Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33386.t1 | RHN58651.1 | 100 | 207 | 0 | 0 | 1 | 207 | 57 | 263 | 3.40E-116 | 427.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33386.t1 | O24461 | 95.7 | 207 | 9 | 0 | 1 | 207 | 1 | 207 | 1.0e-113 | 410.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33386.t1 | B7FN46 | 100.0 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.4e-116 | 427.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056752 | MS.gene33386 | 0.815988 | 6.97E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33386.t1 | MTR_4g012940 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 4.48e-157 | 432 |
| MS.gene33386.t1 | MTR_2g101890 | 96.098 | 205 | 8 | 0 | 3 | 207 | 5 | 209 | 6.54e-151 | 417 |
| MS.gene33386.t1 | MTR_4g069850 | 88.406 | 207 | 23 | 1 | 1 | 207 | 1 | 206 | 8.41e-137 | 381 |
| MS.gene33386.t1 | MTR_1g097420 | 72.464 | 207 | 57 | 0 | 1 | 207 | 1 | 207 | 8.98e-111 | 315 |
| MS.gene33386.t1 | MTR_1g097420 | 64.103 | 234 | 57 | 1 | 1 | 207 | 1 | 234 | 1.19e-104 | 301 |
| MS.gene33386.t1 | MTR_8g092020 | 64.706 | 204 | 72 | 0 | 2 | 205 | 6 | 209 | 2.98e-100 | 289 |
| MS.gene33386.t1 | MTR_6g039490 | 64.865 | 185 | 65 | 0 | 1 | 185 | 1 | 185 | 1.51e-85 | 252 |
| MS.gene33386.t1 | MTR_1452s0010 | 81.928 | 83 | 15 | 0 | 28 | 110 | 1 | 83 | 1.14e-46 | 149 |
| MS.gene33386.t1 | MTR_5g013900 | 39.216 | 204 | 111 | 3 | 10 | 207 | 11 | 207 | 2.55e-42 | 142 |
| MS.gene33386.t1 | MTR_2g005510 | 36.607 | 224 | 118 | 6 | 1 | 207 | 1 | 217 | 4.12e-41 | 139 |
| MS.gene33386.t1 | MTR_2g005500 | 36.318 | 201 | 118 | 4 | 8 | 205 | 9 | 202 | 1.39e-38 | 132 |
| MS.gene33386.t1 | MTR_4g098950 | 37.438 | 203 | 115 | 3 | 10 | 207 | 11 | 206 | 1.96e-38 | 132 |
| MS.gene33386.t1 | MTR_8g006970 | 37.313 | 201 | 116 | 4 | 8 | 205 | 22 | 215 | 2.16e-38 | 132 |
| MS.gene33386.t1 | MTR_4g064897 | 35.885 | 209 | 116 | 5 | 8 | 205 | 12 | 213 | 2.92e-38 | 132 |
| MS.gene33386.t1 | MTR_3g087160 | 38.235 | 204 | 112 | 4 | 10 | 207 | 11 | 206 | 3.59e-38 | 131 |
| MS.gene33386.t1 | MTR_8g090215 | 39.216 | 204 | 111 | 4 | 10 | 207 | 11 | 207 | 3.86e-38 | 131 |
| MS.gene33386.t1 | MTR_7g081700 | 37.811 | 201 | 114 | 5 | 8 | 205 | 8 | 200 | 6.70e-38 | 130 |
| MS.gene33386.t1 | MTR_2g014990 | 38.500 | 200 | 101 | 7 | 8 | 195 | 13 | 202 | 8.39e-38 | 130 |
| MS.gene33386.t1 | MTR_4g088090 | 37.500 | 200 | 103 | 7 | 8 | 195 | 13 | 202 | 2.54e-37 | 129 |
| MS.gene33386.t1 | MTR_3g069510 | 36.667 | 210 | 114 | 7 | 8 | 205 | 12 | 214 | 3.07e-37 | 129 |
| MS.gene33386.t1 | MTR_1g068740 | 37.379 | 206 | 117 | 5 | 8 | 207 | 15 | 214 | 4.48e-37 | 129 |
| MS.gene33386.t1 | MTR_2g096550 | 38.983 | 177 | 103 | 4 | 8 | 184 | 15 | 186 | 5.41e-37 | 128 |
| MS.gene33386.t1 | MTR_4g079350 | 40.741 | 162 | 89 | 3 | 8 | 169 | 13 | 167 | 8.97e-37 | 128 |
| MS.gene33386.t1 | MTR_1g068730 | 36.893 | 206 | 118 | 5 | 8 | 207 | 15 | 214 | 1.29e-36 | 127 |
| MS.gene33386.t1 | MTR_1g115325 | 35.122 | 205 | 120 | 4 | 8 | 205 | 15 | 213 | 1.85e-36 | 127 |
| MS.gene33386.t1 | MTR_8g006970 | 40.964 | 166 | 91 | 3 | 8 | 173 | 8 | 166 | 3.60e-36 | 125 |
| MS.gene33386.t1 | MTR_7g100020 | 40.476 | 168 | 94 | 3 | 8 | 175 | 15 | 176 | 3.90e-36 | 126 |
| MS.gene33386.t1 | MTR_1686s0010 | 65.000 | 80 | 28 | 0 | 28 | 107 | 1 | 80 | 4.60e-35 | 119 |
| MS.gene33386.t1 | MTR_2g075950 | 33.971 | 209 | 120 | 5 | 8 | 205 | 13 | 214 | 6.91e-35 | 123 |
| MS.gene33386.t1 | MTR_8g036220 | 40.741 | 162 | 89 | 3 | 8 | 169 | 16 | 170 | 1.04e-34 | 123 |
| MS.gene33386.t1 | MTR_1g052475 | 36.508 | 189 | 113 | 3 | 8 | 196 | 15 | 196 | 3.12e-34 | 121 |
| MS.gene33386.t1 | MTR_1663s0010 | 70.667 | 75 | 22 | 0 | 110 | 184 | 1 | 75 | 5.23e-34 | 116 |
| MS.gene33386.t1 | MTR_7g405790 | 36.628 | 172 | 102 | 3 | 8 | 179 | 15 | 179 | 7.04e-34 | 120 |
| MS.gene33386.t1 | MTR_2g090865 | 39.506 | 162 | 91 | 3 | 8 | 169 | 11 | 165 | 1.23e-33 | 120 |
| MS.gene33386.t1 | MTR_6g021790 | 37.791 | 172 | 100 | 3 | 8 | 179 | 6 | 170 | 2.28e-33 | 119 |
| MS.gene33386.t1 | MTR_8g103550 | 35.714 | 182 | 110 | 3 | 3 | 184 | 4 | 178 | 2.96e-33 | 118 |
| MS.gene33386.t1 | MTR_7g051940 | 36.047 | 172 | 103 | 3 | 8 | 179 | 13 | 177 | 4.18e-33 | 118 |
| MS.gene33386.t1 | MTR_4g063160 | 36.232 | 207 | 117 | 6 | 8 | 205 | 15 | 215 | 4.48e-33 | 118 |
| MS.gene33386.t1 | MTR_3g086980 | 37.576 | 165 | 96 | 3 | 8 | 172 | 16 | 173 | 8.91e-33 | 117 |
| MS.gene33386.t1 | MTR_2g083860 | 38.272 | 162 | 93 | 3 | 8 | 169 | 13 | 167 | 2.56e-32 | 116 |
| MS.gene33386.t1 | MTR_8g089985 | 36.095 | 169 | 101 | 3 | 4 | 172 | 13 | 174 | 3.62e-32 | 116 |
| MS.gene33386.t1 | MTR_8g031680 | 36.702 | 188 | 109 | 4 | 9 | 196 | 7 | 184 | 3.66e-32 | 115 |
| MS.gene33386.t1 | MTR_0262s0050 | 38.788 | 165 | 94 | 3 | 8 | 172 | 15 | 172 | 6.06e-32 | 115 |
| MS.gene33386.t1 | MTR_3g064390 | 35.632 | 174 | 105 | 3 | 10 | 183 | 12 | 178 | 1.73e-31 | 114 |
| MS.gene33386.t1 | MTR_1g078200 | 37.126 | 167 | 98 | 4 | 8 | 174 | 14 | 173 | 2.70e-31 | 114 |
| MS.gene33386.t1 | MTR_5g076590 | 35.632 | 174 | 105 | 3 | 10 | 183 | 12 | 178 | 3.13e-31 | 113 |
| MS.gene33386.t1 | MTR_6g079550 | 37.654 | 162 | 94 | 3 | 8 | 169 | 12 | 166 | 4.73e-31 | 113 |
| MS.gene33386.t1 | MTR_2g027660 | 37.654 | 162 | 94 | 3 | 8 | 169 | 6 | 160 | 5.18e-31 | 113 |
| MS.gene33386.t1 | MTR_4g099470 | 38.068 | 176 | 98 | 5 | 33 | 205 | 9 | 176 | 6.78e-31 | 111 |
| MS.gene33386.t1 | MTR_8g027220 | 33.032 | 221 | 127 | 6 | 1 | 207 | 19 | 232 | 6.70e-30 | 110 |
| MS.gene33386.t1 | MTR_8g107070 | 38.272 | 162 | 93 | 3 | 8 | 169 | 14 | 168 | 1.34e-29 | 110 |
| MS.gene33386.t1 | MTR_8g031870 | 35.758 | 165 | 99 | 3 | 5 | 169 | 3 | 160 | 2.17e-29 | 108 |
| MS.gene33386.t1 | MTR_1g094220 | 34.503 | 171 | 104 | 4 | 5 | 174 | 28 | 191 | 9.79e-29 | 106 |
| MS.gene33386.t1 | MTR_8g093740 | 36.842 | 171 | 100 | 5 | 8 | 177 | 13 | 176 | 9.87e-29 | 107 |
| MS.gene33386.t1 | MTR_8g031660 | 36.257 | 171 | 102 | 3 | 8 | 178 | 6 | 169 | 4.04e-28 | 105 |
| MS.gene33386.t1 | MTR_1g094220 | 33.146 | 178 | 111 | 4 | 5 | 181 | 28 | 198 | 4.21e-28 | 105 |
| MS.gene33386.t1 | MTR_1g068730 | 40.650 | 123 | 69 | 1 | 8 | 130 | 15 | 133 | 5.26e-28 | 103 |
| MS.gene33386.t1 | MTR_7g117910 | 37.162 | 148 | 85 | 3 | 8 | 155 | 20 | 159 | 8.99e-28 | 104 |
| MS.gene33386.t1 | MTR_1g068740 | 40.650 | 123 | 69 | 1 | 8 | 130 | 15 | 133 | 9.78e-28 | 104 |
| MS.gene33386.t1 | MTR_1812s0010 | 60.274 | 73 | 29 | 0 | 111 | 183 | 2 | 74 | 3.71e-27 | 99.0 |
| MS.gene33386.t1 | MTR_1g029450 | 33.663 | 202 | 108 | 6 | 8 | 190 | 17 | 211 | 5.24e-27 | 102 |
| MS.gene33386.t1 | MTR_1g094220 | 33.333 | 168 | 104 | 4 | 5 | 171 | 28 | 188 | 1.20e-26 | 101 |
| MS.gene33386.t1 | MTR_1g094220 | 33.533 | 167 | 103 | 4 | 5 | 170 | 28 | 187 | 1.43e-26 | 102 |
| MS.gene33386.t1 | MTR_8g031830 | 33.679 | 193 | 110 | 5 | 5 | 197 | 3 | 177 | 2.38e-26 | 100 |
| MS.gene33386.t1 | MTR_7g103070 | 36.970 | 165 | 97 | 5 | 10 | 173 | 18 | 176 | 2.42e-26 | 100 |
| MS.gene33386.t1 | MTR_2g102060 | 31.053 | 190 | 124 | 3 | 10 | 199 | 12 | 194 | 2.78e-26 | 100 |
| MS.gene33386.t1 | MTR_1g090717 | 37.805 | 164 | 94 | 5 | 9 | 170 | 16 | 173 | 2.17e-25 | 98.6 |
| MS.gene33386.t1 | MTR_3g096350 | 35.976 | 164 | 97 | 5 | 8 | 170 | 12 | 168 | 2.37e-25 | 98.2 |
| MS.gene33386.t1 | MTR_1g062760 | 36.364 | 165 | 97 | 5 | 10 | 173 | 16 | 173 | 4.75e-25 | 97.4 |
| MS.gene33386.t1 | MTR_2g093510 | 74.627 | 67 | 17 | 0 | 119 | 185 | 761 | 827 | 8.88e-25 | 101 |
| MS.gene33386.t1 | MTR_3g064390 | 38.017 | 121 | 71 | 1 | 10 | 130 | 12 | 128 | 1.92e-24 | 94.7 |
| MS.gene33386.t1 | MTR_3g107717 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 1.76e-22 | 91.3 |
| MS.gene33386.t1 | MTR_3g107713 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.01e-22 | 90.9 |
| MS.gene33386.t1 | MTR_3g107707 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.03e-22 | 90.9 |
| MS.gene33386.t1 | MTR_3g096350 | 38.525 | 122 | 70 | 3 | 8 | 128 | 12 | 129 | 6.47e-22 | 87.8 |
| MS.gene33386.t1 | MTR_3g096350 | 38.525 | 122 | 70 | 3 | 8 | 128 | 12 | 129 | 1.28e-21 | 87.0 |
| MS.gene33386.t1 | MTR_6g087980 | 30.769 | 208 | 120 | 7 | 8 | 206 | 6 | 198 | 1.19e-20 | 85.9 |
| MS.gene33386.t1 | MTR_8g093740 | 37.594 | 133 | 76 | 4 | 39 | 170 | 10 | 136 | 2.15e-20 | 84.3 |
| MS.gene33386.t1 | MTR_4g088055 | 30.108 | 186 | 113 | 6 | 1 | 177 | 1 | 178 | 8.83e-18 | 78.2 |
| MS.gene33386.t1 | MTR_5g036990 | 52.857 | 70 | 32 | 1 | 39 | 107 | 32 | 101 | 1.39e-17 | 75.5 |
| MS.gene33386.t1 | MTR_4g113620 | 29.480 | 173 | 99 | 6 | 9 | 179 | 14 | 165 | 2.23e-17 | 77.4 |
| MS.gene33386.t1 | MTR_2g090875 | 29.609 | 179 | 111 | 5 | 8 | 177 | 6 | 178 | 5.52e-17 | 75.9 |
| MS.gene33386.t1 | MTR_3g078260 | 30.481 | 187 | 115 | 5 | 1 | 178 | 1 | 181 | 1.22e-16 | 75.5 |
| MS.gene33386.t1 | MTR_5g022600 | 29.570 | 186 | 114 | 7 | 1 | 177 | 1 | 178 | 1.48e-16 | 74.7 |
| MS.gene33386.t1 | MTR_8g075240 | 30.108 | 186 | 113 | 7 | 1 | 177 | 1 | 178 | 3.47e-16 | 73.9 |
| MS.gene33386.t1 | MTR_7g103070 | 38.983 | 118 | 65 | 5 | 57 | 173 | 9 | 120 | 5.92e-16 | 72.4 |
| MS.gene33386.t1 | MTR_4g073250 | 27.419 | 186 | 120 | 4 | 8 | 184 | 6 | 185 | 1.20e-15 | 72.4 |
| MS.gene33386.t1 | MTR_3g078260 | 35.156 | 128 | 76 | 4 | 1 | 127 | 1 | 122 | 1.38e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33386.t1 | AT1G52280 | 91.304 | 207 | 17 | 1 | 1 | 207 | 1 | 206 | 3.93e-142 | 395 |
| MS.gene33386.t1 | AT3G16100 | 90.821 | 207 | 18 | 1 | 1 | 207 | 1 | 206 | 1.42e-141 | 393 |
| MS.gene33386.t1 | AT3G18820 | 89.855 | 207 | 20 | 1 | 1 | 207 | 1 | 206 | 6.00e-138 | 384 |
| MS.gene33386.t1 | AT1G49300 | 87.440 | 207 | 25 | 1 | 1 | 207 | 1 | 206 | 8.45e-134 | 374 |
| MS.gene33386.t1 | AT1G49300 | 87.440 | 207 | 25 | 1 | 1 | 207 | 1 | 206 | 8.45e-134 | 374 |
| MS.gene33386.t1 | AT4G09720 | 70.952 | 210 | 54 | 2 | 1 | 207 | 1 | 206 | 4.35e-109 | 311 |
| MS.gene33386.t1 | AT1G22740 | 71.635 | 208 | 53 | 2 | 1 | 207 | 1 | 203 | 6.93e-109 | 311 |
| MS.gene33386.t1 | AT4G09720 | 67.421 | 221 | 54 | 3 | 1 | 207 | 1 | 217 | 1.83e-105 | 302 |
| MS.gene33386.t1 | AT4G09720 | 68.837 | 215 | 55 | 3 | 1 | 207 | 1 | 211 | 2.04e-105 | 302 |
| MS.gene33386.t1 | AT2G21880 | 63.551 | 214 | 62 | 3 | 4 | 207 | 5 | 212 | 2.55e-94 | 274 |
| MS.gene33386.t1 | AT4G09720 | 68.571 | 175 | 48 | 2 | 36 | 207 | 2 | 172 | 1.65e-85 | 250 |
| MS.gene33386.t1 | AT4G09720 | 68.571 | 175 | 48 | 2 | 36 | 207 | 2 | 172 | 1.65e-85 | 250 |
| MS.gene33386.t1 | AT4G09720 | 68.571 | 175 | 48 | 2 | 36 | 207 | 2 | 172 | 1.65e-85 | 250 |
| MS.gene33386.t1 | AT2G21880 | 59.813 | 214 | 62 | 4 | 4 | 207 | 5 | 204 | 1.40e-84 | 249 |
| MS.gene33386.t1 | AT2G21880 | 61.658 | 193 | 58 | 3 | 25 | 207 | 1 | 187 | 1.06e-80 | 239 |
| MS.gene33386.t1 | AT2G21880 | 61.658 | 193 | 58 | 3 | 25 | 207 | 1 | 187 | 1.06e-80 | 239 |
| MS.gene33386.t1 | AT5G39620 | 58.140 | 172 | 72 | 0 | 9 | 180 | 6 | 177 | 5.20e-71 | 215 |
| MS.gene33386.t1 | AT2G44610 | 39.512 | 205 | 110 | 4 | 10 | 207 | 11 | 208 | 5.08e-41 | 138 |
| MS.gene33386.t1 | AT1G28550 | 37.143 | 210 | 113 | 5 | 8 | 205 | 13 | 215 | 3.00e-39 | 134 |
| MS.gene33386.t1 | AT1G09630 | 41.818 | 165 | 89 | 3 | 8 | 172 | 12 | 169 | 3.54e-39 | 134 |
| MS.gene33386.t1 | AT5G45750 | 36.364 | 209 | 114 | 6 | 8 | 205 | 13 | 213 | 8.93e-38 | 130 |
| MS.gene33386.t1 | AT2G33870 | 35.238 | 210 | 117 | 5 | 8 | 205 | 13 | 215 | 1.45e-37 | 130 |
| MS.gene33386.t1 | AT5G60860 | 38.384 | 198 | 104 | 6 | 8 | 195 | 13 | 202 | 1.70e-37 | 130 |
| MS.gene33386.t1 | AT3G15060 | 41.358 | 162 | 88 | 3 | 8 | 169 | 13 | 167 | 3.34e-37 | 129 |
| MS.gene33386.t1 | AT4G17530 | 39.548 | 177 | 97 | 4 | 8 | 181 | 8 | 177 | 3.39e-37 | 129 |
| MS.gene33386.t1 | AT5G59840 | 37.379 | 206 | 115 | 5 | 8 | 205 | 15 | 214 | 3.95e-37 | 129 |
| MS.gene33386.t1 | AT5G47200 | 37.811 | 201 | 113 | 5 | 8 | 205 | 8 | 199 | 6.01e-37 | 128 |
| MS.gene33386.t1 | AT5G64990 | 39.810 | 211 | 101 | 8 | 10 | 207 | 9 | 206 | 6.70e-37 | 128 |
| MS.gene33386.t1 | AT4G18430 | 34.762 | 210 | 117 | 7 | 8 | 205 | 13 | 214 | 1.73e-36 | 127 |
| MS.gene33386.t1 | AT3G53610 | 38.350 | 206 | 113 | 7 | 8 | 205 | 15 | 214 | 2.21e-36 | 127 |
| MS.gene33386.t1 | AT3G53610 | 38.350 | 206 | 113 | 7 | 8 | 205 | 15 | 214 | 2.21e-36 | 127 |
| MS.gene33386.t1 | AT3G53610 | 38.350 | 206 | 113 | 7 | 8 | 205 | 15 | 214 | 2.21e-36 | 127 |
| MS.gene33386.t1 | AT1G02130 | 35.821 | 201 | 119 | 4 | 8 | 205 | 8 | 201 | 2.45e-36 | 126 |
| MS.gene33386.t1 | AT5G10260 | 37.561 | 205 | 113 | 4 | 10 | 207 | 11 | 207 | 3.86e-36 | 126 |
| MS.gene33386.t1 | AT5G59150 | 38.182 | 165 | 95 | 3 | 8 | 172 | 12 | 169 | 4.98e-36 | 126 |
| MS.gene33386.t1 | AT3G46060 | 36.408 | 206 | 117 | 5 | 8 | 205 | 15 | 214 | 7.54e-36 | 125 |
| MS.gene33386.t1 | AT3G46060 | 36.408 | 206 | 117 | 5 | 8 | 205 | 15 | 214 | 7.54e-36 | 125 |
| MS.gene33386.t1 | AT3G46060 | 36.408 | 206 | 117 | 5 | 8 | 205 | 15 | 214 | 7.54e-36 | 125 |
| MS.gene33386.t1 | AT3G11730 | 35.407 | 209 | 124 | 4 | 1 | 205 | 1 | 202 | 7.94e-36 | 125 |
| MS.gene33386.t1 | AT1G07410 | 38.182 | 165 | 95 | 3 | 8 | 172 | 12 | 169 | 1.24e-35 | 125 |
| MS.gene33386.t1 | AT1G05810 | 35.714 | 182 | 110 | 3 | 4 | 185 | 8 | 182 | 1.32e-35 | 125 |
| MS.gene33386.t1 | AT3G46830 | 38.788 | 165 | 94 | 3 | 8 | 172 | 12 | 169 | 1.48e-35 | 125 |
| MS.gene33386.t1 | AT3G46830 | 38.788 | 165 | 94 | 3 | 8 | 172 | 12 | 169 | 1.48e-35 | 125 |
| MS.gene33386.t1 | AT1G05810 | 35.714 | 182 | 110 | 3 | 4 | 185 | 54 | 228 | 4.01e-35 | 125 |
| MS.gene33386.t1 | AT3G12160 | 40.606 | 165 | 91 | 3 | 8 | 172 | 15 | 172 | 7.32e-35 | 123 |
| MS.gene33386.t1 | AT4G39890 | 40.000 | 165 | 93 | 2 | 9 | 173 | 10 | 168 | 1.15e-34 | 122 |
| MS.gene33386.t1 | AT2G31680 | 34.831 | 178 | 109 | 3 | 8 | 185 | 12 | 182 | 1.78e-34 | 122 |
| MS.gene33386.t1 | AT5G64990 | 38.532 | 218 | 101 | 9 | 10 | 207 | 9 | 213 | 3.88e-34 | 121 |
| MS.gene33386.t1 | AT1G06400 | 34.928 | 209 | 117 | 6 | 8 | 205 | 13 | 213 | 3.93e-34 | 121 |
| MS.gene33386.t1 | AT4G18800 | 39.506 | 162 | 91 | 3 | 8 | 169 | 13 | 167 | 5.05e-34 | 120 |
| MS.gene33386.t1 | AT5G03520 | 41.667 | 168 | 92 | 3 | 8 | 175 | 15 | 176 | 7.82e-34 | 120 |
| MS.gene33386.t1 | AT2G22290 | 36.408 | 206 | 114 | 4 | 10 | 207 | 11 | 207 | 9.21e-34 | 120 |
| MS.gene33386.t1 | AT4G35860 | 37.791 | 172 | 100 | 3 | 8 | 179 | 6 | 170 | 1.47e-33 | 119 |
| MS.gene33386.t1 | AT5G47960 | 36.757 | 185 | 101 | 4 | 8 | 183 | 15 | 192 | 1.90e-33 | 119 |
| MS.gene33386.t1 | AT1G16920 | 38.889 | 162 | 92 | 4 | 8 | 169 | 13 | 167 | 2.47e-33 | 119 |
| MS.gene33386.t1 | AT4G39990 | 37.576 | 165 | 96 | 3 | 8 | 172 | 17 | 174 | 3.05e-33 | 119 |
| MS.gene33386.t1 | AT2G43130 | 34.831 | 178 | 109 | 3 | 8 | 185 | 12 | 182 | 3.27e-33 | 119 |
| MS.gene33386.t1 | AT4G19640 | 36.612 | 183 | 106 | 4 | 10 | 189 | 12 | 187 | 9.08e-33 | 117 |
| MS.gene33386.t1 | AT1G18200 | 40.123 | 162 | 90 | 3 | 8 | 169 | 13 | 167 | 9.36e-33 | 118 |
| MS.gene33386.t1 | AT3G09900 | 42.262 | 168 | 91 | 4 | 8 | 175 | 15 | 176 | 9.50e-33 | 117 |
| MS.gene33386.t1 | AT5G45130 | 35.678 | 199 | 114 | 5 | 10 | 205 | 12 | 199 | 9.58e-33 | 117 |
| MS.gene33386.t1 | AT4G17160 | 34.314 | 204 | 120 | 4 | 9 | 205 | 7 | 203 | 2.78e-32 | 116 |
| MS.gene33386.t1 | AT5G65270 | 36.364 | 165 | 98 | 3 | 8 | 172 | 17 | 174 | 4.82e-32 | 116 |
| MS.gene33386.t1 | AT3G07410 | 35.465 | 172 | 104 | 3 | 8 | 179 | 12 | 176 | 7.89e-32 | 115 |
| MS.gene33386.t1 | AT5G45130 | 35.533 | 197 | 113 | 5 | 12 | 205 | 22 | 207 | 9.25e-32 | 115 |
| MS.gene33386.t1 | AT1G73640 | 38.889 | 162 | 92 | 3 | 8 | 169 | 13 | 167 | 2.96e-31 | 114 |
| MS.gene33386.t1 | AT4G17170 | 37.654 | 162 | 94 | 3 | 8 | 169 | 6 | 160 | 5.66e-31 | 113 |
| MS.gene33386.t1 | AT5G47520 | 33.673 | 196 | 118 | 5 | 8 | 198 | 14 | 202 | 6.95e-31 | 113 |
| MS.gene33386.t1 | AT1G01200 | 36.420 | 162 | 97 | 2 | 8 | 169 | 28 | 183 | 1.45e-29 | 110 |
| MS.gene33386.t1 | AT3G54840 | 34.503 | 171 | 104 | 4 | 2 | 171 | 27 | 190 | 1.64e-29 | 108 |
| MS.gene33386.t1 | AT3G54840 | 33.702 | 181 | 112 | 4 | 2 | 181 | 27 | 200 | 1.74e-29 | 108 |
| MS.gene33386.t1 | AT3G54840 | 34.302 | 172 | 105 | 4 | 11 | 181 | 2 | 166 | 1.65e-28 | 105 |
| MS.gene33386.t1 | AT1G43890 | 36.416 | 173 | 102 | 5 | 8 | 179 | 13 | 178 | 2.45e-27 | 103 |
| MS.gene33386.t1 | AT1G43890 | 36.416 | 173 | 102 | 5 | 8 | 179 | 13 | 178 | 2.45e-27 | 103 |
| MS.gene33386.t1 | AT1G43890 | 36.416 | 173 | 102 | 5 | 8 | 179 | 13 | 178 | 2.45e-27 | 103 |
| MS.gene33386.t1 | AT5G03530 | 35.052 | 194 | 100 | 7 | 10 | 184 | 15 | 201 | 1.95e-26 | 101 |
| MS.gene33386.t1 | AT5G03530 | 35.052 | 194 | 100 | 7 | 10 | 184 | 15 | 201 | 1.95e-26 | 101 |
| MS.gene33386.t1 | AT4G19640 | 37.226 | 137 | 81 | 2 | 10 | 146 | 12 | 143 | 6.69e-26 | 98.2 |
| MS.gene33386.t1 | AT5G03520 | 42.424 | 132 | 70 | 3 | 44 | 175 | 41 | 166 | 2.18e-25 | 98.6 |
| MS.gene33386.t1 | AT4G19640 | 39.167 | 120 | 69 | 1 | 10 | 129 | 12 | 127 | 1.32e-24 | 95.9 |
| MS.gene33386.t1 | AT5G20020 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.04e-22 | 90.9 |
| MS.gene33386.t1 | AT5G55190 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.09e-22 | 90.9 |
| MS.gene33386.t1 | AT5G20010 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.13e-22 | 90.9 |
| MS.gene33386.t1 | AT5G59150 | 37.398 | 123 | 70 | 3 | 50 | 172 | 3 | 118 | 1.65e-21 | 87.0 |
| MS.gene33386.t1 | AT3G09910 | 34.302 | 172 | 105 | 5 | 9 | 179 | 14 | 178 | 3.39e-21 | 87.0 |
| MS.gene33386.t1 | AT3G09910 | 34.302 | 172 | 105 | 5 | 9 | 179 | 14 | 178 | 3.39e-21 | 87.0 |
| MS.gene33386.t1 | AT5G55080 | 28.916 | 166 | 108 | 3 | 9 | 174 | 14 | 169 | 6.06e-21 | 87.0 |
| MS.gene33386.t1 | AT4G35860 | 36.923 | 130 | 75 | 3 | 50 | 179 | 2 | 124 | 1.11e-20 | 85.1 |
| MS.gene33386.t1 | AT3G09910 | 34.337 | 166 | 101 | 5 | 9 | 173 | 14 | 172 | 1.53e-20 | 85.5 |
| MS.gene33386.t1 | AT3G09910 | 34.337 | 166 | 101 | 5 | 9 | 173 | 14 | 172 | 1.53e-20 | 85.5 |
| MS.gene33386.t1 | AT3G09910 | 34.337 | 166 | 101 | 5 | 9 | 173 | 14 | 172 | 1.53e-20 | 85.5 |
| MS.gene33386.t1 | AT4G28950 | 30.583 | 206 | 122 | 7 | 8 | 206 | 6 | 197 | 2.35e-20 | 85.1 |
| MS.gene33386.t1 | AT5G62880 | 31.551 | 187 | 113 | 5 | 1 | 178 | 1 | 181 | 1.15e-17 | 78.2 |
| MS.gene33386.t1 | AT3G48040 | 31.551 | 187 | 113 | 5 | 1 | 178 | 1 | 181 | 1.86e-17 | 77.4 |
| MS.gene33386.t1 | AT5G45970 | 28.889 | 180 | 113 | 5 | 8 | 178 | 6 | 179 | 4.86e-17 | 76.3 |
| MS.gene33386.t1 | AT1G20090 | 29.570 | 186 | 113 | 6 | 1 | 177 | 1 | 177 | 1.36e-16 | 75.1 |
| MS.gene33386.t1 | AT4G35020 | 28.877 | 187 | 116 | 5 | 1 | 178 | 1 | 179 | 5.90e-16 | 73.2 |
| MS.gene33386.t1 | AT4G35020 | 28.877 | 187 | 116 | 5 | 1 | 178 | 1 | 179 | 5.90e-16 | 73.2 |
| MS.gene33386.t1 | AT4G35020 | 28.877 | 187 | 116 | 5 | 1 | 178 | 1 | 179 | 5.90e-16 | 73.2 |
| MS.gene33386.t1 | AT5G62880 | 31.667 | 180 | 108 | 5 | 1 | 171 | 1 | 174 | 1.06e-15 | 72.4 |
| MS.gene33386.t1 | AT3G51300 | 29.032 | 186 | 115 | 6 | 1 | 177 | 1 | 178 | 1.53e-15 | 72.0 |
| MS.gene33386.t1 | AT1G75840 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 1.54e-15 | 72.0 |
| MS.gene33386.t1 | AT2G44690 | 29.240 | 171 | 106 | 5 | 8 | 169 | 18 | 182 | 2.20e-15 | 72.0 |
| MS.gene33386.t1 | AT3G48040 | 35.385 | 130 | 77 | 4 | 1 | 129 | 1 | 124 | 3.67e-15 | 70.9 |
| MS.gene33386.t1 | AT2G17800 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 8.07e-15 | 70.1 |
| MS.gene33386.t1 | AT2G17800 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 8.07e-15 | 70.1 |
| MS.gene33386.t1 | AT4G35950 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 1.10e-14 | 70.1 |
| MS.gene33386.t1 | AT5G09910 | 25.510 | 196 | 116 | 5 | 9 | 176 | 23 | 216 | 3.32e-14 | 70.5 |
| MS.gene33386.t1 | AT5G09910 | 25.510 | 196 | 116 | 5 | 9 | 176 | 23 | 216 | 3.32e-14 | 70.5 |
| MS.gene33386.t1 | AT4G35020 | 32.031 | 128 | 78 | 5 | 1 | 127 | 1 | 120 | 2.34e-12 | 62.4 |
| MS.gene33386.t1 | AT4G35020 | 32.031 | 128 | 78 | 5 | 1 | 127 | 1 | 120 | 2.34e-12 | 62.4 |
Find 46 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTCCCATTTGTTGTATT+GGG | 0.249578 | 4.2:-87799203 | MS.gene33386:CDS |
| AAAACTCACATTTCTTCTTC+AGG | 0.276765 | 4.2:+87798898 | None:intergenic |
| AAACTTCCCATTTGTTGTAT+TGG | 0.287627 | 4.2:-87799204 | MS.gene33386:CDS |
| GAGAGAAGAATTTCTCATTC+AGG | 0.301835 | 4.2:-87799348 | MS.gene33386:intron |
| TTTGCGGAGGTCTCAAAGTA+TGG | 0.329676 | 4.2:+87798982 | None:intergenic |
| TTGTTTCCCAATACAACAAA+TGG | 0.354677 | 4.2:+87799197 | None:intergenic |
| ATTCTTCTCTCCAATGGTTA+AGG | 0.368122 | 4.2:+87799360 | None:intergenic |
| AGACAGGTTGTTCACATTGC+AGG | 0.380730 | 4.2:-87800776 | MS.gene33386:intron |
| GTCTTGGTGTGGCTTTCTAC+CGG | 0.383425 | 4.2:-87799439 | MS.gene33386:CDS |
| GTCTTCAAATTGAACTTCCT+TGG | 0.388732 | 4.2:+87800795 | None:intergenic |
| GTCATCATCCTCGGTGATAG+TGG | 0.414536 | 4.2:-87801415 | MS.gene33386:CDS |
| TCTTGGTGTGGCTTTCTACC+GGG | 0.439363 | 4.2:-87799438 | MS.gene33386:CDS |
| AAAGGCATGGTGTGCTTCAA+AGG | 0.441249 | 4.2:-87799013 | MS.gene33386:CDS |
| CTTTCGAGAACCTTAACCAT+TGG | 0.448271 | 4.2:-87799370 | MS.gene33386:CDS |
| AGGAAGTTCAATTTGAAGAC+AGG | 0.464928 | 4.2:-87800792 | MS.gene33386:CDS |
| CAAGAGCGGTTTCAGAGTCT+TGG | 0.478744 | 4.2:-87799455 | MS.gene33386:CDS |
| GGAAACAAAATAGACGTTGA+TGG | 0.480216 | 4.2:-87799182 | MS.gene33386:CDS |
| TTTGAGACCTCCGCAAAAGA+AGG | 0.490684 | 4.2:-87798976 | MS.gene33386:CDS |
| TTACATTTAGGTATGTGAAT+CGG | 0.516552 | 4.2:-87800864 | MS.gene33386:intron |
| TGAGAAATTCTTCTCTCCAA+TGG | 0.527269 | 4.2:+87799354 | None:intergenic |
| TTGCCGACATCGATTGTGTC+GGG | 0.530187 | 4.2:+87798181 | None:intergenic |
| TGTTTCCCAATACAACAAAT+GGG | 0.537587 | 4.2:+87799198 | None:intergenic |
| ACAATCGATGTCGGCAATGG+TGG | 0.539871 | 4.2:-87798175 | MS.gene33386:CDS |
| AAGGCATGGTGTGCTTCAAA+GGG | 0.542588 | 4.2:-87799012 | MS.gene33386:CDS |
| CTCTACTCAACATTCACAGC+CGG | 0.553869 | 4.2:+87798135 | None:intergenic |
| AACAAAATAGACGTTGATGG+TGG | 0.573478 | 4.2:-87799179 | MS.gene33386:CDS |
| GACACAATCGATGTCGGCAA+TGG | 0.578998 | 4.2:-87798178 | MS.gene33386:CDS |
| AATCAGTACAAGGCTACCAT+TGG | 0.582311 | 4.2:-87800832 | MS.gene33386:CDS |
| CTTGGTGTGGCTTTCTACCG+GGG | 0.583346 | 4.2:-87799437 | MS.gene33386:CDS |
| ACACAGATTTGGGATACTGC+TGG | 0.585651 | 4.2:-87799479 | MS.gene33386:intron |
| ACAAAATAGACGTTGATGGT+GGG | 0.586912 | 4.2:-87799178 | MS.gene33386:CDS |
| GCGGTTTCAGAGTCTTGGTG+TGG | 0.587655 | 4.2:-87799450 | MS.gene33386:CDS |
| TTGTTAAAAGTCATCATCCT+CGG | 0.588262 | 4.2:-87801424 | MS.gene33386:CDS |
| GGACGACAACAGAGATCCAC+CGG | 0.593538 | 4.2:-87798154 | MS.gene33386:CDS |
| GGTGAGAAAATCAGCACCAA+TGG | 0.597199 | 4.2:+87800816 | None:intergenic |
| CTGAGAAGAAAGCAAAGGCA+TGG | 0.611252 | 4.2:-87799026 | MS.gene33386:CDS |
| TACTCAACATTCACAGCCGG+TGG | 0.616805 | 4.2:+87798138 | None:intergenic |
| TCATCATCCTCGGTGATAGT+GGG | 0.618638 | 4.2:-87801414 | MS.gene33386:intron |
| GGGATACTGCTGGTCAAGAG+CGG | 0.626594 | 4.2:-87799469 | MS.gene33386:CDS |
| GAAGTTTAGTAATCAGTACA+AGG | 0.630236 | 4.2:-87800842 | MS.gene33386:CDS |
| CTGCCCGACACAATCGATGT+CGG | 0.645647 | 4.2:-87798184 | MS.gene33386:CDS |
| ATTGCCGACATCGATTGTGT+CGG | 0.650688 | 4.2:+87798180 | None:intergenic |
| GGTTTCTGAGAAGAAAGCAA+AGG | 0.669924 | 4.2:-87799031 | MS.gene33386:CDS |
| TGACATTTACATCATAAACA+AGG | 0.673979 | 4.2:+87799399 | None:intergenic |
| GGACGCAGCAATCAGCACCC+CGG | 0.684255 | 4.2:+87799420 | None:intergenic |
| AAGCATACCCACTATCACCG+AGG | 0.790313 | 4.2:+87801407 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGTTATAAAATTAAAATT+TGG | - | chr4.2:87799817-87799836 | MS.gene33386:intron | 10.0% |
| !! | TATAAAATTAAAATTTGGAA+AGG | - | chr4.2:87799822-87799841 | MS.gene33386:intron | 10.0% |
| !! | ATAACATAATCTAATGAATA+AGG | + | chr4.2:87800926-87800945 | None:intergenic | 15.0% |
| !! | TAACAAAAAAAAAAAATGGT+TGG | + | chr4.2:87801122-87801141 | None:intergenic | 15.0% |
| !! | TCAAATTTAACAAAATTTGA+TGG | - | chr4.2:87798347-87798366 | MS.gene33386:intron | 15.0% |
| !! | TGGAAGAAAAAAAATAAAAT+TGG | + | chr4.2:87798226-87798245 | None:intergenic | 15.0% |
| !! | TTAAATTCAACACTAAAAAT+TGG | + | chr4.2:87798246-87798265 | None:intergenic | 15.0% |
| !! | TTCTTAAATAAAAAGAGATA+TGG | + | chr4.2:87800303-87800322 | None:intergenic | 15.0% |
| !!! | AAAATCAATAGTTGATTTTA+GGG | - | chr4.2:87800818-87800837 | MS.gene33386:CDS | 15.0% |
| !!! | ATTTTTTATGTGATGAAAAA+TGG | - | chr4.2:87798421-87798440 | MS.gene33386:intron | 15.0% |
| !!! | ATTTTTTTCCATTTACATTT+AGG | - | chr4.2:87798710-87798729 | MS.gene33386:intron | 15.0% |
| !!! | CATACTTTCATTTTTTTTTT+TGG | - | chr4.2:87798848-87798867 | MS.gene33386:intron | 15.0% |
| !!! | TTAAAAGGTCATATTTTTAT+TGG | - | chr4.2:87801260-87801279 | MS.gene33386:intron | 15.0% |
| !! | AAATTATATGTCGCAAATAA+GGG | - | chr4.2:87800501-87800520 | MS.gene33386:intron | 20.0% |
| !! | AATCTTAAATTATTCTAGGT+TGG | - | chr4.2:87801190-87801209 | MS.gene33386:intron | 20.0% |
| !! | ATAGAAGTAATATACAAAAC+TGG | + | chr4.2:87799507-87799526 | None:intergenic | 20.0% |
| !! | CATATCTATATAACAAATCA+TGG | - | chr4.2:87800841-87800860 | MS.gene33386:CDS | 20.0% |
| !! | CTTGAATCTTAAATTATTCT+AGG | - | chr4.2:87801186-87801205 | MS.gene33386:intron | 20.0% |
| !! | GAAAATTAAAATCCATGATT+TGG | + | chr4.2:87798629-87798648 | None:intergenic | 20.0% |
| !!! | AGTTGAAAAAACAATTTGTT+TGG | - | chr4.2:87799549-87799568 | MS.gene33386:intron | 20.0% |
| !!! | ATGTATTTGATTTGATTTTC+AGG | - | chr4.2:87800340-87800359 | MS.gene33386:intron | 20.0% |
| !!! | CATTGATTGAAAAAAGAAAA+GGG | - | chr4.2:87798289-87798308 | MS.gene33386:intron | 20.0% |
| !!! | GAAAATCAATAGTTGATTTT+AGG | - | chr4.2:87800817-87800836 | MS.gene33386:CDS | 20.0% |
| !!! | GATATGTTTTTATTTGTACT+TGG | - | chr4.2:87799627-87799646 | MS.gene33386:intron | 20.0% |
| !!! | TAACTTGTCTTTACTTTAAA+AGG | - | chr4.2:87801245-87801264 | MS.gene33386:intron | 20.0% |
| !!! | TCATTGATTGAAAAAAGAAA+AGG | - | chr4.2:87798288-87798307 | MS.gene33386:intron | 20.0% |
| !!! | TTTCATTTTCTTACTTTCAA+AGG | - | chr4.2:87800946-87800965 | MS.gene33386:intron | 20.0% |
| !!! | TTTTGTATATTACTTCTATC+TGG | - | chr4.2:87799508-87799527 | MS.gene33386:intron | 20.0% |
| !!! | TTTTTTGTATTTCTTTTGCA+GGG | - | chr4.2:87798572-87798591 | MS.gene33386:intron | 20.0% |
| !!! | TTTTTTTGTATTTCTTTTGC+AGG | - | chr4.2:87798571-87798590 | MS.gene33386:intron | 20.0% |
| ! | AAATGAGAGATTTACTTCAT+AGG | - | chr4.2:87800765-87800784 | MS.gene33386:intron | 25.0% |
| ! | AATGAGAGATTTACTTCATA+GGG | - | chr4.2:87800766-87800785 | MS.gene33386:intron | 25.0% |
| ! | ATCACTTTGTATGTAATCTA+AGG | - | chr4.2:87798926-87798945 | MS.gene33386:CDS | 25.0% |
| ! | ATTATGAACTTTGTTAACCT+CGG | - | chr4.2:87799690-87799709 | MS.gene33386:intron | 25.0% |
| ! | CAAATTATATGTCGCAAATA+AGG | - | chr4.2:87800500-87800519 | MS.gene33386:intron | 25.0% |
| ! | CACAATGTTTCGAATTATTT+GGG | + | chr4.2:87799090-87799109 | None:intergenic | 25.0% |
| ! | CTCATTTGAAGAATGTTTAT+CGG | - | chr4.2:87800979-87800998 | MS.gene33386:intron | 25.0% |
| ! | CTTATTTGCGACATATAATT+TGG | + | chr4.2:87800502-87800521 | None:intergenic | 25.0% |
| ! | GGTAAAATAAAGTGACATTA+TGG | - | chr4.2:87799016-87799035 | MS.gene33386:CDS | 25.0% |
| ! | TCACAATGTTTCGAATTATT+TGG | + | chr4.2:87799091-87799110 | None:intergenic | 25.0% |
| ! | TGACATTTACATCATAAACA+AGG | + | chr4.2:87800190-87800209 | None:intergenic | 25.0% |
| ! | TGATATGCATAAACAAAACA+TGG | + | chr4.2:87800720-87800739 | None:intergenic | 25.0% |
| ! | TGATATTCTCATTAACAGTT+GGG | - | chr4.2:87800885-87800904 | MS.gene33386:intron | 25.0% |
| ! | TGATTTCACAACAAATAACT+AGG | + | chr4.2:87799859-87799878 | None:intergenic | 25.0% |
| ! | TTACATTTAGGTATGTGAAT+CGG | - | chr4.2:87798722-87798741 | MS.gene33386:intron | 25.0% |
| ! | TTATGCATATCATTAGTCAT+TGG | - | chr4.2:87800728-87800747 | MS.gene33386:intron | 25.0% |
| ! | TTCACATACCTAAATGTAAA+TGG | + | chr4.2:87798721-87798740 | None:intergenic | 25.0% |
| ! | TTGATATTCTCATTAACAGT+TGG | - | chr4.2:87800884-87800903 | MS.gene33386:intron | 25.0% |
| !! | AACATTAAATCCTTCTTTTG+CGG | + | chr4.2:87800623-87800642 | None:intergenic | 25.0% |
| !! | AAGTAAATCTCTCATTTTAG+AGG | + | chr4.2:87800762-87800781 | None:intergenic | 25.0% |
| !! | ATTTGATAACCATGATCAAA+AGG | - | chr4.2:87801345-87801364 | MS.gene33386:intron | 25.0% |
| !!! | TGTTAATTTTTTGTTCAGCT+AGG | - | chr4.2:87801137-87801156 | MS.gene33386:intron | 25.0% |
| !!! | TTGATGGATTTTTGATTCAA+GGG | - | chr4.2:87798363-87798382 | MS.gene33386:intron | 25.0% |
| !!! | TTTGATGGATTTTTGATTCA+AGG | - | chr4.2:87798362-87798381 | MS.gene33386:intron | 25.0% |
| AAAACTCACATTTCTTCTTC+AGG | + | chr4.2:87800691-87800710 | None:intergenic | 30.0% | |
| CAACAGTACGTTATTTACAT+CGG | + | chr4.2:87800070-87800089 | None:intergenic | 30.0% | |
| CACTAAATTTGAGAATATCC+TGG | + | chr4.2:87800008-87800027 | None:intergenic | 30.0% | |
| CTAATTGTACACACAGATTT+GGG | - | chr4.2:87800097-87800116 | MS.gene33386:intron | 30.0% | |
| GAAGTTTAGTAATCAGTACA+AGG | - | chr4.2:87798744-87798763 | MS.gene33386:intron | 30.0% | |
| TAACCGAATACTCAAAGTTT+GGG | + | chr4.2:87799199-87799218 | None:intergenic | 30.0% | |
| TAATTCGAAACATTGTGATC+CGG | - | chr4.2:87799093-87799112 | MS.gene33386:intron | 30.0% | |
| TCAATATGCAATTATGCCAT+TGG | + | chr4.2:87800462-87800481 | None:intergenic | 30.0% | |
| TCTAATTGTACACACAGATT+TGG | - | chr4.2:87800096-87800115 | MS.gene33386:intron | 30.0% | |
| TGTTTCCCAATACAACAAAT+GGG | + | chr4.2:87800391-87800410 | None:intergenic | 30.0% | |
| TTAACCGAATACTCAAAGTT+TGG | + | chr4.2:87799200-87799219 | None:intergenic | 30.0% | |
| TTACTTCATAGGGTTAACTA+AGG | - | chr4.2:87800776-87800795 | MS.gene33386:intron | 30.0% | |
| TTGTTAAAAGTCATCATCCT+CGG | - | chr4.2:87798162-87798181 | MS.gene33386:CDS | 30.0% | |
| TTGTTTCCCAATACAACAAA+TGG | + | chr4.2:87800392-87800411 | None:intergenic | 30.0% | |
| ! | GTTTCTTGTTTGCATTTACA+CGG | - | chr4.2:87798994-87799013 | MS.gene33386:CDS | 30.0% |
| ! | TCATTACTATCTTCTTTTGC+AGG | - | chr4.2:87800534-87800553 | MS.gene33386:intron | 30.0% |
| ! | TTTCTTGTTTGCATTTACAC+GGG | - | chr4.2:87798995-87799014 | MS.gene33386:CDS | 30.0% |
| !! | AAACTTCCCATTTGTTGTAT+TGG | - | chr4.2:87800382-87800401 | MS.gene33386:intron | 30.0% |
| !! | AACTTCCCATTTGTTGTATT+GGG | - | chr4.2:87800383-87800402 | MS.gene33386:intron | 30.0% |
| !! | TCAATTGACTTGTTTGAAGA+CGG | + | chr4.2:87799153-87799172 | None:intergenic | 30.0% |
| !! | TTTTTCAACTTCAGAAACTC+AGG | + | chr4.2:87799539-87799558 | None:intergenic | 30.0% |
| !!! | CAGATTGTTTTAAACGGAAA+AGG | + | chr4.2:87799470-87799489 | None:intergenic | 30.0% |
| AACCCCAAACTTTGAGTATT+CGG | - | chr4.2:87799193-87799212 | MS.gene33386:CDS | 35.0% | |
| AACCGAATACTCAAAGTTTG+GGG | + | chr4.2:87799198-87799217 | None:intergenic | 35.0% | |
| AGGAAGTTCAATTTGAAGAC+AGG | - | chr4.2:87798794-87798813 | MS.gene33386:intron | 35.0% | |
| ATGATCAAAAGGCTAAAGTG+TGG | - | chr4.2:87801356-87801375 | MS.gene33386:intron | 35.0% | |
| ATTCTTCTCTCCAATGGTTA+AGG | + | chr4.2:87800229-87800248 | None:intergenic | 35.0% | |
| GAAAGATCAGTGTGTATGTT+TGG | - | chr4.2:87799966-87799985 | MS.gene33386:intron | 35.0% | |
| GAATCAGTATGTCCAAATCA+TGG | - | chr4.2:87798614-87798633 | MS.gene33386:intron | 35.0% | |
| GAGAGAAGAATTTCTCATTC+AGG | - | chr4.2:87800238-87800257 | MS.gene33386:intron | 35.0% | |
| GGAAACAAAATAGACGTTGA+TGG | - | chr4.2:87800404-87800423 | MS.gene33386:intron | 35.0% | |
| GTAACCAGAAACTCAAAGTA+CGG | + | chr4.2:87799335-87799354 | None:intergenic | 35.0% | |
| GTAATATACAAAACTGGACC+TGG | + | chr4.2:87799501-87799520 | None:intergenic | 35.0% | |
| GTCTTCAAATTGAACTTCCT+TGG | + | chr4.2:87798794-87798813 | None:intergenic | 35.0% | |
| TAACCAGAAACTCAAAGTAC+GGG | + | chr4.2:87799334-87799353 | None:intergenic | 35.0% | |
| TCAAAGTTAGCTCAAGTGAA+AGG | - | chr4.2:87799798-87799817 | MS.gene33386:intron | 35.0% | |
| TCGAGATTCAAACTGTGAAT+TGG | + | chr4.2:87801326-87801345 | None:intergenic | 35.0% | |
| TGAGAAATTCTTCTCTCCAA+TGG | + | chr4.2:87800235-87800254 | None:intergenic | 35.0% | |
| TTCCTAGAGTTGTGATGTTA+TGG | + | chr4.2:87799246-87799265 | None:intergenic | 35.0% | |
| ! | AACAAAATAGACGTTGATGG+TGG | - | chr4.2:87800407-87800426 | MS.gene33386:intron | 35.0% |
| ! | ACAACAAATGGGAAGTTTTC+AGG | + | chr4.2:87800380-87800399 | None:intergenic | 35.0% |
| ! | ATTAAATCCTTCTTTTGCGG+AGG | + | chr4.2:87800620-87800639 | None:intergenic | 35.0% |
| ! | CAACAAATGGGAAGTTTTCA+GGG | + | chr4.2:87800379-87800398 | None:intergenic | 35.0% |
| ! | TTGTATTTCTTTTGCAGGGT+TGG | - | chr4.2:87798576-87798595 | MS.gene33386:intron | 35.0% |
| !! | AAGAAACTCGAGTTGAAAAC+AGG | + | chr4.2:87798981-87799000 | None:intergenic | 35.0% |
| !! | ACAAAATAGACGTTGATGGT+GGG | - | chr4.2:87800408-87800427 | MS.gene33386:intron | 35.0% |
| !! | ACACTTTAGCCTTTTGATCA+TGG | + | chr4.2:87801357-87801376 | None:intergenic | 35.0% |
| !! | CAATTGACTTGTTTGAAGAC+GGG | + | chr4.2:87799152-87799171 | None:intergenic | 35.0% |
| !!! | GTGCATTTTTTGCTATACAC+TGG | + | chr4.2:87800657-87800676 | None:intergenic | 35.0% |
| AACCAGAAACTCAAAGTACG+GGG | + | chr4.2:87799333-87799352 | None:intergenic | 40.0% | |
| AATCAGTACAAGGCTACCAT+TGG | - | chr4.2:87798754-87798773 | MS.gene33386:intron | 40.0% | |
| AGCCATAACATCACAACTCT+AGG | - | chr4.2:87799241-87799260 | MS.gene33386:intron | 40.0% | |
| ATGATAGTTGACGATGGTTG+TGG | - | chr4.2:87799922-87799941 | MS.gene33386:intron | 40.0% | |
| CTCATTAACAGTTGGGATAG+CGG | - | chr4.2:87800892-87800911 | MS.gene33386:intron | 40.0% | |
| CTTTCGAGAACCTTAACCAT+TGG | - | chr4.2:87800216-87800235 | MS.gene33386:intron | 40.0% | |
| GAACATTCCTAGAGTTGTGA+TGG | + | chr4.2:87799251-87799270 | None:intergenic | 40.0% | |
| GAATGCATTTCCGAAAAGAC+CGG | + | chr4.2:87799115-87799134 | None:intergenic | 40.0% | |
| GAGTTGAAAACAGGCTCTTA+TGG | + | chr4.2:87798972-87798991 | None:intergenic | 40.0% | |
| GATTCAATCCTCAACGGAAA+TGG | - | chr4.2:87799437-87799456 | MS.gene33386:CDS | 40.0% | |
| GGAACAAATCCATCCTTTCA+CGG | + | chr4.2:87799296-87799315 | None:intergenic | 40.0% | |
| GGTTTACGAGATAGGTGTTT+GGG | + | chr4.2:87799177-87799196 | None:intergenic | 40.0% | |
| GTAAGTTACTCCTCTTCCAA+TGG | - | chr4.2:87800443-87800462 | MS.gene33386:intron | 40.0% | |
| GTTCAAAAGCGATACACACT+AGG | + | chr4.2:87801063-87801082 | None:intergenic | 40.0% | |
| TGCAATTATGCCATTGGAAG+AGG | + | chr4.2:87800456-87800475 | None:intergenic | 40.0% | |
| TTGTGCATGATAGTTGACGA+TGG | - | chr4.2:87799916-87799935 | MS.gene33386:intron | 40.0% | |
| ! | AAGTTTGGGGTTTACGAGAT+AGG | + | chr4.2:87799185-87799204 | None:intergenic | 40.0% |
| ! | ACATTGTGATCCGGTCTTTT+CGG | - | chr4.2:87799102-87799121 | MS.gene33386:intron | 40.0% |
| ! | AGGATGGATTCAATCCTCAA+CGG | - | chr4.2:87799431-87799450 | MS.gene33386:CDS | 40.0% |
| ! | CCGTTTAAAACAATCTGCTG+CGG | - | chr4.2:87799473-87799492 | MS.gene33386:CDS | 40.0% |
| ! | GGTTTCTGAGAAGAAAGCAA+AGG | - | chr4.2:87800555-87800574 | MS.gene33386:intron | 40.0% |
| ! | TGGTGTCTGTTGATTATACC+AGG | - | chr4.2:87801376-87801395 | MS.gene33386:intron | 40.0% |
| !! | GATACACACTAGGTATCGAA+TGG | + | chr4.2:87801053-87801072 | None:intergenic | 40.0% |
| !!! | CCGCAGCAGATTGTTTTAAA+CGG | + | chr4.2:87799476-87799495 | None:intergenic | 40.0% |
| !!! | GGCTGTGTTTATTTTTTGCC+AGG | - | chr4.2:87799987-87800006 | MS.gene33386:intron | 40.0% |
| AAGGCATGGTGTGCTTCAAA+GGG | - | chr4.2:87800574-87800593 | MS.gene33386:intron | 45.0% | |
| AGACAGGTTGTTCACATTGC+AGG | - | chr4.2:87798810-87798829 | MS.gene33386:intron | 45.0% | |
| CTGAGAAGAAAGCAAAGGCA+TGG | - | chr4.2:87800560-87800579 | MS.gene33386:intron | 45.0% | |
| GATCAGAACCATTTCCGTTG+AGG | + | chr4.2:87799448-87799467 | None:intergenic | 45.0% | |
| GCTGACTAAATGCGAGTAGA+AGG | + | chr4.2:87799224-87799243 | None:intergenic | 45.0% | |
| GGATTGAATCCATCCTTTCG+CGG | + | chr4.2:87799427-87799446 | None:intergenic | 45.0% | |
| GGGTTTACGAGATAGGTGTT+TGG | + | chr4.2:87799178-87799197 | None:intergenic | 45.0% | |
| GGTGAGAAAATCAGCACCAA+TGG | + | chr4.2:87798773-87798792 | None:intergenic | 45.0% | |
| TCATCATCCTCGGTGATAGT+GGG | - | chr4.2:87798172-87798191 | MS.gene33386:CDS | 45.0% | |
| TTTGCGGAGGTCTCAAAGTA+TGG | + | chr4.2:87800607-87800626 | None:intergenic | 45.0% | |
| ! | AAAGGCATGGTGTGCTTCAA+AGG | - | chr4.2:87800573-87800592 | MS.gene33386:intron | 45.0% |
| ! | AACCCCGTACTTTGAGTTTC+TGG | - | chr4.2:87799328-87799347 | MS.gene33386:intron | 45.0% |
| ! | ACACAGATTTGGGATACTGC+TGG | - | chr4.2:87800107-87800126 | MS.gene33386:intron | 45.0% |
| ! | ATTGCCGACATCGATTGTGT+CGG | + | chr4.2:87801409-87801428 | None:intergenic | 45.0% |
| ! | TTTGAGACCTCCGCAAAAGA+AGG | - | chr4.2:87800610-87800629 | MS.gene33386:intron | 45.0% |
| !!! | TGGTGCTGATTTTCTCACCA+AGG | - | chr4.2:87798774-87798793 | MS.gene33386:intron | 45.0% |
| !! | AAATTAACAAAAAAAAAAAA+TGG | + | chr4.2:87801126-87801145 | None:intergenic | 5.0% |
| AAACAATCTGCTGCGGATCC+AGG | - | chr4.2:87799480-87799499 | MS.gene33386:intron | 50.0% | |
| AAGCATACCCACTATCACCG+AGG | + | chr4.2:87798182-87798201 | None:intergenic | 50.0% | |
| ACAATCGATGTCGGCAATGG+TGG | - | chr4.2:87801411-87801430 | MS.gene33386:intron | 50.0% | |
| CAAGAGCGGTTTCAGAGTCT+TGG | - | chr4.2:87800131-87800150 | MS.gene33386:intron | 50.0% | |
| GACACAATCGATGTCGGCAA+TGG | - | chr4.2:87801408-87801427 | MS.gene33386:intron | 50.0% | |
| GTCATCATCCTCGGTGATAG+TGG | - | chr4.2:87798171-87798190 | MS.gene33386:CDS | 50.0% | |
| TACGGGGTTTACGCGATTTC+AGG | + | chr4.2:87799317-87799336 | None:intergenic | 50.0% | |
| TTGAATCCATCCTTTCGCGG+CGG | + | chr4.2:87799424-87799443 | None:intergenic | 50.0% | |
| ! | GTCTTGGTGTGGCTTTCTAC+CGG | - | chr4.2:87800147-87800166 | MS.gene33386:intron | 50.0% |
| ! | GTTAACCTCGGCTGCTTTGA+CGG | - | chr4.2:87799702-87799721 | MS.gene33386:intron | 50.0% |
| ! | TCTTGGTGTGGCTTTCTACC+GGG | - | chr4.2:87800148-87800167 | MS.gene33386:intron | 50.0% |
| ! | TTAACCTCGGCTGCTTTGAC+GGG | - | chr4.2:87799703-87799722 | MS.gene33386:intron | 50.0% |
| ! | TTCCTAGAGTTGTGATGGCG+TGG | + | chr4.2:87799377-87799396 | None:intergenic | 50.0% |
| ! | TTGCCGACATCGATTGTGTC+GGG | + | chr4.2:87801408-87801427 | None:intergenic | 50.0% |
| !! | GGGAAGTTTTCAGGGTCAGA+TGG | + | chr4.2:87800371-87800390 | None:intergenic | 50.0% |
| AGCCACGCCATCACAACTCT+AGG | - | chr4.2:87799372-87799391 | MS.gene33386:CDS | 55.0% | |
| CTGCCCGACACAATCGATGT+CGG | - | chr4.2:87801402-87801421 | MS.gene33386:intron | 55.0% | |
| GATTGTGTCGGGCAGATACC+TGG | + | chr4.2:87801397-87801416 | None:intergenic | 55.0% | |
| GCGGTTTCAGAGTCTTGGTG+TGG | - | chr4.2:87800136-87800155 | MS.gene33386:intron | 55.0% | |
| GGACGACAACAGAGATCCAC+CGG | - | chr4.2:87801432-87801451 | MS.gene33386:CDS | 55.0% | |
| GGCGACACGTAAGACAGTGA+AGG | + | chr4.2:87799275-87799294 | None:intergenic | 55.0% | |
| GGGATACTGCTGGTCAAGAG+CGG | - | chr4.2:87800117-87800136 | MS.gene33386:intron | 55.0% | |
| GTCTTACGTGTCGCCGTGAA+AGG | - | chr4.2:87799280-87799299 | MS.gene33386:intron | 55.0% | |
| TACGTGTCGCCGTGAAAGGA+TGG | - | chr4.2:87799284-87799303 | MS.gene33386:intron | 55.0% | |
| ! | CTTGGTGTGGCTTTCTACCG+GGG | - | chr4.2:87800149-87800168 | MS.gene33386:intron | 55.0% |
| ! | TTTTCCCGTCAAAGCAGCCG+AGG | + | chr4.2:87799710-87799729 | None:intergenic | 55.0% |
| ATCCTTTCGCGGCGGCGCAT+AGG | + | chr4.2:87799416-87799435 | None:intergenic | 65.0% | |
| GGACGCAGCAATCAGCACCC+CGG | + | chr4.2:87800169-87800188 | None:intergenic | 65.0% | |
| TATGCGCCGCCGCGAAAGGA+TGG | - | chr4.2:87799415-87799434 | MS.gene33386:CDS | 65.0% | |
| TCCTTTCGCGGCGGCGCATA+GGG | + | chr4.2:87799415-87799434 | None:intergenic | 65.0% | |
| GGCGGCGCATAGGGCAGTGA+AGG | + | chr4.2:87799406-87799425 | None:intergenic | 70.0% | |
| GCCCTATGCGCCGCCGCGAA+AGG | - | chr4.2:87799411-87799430 | MS.gene33386:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 87798141 | 87801467 | 87798141 | ID=MS.gene33386 |
| chr4.2 | mRNA | 87798141 | 87801467 | 87798141 | ID=MS.gene33386.t1;Parent=MS.gene33386 |
| chr4.2 | exon | 87801415 | 87801467 | 87801415 | ID=MS.gene33386.t1.exon1;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87801415 | 87801467 | 87801415 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| chr4.2 | exon | 87800989 | 87801015 | 87800989 | ID=MS.gene33386.t1.exon2;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87800989 | 87801015 | 87800989 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| chr4.2 | exon | 87800777 | 87800876 | 87800777 | ID=MS.gene33386.t1.exon3;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87800777 | 87800876 | 87800777 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| chr4.2 | exon | 87799349 | 87799495 | 87799349 | ID=MS.gene33386.t1.exon4;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87799349 | 87799495 | 87799349 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| chr4.2 | exon | 87799166 | 87799246 | 87799166 | ID=MS.gene33386.t1.exon5;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87799166 | 87799246 | 87799166 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| chr4.2 | exon | 87798907 | 87799052 | 87798907 | ID=MS.gene33386.t1.exon6;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87798907 | 87799052 | 87798907 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| chr4.2 | exon | 87798141 | 87798210 | 87798141 | ID=MS.gene33386.t1.exon7;Parent=MS.gene33386.t1 |
| chr4.2 | CDS | 87798141 | 87798210 | 87798141 | ID=cds.MS.gene33386.t1;Parent=MS.gene33386.t1 |
| Gene Sequence |
| Protein sequence |
