AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02877

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02877.t1 MTR_2g027660 100.000 211 0 0 1 211 1 211 7.47e-160 440
MS.gene02877.t1 MTR_6g021790 88.626 211 24 0 1 211 1 211 5.84e-140 390
MS.gene02877.t1 MTR_8g031680 68.720 211 65 1 1 211 1 210 5.91e-105 301
MS.gene02877.t1 MTR_8g031660 66.351 211 66 1 1 211 1 206 3.48e-104 299
MS.gene02877.t1 MTR_8g031870 78.049 164 36 0 1 164 1 164 6.10e-95 275
MS.gene02877.t1 MTR_8g031830 64.019 214 58 3 1 211 1 198 1.53e-94 274
MS.gene02877.t1 MTR_2g014990 48.095 210 105 2 3 211 10 216 2.54e-66 203
MS.gene02877.t1 MTR_4g088090 47.619 210 106 2 3 211 10 216 1.95e-65 201
MS.gene02877.t1 MTR_2g005510 53.073 179 84 0 3 181 12 190 1.31e-64 199
MS.gene02877.t1 MTR_4g079350 47.143 210 107 2 3 211 10 216 1.94e-64 199
MS.gene02877.t1 MTR_2g075950 46.479 213 104 2 3 211 10 216 2.58e-64 198
MS.gene02877.t1 MTR_1g052475 50.000 178 89 0 5 182 14 191 9.88e-64 197
MS.gene02877.t1 MTR_2g083860 55.621 169 75 0 3 171 10 178 2.48e-63 196
MS.gene02877.t1 MTR_0262s0050 53.333 165 77 0 5 169 14 178 4.85e-63 195
MS.gene02877.t1 MTR_2g090865 46.009 213 104 2 3 211 8 213 1.26e-61 191
MS.gene02877.t1 MTR_7g081700 45.933 209 101 1 3 211 5 201 3.27e-61 190
MS.gene02877.t1 MTR_4g064897 45.755 212 106 3 3 211 9 214 6.11e-61 189
MS.gene02877.t1 MTR_1g115325 46.890 209 104 3 3 210 12 214 6.89e-61 189
MS.gene02877.t1 MTR_8g089985 44.444 216 102 4 5 210 16 223 8.33e-61 189
MS.gene02877.t1 MTR_3g069510 46.226 212 106 2 3 211 9 215 9.43e-61 189
MS.gene02877.t1 MTR_3g086980 46.193 197 101 2 5 196 15 211 2.33e-60 188
MS.gene02877.t1 MTR_7g405790 43.541 209 114 2 5 211 14 220 5.86e-59 185
MS.gene02877.t1 MTR_7g100020 49.733 187 91 2 3 188 12 196 6.58e-59 184
MS.gene02877.t1 MTR_1g068740 45.455 209 107 4 3 210 12 214 7.75e-59 184
MS.gene02877.t1 MTR_8g006970 53.333 165 77 0 3 167 5 169 1.26e-58 182
MS.gene02877.t1 MTR_1g068730 44.976 209 108 4 3 210 12 214 2.83e-58 183
MS.gene02877.t1 MTR_8g006970 46.377 207 100 2 5 211 21 216 4.27e-58 182
MS.gene02877.t1 MTR_2g005500 50.296 169 84 0 3 171 6 174 5.15e-58 182
MS.gene02877.t1 MTR_8g036220 51.829 164 79 0 5 168 15 178 6.79e-58 182
MS.gene02877.t1 MTR_7g051940 44.928 207 111 1 5 211 12 215 1.09e-57 181
MS.gene02877.t1 MTR_8g027220 53.165 158 74 0 5 162 25 182 7.36e-57 180
MS.gene02877.t1 MTR_6g079550 45.894 207 110 1 5 211 11 215 5.01e-56 177
MS.gene02877.t1 MTR_1g078200 43.128 211 116 1 5 211 13 223 7.12e-56 177
MS.gene02877.t1 MTR_4g063160 45.024 211 106 4 3 210 12 215 8.83e-56 176
MS.gene02877.t1 MTR_8g107070 48.223 197 93 2 5 200 13 201 3.37e-52 169
MS.gene02877.t1 MTR_2g096550 45.714 175 93 2 2 174 11 185 4.55e-51 164
MS.gene02877.t1 MTR_7g103070 45.455 209 99 6 7 211 17 214 3.00e-50 162
MS.gene02877.t1 MTR_8g093740 42.925 212 104 6 3 210 10 208 5.03e-50 162
MS.gene02877.t1 MTR_1g029450 42.925 212 107 6 3 211 14 214 9.73e-49 159
MS.gene02877.t1 MTR_3g096350 49.375 160 78 3 3 160 9 167 2.32e-48 157
MS.gene02877.t1 MTR_8g031810 67.890 109 21 1 1 109 1 95 2.60e-48 153
MS.gene02877.t1 MTR_8g103550 43.210 162 92 0 8 169 11 172 7.62e-48 155
MS.gene02877.t1 MTR_7g117910 50.704 142 70 0 5 146 19 160 5.03e-47 154
MS.gene02877.t1 MTR_3g064390 43.312 157 89 0 8 164 12 168 1.04e-46 153
MS.gene02877.t1 MTR_2g102060 43.791 153 86 0 8 160 12 164 1.18e-46 153
MS.gene02877.t1 MTR_4g099470 43.678 174 86 1 38 211 16 177 1.38e-46 152
MS.gene02877.t1 MTR_5g076590 42.500 160 92 0 8 167 12 171 3.56e-46 151
MS.gene02877.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 3.96e-46 151
MS.gene02877.t1 MTR_1g094220 41.772 158 91 1 8 164 33 190 4.16e-46 151
MS.gene02877.t1 MTR_1g090717 49.693 163 77 4 2 160 11 172 5.70e-46 151
MS.gene02877.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 8.17e-46 151
MS.gene02877.t1 MTR_1g062760 48.235 170 83 4 3 169 11 178 1.42e-45 150
MS.gene02877.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 1.74e-45 151
MS.gene02877.t1 MTR_1g068730 53.543 127 59 0 3 129 12 138 6.71e-45 147
MS.gene02877.t1 MTR_1g068740 53.543 127 59 0 3 129 12 138 8.53e-45 148
MS.gene02877.t1 MTR_4g098950 34.286 210 119 2 7 210 10 206 6.00e-44 146
MS.gene02877.t1 MTR_8g090215 38.509 161 99 0 7 167 10 170 4.01e-43 144
MS.gene02877.t1 MTR_3g087160 35.912 181 111 1 7 182 10 190 9.78e-43 143
MS.gene02877.t1 MTR_5g013900 36.264 182 110 1 7 182 10 191 3.93e-42 141
MS.gene02877.t1 MTR_8g093740 41.243 177 88 5 38 210 11 175 1.18e-37 129
MS.gene02877.t1 MTR_3g096350 45.578 147 77 3 3 147 9 154 3.46e-37 127
MS.gene02877.t1 MTR_7g103070 42.353 170 81 4 47 211 1 158 1.60e-36 125
MS.gene02877.t1 MTR_3g096350 50.820 122 57 3 3 122 9 129 2.07e-36 125
MS.gene02877.t1 MTR_4g069850 36.683 199 116 4 6 197 8 203 2.88e-34 121
MS.gene02877.t1 MTR_8g092020 37.952 166 96 2 6 164 12 177 6.68e-34 120
MS.gene02877.t1 MTR_3g064390 40.800 125 74 0 8 132 12 136 1.20e-33 118
MS.gene02877.t1 MTR_1g097420 34.597 211 118 6 6 209 8 205 3.21e-33 119
MS.gene02877.t1 MTR_6g039490 38.095 168 97 3 6 166 8 175 1.10e-31 115
MS.gene02877.t1 MTR_2g101890 37.654 162 94 3 6 160 10 171 1.92e-31 114
MS.gene02877.t1 MTR_4g012940 37.654 162 94 3 6 160 8 169 5.28e-31 113
MS.gene02877.t1 MTR_2g005500 35.503 169 69 1 3 171 6 134 4.13e-29 107
MS.gene02877.t1 MTR_1g097420 33.333 210 118 7 7 209 38 232 4.84e-28 106
MS.gene02877.t1 MTR_2g090875 31.977 172 103 5 1 160 1 170 4.68e-25 97.4
MS.gene02877.t1 MTR_6g087980 32.558 172 102 5 1 160 1 170 4.54e-24 95.1
MS.gene02877.t1 MTR_4g088055 31.395 172 104 5 1 160 1 170 7.80e-24 94.0
MS.gene02877.t1 MTR_4g073250 32.558 172 102 6 1 160 1 170 1.99e-22 90.5
MS.gene02877.t1 MTR_3g078260 30.168 179 111 5 6 172 8 184 1.55e-21 88.6
MS.gene02877.t1 MTR_3g107707 31.646 158 105 2 7 164 14 168 3.65e-21 87.8
MS.gene02877.t1 MTR_3g107717 31.646 158 105 2 7 164 14 168 3.80e-21 87.8
MS.gene02877.t1 MTR_3g107713 31.646 158 105 2 7 164 14 168 4.27e-21 87.4
MS.gene02877.t1 MTR_8g075240 28.488 172 109 5 1 160 1 170 1.14e-20 85.9
MS.gene02877.t1 MTR_5g022600 27.907 172 110 5 1 160 1 170 5.94e-20 84.0
MS.gene02877.t1 MTR_1452s0010 38.043 92 57 0 26 117 1 92 7.96e-18 75.9
MS.gene02877.t1 MTR_1686s0010 35.870 92 59 0 26 117 1 92 1.04e-16 72.8
MS.gene02877.t1 MTR_2g078000 45.902 61 28 1 68 128 47 102 2.87e-14 66.6
MS.gene02877.t1 MTR_4g113620 27.329 161 105 3 7 167 14 162 3.56e-14 68.9
MS.gene02877.t1 MTR_3g078260 29.310 116 79 3 6 120 8 121 1.03e-13 66.2
MS.gene02877.t1 MTR_1g069245 45.333 75 40 1 38 112 125 198 1.57e-13 67.4
MS.gene02877.t1 MTR_1g059590 32.075 159 98 5 2 160 427 575 4.03e-12 65.1
MS.gene02877.t1 MTR_1g059590 32.075 159 98 5 2 160 394 542 4.04e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02877.t1 AT4G17170 97.143 210 6 0 1 210 1 210 7.64e-155 427
MS.gene02877.t1 AT4G35860 85.238 210 31 0 1 210 1 210 1.25e-136 381
MS.gene02877.t1 AT4G17160 78.673 211 37 2 1 210 1 204 8.15e-121 341
MS.gene02877.t1 AT4G35860 81.707 164 30 0 47 210 1 164 1.50e-100 288
MS.gene02877.t1 AT5G45750 46.479 213 103 2 3 211 10 215 7.10e-66 202
MS.gene02877.t1 AT5G60860 48.095 210 105 2 3 211 10 216 8.82e-66 202
MS.gene02877.t1 AT3G12160 47.393 211 101 2 5 210 14 219 2.30e-64 199
MS.gene02877.t1 AT4G18430 48.095 210 105 2 3 211 10 216 3.63e-64 198
MS.gene02877.t1 AT3G15060 47.368 209 108 1 3 211 10 216 7.95e-64 197
MS.gene02877.t1 AT2G33870 47.664 214 101 3 3 211 10 217 1.28e-63 196
MS.gene02877.t1 AT5G47960 48.077 208 105 2 5 210 14 220 3.99e-63 196
MS.gene02877.t1 AT1G28550 47.664 214 101 3 3 211 10 217 4.34e-63 195
MS.gene02877.t1 AT1G06400 47.418 213 101 2 3 211 10 215 1.64e-62 194
MS.gene02877.t1 AT4G39990 46.698 212 103 3 5 211 16 222 2.25e-62 194
MS.gene02877.t1 AT1G07410 45.755 212 105 2 3 211 9 213 3.31e-62 193
MS.gene02877.t1 AT4G18800 45.972 211 105 2 3 211 10 213 4.64e-62 192
MS.gene02877.t1 AT1G16920 53.293 167 78 0 3 169 10 176 7.72e-62 192
MS.gene02877.t1 AT1G02130 45.933 209 102 1 3 211 5 202 1.22e-61 191
MS.gene02877.t1 AT4G17530 46.411 209 100 2 3 211 5 201 1.45e-61 191
MS.gene02877.t1 AT1G09630 45.455 209 112 1 3 211 9 215 3.11e-61 191
MS.gene02877.t1 AT5G65270 46.479 213 106 3 5 211 16 226 1.00e-60 189
MS.gene02877.t1 AT3G46830 53.846 169 78 0 3 171 9 177 1.04e-60 189
MS.gene02877.t1 AT3G46830 53.846 169 78 0 3 171 9 177 1.04e-60 189
MS.gene02877.t1 AT5G59150 45.755 212 108 2 3 211 9 216 7.23e-60 187
MS.gene02877.t1 AT3G11730 47.847 209 98 3 3 210 5 203 8.13e-60 186
MS.gene02877.t1 AT5G47200 45.933 209 101 2 3 211 5 201 8.43e-60 186
MS.gene02877.t1 AT3G09900 45.714 210 108 3 3 211 12 216 9.41e-59 184
MS.gene02877.t1 AT5G59840 46.411 209 105 3 3 210 12 214 2.36e-58 183
MS.gene02877.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene02877.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene02877.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene02877.t1 AT2G43130 45.411 207 109 2 5 211 11 213 3.11e-58 183
MS.gene02877.t1 AT5G03520 45.714 210 106 3 3 211 12 214 3.89e-58 182
MS.gene02877.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene02877.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene02877.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene02877.t1 AT5G47520 46.047 215 101 3 5 211 13 220 1.03e-56 179
MS.gene02877.t1 AT3G07410 43.961 207 115 1 5 211 11 216 1.60e-56 178
MS.gene02877.t1 AT1G05810 42.788 208 116 2 5 211 11 216 3.28e-56 178
MS.gene02877.t1 AT2G31680 44.019 209 113 2 5 211 11 217 4.48e-56 177
MS.gene02877.t1 AT1G05810 42.788 208 116 2 5 211 57 262 8.57e-56 178
MS.gene02877.t1 AT1G18200 47.668 193 94 1 5 190 12 204 3.64e-55 176
MS.gene02877.t1 AT1G73640 51.497 167 81 0 5 171 12 178 2.09e-54 174
MS.gene02877.t1 AT1G01200 49.405 168 84 1 5 171 27 194 6.52e-54 172
MS.gene02877.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene02877.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene02877.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene02877.t1 AT5G45130 38.235 204 111 3 8 211 12 200 1.07e-46 153
MS.gene02877.t1 AT5G03530 49.123 171 80 4 3 169 10 177 1.52e-46 153
MS.gene02877.t1 AT5G03530 49.123 171 80 4 3 169 10 177 1.52e-46 153
MS.gene02877.t1 AT4G19640 42.675 157 90 0 8 164 12 168 4.44e-46 151
MS.gene02877.t1 AT5G45130 38.119 202 110 4 10 211 22 208 6.89e-46 151
MS.gene02877.t1 AT3G54840 41.558 154 89 1 8 160 35 188 1.49e-44 147
MS.gene02877.t1 AT3G54840 41.558 154 89 1 8 160 35 188 1.73e-44 147
MS.gene02877.t1 AT3G54840 41.447 152 88 1 10 160 3 154 2.94e-44 145
MS.gene02877.t1 AT5G59150 44.910 167 85 2 48 211 3 165 9.63e-44 144
MS.gene02877.t1 AT4G39890 40.123 162 96 1 7 167 10 171 1.12e-43 145
MS.gene02877.t1 AT5G10260 38.509 161 99 0 7 167 10 170 1.41e-43 145
MS.gene02877.t1 AT5G03520 43.023 172 90 3 41 211 40 204 2.59e-43 144
MS.gene02877.t1 AT2G22290 37.267 161 101 0 7 167 10 170 2.25e-41 139
MS.gene02877.t1 AT2G44610 34.615 182 113 1 7 182 10 191 1.90e-40 137
MS.gene02877.t1 AT5G64990 37.888 161 100 0 7 167 8 168 3.40e-40 136
MS.gene02877.t1 AT3G09910 43.429 175 92 4 3 173 10 181 1.39e-38 132
MS.gene02877.t1 AT3G09910 43.429 175 92 4 3 173 10 181 1.39e-38 132
MS.gene02877.t1 AT5G64990 36.310 168 100 1 7 167 8 175 2.03e-37 129
MS.gene02877.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene02877.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene02877.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene02877.t1 AT3G18820 40.123 162 90 3 6 160 8 169 2.54e-34 121
MS.gene02877.t1 AT2G21880 39.157 166 94 3 6 164 9 174 9.48e-34 120
MS.gene02877.t1 AT1G22740 37.423 163 95 3 6 161 8 170 3.37e-33 118
MS.gene02877.t1 AT4G09720 38.690 168 96 3 6 166 8 175 3.80e-33 118
MS.gene02877.t1 AT5G39620 38.182 165 95 3 7 164 6 170 4.88e-33 118
MS.gene02877.t1 AT4G19640 38.583 127 78 0 8 134 12 138 8.35e-33 115
MS.gene02877.t1 AT1G52280 38.889 162 92 3 6 160 8 169 1.02e-32 117
MS.gene02877.t1 AT1G49300 38.650 163 93 3 6 161 8 170 1.08e-32 117
MS.gene02877.t1 AT1G49300 38.650 163 93 3 6 161 8 170 1.08e-32 117
MS.gene02877.t1 AT4G19640 38.168 131 81 0 8 138 12 142 1.35e-32 116
MS.gene02877.t1 AT4G09720 38.728 173 94 4 6 166 8 180 4.16e-32 116
MS.gene02877.t1 AT4G09720 37.430 179 94 4 6 166 8 186 3.74e-31 114
MS.gene02877.t1 AT3G16100 37.654 162 94 3 6 160 8 169 6.06e-31 112
MS.gene02877.t1 AT2G21880 37.415 147 85 3 25 164 3 149 1.58e-25 98.2
MS.gene02877.t1 AT2G21880 37.415 147 85 3 25 164 3 149 1.58e-25 98.2
MS.gene02877.t1 AT5G46025 44.340 106 58 1 67 171 5 110 7.51e-25 94.4
MS.gene02877.t1 AT2G21880 34.337 166 94 4 6 164 9 166 5.14e-24 94.7
MS.gene02877.t1 AT4G28950 31.765 170 104 5 1 160 1 168 6.67e-24 94.7
MS.gene02877.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene02877.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene02877.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene02877.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene02877.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene02877.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene02877.t1 AT1G75840 30.814 172 105 5 1 160 1 170 5.16e-23 92.0
MS.gene02877.t1 AT5G45970 30.814 172 105 5 1 160 1 170 1.02e-22 91.3
MS.gene02877.t1 AT2G44690 31.737 167 100 5 6 160 18 182 2.37e-22 90.5
MS.gene02877.t1 AT1G20090 29.940 167 103 5 6 160 5 169 5.98e-22 89.4
MS.gene02877.t1 AT5G20020 31.646 158 105 2 7 164 14 168 3.33e-21 87.8
MS.gene02877.t1 AT5G55190 31.646 158 105 2 7 164 14 168 4.20e-21 87.8
MS.gene02877.t1 AT5G20010 31.646 158 105 2 7 164 14 168 4.33e-21 87.4
MS.gene02877.t1 AT3G51300 28.488 172 109 5 1 160 1 170 8.63e-21 86.3
MS.gene02877.t1 AT3G48040 30.409 171 105 5 2 160 4 172 1.15e-20 86.3
MS.gene02877.t1 AT5G55080 30.435 161 109 2 7 167 14 171 2.43e-20 85.5
MS.gene02877.t1 AT2G17800 28.488 172 109 5 1 160 1 170 6.91e-20 84.0
MS.gene02877.t1 AT2G17800 28.488 172 109 5 1 160 1 170 6.91e-20 84.0
MS.gene02877.t1 AT5G62880 29.825 171 106 5 2 160 4 172 8.51e-20 84.0
MS.gene02877.t1 AT4G35950 27.907 172 110 5 1 160 1 170 3.37e-19 82.0
MS.gene02877.t1 AT5G62880 29.518 166 103 5 6 159 8 171 4.47e-18 79.0
MS.gene02877.t1 AT3G48040 29.814 161 99 5 6 154 8 166 6.52e-18 78.2
MS.gene02877.t1 AT4G35020 33.058 121 78 3 1 120 1 119 5.62e-16 72.4
MS.gene02877.t1 AT4G35020 33.058 121 78 3 1 120 1 119 5.62e-16 72.4
MS.gene02877.t1 AT4G08190 48.438 64 30 1 97 160 67 127 3.45e-12 61.6
MS.gene02877.t1 AT3G51290 26.400 125 79 4 48 160 648 771 8.31e-11 61.2

Find 53 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCAATCAAGTTGCAAATA+TGG 0.213769 2.4:-61481569 MS.gene02877:CDS
TTCATATGCTTGCAGTCTTA+TGG 0.237130 2.4:-61479072 MS.gene02877:intron
TTGACCATCGGTGTTGAATT+TGG 0.325534 2.4:-61481618 MS.gene02877:CDS
GTAGGATATGGTGGAATTCC+TGG 0.331205 2.4:-61479042 MS.gene02877:CDS
TACATCATCATCGGCGATAC+TGG 0.349931 2.4:-61482349 MS.gene02877:intron
TCCCATATTTGCAACTTGAT+TGG 0.374477 2.4:+61481567 None:intergenic
GGACCTTCTGCTGCGGGTGG+AGG 0.381621 2.4:-61479000 MS.gene02877:CDS
GGTGGAATTCCTGGACCATC+TGG 0.390111 2.4:-61479033 MS.gene02877:CDS
GGAGAACGGGTTGATCTTCA+TGG 0.402006 2.4:-61479574 MS.gene02877:CDS
GCCAATCAAGTTGCAAATAT+GGG 0.406809 2.4:-61481568 MS.gene02877:CDS
AACAGTTTGCAAAGGAGAAC+GGG 0.430066 2.4:-61479587 MS.gene02877:CDS
TATTATCAATCGTGATCATC+CGG 0.441090 2.4:+61481592 None:intergenic
TATGGAATAAAAGTAGGATA+TGG 0.443999 2.4:-61479054 MS.gene02877:CDS
CATTTAATCACTTAGCTAGC+TGG 0.445587 2.4:-61479713 MS.gene02877:CDS
AGGGATGGACCTTCTGCTGC+GGG 0.454453 2.4:-61479006 MS.gene02877:CDS
AACGGGTTGAAAGCGCTTGT+CGG 0.488058 2.4:+61481647 None:intergenic
CCGATGGTCAAGTCATGAAC+GGG 0.494454 2.4:+61481630 None:intergenic
GTTGATCTTCATGGAGGCCT+CGG 0.495654 2.4:-61479565 MS.gene02877:CDS
AATATGACAATTATGCTGAT+TGG 0.496339 2.4:-61479660 MS.gene02877:CDS
TCATATTACAGAGGGGCTGC+AGG 0.497225 2.4:-61480439 MS.gene02877:CDS
GGAATAAAAGTAGGATATGG+TGG 0.505694 2.4:-61479051 MS.gene02877:CDS
CAGTCTTATGGAATAAAAGT+AGG 0.507290 2.4:-61479060 MS.gene02877:CDS
TCCTGGACCATCTGGAGGTA+GGG 0.509121 2.4:-61479025 MS.gene02877:CDS
CAGCCTCCACCCGCAGCAGA+AGG 0.513447 2.4:+61478997 None:intergenic
GATGGACCTTCTGCTGCGGG+TGG 0.534861 2.4:-61479003 MS.gene02877:CDS
GAACAGTTTGCAAAGGAGAA+CGG 0.544908 2.4:-61479588 MS.gene02877:CDS
AACTGCTCAGAATGTTGAAG+AGG 0.551651 2.4:-61479538 MS.gene02877:intron
CTCTTCAAATACATCATCAT+CGG 0.552415 2.4:-61482358 MS.gene02877:CDS
TGACCTTGTGATAGATCTGA+AGG 0.556542 2.4:+61480459 None:intergenic
GGACCATCTGGAGGTAGGGA+TGG 0.558951 2.4:-61479021 MS.gene02877:CDS
TCCCTACCTCCAGATGGTCC+AGG 0.559719 2.4:+61479024 None:intergenic
TAATCACTTAGCTAGCTGGT+TGG 0.562132 2.4:-61479709 MS.gene02877:CDS
GTGTGATCTTGCTCACAGAC+GGG 0.563085 2.4:-61479631 MS.gene02877:CDS
CCCGTTCATGACTTGACCAT+CGG 0.566895 2.4:-61481630 MS.gene02877:CDS
TGCTTGTTTATGATATAACC+AGG 0.573499 2.4:-61480411 MS.gene02877:intron
TCGGTGTTGAATTTGGTGCC+CGG 0.576405 2.4:-61481611 MS.gene02877:CDS
TCACAAGGTCATATTACAGA+GGG 0.579518 2.4:-61480447 MS.gene02877:CDS
CGATGATGATGTATTTGAAG+AGG 0.579909 2.4:+61482359 None:intergenic
ATTATCAATCGTGATCATCC+GGG 0.581341 2.4:+61481593 None:intergenic
ACCGATGGTCAAGTCATGAA+CGG 0.581870 2.4:+61481629 None:intergenic
CGGGCTGTAAGCACAGAAGA+AGG 0.584016 2.4:-61479612 MS.gene02877:CDS
AGTGTGATCTTGCTCACAGA+CGG 0.590726 2.4:-61479632 MS.gene02877:CDS
AGAAGGTGAACAGTTTGCAA+AGG 0.595205 2.4:-61479595 MS.gene02877:CDS
TTCCTGGACCATCTGGAGGT+AGG 0.607438 2.4:-61479026 MS.gene02877:CDS
TAGGGATGGACCTTCTGCTG+CGG 0.608244 2.4:-61479007 MS.gene02877:CDS
CTAGCTGGTTGGAAGATGCA+AGG 0.612086 2.4:-61479698 MS.gene02877:CDS
GGCACCAAATTCAACACCGA+TGG 0.616278 2.4:+61481614 None:intergenic
GGAATTCCTGGACCATCTGG+AGG 0.651030 2.4:-61479030 MS.gene02877:CDS
GGTCCATCCCTACCTCCAGA+TGG 0.660882 2.4:+61479018 None:intergenic
ATCACAAGGTCATATTACAG+AGG 0.688361 2.4:-61480448 MS.gene02877:CDS
AATCCTTCAGATCTATCACA+AGG 0.690302 2.4:-61480462 MS.gene02877:CDS
CACAAGGTCATATTACAGAG+GGG 0.730372 2.4:-61480446 MS.gene02877:CDS
GAACGGGTTGATCTTCATGG+AGG 0.745466 2.4:-61479571 MS.gene02877:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATACATGAAATAAATTTA+TGG - chr2.4:61480395-61480414 MS.gene02877:intron 10.0%
!!! GAAAATAATTATTGTATTTT+GGG + chr2.4:61481014-61481033 None:intergenic 10.0%
!!! TGAAAATAATTATTGTATTT+TGG + chr2.4:61481015-61481034 None:intergenic 10.0%
!! AAATAAAAAGAGATTAGAAA+GGG + chr2.4:61479057-61479076 None:intergenic 15.0%
!! AGATTGTATTACAAAAATAA+AGG + chr2.4:61482158-61482177 None:intergenic 15.0%
!! TAAATAAAAAGAGATTAGAA+AGG + chr2.4:61479058-61479077 None:intergenic 15.0%
!! TAAATACAATTTCATAACTT+GGG - chr2.4:61481348-61481367 MS.gene02877:intron 15.0%
!! TACAAAATTTCAAAATAACA+AGG + chr2.4:61480239-61480258 None:intergenic 15.0%
!! TTAAATACAATTTCATAACT+TGG - chr2.4:61481347-61481366 MS.gene02877:intron 15.0%
!!! AAAGATTTTATCTAATAGAT+GGG - chr2.4:61480480-61480499 MS.gene02877:intron 15.0%
!!! AAATTATGTAGTTTAAGTTT+TGG - chr2.4:61479597-61479616 MS.gene02877:CDS 15.0%
!!! ATTTATTCATTTTTCTTTTC+AGG - chr2.4:61479144-61479163 MS.gene02877:intron 15.0%
!!! CATTATTTTTATGTAGTTTA+GGG - chr2.4:61479404-61479423 MS.gene02877:intron 15.0%
!!! TAAAGTGATAGTTTATTTTA+TGG - chr2.4:61479437-61479456 MS.gene02877:intron 15.0%
!!! TAAATGGATTATATATTAAG+TGG + chr2.4:61480302-61480321 None:intergenic 15.0%
!!! TACACAATTTTTTCAAAATA+AGG + chr2.4:61479659-61479678 None:intergenic 15.0%
!!! TCATTATTTTTATGTAGTTT+AGG - chr2.4:61479403-61479422 MS.gene02877:intron 15.0%
!!! TTATTTTGAAAAAATTGTGT+AGG - chr2.4:61479658-61479677 MS.gene02877:CDS 15.0%
!!! TTCAATAAATTGATTTTTGT+TGG + chr2.4:61481420-61481439 None:intergenic 15.0%
!!! TTTATTCATTTTTCTTTTCA+GGG - chr2.4:61479145-61479164 MS.gene02877:intron 15.0%
!! AAATGAAGAAAACAATAGAT+AGG + chr2.4:61481861-61481880 None:intergenic 20.0%
!! AATAAAAAGAGATTAGAAAG+GGG + chr2.4:61479056-61479075 None:intergenic 20.0%
!! AATACAAACTAAACGAAATA+AGG + chr2.4:61479572-61479591 None:intergenic 20.0%
!! ATCTCTGTTTATATATTAAG+TGG + chr2.4:61480692-61480711 None:intergenic 20.0%
!! TGAAACAAAACTAACAATAA+AGG + chr2.4:61479504-61479523 None:intergenic 20.0%
!!! AGTTTATTTTATGGACTAAA+TGG - chr2.4:61479446-61479465 MS.gene02877:intron 20.0%
!!! ATAGCTTTTAGATTTTTTCT+AGG - chr2.4:61481375-61481394 MS.gene02877:intron 20.0%
!!! ATATGATTTGCAAATCATTT+TGG - chr2.4:61481309-61481328 MS.gene02877:intron 20.0%
!!! ATCATTTTATGTTGATTCAT+TGG - chr2.4:61480041-61480060 MS.gene02877:intron 20.0%
!!! ATTCAATTTTGTTATTGTGA+TGG - chr2.4:61479476-61479495 MS.gene02877:intron 20.0%
!!! GAAAGATTTTATCTAATAGA+TGG - chr2.4:61480479-61480498 MS.gene02877:intron 20.0%
!!! TAGCTTTTAGATTTTTTCTA+GGG - chr2.4:61481376-61481395 MS.gene02877:intron 20.0%
!!! TGTGTTGTTTAATGTAAATA+AGG - chr2.4:61481578-61481597 MS.gene02877:CDS 20.0%
! AAAAATAATGAATAGTGCGA+TGG + chr2.4:61479394-61479413 None:intergenic 25.0%
! AAAACTAACCATTTGAAAAC+TGG + chr2.4:61480556-61480575 None:intergenic 25.0%
! AAACTAACATGAAACTACAT+AGG + chr2.4:61481556-61481575 None:intergenic 25.0%
! AACCATATACAAAAAGATTC+AGG - chr2.4:61482017-61482036 MS.gene02877:intron 25.0%
! AACCTGTTATGTATAAAATC+TGG + chr2.4:61481913-61481932 None:intergenic 25.0%
! AATATGACAATTATGCTGAT+TGG - chr2.4:61481700-61481719 MS.gene02877:intron 25.0%
! AGTATGTTGTTCCATTAAAT+TGG + chr2.4:61481506-61481525 None:intergenic 25.0%
! ATAATCATTCTATGCTGAAA+AGG + chr2.4:61480776-61480795 None:intergenic 25.0%
! ATATACAAAAAGATTCAGGA+TGG - chr2.4:61482021-61482040 MS.gene02877:intron 25.0%
! ATTAAAGAAGCAATACATTG+TGG - chr2.4:61481041-61481060 MS.gene02877:intron 25.0%
! CTCAACAATGTAAATGTAAA+TGG + chr2.4:61480318-61480337 None:intergenic 25.0%
! GAAAAATGAATAAATCCGAT+CGG + chr2.4:61479139-61479158 None:intergenic 25.0%
! GAACTTATTCACTATATTTC+AGG - chr2.4:61480866-61480885 MS.gene02877:intron 25.0%
! GATTGACTACAGAAATAAAT+AGG - chr2.4:61480580-61480599 MS.gene02877:intron 25.0%
! GTATTAGACTATAAGTTACT+CGG - chr2.4:61481109-61481128 MS.gene02877:intron 25.0%
! GTATTTACTAGTAGTTAATG+AGG - chr2.4:61479273-61479292 MS.gene02877:intron 25.0%
! TAAATAATCTCACCAAAGTT+TGG - chr2.4:61481145-61481164 MS.gene02877:intron 25.0%
! TAATCATTCTATGCTGAAAA+GGG + chr2.4:61480775-61480794 None:intergenic 25.0%
! TATGGAATAAAAGTAGGATA+TGG - chr2.4:61482306-61482325 MS.gene02877:intron 25.0%
! TGGAAACATTATTCATTTGT+TGG - chr2.4:61480810-61480829 MS.gene02877:intron 25.0%
! TTAAAGAAGCAATACATTGT+GGG - chr2.4:61481042-61481061 MS.gene02877:intron 25.0%
! TTAATAAATTGTGAAGCTGA+AGG - chr2.4:61480839-61480858 MS.gene02877:intron 25.0%
! TTTATACATAACAGGTTCTT+AGG - chr2.4:61481916-61481935 MS.gene02877:intron 25.0%
! TTTATGTAGTTTAGGGAAAT+TGG - chr2.4:61479411-61479430 MS.gene02877:intron 25.0%
!! AATATAACCTATCCTTTTAC+AGG - chr2.4:61481975-61481994 MS.gene02877:intron 25.0%
!! ATCCTGAATCTTTTTGTATA+TGG + chr2.4:61482022-61482041 None:intergenic 25.0%
!! TTTTTATGAATGCCTGTAAA+AGG + chr2.4:61481990-61482009 None:intergenic 25.0%
!!! GAGTATTCTTTGAAACAAAA+TGG + chr2.4:61480194-61480213 None:intergenic 25.0%
!!! GTGTTTTGTTAAGAATTTGT+GGG - chr2.4:61482113-61482132 MS.gene02877:intron 25.0%
!!! TATTTTATGGACTAAATGGA+TGG - chr2.4:61479450-61479469 MS.gene02877:intron 25.0%
!!! TGGAGTTGATGATTATTATT+AGG - chr2.4:61482230-61482249 MS.gene02877:intron 25.0%
!!! TTTGAGTTTTTATATGCCTT+GGG - chr2.4:61481459-61481478 MS.gene02877:intron 25.0%
!!! TTTTGAGTTTTTATATGCCT+TGG - chr2.4:61481458-61481477 MS.gene02877:intron 25.0%
AATGAGAACCTAACTATATG+GGG - chr2.4:61480338-61480357 MS.gene02877:intron 30.0%
AATGATTATCCAGATTTCAG+TGG - chr2.4:61480787-61480806 MS.gene02877:intron 30.0%
AATGGAACAACATACTATGT+GGG - chr2.4:61481510-61481529 MS.gene02877:intron 30.0%
ACAATCTGTGTATGTTTCAA+GGG - chr2.4:61482171-61482190 MS.gene02877:intron 30.0%
AGAATGAGAACCTAACTATA+TGG - chr2.4:61480336-61480355 MS.gene02877:intron 30.0%
AGATTTGTCATTCTTTACCT+CGG - chr2.4:61482090-61482109 MS.gene02877:intron 30.0%
AGTATGAACATTGAACAAGT+TGG + chr2.4:61479870-61479889 None:intergenic 30.0%
ATAATAATCATCAACTCCAG+AGG + chr2.4:61482229-61482248 None:intergenic 30.0%
ATAATAGAAGTCAAAGCTTG+AGG + chr2.4:61480978-61480997 None:intergenic 30.0%
ATGCAGATAGGAACTATATT+TGG - chr2.4:61480099-61480118 MS.gene02877:intron 30.0%
ATTTCATGTAATCCTTGAGA+TGG + chr2.4:61481260-61481279 None:intergenic 30.0%
CAAATCATATTTCAAGCAAC+TGG + chr2.4:61481299-61481318 None:intergenic 30.0%
CTCTTCAAATACATCATCAT+CGG - chr2.4:61479002-61479021 MS.gene02877:CDS 30.0%
CTTATTCACTATATTTCAGG+CGG - chr2.4:61480869-61480888 MS.gene02877:intron 30.0%
GAAAAAATTGTGTAGGAGTT+GGG - chr2.4:61479665-61479684 MS.gene02877:CDS 30.0%
GAACCAAATAGAAATCTTGA+GGG + chr2.4:61480000-61480019 None:intergenic 30.0%
GAATGAGAACCTAACTATAT+GGG - chr2.4:61480337-61480356 MS.gene02877:intron 30.0%
TAAAGAAGCAATACATTGTG+GGG - chr2.4:61481043-61481062 MS.gene02877:intron 30.0%
TAATGGAACAACATACTATG+TGG - chr2.4:61481509-61481528 MS.gene02877:intron 30.0%
TACAATCTGTGTATGTTTCA+AGG - chr2.4:61482170-61482189 MS.gene02877:intron 30.0%
TATTATCAATCGTGATCATC+CGG + chr2.4:61479771-61479790 None:intergenic 30.0%
TCTAAACTAATCTTCTCAAG+TGG - chr2.4:61480440-61480459 MS.gene02877:CDS 30.0%
TGAAAAAATTGTGTAGGAGT+TGG - chr2.4:61479664-61479683 MS.gene02877:CDS 30.0%
TGAACCAAATAGAAATCTTG+AGG + chr2.4:61480001-61480020 None:intergenic 30.0%
TGCTTGTTTATGATATAACC+AGG - chr2.4:61480949-61480968 MS.gene02877:intron 30.0%
TTATTCACTATATTTCAGGC+GGG - chr2.4:61480870-61480889 MS.gene02877:intron 30.0%
TTTGAGTGCATCCAATTTAA+TGG - chr2.4:61481492-61481511 MS.gene02877:intron 30.0%
! AGCCAGATTTTATACATAAC+AGG - chr2.4:61481908-61481927 MS.gene02877:intron 30.0%
! AGTTTTTGATGTATCGAATG+AGG - chr2.4:61482044-61482063 MS.gene02877:intron 30.0%
! ATTCATTGGCTGATTATCAT+TGG - chr2.4:61480055-61480074 MS.gene02877:intron 30.0%
! CAGTCTTATGGAATAAAAGT+AGG - chr2.4:61482300-61482319 MS.gene02877:intron 30.0%
! TAGGAACTATATTTGGTAGT+AGG - chr2.4:61480106-61480125 MS.gene02877:intron 30.0%
! TATATTTGGTAGTAGGCTTA+GGG - chr2.4:61480113-61480132 MS.gene02877:intron 30.0%
!! GGTGTTTTGTTAAGAATTTG+TGG - chr2.4:61482112-61482131 MS.gene02877:intron 30.0%
!! TATTGTTGATTCTCGTTTCT+AGG - chr2.4:61479923-61479942 MS.gene02877:intron 30.0%
!! TGTAGTTTAAGTTTTGGTAG+TGG - chr2.4:61479603-61479622 MS.gene02877:CDS 30.0%
!! TTCTTTGAAACAAAATGGCA+TGG + chr2.4:61480189-61480208 None:intergenic 30.0%
!!! GGTTCTTAGGTTGAATATTT+TGG - chr2.4:61481929-61481948 MS.gene02877:intron 30.0%
AAAGAAGCAATACATTGTGG+GGG - chr2.4:61481044-61481063 MS.gene02877:intron 35.0%
AAATTTCACAGAACCTCATC+TGG + chr2.4:61480733-61480752 None:intergenic 35.0%
AACAAAATTTGACCCAGATG+AGG - chr2.4:61480717-61480736 MS.gene02877:intron 35.0%
AATCCTTCAGATCTATCACA+AGG - chr2.4:61480898-61480917 MS.gene02877:intron 35.0%
AATTCTTAACAAAACACCCG+AGG + chr2.4:61482110-61482129 None:intergenic 35.0%
AATTTCACAGAACCTCATCT+GGG + chr2.4:61480732-61480751 None:intergenic 35.0%
ACTTTCATCCCCATATAGTT+AGG + chr2.4:61480349-61480368 None:intergenic 35.0%
AGCTAAGAATGATCTTCCTT+AGG - chr2.4:61481202-61481221 MS.gene02877:intron 35.0%
ATATGAAGAGCTATGCAGAT+AGG - chr2.4:61480087-61480106 MS.gene02877:intron 35.0%
ATCACAAGGTCATATTACAG+AGG - chr2.4:61480912-61480931 MS.gene02877:intron 35.0%
ATCTTGAGGGTGAAACTAAA+AGG + chr2.4:61479987-61480006 None:intergenic 35.0%
ATGAATGCCTGTAAAAGGAT+AGG + chr2.4:61481985-61482004 None:intergenic 35.0%
ATTATCAATCGTGATCATCC+GGG + chr2.4:61479770-61479789 None:intergenic 35.0%
CATTTAATCACTTAGCTAGC+TGG - chr2.4:61481647-61481666 MS.gene02877:CDS 35.0%
CTAACCATTTGAAAACTGGA+AGG + chr2.4:61480552-61480571 None:intergenic 35.0%
GATTTGTCATTCTTTACCTC+GGG - chr2.4:61482091-61482110 MS.gene02877:intron 35.0%
GCGACATAAATTTCAATGAG+AGG + chr2.4:61480607-61480626 None:intergenic 35.0%
GCTAAGAATGATCTTCCTTA+GGG - chr2.4:61481203-61481222 MS.gene02877:intron 35.0%
GGAATAAAAGTAGGATATGG+TGG - chr2.4:61482309-61482328 MS.gene02877:intron 35.0%
GTGATCATCATTTCAATCCA+GGG - chr2.4:61479961-61479980 MS.gene02877:intron 35.0%
TAATCTTCTCAAGTGGTCAT+GGG - chr2.4:61480447-61480466 MS.gene02877:CDS 35.0%
TCACAAGGTCATATTACAGA+GGG - chr2.4:61480913-61480932 MS.gene02877:intron 35.0%
TCACCCTCAAGATTTCTATT+TGG - chr2.4:61479994-61480013 MS.gene02877:intron 35.0%
TCCCATATTTGCAACTTGAT+TGG + chr2.4:61479796-61479815 None:intergenic 35.0%
TGACTGACCAATAATTGTTC+CGG + chr2.4:61479346-61479365 None:intergenic 35.0%
TGTGATCATCATTTCAATCC+AGG - chr2.4:61479960-61479979 MS.gene02877:intron 35.0%
TTCATATGCTTGCAGTCTTA+TGG - chr2.4:61482288-61482307 MS.gene02877:intron 35.0%
! AGCCAATCAAGTTGCAAATA+TGG - chr2.4:61479791-61479810 MS.gene02877:intron 35.0%
! ATCTAATAGATGGGAGTGTA+GGG - chr2.4:61480489-61480508 MS.gene02877:intron 35.0%
! CGATGATGATGTATTTGAAG+AGG + chr2.4:61479004-61479023 None:intergenic 35.0%
! CGTTTCTAGGAATTGGTAAT+TGG - chr2.4:61479936-61479955 MS.gene02877:intron 35.0%
! CTATATTTGGTAGTAGGCTT+AGG - chr2.4:61480112-61480131 MS.gene02877:intron 35.0%
! CTCTCTTTTCTTCCAAACTT+TGG + chr2.4:61481160-61481179 None:intergenic 35.0%
! CTGCTGTTTGTCATATTTGT+AGG - chr2.4:61480142-61480161 MS.gene02877:intron 35.0%
! GCCAATCAAGTTGCAAATAT+GGG - chr2.4:61479792-61479811 MS.gene02877:intron 35.0%
! TATCTAATAGATGGGAGTGT+AGG - chr2.4:61480488-61480507 MS.gene02877:intron 35.0%
! TGAACATTGAACAAGTTGGA+AGG + chr2.4:61479866-61479885 None:intergenic 35.0%
! TGATTCTCGTTTCTAGGAAT+TGG - chr2.4:61479929-61479948 MS.gene02877:intron 35.0%
!! AAAACTGGAAGGTACCTTAA+GGG + chr2.4:61480541-61480560 None:intergenic 35.0%
!! ATAAAATCTGGCTTTCCTTG+TGG + chr2.4:61481901-61481920 None:intergenic 35.0%
!! TAAAATCTGGCTTTCCTTGT+GGG + chr2.4:61481900-61481919 None:intergenic 35.0%
!! TGGCTTTGTAGATGTAAGAT+AGG - chr2.4:61480415-61480434 MS.gene02877:CDS 35.0%
AACAGTTTGCAAAGGAGAAC+GGG - chr2.4:61481773-61481792 MS.gene02877:intron 40.0%
AACTGCTCAGAATGTTGAAG+AGG - chr2.4:61481822-61481841 MS.gene02877:intron 40.0%
AAGAAGCAATACATTGTGGG+GGG - chr2.4:61481045-61481064 MS.gene02877:intron 40.0%
AATCTTCTCAAGTGGTCATG+GGG - chr2.4:61480448-61480467 MS.gene02877:CDS 40.0%
ACCCTGTGTTTATGAATAGG+AGG - chr2.4:61481620-61481639 MS.gene02877:CDS 40.0%
AGAAGGTGAACAGTTTGCAA+AGG - chr2.4:61481765-61481784 MS.gene02877:intron 40.0%
ATAATTGTTCCGGTCAGTGA+TGG + chr2.4:61479336-61479355 None:intergenic 40.0%
ATGAATAGTGCGATGGAGTT+AGG + chr2.4:61479387-61479406 None:intergenic 40.0%
ATGTTTCCACCACTGAAATC+TGG + chr2.4:61480799-61480818 None:intergenic 40.0%
ATTCTATGCTGAAAAGGGAC+TGG + chr2.4:61480770-61480789 None:intergenic 40.0%
CACAAGGTCATATTACAGAG+GGG - chr2.4:61480914-61480933 MS.gene02877:intron 40.0%
CAGGCATTCATAAAAACAGC+TGG - chr2.4:61481994-61482013 MS.gene02877:intron 40.0%
CCCTCCTATTCATAAACACA+GGG + chr2.4:61481624-61481643 None:intergenic 40.0%
CCCTGTGTTTATGAATAGGA+GGG - chr2.4:61481621-61481640 MS.gene02877:CDS 40.0%
CTAATCTTCTCAAGTGGTCA+TGG - chr2.4:61480446-61480465 MS.gene02877:CDS 40.0%
CTATTCATAAACACAGGGTC+AGG + chr2.4:61481619-61481638 None:intergenic 40.0%
CTCAAAACATGTATCTCCCA+AGG + chr2.4:61481478-61481497 None:intergenic 40.0%
CTGACCCTGTGTTTATGAAT+AGG - chr2.4:61481617-61481636 MS.gene02877:CDS 40.0%
GAACAGTTTGCAAAGGAGAA+CGG - chr2.4:61481772-61481791 MS.gene02877:intron 40.0%
GAATGATCTTCCTTAGGGTT+AGG - chr2.4:61481208-61481227 MS.gene02877:intron 40.0%
GATTATCCAGATTTCAGTGG+TGG - chr2.4:61480790-61480809 MS.gene02877:intron 40.0%
TAATCACTTAGCTAGCTGGT+TGG - chr2.4:61481651-61481670 MS.gene02877:CDS 40.0%
TCACTGACCGGAACAATTAT+TGG - chr2.4:61479336-61479355 MS.gene02877:CDS 40.0%
TCCCTCCTATTCATAAACAC+AGG + chr2.4:61481625-61481644 None:intergenic 40.0%
TCTGTGTATGTTTCAAGGGA+AGG - chr2.4:61482175-61482194 MS.gene02877:intron 40.0%
TGACCTTGTGATAGATCTGA+AGG + chr2.4:61480904-61480923 None:intergenic 40.0%
! ATAGAAAAGTGTAGCTCCTC+TGG - chr2.4:61482210-61482229 MS.gene02877:intron 40.0%
! GGTACCTTCCAGTTTTCAAA+TGG - chr2.4:61480545-61480564 MS.gene02877:intron 40.0%
! TGCGATATGGGATTTGGTAA+TGG - chr2.4:61480512-61480531 MS.gene02877:intron 40.0%
!! GAAAACTGGAAGGTACCTTA+AGG + chr2.4:61480542-61480561 None:intergenic 40.0%
!! TGTGGGACAATTTTGATGCA+TGG - chr2.4:61481527-61481546 MS.gene02877:intron 40.0%
!! TTGACCATCGGTGTTGAATT+TGG - chr2.4:61479742-61479761 MS.gene02877:intron 40.0%
!! TTTGGTAATGGTGACCCTTA+AGG - chr2.4:61480524-61480543 MS.gene02877:intron 40.0%
ACCGATGGTCAAGTCATGAA+CGG + chr2.4:61479734-61479753 None:intergenic 45.0%
AGGTGTAGTTCCTAACCCTA+AGG + chr2.4:61481221-61481240 None:intergenic 45.0%
AGTCAAAGCTTGAGGATACC+TGG + chr2.4:61480970-61480989 None:intergenic 45.0%
AGTGTGATCTTGCTCACAGA+CGG - chr2.4:61481728-61481747 MS.gene02877:intron 45.0%
GGGGGATGATGAAAATCACT+GGG - chr2.4:61481063-61481082 MS.gene02877:intron 45.0%
TACATCATCATCGGCGATAC+TGG - chr2.4:61479011-61479030 MS.gene02877:CDS 45.0%
TAGTGGCAATTCATGCCAGA+GGG - chr2.4:61479620-61479639 MS.gene02877:CDS 45.0%
TCACTGGGACAAGTCATGAA+TGG - chr2.4:61481078-61481097 MS.gene02877:intron 45.0%
TTCCAGCTTCGATTTCCGAT+CGG - chr2.4:61479121-61479140 MS.gene02877:intron 45.0%
! ATTCTGAGCAGTTTTTGCCG+AGG + chr2.4:61481815-61481834 None:intergenic 45.0%
! GTAGGATATGGTGGAATTCC+TGG - chr2.4:61482318-61482337 MS.gene02877:intron 45.0%
AAGTGGTCATGGGGTATGGA+TGG - chr2.4:61480457-61480476 MS.gene02877:CDS 50.0%
AGAGAGACACCATCGTCTGA+TGG - chr2.4:61481174-61481193 MS.gene02877:intron 50.0%
AGCTAAGTGCCATCAGACGA+TGG + chr2.4:61481186-61481205 None:intergenic 50.0%
AGGGTGAAACTAAAAGGCCC+TGG + chr2.4:61479981-61480000 None:intergenic 50.0%
ATCCGATCGGAAATCGAAGC+TGG + chr2.4:61479126-61479145 None:intergenic 50.0%
CCACTTCACAGTCCATCTCA+AGG - chr2.4:61481245-61481264 MS.gene02877:intron 50.0%
CCCGTTCATGACTTGACCAT+CGG - chr2.4:61479730-61479749 MS.gene02877:intron 50.0%
CCGATGGTCAAGTCATGAAC+GGG + chr2.4:61479733-61479752 None:intergenic 50.0%
CTAGCTGGTTGGAAGATGCA+AGG - chr2.4:61481662-61481681 MS.gene02877:CDS 50.0%
GGCACCAAATTCAACACCGA+TGG + chr2.4:61479749-61479768 None:intergenic 50.0%
GGGGGGATGATGAAAATCAC+TGG - chr2.4:61481062-61481081 MS.gene02877:intron 50.0%
GGTCATAAAACCAAGCCCTC+TGG + chr2.4:61479638-61479657 None:intergenic 50.0%
GTAGGGTGCGATATGGGATT+TGG - chr2.4:61480506-61480525 MS.gene02877:intron 50.0%
GTAGTGGCAATTCATGCCAG+AGG - chr2.4:61479619-61479638 MS.gene02877:CDS 50.0%
GTGTGATCTTGCTCACAGAC+GGG - chr2.4:61481729-61481748 MS.gene02877:intron 50.0%
GTTGATCTTCATGGAGGCCT+CGG - chr2.4:61481795-61481814 MS.gene02877:intron 50.0%
TCATATTACAGAGGGGCTGC+AGG - chr2.4:61480921-61480940 MS.gene02877:intron 50.0%
TCTCAAGTGGTCATGGGGTA+TGG - chr2.4:61480453-61480472 MS.gene02877:CDS 50.0%
! TTCCGGTCAGTGATGGAACT+CGG + chr2.4:61479329-61479348 None:intergenic 50.0%
!! AACGGGTTGAAAGCGCTTGT+CGG + chr2.4:61479716-61479735 None:intergenic 50.0%
!! AATCTGGCTTTCCTTGTGGG+AGG + chr2.4:61481897-61481916 None:intergenic 50.0%
!! ATCTGGCTTTCCTTGTGGGA+GGG + chr2.4:61481896-61481915 None:intergenic 50.0%
!! CCTTGAGATGGACTGTGAAG+TGG + chr2.4:61481248-61481267 None:intergenic 50.0%
!! GAACGGGTTGATCTTCATGG+AGG - chr2.4:61481789-61481808 MS.gene02877:intron 50.0%
!! GGAGAACGGGTTGATCTTCA+TGG - chr2.4:61481786-61481805 MS.gene02877:intron 50.0%
!! TCGGTGTTGAATTTGGTGCC+CGG - chr2.4:61479749-61479768 MS.gene02877:intron 50.0%
!! TGAGATGGACTGTGAAGTGG+CGG + chr2.4:61481245-61481264 None:intergenic 50.0%
ACCCGAGTTCCATCACTGAC+CGG - chr2.4:61479324-61479343 MS.gene02877:CDS 55.0%
CGGGCTGTAAGCACAGAAGA+AGG - chr2.4:61481748-61481767 MS.gene02877:intron 55.0%
GCAATTCATGCCAGAGGGCT+TGG - chr2.4:61479625-61479644 MS.gene02877:CDS 55.0%
GGAATTCCTGGACCATCTGG+AGG - chr2.4:61482330-61482349 MS.gene02877:intron 55.0%
GGTGGAATTCCTGGACCATC+TGG - chr2.4:61482327-61482346 MS.gene02877:intron 55.0%
GTGCGATGGAGTTAGGCAAG+AGG + chr2.4:61479380-61479399 None:intergenic 55.0%
TAGGGATGGACCTTCTGCTG+CGG - chr2.4:61482353-61482372 MS.gene02877:CDS 55.0%
TCCTGGACCATCTGGAGGTA+GGG - chr2.4:61482335-61482354 MS.gene02877:intron 55.0%
TTCCTGGACCATCTGGAGGT+AGG - chr2.4:61482334-61482353 MS.gene02877:intron 55.0%
TTCCTTGTGGGAGGGTGGAT+GGG + chr2.4:61481888-61481907 None:intergenic 55.0%
TTTCCTTGTGGGAGGGTGGA+TGG + chr2.4:61481889-61481908 None:intergenic 55.0%
! GGGAGTGTAGGGTGCGATAT+GGG - chr2.4:61480500-61480519 MS.gene02877:intron 55.0%
! TCCGGTCAGTGATGGAACTC+GGG + chr2.4:61479328-61479347 None:intergenic 55.0%
! TGGGAGTGTAGGGTGCGATA+TGG - chr2.4:61480499-61480518 MS.gene02877:intron 55.0%
AGGGATGGACCTTCTGCTGC+GGG - chr2.4:61482354-61482373 MS.gene02877:CDS 60.0%
GGACCATCTGGAGGTAGGGA+TGG - chr2.4:61482339-61482358 MS.gene02877:intron 60.0%
GGTCCATCCCTACCTCCAGA+TGG + chr2.4:61482345-61482364 None:intergenic 60.0%
TCCCTACCTCCAGATGGTCC+AGG + chr2.4:61482339-61482358 None:intergenic 60.0%
TGGCTTTCCTTGTGGGAGGG+TGG + chr2.4:61481893-61481912 None:intergenic 60.0%
TTCCCATCCACCCTCCCACA+AGG - chr2.4:61481883-61481902 MS.gene02877:intron 60.0%
! ATGGACTGTGAAGTGGCGGC+AGG + chr2.4:61481241-61481260 None:intergenic 60.0%
GATGGACCTTCTGCTGCGGG+TGG - chr2.4:61482357-61482376 MS.gene02877:CDS 65.0%
CAGCCTCCACCCGCAGCAGA+AGG + chr2.4:61482366-61482385 None:intergenic 70.0%
GGACCTTCTGCTGCGGGTGG+AGG - chr2.4:61482360-61482379 MS.gene02877:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 61478987 61482395 61478987 ID=MS.gene02877
chr2.4 mRNA 61478987 61482395 61478987 ID=MS.gene02877.t1;Parent=MS.gene02877
chr2.4 exon 61482350 61482395 61482350 ID=MS.gene02877.t1.exon1;Parent=MS.gene02877.t1
chr2.4 CDS 61482350 61482395 61482350 ID=cds.MS.gene02877.t1;Parent=MS.gene02877.t1
chr2.4 exon 61481563 61481702 61481563 ID=MS.gene02877.t1.exon2;Parent=MS.gene02877.t1
chr2.4 CDS 61481563 61481702 61481563 ID=cds.MS.gene02877.t1;Parent=MS.gene02877.t1
chr2.4 exon 61480412 61480494 61480412 ID=MS.gene02877.t1.exon3;Parent=MS.gene02877.t1
chr2.4 CDS 61480412 61480494 61480412 ID=cds.MS.gene02877.t1;Parent=MS.gene02877.t1
chr2.4 exon 61479539 61479743 61479539 ID=MS.gene02877.t1.exon4;Parent=MS.gene02877.t1
chr2.4 CDS 61479539 61479743 61479539 ID=cds.MS.gene02877.t1;Parent=MS.gene02877.t1
chr2.4 exon 61479317 61479385 61479317 ID=MS.gene02877.t1.exon5;Parent=MS.gene02877.t1
chr2.4 CDS 61479317 61479385 61479317 ID=cds.MS.gene02877.t1;Parent=MS.gene02877.t1
chr2.4 exon 61478987 61479079 61478987 ID=MS.gene02877.t1.exon6;Parent=MS.gene02877.t1
chr2.4 CDS 61478987 61479079 61478987 ID=cds.MS.gene02877.t1;Parent=MS.gene02877.t1
Gene Sequence

>MS.gene02877

ATGTCTTACGCATACCTCTTCAAATACATCATCATCGGCGATACTGGTAATTATAATCTCAATTAACCCCTTTCTAATCTCTTTTTATTTATCTTAATTAATCTCAATTTATTCTATTCTCTTAATCATGCGTCTTCCAGCTTCGATTTCCGATCGGATTTATTCATTTTTCTTTTCAGGGTTTTTGTTTTGTTTGAGAATTATTTTATATATTATATTTGATGTTGATTCTCTTGTGTTATTTTAACAAGCTAACAAAATTTTGATTATTACTAAATATTCATAAGTATTTACTAGTAGTTAATGAGGTTTAATTAATGAAGAATCGATCAGAAGCACCCGAGTTCCATCACTGACCGGAACAATTATTGGTCAGTCAGACTTTAGTTACCTCTTGCCTAACTCCATCGCACTATTCATTATTTTTATGTAGTTTAGGGAAATTGGAGTTAAAGTGATAGTTTATTTTATGGACTAAATGGATGGTTTATTCAATTTTGTTATTGTGATGGATCCTTTATTGTTAGTTTTGTTTCATTAACTATGAATGAAAACTGTTGAGTGTGTTATATATAGTTTGATCCTTATTTCGTTTAGTTTGTATTTTGTTAAATTATGTAGTTTAAGTTTTGGTAGTGGCAATTCATGCCAGAGGGCTTGGTTTTATGACCTTATTTTGAAAAAATTGTGTAGGAGTTGGGAAGTCATGTCTTCTACTTCAGTTCACCGACAAGCGCTTTCAACCCGTTCATGACTTGACCATCGGTGTTGAATTTGGTGCCCGGATGATCACGATTGATAATAAGCCAATCAAGTTGCAAATATGGGATACAGTATGTTTGTCAACTCTTTCATAGAACTTGTTTATTACTTACTCCTTCCAACTTGTTCAATGTTCATACTTAATTACTAATTTACATACAAATCTGTGAAAATTATTGTTGATTCTCGTTTCTAGGAATTGGTAATTGGTTGTGATCATCATTTCAATCCAGGGCCTTTTAGTTTCACCCTCAAGATTTCTATTTGGTTCAAAATGATATTTCATATTATTATCATTTTATGTTGATTCATTGGCTGATTATCATTGGCTGATTTTCATATGAAGAGCTATGCAGATAGGAACTATATTTGGTAGTAGGCTTAGGGTTGATGCTGCTGTTTGTCATATTTGTAGGCTGTCGCTATAATTTTAACATCCATGCCATTTTGTTTCAAAGAATACTCTGCTAAGTGTAATAATAACATGCCTTGTTATTTTGAAATTTTGTATCTATAACTCTCTTTATAATGTTAAAAAATCATCACTGTTCCACTTAATATATAATCCATTTACATTTACATTGTTGAGAATGAGAACCTAACTATATGGGGATGAAAGTATTTGAATTTATCTGTAAAAGTTACTATATACATGAAATAAATTTATGGCTTTGTAGATGTAAGATAGGTTTCTAAACTAATCTTCTCAAGTGGTCATGGGGTATGGATGGAAAGATTTTATCTAATAGATGGGAGTGTAGGGTGCGATATGGGATTTGGTAATGGTGACCCTTAAGGTACCTTCCAGTTTTCAAATGGTTAGTTTTACAAGATTGACTACAGAAATAAATAGGTCCTCTCATTGAAATTTATGTCGCCTTGTTATTTTGAAATTTTGTATCTATAACTCTCTTTATAATGTTAAAAAATTTTCAGTTTTCCACTTAATATATAAACAGAGATATAAAAACAAAATTTGACCCAGATGAGGTTCTGTGAAATTTCAACATGAGATAATCCAGTCCCTTTTCAGCATAGAATGATTATCCAGATTTCAGTGGTGGAAACATTATTCATTTGTTGGTTGAGTTTAATAAATTGTGAAGCTGAAGGTACTGAACTTATTCACTATATTTCAGGCGGGTCAAGAATCCTTCAGATCTATCACAAGGTCATATTACAGAGGGGCTGCAGGTGCACTGCTTGTTTATGATATAACCAGGTATCCTCAAGCTTTGACTTCTATTATCTGAGTTTGAAATCCCAAAATACAATAATTATTTTCACTTAAAATTAAAGAAGCAATACATTGTGGGGGGATGATGAAAATCACTGGGACAAGTCATGAATGGAGTCGCTCGTATTAGACTATAAGTTACTCGGTTCGATTGTCTCTTAAATAATCTCACCAAAGTTTGGAAGAAAAGAGAGACACCATCGTCTGATGGCACTTAGCTAAGAATGATCTTCCTTAGGGTTAGGAACTACACCTGCCGCCACTTCACAGTCCATCTCAAGGATTACATGAAATATTAATGTTATATCTTCCAGTTGCTTGAAATATGATTTGCAAATCATTTTGGTCTGTTTATAACTGTTTAAATACAATTTCATAACTTGGGCTAAATAGCTTTTAGATTTTTTCTAGGGAAGATATGACGAGTTTGTCCAACAAAAATCAATTTATTGAAAAACATTGATAACACGCATTTTGAGTTTTTATATGCCTTGGGAGATACATGTTTTGAGTGCATCCAATTTAATGGAACAACATACTATGTGGGACAATTTTGATGCATGGATGCCTATGTAGTTTCATGTTAGTTTTATGTGTTGTTTAATGTAAATAAGGCACAATATAAACAATCCTGACCCTGTGTTTATGAATAGGAGGGAGACATTTAATCACTTAGCTAGCTGGTTGGAAGATGCAAGGCAGCATGCAAATGCAAATATGACAATTATGCTGATTGGCAACAAGTGTGATCTTGCTCACAGACGGGCTGTAAGCACAGAAGAAGGTGAACAGTTTGCAAAGGAGAACGGGTTGATCTTCATGGAGGCCTCGGCAAAAACTGCTCAGAATGTTGAAGAGGTCAGAACTCACATCCTATCTATTGTTTTCTTCATTTATTTCCCATCCACCCTCCCACAAGGAAAGCCAGATTTTATACATAACAGGTTCTTAGGTTGAATATTTTGGAAAATTATCTGTATAAAAGTTTTAATATAACCTATCCTTTTACAGGCATTCATAAAAACAGCTGGAACCATATACAAAAAGATTCAGGATGGAGTTTTTGATGTATCGAATGAGGTTAGTTTCTTTTTTCATTTTTTTAGATTTGTCATTCTTTACCTCGGGTGTTTTGTTAAGAATTTGTGGGATATTCAATTTCACTGTGTCCTTTATTTTTGTAATACAATCTGTGTATGTTTCAAGGGAAGGCTAATGATTATTATAGAAAAGTGTAGCTCCTCTGGAGTTGATGATTATTATTAGGCTAATGATTATTCAACAAACAAGTCACTGATAATTTTCATATGCTTGCAGTCTTATGGAATAAAAGTAGGATATGGTGGAATTCCTGGACCATCTGGAGGTAGGGATGGACCTTCTGCTGCGGGTGGAGGCTGCTGCAGTTGA
Protein sequence

>MS.gene02877.t1

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS