3:73815856-73815875 | MS.gene03199:intron | 50.0% | |
| ACTTACGCTTCCGGTTTCGA+GGG | + | chr3.3:73812883-73812902 | None:intergenic | 50.0% | |
| AGGTTCCTACCTCAGCATCA+AGG | + | chr3.3:73814038-73814057 | None:intergenic | 50.0% | |
| ATGCTCTTCTATGGTCCTCC+CGG | - | chr3.3:73812984-73813003 | MS.gene03199:intron | 50.0% | |
| CAGCCGCCATATAAGCTCTA+AGG | + | chr3.3:73814058-73814077 | None:intergenic | 50.0% | |
| CCATATGCGCAGACAAGTGA+AGG | + | chr3.3:73816224-73816243 | None:intergenic | 50.0% | |
| CCCTCGTAAGCAAATCCTTC+TGG | + | chr3.3:73816817-73816836 | None:intergenic | 50.0% | |
| CCTTCACTTGTCTGCGCATA+TGG | - | chr3.3:73816221-73816240 | MS.gene03199:intron | 50.0% | |
| GCGCAGACAAGTGAAGGAAA+AGG | + | chr3.3:73816218-73816237 | None:intergenic | 50.0% | |
| GGTTACAGAATGCACTGAGG+CGG | - | chr3.3:73813429-73813448 | MS.gene03199:intron | 50.0% | |
| TACTTACGCTTCCGGTTTCG+AGG | + | chr3.3:73812884-73812903 | None:intergenic | 50.0% | |
| TGCCCACACATGCTCTTCTA+TGG | - | chr3.3:73812975-73812994 | MS.gene03199:intron | 50.0% | |
| ! | CTCATTTCTGTGTCTGGGGT+AGG | - | chr3.3:73815346-73815365 | MS.gene03199:intron | 50.0% |
| ! | GCCAGAAGGATTTGCTTACG+AGG | - | chr3.3:73816813-73816832 | MS.gene03199:CDS | 50.0% |
| ! | GGACCATAGAAGAGCATGTG+TGG | + | chr3.3:73812981-73813000 | None:intergenic | 50.0% |
| ! | GTAGTGGTTTTTCCAGTGCC+GGG | + | chr3.3:73813005-73813024 | None:intergenic | 50.0% |
| ! | TGCAGCCTGTATGCCATTTC+AGG | - | chr3.3:73815674-73815693 | MS.gene03199:intron | 50.0% |
| AGCGATAGCAAGGGCAGTAG+TGG | + | chr3.3:73813021-73813040 | None:intergenic | 55.0% | |
| ATCTGCTTCCCCCAGCTTCT+TGG | + | chr3.3:73816146-73816165 | None:intergenic | 55.0% | |
| CAACCTCCGCTGGAACAATC+TGG | + | chr3.3:73815862-73815881 | None:intergenic | 55.0% | |
| CAGTCTGCGGCTCGCTTATT+TGG | - | chr3.3:73815301-73815320 | MS.gene03199:CDS | 55.0% | |
| CTCACCAACACCCTCGAAAC+CGG | - | chr3.3:73812870-73812889 | MS.gene03199:intron | 55.0% | |
| GAAGCTGGGGGAAGCAGATA+AGG | - | chr3.3:73816147-73816166 | MS.gene03199:intron | 55.0% | |
| GATTTCGCTGCTGTCGCTGT+CGG | - | chr3.3:73813137-73813156 | MS.gene03199:intron | 55.0% | |
| TGTTCCAGCGGAGGTTGTTG+AGG | - | chr3.3:73815865-73815884 | MS.gene03199:intron | 55.0% | |
| AGTGCCTCAACAACCTCCGC+TGG | + | chr3.3:73815872-73815891 | None:intergenic | 60.0% | |
| GAATGCACTGAGGCGGACGA+TGG | - | chr3.3:73813436-73813455 | MS.gene03199:intron | 60.0% | |
| TTCTATGGTCCTCCCGGCAC+TGG | - | chr3.3:73812990-73813009 | MS.gene03199:intron | 60.0% | |
| ! | GCTTCCGGTTTCGAGGGTGT+TGG | + | chr3.3:73812877-73812896 | None:intergenic | 60.0% |
| !! | GTGGTTTTTCCAGTGCCGGG+AGG | + | chr3.3:73813002-73813021 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 73812677 | 73816840 | 73812677 | ID=MS.gene03199 |
| chr3.3 | mRNA | 73812677 | 73816840 | 73812677 | ID=MS.gene03199.t1;Parent=MS.gene03199 |
| chr3.3 | exon | 73816797 | 73816840 | 73816797 | ID=MS.gene03199.t1.exon1;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73816797 | 73816840 | 73816797 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73816621 | 73816699 | 73816621 | ID=MS.gene03199.t1.exon2;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73816621 | 73816699 | 73816621 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73816340 | 73816542 | 73816340 | ID=MS.gene03199.t1.exon3;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73816340 | 73816542 | 73816340 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73816168 | 73816237 | 73816168 | ID=MS.gene03199.t1.exon4;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73816168 | 73816237 | 73816168 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73816007 | 73816080 | 73816007 | ID=MS.gene03199.t1.exon5;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73816007 | 73816080 | 73816007 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73815470 | 73815590 | 73815470 | ID=MS.gene03199.t1.exon6;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73815470 | 73815590 | 73815470 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73815290 | 73815352 | 73815290 | ID=MS.gene03199.t1.exon7;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73815290 | 73815352 | 73815290 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73814154 | 73814213 | 73814154 | ID=MS.gene03199.t1.exon8;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73814154 | 73814213 | 73814154 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73813529 | 73813654 | 73813529 | ID=MS.gene03199.t1.exon9;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73813529 | 73813654 | 73813529 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73813349 | 73813432 | 73813349 | ID=MS.gene03199.t1.exon10;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73813349 | 73813432 | 73813349 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| chr3.3 | exon | 73812677 | 73812781 | 73812677 | ID=MS.gene03199.t1.exon11;Parent=MS.gene03199.t1 |
| chr3.3 | CDS | 73812677 | 73812781 | 73812677 | ID=cds.MS.gene03199.t1;Parent=MS.gene03199.t1 |
| Gene Sequence |
| Protein sequence |
