Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053571.t1 | XP_003608428.1 | 99.1 | 445 | 4 | 0 | 1 | 445 | 1 | 445 | 8.60E-258 | 899 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053571.t1 | Q9LXC0 | 84.7 | 444 | 68 | 0 | 1 | 444 | 1 | 444 | 1.5e-223 | 776.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053571.t1 | G7JCQ0 | 99.1 | 445 | 4 | 0 | 1 | 445 | 1 | 445 | 6.2e-258 | 899.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053571 | MS.gene90212 | 0.961128 | 2.41E-119 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048286 | MS.gene053571 | PPI |
| MS.gene053571 | MS.gene26196 | PPI |
| MS.gene049680 | MS.gene053571 | PPI |
| MS.gene21497 | MS.gene053571 | PPI |
| MS.gene053571 | MS.gene015341 | PPI |
| MS.gene055394 | MS.gene053571 | PPI |
| MS.gene99137 | MS.gene053571 | PPI |
| MS.gene02877 | MS.gene053571 | PPI |
| MS.gene05029 | MS.gene053571 | PPI |
| MS.gene053571 | MS.gene33386 | PPI |
| MS.gene053571 | MS.gene09683 | PPI |
| MS.gene053571 | MS.gene34075 | PPI |
| MS.gene01969 | MS.gene053571 | PPI |
| MS.gene009580 | MS.gene053571 | PPI |
| MS.gene55072 | MS.gene053571 | PPI |
| MS.gene005920 | MS.gene053571 | PPI |
| MS.gene008351 | MS.gene053571 | PPI |
| MS.gene54215 | MS.gene053571 | PPI |
| MS.gene053571 | MS.gene061580 | PPI |
| MS.gene024151 | MS.gene053571 | PPI |
| MS.gene033585 | MS.gene053571 | PPI |
| MS.gene063577 | MS.gene053571 | PPI |
| MS.gene068257 | MS.gene053571 | PPI |
| MS.gene053571 | MS.gene065419 | PPI |
| MS.gene053571 | MS.gene24932 | PPI |
| MS.gene003158 | MS.gene053571 | PPI |
| MS.gene037879 | MS.gene053571 | PPI |
| MS.gene053571 | MS.gene017310 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053571.t1 | MTR_4g093980 | 99.101 | 445 | 4 | 0 | 1 | 445 | 1 | 445 | 0.0 | 907 |
| MS.gene053571.t1 | MTR_8g088620 | 80.856 | 444 | 85 | 0 | 1 | 444 | 1 | 444 | 0.0 | 759 |
| MS.gene053571.t1 | MTR_5g024150 | 26.972 | 393 | 211 | 13 | 5 | 327 | 18 | 404 | 6.79e-27 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053571.t1 | AT5G09550 | 84.685 | 444 | 68 | 0 | 1 | 444 | 1 | 444 | 0.0 | 785 |
| MS.gene053571.t1 | AT2G44100 | 78.202 | 445 | 97 | 0 | 1 | 445 | 1 | 445 | 0.0 | 739 |
| MS.gene053571.t1 | AT3G59920 | 77.703 | 444 | 99 | 0 | 1 | 444 | 1 | 444 | 0.0 | 739 |
| MS.gene053571.t1 | AT2G44100 | 77.674 | 430 | 96 | 0 | 1 | 430 | 1 | 430 | 0.0 | 715 |
| MS.gene053571.t1 | AT3G06540 | 25.225 | 444 | 235 | 14 | 5 | 361 | 15 | 448 | 8.26e-23 | 101 |
Find 106 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGCTATTTAAGCGATTT+AGG | 0.117749 | 4.4:-21328882 | MS.gene053571:intron |
| GATGATACAGTTGACTTTAT+TGG | 0.182516 | 4.4:-21327661 | MS.gene053571:CDS |
| GGCACTGAAGTCACCTTTAA+TGG | 0.213355 | 4.4:-21328201 | MS.gene053571:CDS |
| TTGTCCAAATGCAGCAAATA+TGG | 0.234329 | 4.4:-21327691 | MS.gene053571:intron |
| CACAAACTTACCTTGCATTC+TGG | 0.280608 | 4.4:+21326670 | None:intergenic |
| TTCTCAAACAGACCCATTAA+AGG | 0.296833 | 4.4:+21328188 | None:intergenic |
| AGTGGTCTTCTCTCTGTTGA+TGG | 0.304892 | 4.4:-21329666 | MS.gene053571:CDS |
| TGACAAGCTACCAGAGGAAT+TGG | 0.318365 | 4.4:-21328854 | MS.gene053571:CDS |
| ATAGCTATTTAAGCGATTTA+GGG | 0.336658 | 4.4:-21328881 | MS.gene053571:intron |
| GATCATTAGCTTCATAATCT+TGG | 0.340169 | 4.4:+21328135 | None:intergenic |
| CCTTACATATATCCACTATA+TGG | 0.373214 | 4.4:-21326838 | MS.gene053571:CDS |
| ATGGATCAAAATGACTACTA+TGG | 0.385668 | 4.4:-21329036 | MS.gene053571:CDS |
| TCATCTTGATGACAGTTACT+TGG | 0.390099 | 4.4:-21327623 | MS.gene053571:CDS |
| TATGATGGCCAATGGAGCTT+TGG | 0.414944 | 4.4:-21328463 | MS.gene053571:CDS |
| AGTGCCTCAACATCTGTTGC+TGG | 0.426848 | 4.4:+21328218 | None:intergenic |
| GAGTCGTTAGTGTCTGGAAT+AGG | 0.427675 | 4.4:+21326172 | None:intergenic |
| TGTTTGAGAAGCGCCGGGCT+CGG | 0.429684 | 4.4:-21328175 | MS.gene053571:CDS |
| TCATGTCAACATTGTATTCT+CGG | 0.431332 | 4.4:+21328824 | None:intergenic |
| TCTAGCAGATATACCTTGTC+AGG | 0.432373 | 4.4:+21326374 | None:intergenic |
| ATCAAGTCCTTCGTGAGACT+TGG | 0.434472 | 4.4:+21328112 | None:intergenic |
| CTGAACTTTAAAGCTGTAGA+TGG | 0.445888 | 4.4:-21328405 | MS.gene053571:CDS |
| GAGCATAAGAGCAGCAGAAA+AGG | 0.457022 | 4.4:+21326006 | None:intergenic |
| GCACTGAAGTCACCTTTAAT+GGG | 0.461818 | 4.4:-21328200 | MS.gene053571:CDS |
| GGTCCAAGGAGATCGATTCC+AGG | 0.462358 | 4.4:+21325903 | None:intergenic |
| CTCAAGGAATGCATCCTTAG+TGG | 0.471649 | 4.4:-21329684 | MS.gene053571:CDS |
| GTGGTTTCAAAGTGTGTTGT+GGG | 0.472100 | 4.4:+21325690 | None:intergenic |
| GAGTGAGAGTCGTTAGTGTC+TGG | 0.477098 | 4.4:+21326166 | None:intergenic |
| TGGGTCTGTTTGAGAAGCGC+CGG | 0.477888 | 4.4:-21328181 | MS.gene053571:CDS |
| TCAGCTGTCTTGCTGTAACT+TGG | 0.480690 | 4.4:+21328084 | None:intergenic |
| CGGCTAGAGCCCAATTCCTC+TGG | 0.480916 | 4.4:+21328844 | None:intergenic |
| ACCTTGTCAGGCAGATATGA+TGG | 0.484809 | 4.4:+21326386 | None:intergenic |
| GATGTAATTGTCCTCGGCAC+TGG | 0.486932 | 4.4:-21329708 | MS.gene053571:CDS |
| CAAATGCAGCAAATATGGAT+TGG | 0.489275 | 4.4:-21327686 | MS.gene053571:intron |
| CCTCAGGTGGAATTGAAGCC+TGG | 0.489518 | 4.4:-21325921 | MS.gene053571:CDS |
| AGCTGAGACTGACCAACCTC+AGG | 0.491525 | 4.4:-21325937 | MS.gene053571:CDS |
| CATATATCCACTATATGGAC+TGG | 0.492691 | 4.4:-21326833 | MS.gene053571:CDS |
| GCTCGGTTGAGTGCTGTGTA+TGG | 0.493867 | 4.4:-21326715 | MS.gene053571:CDS |
| TAGGTAGAGTTTGACGCTGA+TGG | 0.507482 | 4.4:-21326470 | MS.gene053571:CDS |
| AAATGAAGAACTTCCGAGCC+CGG | 0.511161 | 4.4:+21328162 | None:intergenic |
| TGGTAGTTTATGATGGCCAA+TGG | 0.511335 | 4.4:-21328471 | MS.gene053571:intron |
| GACAAGCTACCAGAGGAATT+GGG | 0.512626 | 4.4:-21328853 | MS.gene053571:CDS |
| ACCATCAGTAGCATGATCAT+TGG | 0.514853 | 4.4:+21325836 | None:intergenic |
| AAGCCTGGAATCGATCTCCT+TGG | 0.519075 | 4.4:-21325906 | MS.gene053571:CDS |
| GCCATCGGTGTGACTTCAGA+TGG | 0.519822 | 4.4:-21326443 | MS.gene053571:CDS |
| CTGTCCACAAAATCCTTAGC+TGG | 0.520365 | 4.4:+21327595 | None:intergenic |
| CTGCAGCACTTGCAGCACTC+AGG | 0.521016 | 4.4:+21325437 | None:intergenic |
| CCATATAGTGGATATATGTA+AGG | 0.525515 | 4.4:+21326838 | None:intergenic |
| AACTCTCCCAGTCCATATAG+TGG | 0.528131 | 4.4:+21326826 | None:intergenic |
| CACACGAACCAAAGCTCCAT+TGG | 0.528527 | 4.4:+21328455 | None:intergenic |
| AGGTAGAGTTTGACGCTGAT+GGG | 0.530777 | 4.4:-21326469 | MS.gene053571:CDS |
| TGTGGTTTCAAAGTGTGTTG+TGG | 0.530952 | 4.4:+21325689 | None:intergenic |
| ATCAAAATGACTACTATGGA+GGG | 0.531635 | 4.4:-21329032 | MS.gene053571:CDS |
| ATCAGTAGCATGATCATTGG+TGG | 0.535403 | 4.4:+21325839 | None:intergenic |
| CCAGGCTTCAATTCCACCTG+AGG | 0.541595 | 4.4:+21325921 | None:intergenic |
| TGTCCTCGGCACTGGCCTCA+AGG | 0.549809 | 4.4:-21329700 | MS.gene053571:CDS |
| ATTCTGCCACAGAAGCAACT+TGG | 0.552217 | 4.4:-21326133 | MS.gene053571:CDS |
| TCAAGTCCTTCGTGAGACTT+GGG | 0.552859 | 4.4:+21328113 | None:intergenic |
| ATCCAACAGGTTCAAAACGT+TGG | 0.556173 | 4.4:-21326229 | MS.gene053571:intron |
| ATTACTGGAAGGCATTTGCT+CGG | 0.557422 | 4.4:-21326732 | MS.gene053571:intron |
| TTGGTCAGTCTCAGCTTCTG+TGG | 0.560618 | 4.4:+21325944 | None:intergenic |
| TTACGACCAAGTTGCTTCTG+TGG | 0.561237 | 4.4:+21326127 | None:intergenic |
| CAGATGTACAGTAAGATCAC+TGG | 0.563791 | 4.4:-21325651 | MS.gene053571:CDS |
| GCTTCAATTCCACCTGAGGT+TGG | 0.567079 | 4.4:+21325925 | None:intergenic |
| TTACTTGGATAAGCCAGCTA+AGG | 0.567941 | 4.4:-21327608 | MS.gene053571:CDS |
| GAGTATGATGTAATTGTCCT+CGG | 0.574662 | 4.4:-21329714 | MS.gene053571:CDS |
| TCCATCTGAAGTCACACCGA+TGG | 0.574997 | 4.4:+21326442 | None:intergenic |
| GACGCTGATGGGAAAGCCAT+CGG | 0.579371 | 4.4:-21326458 | MS.gene053571:CDS |
| TGGACTGGGAGAGTTGCCTC+AGG | 0.580060 | 4.4:-21326818 | MS.gene053571:intron |
| GGGTCTGTTTGAGAAGCGCC+GGG | 0.581340 | 4.4:-21328180 | MS.gene053571:CDS |
| GTTCAGATACTTTGTAACAT+CGG | 0.582634 | 4.4:+21328422 | None:intergenic |
| TGGAAGCTTTGTGTATAACA+AGG | 0.583286 | 4.4:-21328385 | MS.gene053571:CDS |
| GCTGAATAAACCAGAATGCA+AGG | 0.583808 | 4.4:-21326680 | MS.gene053571:intron |
| TCATAGAAGATCTCATCGAC+TGG | 0.589050 | 4.4:+21325882 | None:intergenic |
| AGACACTAACGACTCTCACT+CGG | 0.589228 | 4.4:-21326164 | MS.gene053571:CDS |
| TACATCATACTCTTCATCCA+TGG | 0.591911 | 4.4:+21329725 | None:intergenic |
| GTCATCAAGATGAAGTGCTA+AGG | 0.592615 | 4.4:+21327633 | None:intergenic |
| GGTAAATCAGGTGTTGCACA+TGG | 0.593570 | 4.4:-21329055 | MS.gene053571:intron |
| GATCAAAATGACTACTATGG+AGG | 0.599865 | 4.4:-21329033 | MS.gene053571:CDS |
| CGGTTGAGTGCTGTGTATGG+TGG | 0.604718 | 4.4:-21326712 | MS.gene053571:CDS |
| ACCAATGATCATGCTACTGA+TGG | 0.607857 | 4.4:-21325837 | MS.gene053571:CDS |
| AGATCTCATCGACTGGTCCA+AGG | 0.610382 | 4.4:+21325889 | None:intergenic |
| TCAGTAGCATGATCATTGGT+GGG | 0.611320 | 4.4:+21325840 | None:intergenic |
| TGAGACTGACCAACCTCAGG+TGG | 0.613165 | 4.4:-21325934 | MS.gene053571:CDS |
| TAGCTATTTAAGCGATTTAG+GGG | 0.616783 | 4.4:-21328880 | MS.gene053571:CDS |
| CAACAGAGAGAAGACCACTA+AGG | 0.618184 | 4.4:+21329670 | None:intergenic |
| AACCTCCTTGAAAACGTGCG+AGG | 0.621024 | 4.4:+21326863 | None:intergenic |
| CGTTAGTGTCTGGAATAGGA+TGG | 0.621499 | 4.4:+21326176 | None:intergenic |
| CTTTGTGTATAACAAGGGAA+AGG | 0.626697 | 4.4:-21328379 | MS.gene053571:intron |
| CTGTGTGAGATTAAGAGATG+TGG | 0.627691 | 4.4:+21329005 | None:intergenic |
| TCAAAATGACTACTATGGAG+GGG | 0.629297 | 4.4:-21329031 | MS.gene053571:CDS |
| TCCATCATATCTGCCTGACA+AGG | 0.629352 | 4.4:-21326387 | MS.gene053571:intron |
| GGAAGCTTTGTGTATAACAA+GGG | 0.632018 | 4.4:-21328384 | MS.gene053571:CDS |
| ACCTCCTTGAAAACGTGCGA+GGG | 0.634132 | 4.4:+21326864 | None:intergenic |
| AGTTCCAGCAACAGATGTTG+AGG | 0.634985 | 4.4:-21328222 | MS.gene053571:CDS |
| GTACAGTAAGATCACTGGAA+AGG | 0.642420 | 4.4:-21325646 | MS.gene053571:intron |
| CAATGTTGACATGATACCGA+AGG | 0.644447 | 4.4:-21328815 | MS.gene053571:intron |
| ATATATCCACTATATGGACT+GGG | 0.645856 | 4.4:-21326832 | MS.gene053571:CDS |
| ATTCCTTGAGGCCAGTGCCG+AGG | 0.649743 | 4.4:+21329697 | None:intergenic |
| GATACTTTGTAACATCGGTG+TGG | 0.650713 | 4.4:+21328427 | None:intergenic |
| CTGAACCACATCTTTCACTG+TGG | 0.652632 | 4.4:+21325671 | None:intergenic |
| TGAAACCACAGTGAAAGATG+TGG | 0.658531 | 4.4:-21325676 | MS.gene053571:CDS |
| CACATCTCTTAATCTCACAC+AGG | 0.661671 | 4.4:-21329004 | MS.gene053571:intron |
| CACTAAGGATGCATTCCTTG+AGG | 0.669251 | 4.4:+21329685 | None:intergenic |
| GCTCACAATGTAGCTCCCAA+AGG | 0.685105 | 4.4:-21325987 | MS.gene053571:CDS |
| GGGAGATGACAAGCTACCAG+AGG | 0.712709 | 4.4:-21328860 | MS.gene053571:CDS |
| AATGATCCCAAGTCTCACGA+AGG | 0.713085 | 4.4:-21328119 | MS.gene053571:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTATTTAATTAT+TGG | - | chr4.4:21328825-21328844 | MS.gene053571:CDS | 0.0% |
| !!! | TATTATCTTTTATTTTCATA+TGG | - | chr4.4:21329644-21329663 | MS.gene053571:intron | 10.0% |
| !!! | TATTTTTGTTTTATTTTTTC+AGG | - | chr4.4:21329670-21329689 | MS.gene053571:CDS | 10.0% |
| !! | AAAAAAAAACTTCAAATTGA+AGG | + | chr4.4:21325788-21325807 | None:intergenic | 15.0% |
| !! | AAATTGAAGTTAGATTTAAA+GGG | + | chr4.4:21327146-21327165 | None:intergenic | 15.0% |
| !! | AATTTCATTATATTGTTTGT+CGG | + | chr4.4:21329374-21329393 | None:intergenic | 15.0% |
| !! | ACAAAATTTAATCATGTAAT+AGG | + | chr4.4:21326047-21326066 | None:intergenic | 15.0% |
| !! | ATAAAAGATAATATTCACAA+AGG | + | chr4.4:21329637-21329656 | None:intergenic | 15.0% |
| !! | ATATATTTGTAATTGACAAT+AGG | + | chr4.4:21325962-21325981 | None:intergenic | 15.0% |
| !! | TAAAAGATAATATTCACAAA+GGG | + | chr4.4:21329636-21329655 | None:intergenic | 15.0% |
| !! | TCTCAAATTATTATTATTAC+CGG | + | chr4.4:21325689-21325708 | None:intergenic | 15.0% |
| !! | TTTAAAAGGAAATATAGATA+TGG | + | chr4.4:21328361-21328380 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAGAGAAAAATA+AGG | + | chr4.4:21329402-21329421 | None:intergenic | 15.0% |
| !!! | TTTTAATTATGCTTTTTTCT+TGG | - | chr4.4:21326601-21326620 | MS.gene053571:intron | 15.0% |
| !!! | TTTTCTCAGATAAATTTATA+AGG | - | chr4.4:21328224-21328243 | MS.gene053571:CDS | 15.0% |
| !! | AAACACTTTCAAATATACTT+TGG | - | chr4.4:21329555-21329574 | MS.gene053571:intron | 20.0% |
| !! | AAATTTAATCATGTAATAGG+TGG | + | chr4.4:21326044-21326063 | None:intergenic | 20.0% |
| !! | AATGAAATAAAAATCTGATG+TGG | + | chr4.4:21327249-21327268 | None:intergenic | 20.0% |
| !! | ATCGAAACATTGATATTTAT+CGG | - | chr4.4:21326443-21326462 | MS.gene053571:CDS | 20.0% |
| !! | CAAATTGAAGTTAGATTTAA+AGG | + | chr4.4:21327147-21327166 | None:intergenic | 20.0% |
| !! | CTTTATTAAATGCATGAAAA+AGG | - | chr4.4:21327889-21327908 | MS.gene053571:intron | 20.0% |
| !! | GTATATCTTACTTTGTATTA+AGG | + | chr4.4:21328063-21328082 | None:intergenic | 20.0% |
| !! | TATATTAGTACTTATGTTTG+AGG | + | chr4.4:21327677-21327696 | None:intergenic | 20.0% |
| !! | TCAAAAGAAAGTAAAACATA+TGG | + | chr4.4:21326807-21326826 | None:intergenic | 20.0% |
| !! | TTGTAAAACAATTTCTAATG+AGG | - | chr4.4:21326532-21326551 | MS.gene053571:intron | 20.0% |
| !!! | AAAAGCAATATATTTTCCTT+TGG | + | chr4.4:21329181-21329200 | None:intergenic | 20.0% |
| !!! | AAAGCAATATATTTTCCTTT+GGG | + | chr4.4:21329180-21329199 | None:intergenic | 20.0% |
| !!! | ATTTTAGTATTCTTGTACAT+AGG | - | chr4.4:21328660-21328679 | MS.gene053571:intron | 20.0% |
| !!! | TTGAATCAAAGTATTGAATT+CGG | + | chr4.4:21327413-21327432 | None:intergenic | 20.0% |
| ! | AAAACCGTAATACTTTATTG+TGG | + | chr4.4:21328024-21328043 | None:intergenic | 25.0% |
| ! | AAGATATACACCTTTGATAA+GGG | - | chr4.4:21328074-21328093 | MS.gene053571:intron | 25.0% |
| ! | AATATGAGAAAAGTTACCTT+CGG | + | chr4.4:21326353-21326372 | None:intergenic | 25.0% |
| ! | ATAAAAGCCATATAACTTCT+AGG | + | chr4.4:21327861-21327880 | None:intergenic | 25.0% |
| ! | ATAAACTACCATAAAACAGA+TGG | + | chr4.4:21326669-21326688 | None:intergenic | 25.0% |
| ! | ATAGCTATTTAAGCGATTTA+GGG | - | chr4.4:21326268-21326287 | MS.gene053571:intron | 25.0% |
| ! | ATATTGAAAATCTGCATAAG+AGG | + | chr4.4:21326178-21326197 | None:intergenic | 25.0% |
| ! | CATAAATACAGTCCAAATTA+TGG | + | chr4.4:21326632-21326651 | None:intergenic | 25.0% |
| ! | CATAATTTGGACTGTATTTA+TGG | - | chr4.4:21326630-21326649 | MS.gene053571:intron | 25.0% |
| ! | TAAGATATACACCTTTGATA+AGG | - | chr4.4:21328073-21328092 | MS.gene053571:intron | 25.0% |
| ! | TACAAGAATACTAAAATGTG+AGG | + | chr4.4:21328657-21328676 | None:intergenic | 25.0% |
| ! | TATAGCTATTTAAGCGATTT+AGG | - | chr4.4:21326267-21326286 | MS.gene053571:intron | 25.0% |
| ! | TATATCTGCTAGATTTCTAA+GGG | - | chr4.4:21328785-21328804 | MS.gene053571:intron | 25.0% |
| ! | TATGAAAAATTCTGTAGAGA+TGG | - | chr4.4:21327695-21327714 | MS.gene053571:intron | 25.0% |
| ! | TCTAAAAAGATGACATTAGA+TGG | - | chr4.4:21325813-21325832 | MS.gene053571:intron | 25.0% |
| ! | TCTTCATAATGCTTTAATGA+TGG | + | chr4.4:21327300-21327319 | None:intergenic | 25.0% |
| ! | TGAATGAATGAATTACTTTG+AGG | + | chr4.4:21325509-21325528 | None:intergenic | 25.0% |
| ! | TGATGCTAAATTCTAATAGA+TGG | + | chr4.4:21328129-21328148 | None:intergenic | 25.0% |
| ! | TGATGTAGAAAAGAAAAATC+AGG | + | chr4.4:21327747-21327766 | None:intergenic | 25.0% |
| ! | TTATTATTATTACCGGTGTT+TGG | + | chr4.4:21325682-21325701 | None:intergenic | 25.0% |
| ! | TTTAAAGGGATGTAAAATCA+AGG | + | chr4.4:21327132-21327151 | None:intergenic | 25.0% |
| !! | CAATTTTATGTATGTGTGTA+TGG | - | chr4.4:21328601-21328620 | MS.gene053571:intron | 25.0% |
| !! | GAAATTTTCTGTTGATCTAA+AGG | + | chr4.4:21326382-21326401 | None:intergenic | 25.0% |
| !! | TGTTTTATGGTAGTTTATGA+TGG | - | chr4.4:21326671-21326690 | MS.gene053571:intron | 25.0% |
| !! | TTCTTGGATTTTCCATAATT+TGG | - | chr4.4:21326617-21326636 | MS.gene053571:intron | 25.0% |
| !!! | AAAAACTATGCAATTTGCTA+AGG | - | chr4.4:21326555-21326574 | MS.gene053571:intron | 25.0% |
| !!! | ACAGTTTTTAGTAAAGCTTT+TGG | + | chr4.4:21327775-21327794 | None:intergenic | 25.0% |
| !!! | AGTATAGATGTTTTGTTTCA+TGG | - | chr4.4:21326208-21326227 | MS.gene053571:CDS | 25.0% |
| AAAATAGTTCACTGAATCAC+TGG | + | chr4.4:21327342-21327361 | None:intergenic | 30.0% | |
| AATAAGCCGAAGAAAAAGAA+AGG | + | chr4.4:21327109-21327128 | None:intergenic | 30.0% | |
| AATTCGGTTAAAATAACTGC+TGG | + | chr4.4:21327397-21327416 | None:intergenic | 30.0% | |
| ACAGCTTAAAGTAATTCAAC+TGG | + | chr4.4:21328530-21328549 | None:intergenic | 30.0% | |
| ACATATGCCAAATGACTATA+TGG | + | chr4.4:21328202-21328221 | None:intergenic | 30.0% | |
| AGCTTTACTAAAAACTGTGA+AGG | - | chr4.4:21327777-21327796 | MS.gene053571:intron | 30.0% | |
| ATATAGATATGGAAAACCTG+AGG | + | chr4.4:21328350-21328369 | None:intergenic | 30.0% | |
| ATATATCCACTATATGGACT+GGG | - | chr4.4:21328317-21328336 | MS.gene053571:intron | 30.0% | |
| ATCAAAATGACTACTATGGA+GGG | - | chr4.4:21326117-21326136 | MS.gene053571:intron | 30.0% | |
| ATCAACTAACATGTAGCAAT+TGG | + | chr4.4:21325996-21326015 | None:intergenic | 30.0% | |
| ATCATGACCATATAGTCATT+TGG | - | chr4.4:21328192-21328211 | MS.gene053571:CDS | 30.0% | |
| ATGAATCGCATACACAAATT+TGG | - | chr4.4:21325635-21325654 | MS.gene053571:intron | 30.0% | |
| ATGGATCAAAATGACTACTA+TGG | - | chr4.4:21326113-21326132 | MS.gene053571:intron | 30.0% | |
| ATTCTTCTTAGTACTTACTG+TGG | + | chr4.4:21329349-21329368 | None:intergenic | 30.0% | |
| CAAAACAAGCATAATGATAG+TGG | + | chr4.4:21328170-21328189 | None:intergenic | 30.0% | |
| CAAAGATCCTAGAAGTTATA+TGG | - | chr4.4:21327851-21327870 | MS.gene053571:intron | 30.0% | |
| CACTATTTAATCAATCCAAC+AGG | - | chr4.4:21328907-21328926 | MS.gene053571:intron | 30.0% | |
| CCATAAAACAGATGGAAAAT+TGG | + | chr4.4:21326661-21326680 | None:intergenic | 30.0% | |
| CCTTACATATATCCACTATA+TGG | - | chr4.4:21328311-21328330 | MS.gene053571:intron | 30.0% | |
| GAATTACTTTAAGCTGTGTT+AGG | - | chr4.4:21328533-21328552 | MS.gene053571:intron | 30.0% | |
| GATCAAATGTAACTACATGT+TGG | - | chr4.4:21325719-21325738 | MS.gene053571:intron | 30.0% | |
| GTATATCTGCTAGATTTCTA+AGG | - | chr4.4:21328784-21328803 | MS.gene053571:intron | 30.0% | |
| GTTCAGATACTTTGTAACAT+CGG | + | chr4.4:21326730-21326749 | None:intergenic | 30.0% | |
| GTTGGATTGATTAAATAGTG+AGG | + | chr4.4:21328907-21328926 | None:intergenic | 30.0% | |
| TAGCTATTTAAGCGATTTAG+GGG | - | chr4.4:21326269-21326288 | MS.gene053571:intron | 30.0% | |
| TCAATGTTTCGATGCTTTAT+CGG | + | chr4.4:21326436-21326455 | None:intergenic | 30.0% | |
| TCATGTCAACATTGTATTCT+CGG | + | chr4.4:21326328-21326347 | None:intergenic | 30.0% | |
| TGAGGAGAAATACATAGAAA+AGG | + | chr4.4:21328639-21328658 | None:intergenic | 30.0% | |
| TTAATTCCACACAAGCTAAT+CGG | - | chr4.4:21329092-21329111 | MS.gene053571:intron | 30.0% | |
| TTTACCAAGAATTGTGTCAA+AGG | + | chr4.4:21326080-21326099 | None:intergenic | 30.0% | |
| ! | AAACAATGAAACACTAGTCT+TGG | + | chr4.4:21329607-21329626 | None:intergenic | 30.0% |
| ! | AAGGCCACAATAAAGTATTA+CGG | - | chr4.4:21328017-21328036 | MS.gene053571:intron | 30.0% |
| ! | ATACTTTATTGTGGCCTTTT+TGG | + | chr4.4:21328015-21328034 | None:intergenic | 30.0% |
| ! | CCAATTTTCCATCTGTTTTA+TGG | - | chr4.4:21326658-21326677 | MS.gene053571:intron | 30.0% |
| ! | GATCATTAGCTTCATAATCT+TGG | + | chr4.4:21327017-21327036 | None:intergenic | 30.0% |
| ! | GATGATACAGTTGACTTTAT+TGG | - | chr4.4:21327488-21327507 | MS.gene053571:intron | 30.0% |
| ! | TATGCTTTTGTAGAGTGATA+TGG | - | chr4.4:21327608-21327627 | MS.gene053571:CDS | 30.0% |
| ! | TGTATTAAGGATTTAGCTTC+TGG | + | chr4.4:21328050-21328069 | None:intergenic | 30.0% |
| !! | ACTTCGATACTTTTGATTAC+TGG | - | chr4.4:21328402-21328421 | MS.gene053571:CDS | 30.0% |
| !! | CCATATAGTGGATATATGTA+AGG | + | chr4.4:21328314-21328333 | None:intergenic | 30.0% |
| !! | CTCTGCAAGGATTTAATTTT+AGG | + | chr4.4:21329432-21329451 | None:intergenic | 30.0% |
| ACTACATGTTGGCATCATAT+CGG | - | chr4.4:21325730-21325749 | MS.gene053571:intron | 35.0% | |
| ATATAGTTACCAACCTACCA+CGG | - | chr4.4:21327912-21327931 | MS.gene053571:intron | 35.0% | |
| ATGAAACCTCTTGCATATTG+AGG | - | chr4.4:21326856-21326875 | MS.gene053571:CDS | 35.0% | |
| CAAATGCAGCAAATATGGAT+TGG | - | chr4.4:21327463-21327482 | MS.gene053571:intron | 35.0% | |
| CATATATCCACTATATGGAC+TGG | - | chr4.4:21328316-21328335 | MS.gene053571:intron | 35.0% | |
| CTAGGATCTTTGAGTCATTA+AGG | + | chr4.4:21327843-21327862 | None:intergenic | 35.0% | |
| CTTTGTGTATAACAAGGGAA+AGG | - | chr4.4:21326770-21326789 | MS.gene053571:intron | 35.0% | |
| GACACAATTCTTGGTAAATC+AGG | - | chr4.4:21326082-21326101 | MS.gene053571:intron | 35.0% | |
| GAGTATGATGTAATTGTCCT+CGG | - | chr4.4:21325435-21325454 | MS.gene053571:CDS | 35.0% | |
| GATCAAAATGACTACTATGG+AGG | - | chr4.4:21326116-21326135 | MS.gene053571:intron | 35.0% | |
| TCAAAATGACTACTATGGAG+GGG | - | chr4.4:21326118-21326137 | MS.gene053571:CDS | 35.0% | |
| TCAATATGCAAGAGGTTTCA+TGG | + | chr4.4:21326857-21326876 | None:intergenic | 35.0% | |
| TGCAGTGGTTTATCATATAC+CGG | - | chr4.4:21327644-21327663 | MS.gene053571:CDS | 35.0% | |
| TGTAGAGTGATATGGTTTGA+AGG | - | chr4.4:21327616-21327635 | MS.gene053571:CDS | 35.0% | |
| TTCTCAAACAGACCCATTAA+AGG | + | chr4.4:21326964-21326983 | None:intergenic | 35.0% | |
| TTGTCCAAATGCAGCAAATA+TGG | - | chr4.4:21327458-21327477 | MS.gene053571:intron | 35.0% | |
| ! | ACATAGAAGCATGTCCAAAA+AGG | - | chr4.4:21327998-21328017 | MS.gene053571:intron | 35.0% |
| ! | CAATCCATATTTGCTGCATT+TGG | + | chr4.4:21327465-21327484 | None:intergenic | 35.0% |
| ! | CTGCTTCCTTTCTTTTTCTT+CGG | - | chr4.4:21327100-21327119 | MS.gene053571:intron | 35.0% |
| ! | GATTTTCCTCAATATGCAAG+AGG | + | chr4.4:21326865-21326884 | None:intergenic | 35.0% |
| ! | GGAAGCTTTGTGTATAACAA+GGG | - | chr4.4:21326765-21326784 | MS.gene053571:intron | 35.0% |
| ! | TCATCTTGATGACAGTTACT+TGG | - | chr4.4:21327526-21327545 | MS.gene053571:intron | 35.0% |
| ! | TGGAAGCTTTGTGTATAACA+AGG | - | chr4.4:21326764-21326783 | MS.gene053571:intron | 35.0% |
| ! | TTATGTTTGAGGTCGAATAC+CGG | + | chr4.4:21327666-21327685 | None:intergenic | 35.0% |
| !! | CGATACTTTTGATTACTGGA+AGG | - | chr4.4:21328406-21328425 | MS.gene053571:CDS | 35.0% |
| !! | CTGAACTTTAAAGCTGTAGA+TGG | - | chr4.4:21326744-21326763 | MS.gene053571:intron | 35.0% |
| !! | TAATCGGTTTGTGATTTCCA+TGG | - | chr4.4:21329108-21329127 | MS.gene053571:intron | 35.0% |
| !!! | GTCTAGTTTTCCCTTATCAA+AGG | + | chr4.4:21328087-21328106 | None:intergenic | 35.0% |
| ACCAATGATCATGCTACTGA+TGG | - | chr4.4:21329312-21329331 | MS.gene053571:intron | 40.0% | |
| ACCATCAGTAGCATGATCAT+TGG | + | chr4.4:21329316-21329335 | None:intergenic | 40.0% | |
| ATCAGTAGCATGATCATTGG+TGG | + | chr4.4:21329313-21329332 | None:intergenic | 40.0% | |
| ATCCAACAGGTTCAAAACGT+TGG | - | chr4.4:21328920-21328939 | MS.gene053571:intron | 40.0% | |
| CAATGTTGACATGATACCGA+AGG | - | chr4.4:21326334-21326353 | MS.gene053571:intron | 40.0% | |
| CACAAACTTACCTTGCATTC+TGG | + | chr4.4:21328482-21328501 | None:intergenic | 40.0% | |
| CACATCTCTTAATCTCACAC+AGG | - | chr4.4:21326145-21326164 | MS.gene053571:CDS | 40.0% | |
| CAGATGTACAGTAAGATCAC+TGG | - | chr4.4:21329498-21329517 | MS.gene053571:intron | 40.0% | |
| CATGTAGCAATTGGCATGAT+TGG | + | chr4.4:21325987-21326006 | None:intergenic | 40.0% | |
| CTGTGTGAGATTAAGAGATG+TGG | + | chr4.4:21326147-21326166 | None:intergenic | 40.0% | |
| GACAATAGGCAAATCTCACT+AGG | + | chr4.4:21325948-21325967 | None:intergenic | 40.0% | |
| GATACTTTGTAACATCGGTG+TGG | + | chr4.4:21326725-21326744 | None:intergenic | 40.0% | |
| GCACTGAAGTCACCTTTAAT+GGG | - | chr4.4:21326949-21326968 | MS.gene053571:intron | 40.0% | |
| GCTGAATAAACCAGAATGCA+AGG | - | chr4.4:21328469-21328488 | MS.gene053571:intron | 40.0% | |
| GTACAGTAAGATCACTGGAA+AGG | - | chr4.4:21329503-21329522 | MS.gene053571:intron | 40.0% | |
| GTGATTTCCATGGTTATTGC+AGG | - | chr4.4:21329118-21329137 | MS.gene053571:intron | 40.0% | |
| GTGGTTTCAAAGTGTGTTGT+GGG | + | chr4.4:21329462-21329481 | None:intergenic | 40.0% | |
| GTTGCCTTTGACACAATTCT+TGG | - | chr4.4:21326073-21326092 | MS.gene053571:intron | 40.0% | |
| GTTTATGCTCACATCAAGTG+AGG | + | chr4.4:21327191-21327210 | None:intergenic | 40.0% | |
| TCAGTAGCATGATCATTGGT+GGG | + | chr4.4:21329312-21329331 | None:intergenic | 40.0% | |
| TCATAGAAGATCTCATCGAC+TGG | + | chr4.4:21329270-21329289 | None:intergenic | 40.0% | |
| TCTAGCAGATATACCTTGTC+AGG | + | chr4.4:21328778-21328797 | None:intergenic | 40.0% | |
| TGAAACCACAGTGAAAGATG+TGG | - | chr4.4:21329473-21329492 | MS.gene053571:intron | 40.0% | |
| TGGTAGTTTATGATGGCCAA+TGG | - | chr4.4:21326678-21326697 | MS.gene053571:intron | 40.0% | |
| TGTGGTTTCAAAGTGTGTTG+TGG | + | chr4.4:21329463-21329482 | None:intergenic | 40.0% | |
| TTACTTGGATAAGCCAGCTA+AGG | - | chr4.4:21327541-21327560 | MS.gene053571:intron | 40.0% | |
| ! | GGATTTTGTGGACAGAGTTA+AGG | - | chr4.4:21327562-21327581 | MS.gene053571:intron | 40.0% |
| ! | GTCATCAAGATGAAGTGCTA+AGG | + | chr4.4:21327519-21327538 | None:intergenic | 40.0% |
| ! | TAAGCCAGCTAAGGATTTTG+TGG | - | chr4.4:21327550-21327569 | MS.gene053571:intron | 40.0% |
| !! | AAAGGTACCTGCAATAACCA+TGG | + | chr4.4:21329128-21329147 | None:intergenic | 40.0% |
| !! | ATCATATGCGACTTGCTAAC+TGG | + | chr4.4:21327366-21327385 | None:intergenic | 40.0% |
| !! | ATTACTGGAAGGCATTTGCT+CGG | - | chr4.4:21328417-21328436 | MS.gene053571:CDS | 40.0% |
| !! | TTCCAACGTTTTGAACCTGT+TGG | + | chr4.4:21328925-21328944 | None:intergenic | 40.0% |
| AAATGAAGAACTTCCGAGCC+CGG | + | chr4.4:21326990-21327009 | None:intergenic | 45.0% | |
| AACTCTCCCAGTCCATATAG+TGG | + | chr4.4:21328326-21328345 | None:intergenic | 45.0% | |
| AATGATCCCAAGTCTCACGA+AGG | - | chr4.4:21327030-21327049 | MS.gene053571:intron | 45.0% | |
| ACCTTGTCAGGCAGATATGA+TGG | + | chr4.4:21328766-21328785 | None:intergenic | 45.0% | |
| ACGACACATACACCAAACAC+CGG | - | chr4.4:21325667-21325686 | MS.gene053571:CDS | 45.0% | |
| AGACACTAACGACTCTCACT+CGG | - | chr4.4:21328985-21329004 | MS.gene053571:intron | 45.0% | |
| AGGTAGAGTTTGACGCTGAT+GGG | - | chr4.4:21328680-21328699 | MS.gene053571:intron | 45.0% | |
| AGTGGTCTTCTCTCTGTTGA+TGG | - | chr4.4:21325483-21325502 | MS.gene053571:intron | 45.0% | |
| AGTTCCAGCAACAGATGTTG+AGG | - | chr4.4:21326927-21326946 | MS.gene053571:intron | 45.0% | |
| ATCAAGTCCTTCGTGAGACT+TGG | + | chr4.4:21327040-21327059 | None:intergenic | 45.0% | |
| ATTCTGCCACAGAAGCAACT+TGG | - | chr4.4:21329016-21329035 | MS.gene053571:CDS | 45.0% | |
| CAACAGAGAGAAGACCACTA+AGG | + | chr4.4:21325482-21325501 | None:intergenic | 45.0% | |
| CACTAAGGATGCATTCCTTG+AGG | + | chr4.4:21325467-21325486 | None:intergenic | 45.0% | |
| CTCAAGGAATGCATCCTTAG+TGG | - | chr4.4:21325465-21325484 | MS.gene053571:intron | 45.0% | |
| CTGAACCACATCTTTCACTG+TGG | + | chr4.4:21329481-21329500 | None:intergenic | 45.0% | |
| CTGTCCACAAAATCCTTAGC+TGG | + | chr4.4:21327557-21327576 | None:intergenic | 45.0% | |
| GACAAGCTACCAGAGGAATT+GGG | - | chr4.4:21326296-21326315 | MS.gene053571:intron | 45.0% | |
| GAGCATAAGAGCAGCAGAAA+AGG | + | chr4.4:21329146-21329165 | None:intergenic | 45.0% | |
| TAGGTAGAGTTTGACGCTGA+TGG | - | chr4.4:21328679-21328698 | MS.gene053571:intron | 45.0% | |
| TATGATGGCCAATGGAGCTT+TGG | - | chr4.4:21326686-21326705 | MS.gene053571:CDS | 45.0% | |
| TCAAGTCCTTCGTGAGACTT+GGG | + | chr4.4:21327039-21327058 | None:intergenic | 45.0% | |
| TCCATCATATCTGCCTGACA+AGG | - | chr4.4:21328762-21328781 | MS.gene053571:intron | 45.0% | |
| TGACAAGCTACCAGAGGAAT+TGG | - | chr4.4:21326295-21326314 | MS.gene053571:intron | 45.0% | |
| TGTGTGTGTCTGACACCTAT+CGG | + | chr4.4:21325765-21325784 | None:intergenic | 45.0% | |
| TTACGACCAAGTTGCTTCTG+TGG | + | chr4.4:21329025-21329044 | None:intergenic | 45.0% | |
| ! | CGTTAGTGTCTGGAATAGGA+TGG | + | chr4.4:21328976-21328995 | None:intergenic | 45.0% |
| ! | GAGTCGTTAGTGTCTGGAAT+AGG | + | chr4.4:21328980-21328999 | None:intergenic | 45.0% |
| ! | GGCACTGAAGTCACCTTTAA+TGG | - | chr4.4:21326948-21326967 | MS.gene053571:intron | 45.0% |
| ! | GGTAAATCAGGTGTTGCACA+TGG | - | chr4.4:21326094-21326113 | MS.gene053571:intron | 45.0% |
| ! | TCAGCTGTCTTGCTGTAACT+TGG | + | chr4.4:21327068-21327087 | None:intergenic | 45.0% |
| ! | TTTGGTGTATGTGTCGTGTC+TGG | + | chr4.4:21325664-21325683 | None:intergenic | 45.0% |
| !! | CACAAACCGATTAGCTTGTG+TGG | + | chr4.4:21329101-21329120 | None:intergenic | 45.0% |
| !! | TATCGGTGTTAGAGACCGAT+AGG | - | chr4.4:21325747-21325766 | MS.gene053571:intron | 45.0% |
| !! | ACAATTATATTAAATTTAAA+AGG | + | chr4.4:21328375-21328394 | None:intergenic | 5.0% |
| AACCTCCTTGAAAACGTGCG+AGG | + | chr4.4:21328289-21328308 | None:intergenic | 50.0% | |
| AAGCCTGGAATCGATCTCCT+TGG | - | chr4.4:21329243-21329262 | MS.gene053571:intron | 50.0% | |
| ACCTCCTTGAAAACGTGCGA+GGG | + | chr4.4:21328288-21328307 | None:intergenic | 50.0% | |
| AGTGCCTCAACATCTGTTGC+TGG | + | chr4.4:21326934-21326953 | None:intergenic | 50.0% | |
| ATGTTTGACACATCCTGCCG+TGG | + | chr4.4:21327932-21327951 | None:intergenic | 50.0% | |
| CACACGAACCAAAGCTCCAT+TGG | + | chr4.4:21326697-21326716 | None:intergenic | 50.0% | |
| GAGTGAGAGTCGTTAGTGTC+TGG | + | chr4.4:21328986-21329005 | None:intergenic | 50.0% | |
| GATGTAATTGTCCTCGGCAC+TGG | - | chr4.4:21325441-21325460 | MS.gene053571:CDS | 50.0% | |
| GCTCACAATGTAGCTCCCAA+AGG | - | chr4.4:21329162-21329181 | MS.gene053571:intron | 50.0% | |
| GCTTCAATTCCACCTGAGGT+TGG | + | chr4.4:21329227-21329246 | None:intergenic | 50.0% | |
| TTGGTCAGTCTCAGCTTCTG+TGG | + | chr4.4:21329208-21329227 | None:intergenic | 50.0% | |
| ! | AGATCTCATCGACTGGTCCA+AGG | + | chr4.4:21329263-21329282 | None:intergenic | 50.0% |
| ! | GAATCCCTCGCACGTTTTCA+AGG | - | chr4.4:21328281-21328300 | MS.gene053571:intron | 50.0% |
| ! | TCCATCTGAAGTCACACCGA+TGG | + | chr4.4:21328710-21328729 | None:intergenic | 50.0% |
| ! | TGTGGGATCATAGCTCTGCA+AGG | + | chr4.4:21329445-21329464 | None:intergenic | 50.0% |
| AGCTGAGACTGACCAACCTC+AGG | - | chr4.4:21329212-21329231 | MS.gene053571:intron | 55.0% | |
| AGTTACCAACCTACCACGGC+AGG | - | chr4.4:21327916-21327935 | MS.gene053571:intron | 55.0% | |
| CCAGGCTTCAATTCCACCTG+AGG | + | chr4.4:21329231-21329250 | None:intergenic | 55.0% | |
| CCTCAGGTGGAATTGAAGCC+TGG | - | chr4.4:21329228-21329247 | MS.gene053571:intron | 55.0% | |
| GACGCTGATGGGAAAGCCAT+CGG | - | chr4.4:21328691-21328710 | MS.gene053571:intron | 55.0% | |
| GCCATCGGTGTGACTTCAGA+TGG | - | chr4.4:21328706-21328725 | MS.gene053571:intron | 55.0% | |
| GGGAGATGACAAGCTACCAG+AGG | - | chr4.4:21326289-21326308 | MS.gene053571:intron | 55.0% | |
| GGTTTGAAGGACGCTTGCAG+TGG | - | chr4.4:21327629-21327648 | MS.gene053571:CDS | 55.0% | |
| TGAGACTGACCAACCTCAGG+TGG | - | chr4.4:21329215-21329234 | MS.gene053571:intron | 55.0% | |
| TTGACACATCCTGCCGTGGT+AGG | + | chr4.4:21327928-21327947 | None:intergenic | 55.0% | |
| ! | CGGTTGAGTGCTGTGTATGG+TGG | - | chr4.4:21328437-21328456 | MS.gene053571:CDS | 55.0% |
| ! | GCTCGGTTGAGTGCTGTGTA+TGG | - | chr4.4:21328434-21328453 | MS.gene053571:CDS | 55.0% |
| ! | GGTCCAAGGAGATCGATTCC+AGG | + | chr4.4:21329249-21329268 | None:intergenic | 55.0% |
| ! | TGGGTCTGTTTGAGAAGCGC+CGG | - | chr4.4:21326968-21326987 | MS.gene053571:intron | 55.0% |
| !! | TCCCTCGCACGTTTTCAAGG+AGG | - | chr4.4:21328284-21328303 | MS.gene053571:intron | 55.0% |
| ATTCCTTGAGGCCAGTGCCG+AGG | + | chr4.4:21325455-21325474 | None:intergenic | 60.0% | |
| CACATCCTGCCGTGGTAGGT+TGG | + | chr4.4:21327924-21327943 | None:intergenic | 60.0% | |
| CGGCTAGAGCCCAATTCCTC+TGG | + | chr4.4:21326308-21326327 | None:intergenic | 60.0% | |
| CTGCAGCACTTGCAGCACTC+AGG | + | chr4.4:21329715-21329734 | None:intergenic | 60.0% | |
| ! | TGGACTGGGAGAGTTGCCTC+AGG | - | chr4.4:21328331-21328350 | MS.gene053571:intron | 60.0% |
| !! | GGGTCTGTTTGAGAAGCGCC+GGG | - | chr4.4:21326969-21326988 | MS.gene053571:intron | 60.0% |
| !! | TGTTTGAGAAGCGCCGGGCT+CGG | - | chr4.4:21326974-21326993 | MS.gene053571:intron | 60.0% |
| !! | TGTCCTCGGCACTGGCCTCA+AGG | - | chr4.4:21325449-21325468 | MS.gene053571:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 21325426 | 21329745 | 21325426 | ID=MS.gene053571 |
| chr4.4 | mRNA | 21325426 | 21329745 | 21325426 | ID=MS.gene053571.t1;Parent=MS.gene053571 |
| chr4.4 | exon | 21329659 | 21329745 | 21329659 | ID=MS.gene053571.t1.exon1;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21329659 | 21329745 | 21329659 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21329005 | 21329067 | 21329005 | ID=MS.gene053571.t1.exon2;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21329005 | 21329067 | 21329005 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21328816 | 21328899 | 21328816 | ID=MS.gene053571.t1.exon3;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21328816 | 21328899 | 21328816 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21328380 | 21328487 | 21328380 | ID=MS.gene053571.t1.exon4;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21328380 | 21328487 | 21328380 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21328080 | 21328252 | 21328080 | ID=MS.gene053571.t1.exon5;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21328080 | 21328252 | 21328080 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21327588 | 21327699 | 21327588 | ID=MS.gene053571.t1.exon6;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21327588 | 21327699 | 21327588 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21326819 | 21326899 | 21326819 | ID=MS.gene053571.t1.exon7;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21326819 | 21326899 | 21326819 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21326681 | 21326743 | 21326681 | ID=MS.gene053571.t1.exon8;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21326681 | 21326743 | 21326681 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21326388 | 21326489 | 21326388 | ID=MS.gene053571.t1.exon9;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21326388 | 21326489 | 21326388 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21326118 | 21326242 | 21326118 | ID=MS.gene053571.t1.exon10;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21326118 | 21326242 | 21326118 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21325821 | 21326031 | 21325821 | ID=MS.gene053571.t1.exon11;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21325821 | 21326031 | 21325821 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21325647 | 21325721 | 21325647 | ID=MS.gene053571.t1.exon12;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21325647 | 21325721 | 21325647 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| chr4.4 | exon | 21325426 | 21325479 | 21325426 | ID=MS.gene053571.t1.exon13;Parent=MS.gene053571.t1 |
| chr4.4 | CDS | 21325426 | 21325479 | 21325426 | ID=cds.MS.gene053571.t1;Parent=MS.gene053571.t1 |
| Gene Sequence |
| Protein sequence |
