AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003158

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003158.t1 MTR_2g027660 100.000 211 0 0 1 211 1 211 7.47e-160 440
MS.gene003158.t1 MTR_6g021790 88.626 211 24 0 1 211 1 211 5.84e-140 390
MS.gene003158.t1 MTR_8g031680 68.720 211 65 1 1 211 1 210 5.91e-105 301
MS.gene003158.t1 MTR_8g031660 66.351 211 66 1 1 211 1 206 3.48e-104 299
MS.gene003158.t1 MTR_8g031870 78.049 164 36 0 1 164 1 164 6.10e-95 275
MS.gene003158.t1 MTR_8g031830 64.019 214 58 3 1 211 1 198 1.53e-94 274
MS.gene003158.t1 MTR_2g014990 48.095 210 105 2 3 211 10 216 2.54e-66 203
MS.gene003158.t1 MTR_4g088090 47.619 210 106 2 3 211 10 216 1.95e-65 201
MS.gene003158.t1 MTR_2g005510 53.073 179 84 0 3 181 12 190 1.31e-64 199
MS.gene003158.t1 MTR_4g079350 47.143 210 107 2 3 211 10 216 1.94e-64 199
MS.gene003158.t1 MTR_2g075950 46.479 213 104 2 3 211 10 216 2.58e-64 198
MS.gene003158.t1 MTR_1g052475 50.000 178 89 0 5 182 14 191 9.88e-64 197
MS.gene003158.t1 MTR_2g083860 55.621 169 75 0 3 171 10 178 2.48e-63 196
MS.gene003158.t1 MTR_0262s0050 53.333 165 77 0 5 169 14 178 4.85e-63 195
MS.gene003158.t1 MTR_2g090865 46.009 213 104 2 3 211 8 213 1.26e-61 191
MS.gene003158.t1 MTR_7g081700 45.933 209 101 1 3 211 5 201 3.27e-61 190
MS.gene003158.t1 MTR_4g064897 45.755 212 106 3 3 211 9 214 6.11e-61 189
MS.gene003158.t1 MTR_1g115325 46.890 209 104 3 3 210 12 214 6.89e-61 189
MS.gene003158.t1 MTR_8g089985 44.444 216 102 4 5 210 16 223 8.33e-61 189
MS.gene003158.t1 MTR_3g069510 46.226 212 106 2 3 211 9 215 9.43e-61 189
MS.gene003158.t1 MTR_3g086980 46.193 197 101 2 5 196 15 211 2.33e-60 188
MS.gene003158.t1 MTR_7g405790 43.541 209 114 2 5 211 14 220 5.86e-59 185
MS.gene003158.t1 MTR_7g100020 49.733 187 91 2 3 188 12 196 6.58e-59 184
MS.gene003158.t1 MTR_1g068740 45.455 209 107 4 3 210 12 214 7.75e-59 184
MS.gene003158.t1 MTR_8g006970 53.333 165 77 0 3 167 5 169 1.26e-58 182
MS.gene003158.t1 MTR_1g068730 44.976 209 108 4 3 210 12 214 2.83e-58 183
MS.gene003158.t1 MTR_8g006970 46.377 207 100 2 5 211 21 216 4.27e-58 182
MS.gene003158.t1 MTR_2g005500 50.296 169 84 0 3 171 6 174 5.15e-58 182
MS.gene003158.t1 MTR_8g036220 51.829 164 79 0 5 168 15 178 6.79e-58 182
MS.gene003158.t1 MTR_7g051940 44.928 207 111 1 5 211 12 215 1.09e-57 181
MS.gene003158.t1 MTR_8g027220 53.165 158 74 0 5 162 25 182 7.36e-57 180
MS.gene003158.t1 MTR_6g079550 45.894 207 110 1 5 211 11 215 5.01e-56 177
MS.gene003158.t1 MTR_1g078200 43.128 211 116 1 5 211 13 223 7.12e-56 177
MS.gene003158.t1 MTR_4g063160 45.024 211 106 4 3 210 12 215 8.83e-56 176
MS.gene003158.t1 MTR_8g107070 48.223 197 93 2 5 200 13 201 3.37e-52 169
MS.gene003158.t1 MTR_2g096550 45.714 175 93 2 2 174 11 185 4.55e-51 164
MS.gene003158.t1 MTR_7g103070 45.455 209 99 6 7 211 17 214 3.00e-50 162
MS.gene003158.t1 MTR_8g093740 42.925 212 104 6 3 210 10 208 5.03e-50 162
MS.gene003158.t1 MTR_1g029450 42.925 212 107 6 3 211 14 214 9.73e-49 159
MS.gene003158.t1 MTR_3g096350 49.375 160 78 3 3 160 9 167 2.32e-48 157
MS.gene003158.t1 MTR_8g031810 67.890 109 21 1 1 109 1 95 2.60e-48 153
MS.gene003158.t1 MTR_8g103550 43.210 162 92 0 8 169 11 172 7.62e-48 155
MS.gene003158.t1 MTR_7g117910 50.704 142 70 0 5 146 19 160 5.03e-47 154
MS.gene003158.t1 MTR_3g064390 43.312 157 89 0 8 164 12 168 1.04e-46 153
MS.gene003158.t1 MTR_2g102060 43.791 153 86 0 8 160 12 164 1.18e-46 153
MS.gene003158.t1 MTR_4g099470 43.678 174 86 1 38 211 16 177 1.38e-46 152
MS.gene003158.t1 MTR_5g076590 42.500 160 92 0 8 167 12 171 3.56e-46 151
MS.gene003158.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 3.96e-46 151
MS.gene003158.t1 MTR_1g094220 41.772 158 91 1 8 164 33 190 4.16e-46 151
MS.gene003158.t1 MTR_1g090717 49.693 163 77 4 2 160 11 172 5.70e-46 151
MS.gene003158.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 8.17e-46 151
MS.gene003158.t1 MTR_1g062760 48.235 170 83 4 3 169 11 178 1.42e-45 150
MS.gene003158.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 1.74e-45 151
MS.gene003158.t1 MTR_1g068730 53.543 127 59 0 3 129 12 138 6.71e-45 147
MS.gene003158.t1 MTR_1g068740 53.543 127 59 0 3 129 12 138 8.53e-45 148
MS.gene003158.t1 MTR_4g098950 34.286 210 119 2 7 210 10 206 6.00e-44 146
MS.gene003158.t1 MTR_8g090215 38.509 161 99 0 7 167 10 170 4.01e-43 144
MS.gene003158.t1 MTR_3g087160 35.912 181 111 1 7 182 10 190 9.78e-43 143
MS.gene003158.t1 MTR_5g013900 36.264 182 110 1 7 182 10 191 3.93e-42 141
MS.gene003158.t1 MTR_8g093740 41.243 177 88 5 38 210 11 175 1.18e-37 129
MS.gene003158.t1 MTR_3g096350 45.578 147 77 3 3 147 9 154 3.46e-37 127
MS.gene003158.t1 MTR_7g103070 42.353 170 81 4 47 211 1 158 1.60e-36 125
MS.gene003158.t1 MTR_3g096350 50.820 122 57 3 3 122 9 129 2.07e-36 125
MS.gene003158.t1 MTR_4g069850 36.683 199 116 4 6 197 8 203 2.88e-34 121
MS.gene003158.t1 MTR_8g092020 37.952 166 96 2 6 164 12 177 6.68e-34 120
MS.gene003158.t1 MTR_3g064390 40.800 125 74 0 8 132 12 136 1.20e-33 118
MS.gene003158.t1 MTR_1g097420 34.597 211 118 6 6 209 8 205 3.21e-33 119
MS.gene003158.t1 MTR_6g039490 38.095 168 97 3 6 166 8 175 1.10e-31 115
MS.gene003158.t1 MTR_2g101890 37.654 162 94 3 6 160 10 171 1.92e-31 114
MS.gene003158.t1 MTR_4g012940 37.654 162 94 3 6 160 8 169 5.28e-31 113
MS.gene003158.t1 MTR_2g005500 35.503 169 69 1 3 171 6 134 4.13e-29 107
MS.gene003158.t1 MTR_1g097420 33.333 210 118 7 7 209 38 232 4.84e-28 106
MS.gene003158.t1 MTR_2g090875 31.977 172 103 5 1 160 1 170 4.68e-25 97.4
MS.gene003158.t1 MTR_6g087980 32.558 172 102 5 1 160 1 170 4.54e-24 95.1
MS.gene003158.t1 MTR_4g088055 31.395 172 104 5 1 160 1 170 7.80e-24 94.0
MS.gene003158.t1 MTR_4g073250 32.558 172 102 6 1 160 1 170 1.99e-22 90.5
MS.gene003158.t1 MTR_3g078260 30.168 179 111 5 6 172 8 184 1.55e-21 88.6
MS.gene003158.t1 MTR_3g107707 31.646 158 105 2 7 164 14 168 3.65e-21 87.8
MS.gene003158.t1 MTR_3g107717 31.646 158 105 2 7 164 14 168 3.80e-21 87.8
MS.gene003158.t1 MTR_3g107713 31.646 158 105 2 7 164 14 168 4.27e-21 87.4
MS.gene003158.t1 MTR_8g075240 28.488 172 109 5 1 160 1 170 1.14e-20 85.9
MS.gene003158.t1 MTR_5g022600 27.907 172 110 5 1 160 1 170 5.94e-20 84.0
MS.gene003158.t1 MTR_1452s0010 38.043 92 57 0 26 117 1 92 7.96e-18 75.9
MS.gene003158.t1 MTR_1686s0010 35.870 92 59 0 26 117 1 92 1.04e-16 72.8
MS.gene003158.t1 MTR_2g078000 45.902 61 28 1 68 128 47 102 2.87e-14 66.6
MS.gene003158.t1 MTR_4g113620 27.329 161 105 3 7 167 14 162 3.56e-14 68.9
MS.gene003158.t1 MTR_3g078260 29.310 116 79 3 6 120 8 121 1.03e-13 66.2
MS.gene003158.t1 MTR_1g069245 45.333 75 40 1 38 112 125 198 1.57e-13 67.4
MS.gene003158.t1 MTR_1g059590 32.075 159 98 5 2 160 427 575 4.03e-12 65.1
MS.gene003158.t1 MTR_1g059590 32.075 159 98 5 2 160 394 542 4.04e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003158.t1 AT4G17170 97.143 210 6 0 1 210 1 210 7.64e-155 427
MS.gene003158.t1 AT4G35860 85.238 210 31 0 1 210 1 210 1.25e-136 381
MS.gene003158.t1 AT4G17160 78.673 211 37 2 1 210 1 204 8.15e-121 341
MS.gene003158.t1 AT4G35860 81.707 164 30 0 47 210 1 164 1.50e-100 288
MS.gene003158.t1 AT5G45750 46.479 213 103 2 3 211 10 215 7.10e-66 202
MS.gene003158.t1 AT5G60860 48.095 210 105 2 3 211 10 216 8.82e-66 202
MS.gene003158.t1 AT3G12160 47.393 211 101 2 5 210 14 219 2.30e-64 199
MS.gene003158.t1 AT4G18430 48.095 210 105 2 3 211 10 216 3.63e-64 198
MS.gene003158.t1 AT3G15060 47.368 209 108 1 3 211 10 216 7.95e-64 197
MS.gene003158.t1 AT2G33870 47.664 214 101 3 3 211 10 217 1.28e-63 196
MS.gene003158.t1 AT5G47960 48.077 208 105 2 5 210 14 220 3.99e-63 196
MS.gene003158.t1 AT1G28550 47.664 214 101 3 3 211 10 217 4.34e-63 195
MS.gene003158.t1 AT1G06400 47.418 213 101 2 3 211 10 215 1.64e-62 194
MS.gene003158.t1 AT4G39990 46.698 212 103 3 5 211 16 222 2.25e-62 194
MS.gene003158.t1 AT1G07410 45.755 212 105 2 3 211 9 213 3.31e-62 193
MS.gene003158.t1 AT4G18800 45.972 211 105 2 3 211 10 213 4.64e-62 192
MS.gene003158.t1 AT1G16920 53.293 167 78 0 3 169 10 176 7.72e-62 192
MS.gene003158.t1 AT1G02130 45.933 209 102 1 3 211 5 202 1.22e-61 191
MS.gene003158.t1 AT4G17530 46.411 209 100 2 3 211 5 201 1.45e-61 191
MS.gene003158.t1 AT1G09630 45.455 209 112 1 3 211 9 215 3.11e-61 191
MS.gene003158.t1 AT5G65270 46.479 213 106 3 5 211 16 226 1.00e-60 189
MS.gene003158.t1 AT3G46830 53.846 169 78 0 3 171 9 177 1.04e-60 189
MS.gene003158.t1 AT3G46830 53.846 169 78 0 3 171 9 177 1.04e-60 189
MS.gene003158.t1 AT5G59150 45.755 212 108 2 3 211 9 216 7.23e-60 187
MS.gene003158.t1 AT3G11730 47.847 209 98 3 3 210 5 203 8.13e-60 186
MS.gene003158.t1 AT5G47200 45.933 209 101 2 3 211 5 201 8.43e-60 186
MS.gene003158.t1 AT3G09900 45.714 210 108 3 3 211 12 216 9.41e-59 184
MS.gene003158.t1 AT5G59840 46.411 209 105 3 3 210 12 214 2.36e-58 183
MS.gene003158.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene003158.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene003158.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene003158.t1 AT2G43130 45.411 207 109 2 5 211 11 213 3.11e-58 183
MS.gene003158.t1 AT5G03520 45.714 210 106 3 3 211 12 214 3.89e-58 182
MS.gene003158.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene003158.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene003158.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene003158.t1 AT5G47520 46.047 215 101 3 5 211 13 220 1.03e-56 179
MS.gene003158.t1 AT3G07410 43.961 207 115 1 5 211 11 216 1.60e-56 178
MS.gene003158.t1 AT1G05810 42.788 208 116 2 5 211 11 216 3.28e-56 178
MS.gene003158.t1 AT2G31680 44.019 209 113 2 5 211 11 217 4.48e-56 177
MS.gene003158.t1 AT1G05810 42.788 208 116 2 5 211 57 262 8.57e-56 178
MS.gene003158.t1 AT1G18200 47.668 193 94 1 5 190 12 204 3.64e-55 176
MS.gene003158.t1 AT1G73640 51.497 167 81 0 5 171 12 178 2.09e-54 174
MS.gene003158.t1 AT1G01200 49.405 168 84 1 5 171 27 194 6.52e-54 172
MS.gene003158.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene003158.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene003158.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene003158.t1 AT5G45130 38.235 204 111 3 8 211 12 200 1.07e-46 153
MS.gene003158.t1 AT5G03530 49.123 171 80 4 3 169 10 177 1.52e-46 153
MS.gene003158.t1 AT5G03530 49.123 171 80 4 3 169 10 177 1.52e-46 153
MS.gene003158.t1 AT4G19640 42.675 157 90 0 8 164 12 168 4.44e-46 151
MS.gene003158.t1 AT5G45130 38.119 202 110 4 10 211 22 208 6.89e-46 151
MS.gene003158.t1 AT3G54840 41.558 154 89 1 8 160 35 188 1.49e-44 147
MS.gene003158.t1 AT3G54840 41.558 154 89 1 8 160 35 188 1.73e-44 147
MS.gene003158.t1 AT3G54840 41.447 152 88 1 10 160 3 154 2.94e-44 145
MS.gene003158.t1 AT5G59150 44.910 167 85 2 48 211 3 165 9.63e-44 144
MS.gene003158.t1 AT4G39890 40.123 162 96 1 7 167 10 171 1.12e-43 145
MS.gene003158.t1 AT5G10260 38.509 161 99 0 7 167 10 170 1.41e-43 145
MS.gene003158.t1 AT5G03520 43.023 172 90 3 41 211 40 204 2.59e-43 144
MS.gene003158.t1 AT2G22290 37.267 161 101 0 7 167 10 170 2.25e-41 139
MS.gene003158.t1 AT2G44610 34.615 182 113 1 7 182 10 191 1.90e-40 137
MS.gene003158.t1 AT5G64990 37.888 161 100 0 7 167 8 168 3.40e-40 136
MS.gene003158.t1 AT3G09910 43.429 175 92 4 3 173 10 181 1.39e-38 132
MS.gene003158.t1 AT3G09910 43.429 175 92 4 3 173 10 181 1.39e-38 132
MS.gene003158.t1 AT5G64990 36.310 168 100 1 7 167 8 175 2.03e-37 129
MS.gene003158.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene003158.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene003158.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene003158.t1 AT3G18820 40.123 162 90 3 6 160 8 169 2.54e-34 121
MS.gene003158.t1 AT2G21880 39.157 166 94 3 6 164 9 174 9.48e-34 120
MS.gene003158.t1 AT1G22740 37.423 163 95 3 6 161 8 170 3.37e-33 118
MS.gene003158.t1 AT4G09720 38.690 168 96 3 6 166 8 175 3.80e-33 118
MS.gene003158.t1 AT5G39620 38.182 165 95 3 7 164 6 170 4.88e-33 118
MS.gene003158.t1 AT4G19640 38.583 127 78 0 8 134 12 138 8.35e-33 115
MS.gene003158.t1 AT1G52280 38.889 162 92 3 6 160 8 169 1.02e-32 117
MS.gene003158.t1 AT1G49300 38.650 163 93 3 6 161 8 170 1.08e-32 117
MS.gene003158.t1 AT1G49300 38.650 163 93 3 6 161 8 170 1.08e-32 117
MS.gene003158.t1 AT4G19640 38.168 131 81 0 8 138 12 142 1.35e-32 116
MS.gene003158.t1 AT4G09720 38.728 173 94 4 6 166 8 180 4.16e-32 116
MS.gene003158.t1 AT4G09720 37.430 179 94 4 6 166 8 186 3.74e-31 114
MS.gene003158.t1 AT3G16100 37.654 162 94 3 6 160 8 169 6.06e-31 112
MS.gene003158.t1 AT2G21880 37.415 147 85 3 25 164 3 149 1.58e-25 98.2
MS.gene003158.t1 AT2G21880 37.415 147 85 3 25 164 3 149 1.58e-25 98.2
MS.gene003158.t1 AT5G46025 44.340 106 58 1 67 171 5 110 7.51e-25 94.4
MS.gene003158.t1 AT2G21880 34.337 166 94 4 6 164 9 166 5.14e-24 94.7
MS.gene003158.t1 AT4G28950 31.765 170 104 5 1 160 1 168 6.67e-24 94.7
MS.gene003158.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene003158.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene003158.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene003158.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene003158.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene003158.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene003158.t1 AT1G75840 30.814 172 105 5 1 160 1 170 5.16e-23 92.0
MS.gene003158.t1 AT5G45970 30.814 172 105 5 1 160 1 170 1.02e-22 91.3
MS.gene003158.t1 AT2G44690 31.737 167 100 5 6 160 18 182 2.37e-22 90.5
MS.gene003158.t1 AT1G20090 29.940 167 103 5 6 160 5 169 5.98e-22 89.4
MS.gene003158.t1 AT5G20020 31.646 158 105 2 7 164 14 168 3.33e-21 87.8
MS.gene003158.t1 AT5G55190 31.646 158 105 2 7 164 14 168 4.20e-21 87.8
MS.gene003158.t1 AT5G20010 31.646 158 105 2 7 164 14 168 4.33e-21 87.4
MS.gene003158.t1 AT3G51300 28.488 172 109 5 1 160 1 170 8.63e-21 86.3
MS.gene003158.t1 AT3G48040 30.409 171 105 5 2 160 4 172 1.15e-20 86.3
MS.gene003158.t1 AT5G55080 30.435 161 109 2 7 167 14 171 2.43e-20 85.5
MS.gene003158.t1 AT2G17800 28.488 172 109 5 1 160 1 170 6.91e-20 84.0
MS.gene003158.t1 AT2G17800 28.488 172 109 5 1 160 1 170 6.91e-20 84.0
MS.gene003158.t1 AT5G62880 29.825 171 106 5 2 160 4 172 8.51e-20 84.0
MS.gene003158.t1 AT4G35950 27.907 172 110 5 1 160 1 170 3.37e-19 82.0
MS.gene003158.t1 AT5G62880 29.518 166 103 5 6 159 8 171 4.47e-18 79.0
MS.gene003158.t1 AT3G48040 29.814 161 99 5 6 154 8 166 6.52e-18 78.2
MS.gene003158.t1 AT4G35020 33.058 121 78 3 1 120 1 119 5.62e-16 72.4
MS.gene003158.t1 AT4G35020 33.058 121 78 3 1 120 1 119 5.62e-16 72.4
MS.gene003158.t1 AT4G08190 48.438 64 30 1 97 160 67 127 3.45e-12 61.6
MS.gene003158.t1 AT3G51290 26.400 125 79 4 48 160 648 771 8.31e-11 61.2

Find 54 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCAATCAAGTTGCAAATA+TGG 0.213769 2.1:-63024091 MS.gene003158:CDS
TTCATATGCTTGCAGTCTTA+TGG 0.237130 2.1:-63021582 MS.gene003158:intron
TGATAGATCTGAAGGATTCT+TGG 0.320050 2.1:+63023007 None:intergenic
TTGACCATCGGTGTTGAATT+TGG 0.325534 2.1:-63024140 MS.gene003158:CDS
GTAGGATATGGTGGAATTCC+TGG 0.331205 2.1:-63021552 MS.gene003158:CDS
TACATCATCATCGGCGATAC+TGG 0.349931 2.1:-63024959 MS.gene003158:intron
TCCCATATTTGCAACTTGAT+TGG 0.374477 2.1:+63024089 None:intergenic
GGACCTTCTGCTGCGGGTGG+AGG 0.381621 2.1:-63021510 MS.gene003158:CDS
GGTGGAATTCCTGGACCATC+TGG 0.390111 2.1:-63021543 MS.gene003158:CDS
GGAGAACGGGTTGATCTTCA+TGG 0.402006 2.1:-63022103 MS.gene003158:CDS
GCCAATCAAGTTGCAAATAT+GGG 0.406809 2.1:-63024090 MS.gene003158:CDS
AACAGTTTGCAAAGGAGAAC+GGG 0.430066 2.1:-63022116 MS.gene003158:CDS
TATTATCAATCGTGATCATC+CGG 0.441090 2.1:+63024114 None:intergenic
TATGGAATAAAAGTAGGATA+TGG 0.443999 2.1:-63021564 MS.gene003158:CDS
CATTTAATCACTTAGCTAGC+TGG 0.445587 2.1:-63022242 MS.gene003158:CDS
AGGGATGGACCTTCTGCTGC+GGG 0.454453 2.1:-63021516 MS.gene003158:CDS
CCGATGGTCAAGTCATGAAC+AGG 0.483056 2.1:+63024152 None:intergenic
AACAGGTTGAAAGCGCTTGT+CGG 0.490151 2.1:+63024169 None:intergenic
GTTGATCTTCATGGAGGCCT+CGG 0.495654 2.1:-63022094 MS.gene003158:CDS
AATATGACAATTATGCTGAT+TGG 0.496339 2.1:-63022189 MS.gene003158:CDS
TCATATTACAGAGGGGCTGC+AGG 0.497225 2.1:-63022979 MS.gene003158:CDS
GGAATAAAAGTAGGATATGG+TGG 0.505694 2.1:-63021561 MS.gene003158:CDS
CAGTCTTATGGAATAAAAGT+AGG 0.507290 2.1:-63021570 MS.gene003158:CDS
TCCTGGACCATCTGGAGGTA+GGG 0.509121 2.1:-63021535 MS.gene003158:CDS
CAGCCTCCACCCGCAGCAGA+AGG 0.513447 2.1:+63021507 None:intergenic
GATGGACCTTCTGCTGCGGG+TGG 0.534861 2.1:-63021513 MS.gene003158:CDS
GAACAGTTTGCAAAGGAGAA+CGG 0.544908 2.1:-63022117 MS.gene003158:CDS
AACTGCTCAGAATGTTGAAG+AGG 0.551651 2.1:-63022067 MS.gene003158:intron
CTCTTCAAATACATCATCAT+CGG 0.552415 2.1:-63024968 MS.gene003158:CDS
CGGGCTGTAAGCACGGAAGA+AGG 0.556486 2.1:-63022141 MS.gene003158:CDS
TGACCTTGTGATAGATCTGA+AGG 0.556542 2.1:+63022999 None:intergenic
GGACCATCTGGAGGTAGGGA+TGG 0.558951 2.1:-63021531 MS.gene003158:CDS
TCCCTACCTCCAGATGGTCC+AGG 0.559719 2.1:+63021534 None:intergenic
TAATCACTTAGCTAGCTGGT+TGG 0.562132 2.1:-63022238 MS.gene003158:CDS
GTGTGATCTTGCTCACAGAC+GGG 0.563085 2.1:-63022160 MS.gene003158:CDS
TGCTTGTTTATGATATAACC+AGG 0.573499 2.1:-63022951 MS.gene003158:intron
TCGGTGTTGAATTTGGTGCC+CGG 0.576405 2.1:-63024133 MS.gene003158:CDS
TCACAAGGTCATATTACAGA+GGG 0.579518 2.1:-63022987 MS.gene003158:CDS
CGATGATGATGTATTTGAAG+AGG 0.579909 2.1:+63024969 None:intergenic
ATTATCAATCGTGATCATCC+GGG 0.581341 2.1:+63024115 None:intergenic
AGTGTGATCTTGCTCACAGA+CGG 0.590726 2.1:-63022161 MS.gene003158:CDS
TCACAGACGGGCTGTAAGCA+CGG 0.591546 2.1:-63022148 MS.gene003158:CDS
CCTGTTCATGACTTGACCAT+CGG 0.602736 2.1:-63024152 MS.gene003158:CDS
TTCCTGGACCATCTGGAGGT+AGG 0.607438 2.1:-63021536 MS.gene003158:CDS
TAGGGATGGACCTTCTGCTG+CGG 0.608244 2.1:-63021517 MS.gene003158:CDS
CTAGCTGGTTGGAAGATGCA+AGG 0.612086 2.1:-63022227 MS.gene003158:CDS
GGCACCAAATTCAACACCGA+TGG 0.616278 2.1:+63024136 None:intergenic
AGAAGGTGAACAGTTTGCAA+AGG 0.650461 2.1:-63022124 MS.gene003158:CDS
GGAATTCCTGGACCATCTGG+AGG 0.651030 2.1:-63021540 MS.gene003158:CDS
GGTCCATCCCTACCTCCAGA+TGG 0.660882 2.1:+63021528 None:intergenic
ATCACAAGGTCATATTACAG+AGG 0.688361 2.1:-63022988 MS.gene003158:CDS
AATCCTTCAGATCTATCACA+AGG 0.690302 2.1:-63023002 MS.gene003158:CDS
CACAAGGTCATATTACAGAG+GGG 0.730372 2.1:-63022986 MS.gene003158:CDS
GAACGGGTTGATCTTCATGG+AGG 0.745466 2.1:-63022100 MS.gene003158:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATACATGAAATAAATTTA+TGG - chr2.1:63022979-63022998 MS.gene003158:CDS 10.0%
!!! GAAAATAATTATTGTATTTT+GGG + chr2.1:63023594-63023613 None:intergenic 10.0%
!!! TGAAAATAATTATTGTATTT+TGG + chr2.1:63023595-63023614 None:intergenic 10.0%
!! AAATAAAAAGAGATTAGAAA+GGG + chr2.1:63021567-63021586 None:intergenic 15.0%
!! AGATTGTATTACAAAAATAA+AGG + chr2.1:63024768-63024787 None:intergenic 15.0%
!! TAAATAAAAAGAGATTAGAA+AGG + chr2.1:63021568-63021587 None:intergenic 15.0%
!! TAAATACAATTTCATAACTT+GGG - chr2.1:63023939-63023958 MS.gene003158:intron 15.0%
!! TAATATCATTAAGAATTTGT+GGG - chr2.1:63024723-63024742 MS.gene003158:intron 15.0%
!! TACAAAATTTCAAAATAACA+AGG + chr2.1:63023209-63023228 None:intergenic 15.0%
!! TTAAATACAATTTCATAACT+TGG - chr2.1:63023938-63023957 MS.gene003158:intron 15.0%
!! TTAATATCATTAAGAATTTG+TGG - chr2.1:63024722-63024741 MS.gene003158:intron 15.0%
!!! AAAGATTTTATCTAATAGAT+GGG - chr2.1:63023064-63023083 MS.gene003158:intron 15.0%
!!! AAATTATGTAGTTTAAGTTT+TGG - chr2.1:63022193-63022212 MS.gene003158:CDS 15.0%
!!! ACACAATTTTTTTCAAAATA+AGG + chr2.1:63022256-63022275 None:intergenic 15.0%
!!! ATTTATTCATTTTTCTTTTC+AGG - chr2.1:63021654-63021673 MS.gene003158:intron 15.0%
!!! CATTATTTTTATGTAGTTTA+GGG - chr2.1:63021938-63021957 MS.gene003158:intron 15.0%
!!! TAAAGTGATAGTTTATTTTA+TGG - chr2.1:63021971-63021990 MS.gene003158:intron 15.0%
!!! TAAATGGATTATATATTAAG+TGG + chr2.1:63022886-63022905 None:intergenic 15.0%
!!! TATTTTGAAAAAAATTGTGT+AGG - chr2.1:63022256-63022275 MS.gene003158:intron 15.0%
!!! TCATTATTTTTATGTAGTTT+AGG - chr2.1:63021937-63021956 MS.gene003158:intron 15.0%
!!! TTCAATAAATTGATTTTTGT+TGG + chr2.1:63024011-63024030 None:intergenic 15.0%
!!! TTTATTCATTTTTCTTTTCA+GGG - chr2.1:63021655-63021674 MS.gene003158:intron 15.0%
!! AATAAAAAGAGATTAGAAAG+GGG + chr2.1:63021566-63021585 None:intergenic 20.0%
!! AATACAAACTAAACGAAATA+AGG + chr2.1:63022168-63022187 None:intergenic 20.0%
!! ATCTCTGTTTATATATTAAG+TGG + chr2.1:63023272-63023291 None:intergenic 20.0%
!! TACAACATTTCAAAATAACA+AGG + chr2.1:63022823-63022842 None:intergenic 20.0%
!! TGAAACAAAACTAACAATAA+AGG + chr2.1:63022100-63022119 None:intergenic 20.0%
!! TGGAGTTAATGATTATTATA+AGG - chr2.1:63024840-63024859 MS.gene003158:intron 20.0%
!!! ATAGCTTTTAGATTTTTTCT+AGG - chr2.1:63023966-63023985 MS.gene003158:intron 20.0%
!!! ATATGATTTGCAAATCATTT+TGG - chr2.1:63023889-63023908 MS.gene003158:intron 20.0%
!!! ATCATTTTATGTTGATTCAT+TGG - chr2.1:63022639-63022658 MS.gene003158:intron 20.0%
!!! ATTCAATTTTGTTATTGTGA+TGG - chr2.1:63022072-63022091 MS.gene003158:CDS 20.0%
!!! GAAAGATTTTATCTAATAGA+TGG - chr2.1:63023063-63023082 MS.gene003158:intron 20.0%
!!! GTTTATTTTATGGACTAAAT+TGG - chr2.1:63021981-63022000 MS.gene003158:intron 20.0%
!!! TAGCTTTTAGATTTTTTCTA+GGG - chr2.1:63023967-63023986 MS.gene003158:intron 20.0%
!!! TGTGTTGTTTAATGTAAATA+AGG - chr2.1:63024169-63024188 MS.gene003158:CDS 20.0%
! AAAAAAATTGTGTAGGAGTT+GGG - chr2.1:63022263-63022282 MS.gene003158:intron 25.0%
! AAAAATAATGAATAGTGCGA+TGG + chr2.1:63021928-63021947 None:intergenic 25.0%
! AAAACTAACCATTTGAAAAC+TGG + chr2.1:63023140-63023159 None:intergenic 25.0%
! AAACTAACATGAAACTACAT+AGG + chr2.1:63024147-63024166 None:intergenic 25.0%
! AACCATATACAAAAAGATTC+AGG - chr2.1:63024607-63024626 MS.gene003158:intron 25.0%
! AACCTGTTATGTATAAAATC+TGG + chr2.1:63024504-63024523 None:intergenic 25.0%
! AATATGACAATTATGCTGAT+TGG - chr2.1:63024291-63024310 MS.gene003158:intron 25.0%
! AGTATGTTGTTCCATTAAAT+TGG + chr2.1:63024097-63024116 None:intergenic 25.0%
! ATAATCATTCTATGCTGAAA+AGG + chr2.1:63023356-63023375 None:intergenic 25.0%
! ATATACAAAAAGATTCAGGA+TGG - chr2.1:63024611-63024630 MS.gene003158:intron 25.0%
! ATTAAAGAAGCAATACATTG+TGG - chr2.1:63023621-63023640 MS.gene003158:intron 25.0%
! CTCAACAATGTAAATGTAAA+TGG + chr2.1:63022902-63022921 None:intergenic 25.0%
! GAAAAATGAATAAATCCGAT+CGG + chr2.1:63021649-63021668 None:intergenic 25.0%
! GAACTTATTCACTATATTTC+AGG - chr2.1:63023446-63023465 MS.gene003158:intron 25.0%
! GTATTAGACTATAAGTTACT+CGG - chr2.1:63023689-63023708 MS.gene003158:intron 25.0%
! GTATTTAGTAGTAGTTAATG+AGG - chr2.1:63021807-63021826 MS.gene003158:intron 25.0%
! TAAATAATCTCACCAAAGTT+TGG - chr2.1:63023725-63023744 MS.gene003158:intron 25.0%
! TAATCATTCTATGCTGAAAA+GGG + chr2.1:63023355-63023374 None:intergenic 25.0%
! TATGGAATAAAAGTAGGATA+TGG - chr2.1:63024916-63024935 MS.gene003158:intron 25.0%
! TGGAAACATTATTCATTTGT+TGG - chr2.1:63023390-63023409 MS.gene003158:intron 25.0%
! TTAAAGAAGCAATACATTGT+GGG - chr2.1:63023622-63023641 MS.gene003158:intron 25.0%
! TTAATAAATTGTGAAGCTGA+AGG - chr2.1:63023419-63023438 MS.gene003158:intron 25.0%
! TTTATGTAGTTTAGGGAAAT+TGG - chr2.1:63021945-63021964 MS.gene003158:intron 25.0%
!! AATATAACCTATCCTTTTAC+AGG - chr2.1:63024565-63024584 MS.gene003158:intron 25.0%
!! ATCCTGAATCTTTTTGTATA+TGG + chr2.1:63024612-63024631 None:intergenic 25.0%
!! TTTTATACATAACAGGTTCT+AGG - chr2.1:63024506-63024525 MS.gene003158:intron 25.0%
!! TTTTTATGAATGCCTGTAAA+AGG + chr2.1:63024580-63024599 None:intergenic 25.0%
!!! GAGTATTCTTTGAAACAAAA+TGG + chr2.1:63022778-63022797 None:intergenic 25.0%
!!! TTTGAGTTTTTATATGCCTT+GGG - chr2.1:63024050-63024069 MS.gene003158:intron 25.0%
!!! TTTTGAGTTTTTATATGCCT+TGG - chr2.1:63024049-63024068 MS.gene003158:intron 25.0%
AATGAGAACCTAACTATATG+GGG - chr2.1:63022922-63022941 MS.gene003158:intron 30.0%
AATGATTATCCAGATTTCAG+TGG - chr2.1:63023367-63023386 MS.gene003158:intron 30.0%
AATGGAACAACATACTATGT+GGG - chr2.1:63024101-63024120 MS.gene003158:CDS 30.0%
ACAAGATTGACTACAGAAAT+AGG - chr2.1:63023160-63023179 MS.gene003158:intron 30.0%
ACAATCTGTGTATGTTTCAA+GGG - chr2.1:63024781-63024800 MS.gene003158:intron 30.0%
AGAATGAGAACCTAACTATA+TGG - chr2.1:63022920-63022939 MS.gene003158:intron 30.0%
AGATTTGTCATTCTTTACCT+CGG - chr2.1:63024680-63024699 MS.gene003158:intron 30.0%
AGTATGAACATTGAACAAGT+TGG + chr2.1:63022468-63022487 None:intergenic 30.0%
ATAATAGAAGTCAAAGCTTG+AGG + chr2.1:63023558-63023577 None:intergenic 30.0%
ATGCAGATAGGAACTATATT+TGG - chr2.1:63022683-63022702 MS.gene003158:intron 30.0%
ATTTCATGTAATCGTTGAGA+TGG + chr2.1:63023840-63023859 None:intergenic 30.0%
CAAATCATATTTCAAGCAAC+TGG + chr2.1:63023879-63023898 None:intergenic 30.0%
CAACCAAATAGAAATCTTGA+GGG + chr2.1:63022598-63022617 None:intergenic 30.0%
CTCTTCAAATACATCATCAT+CGG - chr2.1:63021512-63021531 MS.gene003158:CDS 30.0%
CTTATTCACTATATTTCAGG+CGG - chr2.1:63023449-63023468 MS.gene003158:intron 30.0%
GAAAAAAATTGTGTAGGAGT+TGG - chr2.1:63022262-63022281 MS.gene003158:intron 30.0%
GAATGAGAACCTAACTATAT+GGG - chr2.1:63022921-63022940 MS.gene003158:intron 30.0%
TAAAGAAGCAATACATTGTG+GGG - chr2.1:63023623-63023642 MS.gene003158:intron 30.0%
TAATGGAACAACATACTATG+TGG - chr2.1:63024100-63024119 MS.gene003158:CDS 30.0%
TACAATCTGTGTATGTTTCA+AGG - chr2.1:63024780-63024799 MS.gene003158:intron 30.0%
TATTATCAATCGTGATCATC+CGG + chr2.1:63022369-63022388 None:intergenic 30.0%
TCAACCAAATAGAAATCTTG+AGG + chr2.1:63022599-63022618 None:intergenic 30.0%
TCTAAACTAATCTTCTCAAG+TGG - chr2.1:63023024-63023043 MS.gene003158:intron 30.0%
TGAAAGAGTTGACAAACATA+CGG + chr2.1:63022419-63022438 None:intergenic 30.0%
TGATAGTTTAGGGACTAAAT+TGG - chr2.1:63022012-63022031 MS.gene003158:intron 30.0%
TGCTTGTTTATGATATAACC+AGG - chr2.1:63023529-63023548 MS.gene003158:intron 30.0%
TTATTCACTATATTTCAGGC+GGG - chr2.1:63023450-63023469 MS.gene003158:intron 30.0%
TTTGAGTGCATCCAATTTAA+TGG - chr2.1:63024083-63024102 MS.gene003158:intron 30.0%
! AGCCAGATTTTATACATAAC+AGG - chr2.1:63024499-63024518 MS.gene003158:intron 30.0%
! AGTTTTTGATGTATCGAATG+AGG - chr2.1:63024634-63024653 MS.gene003158:intron 30.0%
! CAGTCTTATGGAATAAAAGT+AGG - chr2.1:63024910-63024929 MS.gene003158:intron 30.0%
! GGAGAGAAATTGATAGTTTA+GGG - chr2.1:63022033-63022052 MS.gene003158:intron 30.0%
! TAGGAACTATATTTGGTAGT+AGG - chr2.1:63022690-63022709 MS.gene003158:intron 30.0%
! TATATTTGGTAGTAGGCTTA+GGG - chr2.1:63022697-63022716 MS.gene003158:intron 30.0%
! TGGAGAGAAATTGATAGTTT+AGG - chr2.1:63022032-63022051 MS.gene003158:intron 30.0%
! TTGATAGTTTAGGGACTAAA+TGG - chr2.1:63022042-63022061 MS.gene003158:intron 30.0%
!! ATTATCAGTGACTTGTTTGT+TGG + chr2.1:63024877-63024896 None:intergenic 30.0%
!! TATTGTTGATTCTCGTTTCT+AGG - chr2.1:63022521-63022540 MS.gene003158:intron 30.0%
!! TGGCTTTGTATATGTAAGAT+AGG - chr2.1:63022999-63023018 MS.gene003158:CDS 30.0%
!! TGTAGTTTAAGTTTTGGTAG+TGG - chr2.1:63022199-63022218 MS.gene003158:CDS 30.0%
!! TTCTTTGAAACAAAATGGCA+TGG + chr2.1:63022773-63022792 None:intergenic 30.0%
!!! AGGTTCTAGGTTGAATATTT+TGG - chr2.1:63024519-63024538 MS.gene003158:intron 30.0%
AAAGAAGCAATACATTGTGG+GGG - chr2.1:63023624-63023643 MS.gene003158:intron 35.0%
AAATTTCACAGAACCTCATC+TGG + chr2.1:63023313-63023332 None:intergenic 35.0%
AACAAAATTTGACCCAGATG+AGG - chr2.1:63023297-63023316 MS.gene003158:intron 35.0%
AATCCTTCAGATCTATCACA+AGG - chr2.1:63023478-63023497 MS.gene003158:intron 35.0%
AATCTTCTCAAGTGGTCATA+GGG - chr2.1:63023032-63023051 MS.gene003158:intron 35.0%
AATTTCACAGAACCTCATCT+GGG + chr2.1:63023312-63023331 None:intergenic 35.0%
ACTTTCATCCCCATATAGTT+AGG + chr2.1:63022933-63022952 None:intergenic 35.0%
AGCTAAGAATGATCTTCCTT+AGG - chr2.1:63023782-63023801 MS.gene003158:intron 35.0%
ATATGAAGAGCTATGCAGAT+AGG - chr2.1:63022671-63022690 MS.gene003158:intron 35.0%
ATCACAAGGTCATATTACAG+AGG - chr2.1:63023492-63023511 MS.gene003158:intron 35.0%
ATCTTGAGGGTGAAACTAAA+AGG + chr2.1:63022585-63022604 None:intergenic 35.0%
ATGAATGCCTGTAAAAGGAT+AGG + chr2.1:63024575-63024594 None:intergenic 35.0%
ATTATCAATCGTGATCATCC+GGG + chr2.1:63022368-63022387 None:intergenic 35.0%
CATTTAATCACTTAGCTAGC+TGG - chr2.1:63024238-63024257 MS.gene003158:intron 35.0%
CTAACCATTTGAAAACTGGA+AGG + chr2.1:63023136-63023155 None:intergenic 35.0%
GATTTGTCATTCTTTACCTC+GGG - chr2.1:63024681-63024700 MS.gene003158:intron 35.0%
GCGACATAAATTTCAATGAG+AGG + chr2.1:63023187-63023206 None:intergenic 35.0%
GCTAAGAATGATCTTCCTTA+GGG - chr2.1:63023783-63023802 MS.gene003158:intron 35.0%
GGAATAAAAGTAGGATATGG+TGG - chr2.1:63024919-63024938 MS.gene003158:intron 35.0%
GGAGAGAAAGTGATAGTTTA+GGG - chr2.1:63022002-63022021 MS.gene003158:intron 35.0%
GTGATCATCATTTCAATCCA+GGG - chr2.1:63022559-63022578 MS.gene003158:intron 35.0%
TAATCTTCTCAAGTGGTCAT+AGG - chr2.1:63023031-63023050 MS.gene003158:intron 35.0%
TAGTTTAGGGACTAAATGGA+TGG - chr2.1:63022046-63022065 MS.gene003158:intron 35.0%
TCACAAGGTCATATTACAGA+GGG - chr2.1:63023493-63023512 MS.gene003158:intron 35.0%
TCACCCTCAAGATTTCTATT+TGG - chr2.1:63022592-63022611 MS.gene003158:intron 35.0%
TCCCATATTTGCAACTTGAT+TGG + chr2.1:63022394-63022413 None:intergenic 35.0%
TGACTGACCAATAATTGTTC+CGG + chr2.1:63021880-63021899 None:intergenic 35.0%
TGATAGATCTGAAGGATTCT+TGG + chr2.1:63023476-63023495 None:intergenic 35.0%
TGGAGAGAAAGTGATAGTTT+AGG - chr2.1:63022001-63022020 MS.gene003158:intron 35.0%
TGTGATCATCATTTCAATCC+AGG - chr2.1:63022558-63022577 MS.gene003158:intron 35.0%
TTCATATGCTTGCAGTCTTA+TGG - chr2.1:63024898-63024917 MS.gene003158:intron 35.0%
! AGCCAATCAAGTTGCAAATA+TGG - chr2.1:63022389-63022408 MS.gene003158:intron 35.0%
! ATAGAAAAGTGTAGCTCTTC+TGG - chr2.1:63024820-63024839 MS.gene003158:intron 35.0%
! ATCTAATAGATGGGAGTGTA+GGG - chr2.1:63023073-63023092 MS.gene003158:intron 35.0%
! CGATGATGATGTATTTGAAG+AGG + chr2.1:63021514-63021533 None:intergenic 35.0%
! CGTTTCTAGGAATTGGTAAT+TGG - chr2.1:63022534-63022553 MS.gene003158:intron 35.0%
! CTATATTTGGTAGTAGGCTT+AGG - chr2.1:63022696-63022715 MS.gene003158:intron 35.0%
! CTCTCTTTTCTTCCAAACTT+TGG + chr2.1:63023740-63023759 None:intergenic 35.0%
! CTGCTGTTTGTCATATTTGT+AGG - chr2.1:63022726-63022745 MS.gene003158:intron 35.0%
! GCCAATCAAGTTGCAAATAT+GGG - chr2.1:63022390-63022409 MS.gene003158:intron 35.0%
! TATCTAATAGATGGGAGTGT+AGG - chr2.1:63023072-63023091 MS.gene003158:intron 35.0%
! TGAACATTGAACAAGTTGGA+AGG + chr2.1:63022464-63022483 None:intergenic 35.0%
! TGATTCTCGTTTCTAGGAAT+TGG - chr2.1:63022527-63022546 MS.gene003158:intron 35.0%
!! AAAACTGGAAGGTACCTTAA+GGG + chr2.1:63023125-63023144 None:intergenic 35.0%
!! ATAAAATCTGGCTTTCCTTG+TGG + chr2.1:63024492-63024511 None:intergenic 35.0%
!! TAAAATCTGGCTTTCCTTGT+GGG + chr2.1:63024491-63024510 None:intergenic 35.0%
AACAGTTTGCAAAGGAGAAC+GGG - chr2.1:63024364-63024383 MS.gene003158:intron 40.0%
AACTGCTCAGAATGTTGAAG+AGG - chr2.1:63024413-63024432 MS.gene003158:intron 40.0%
AAGAAGCAATACATTGTGGG+GGG - chr2.1:63023625-63023644 MS.gene003158:intron 40.0%
AAGTGGTCATAGGGTATGAA+TGG - chr2.1:63023041-63023060 MS.gene003158:intron 40.0%
ACCCTGTGTTTATGAATAGG+AGG - chr2.1:63024211-63024230 MS.gene003158:intron 40.0%
AGAAGGTGAACAGTTTGCAA+AGG - chr2.1:63024356-63024375 MS.gene003158:intron 40.0%
ATGAATAGTGCGATGGAGTT+AGG + chr2.1:63021921-63021940 None:intergenic 40.0%
ATGTTTCCACCACTGAAATC+TGG + chr2.1:63023379-63023398 None:intergenic 40.0%
ATTCTATGCTGAAAAGGGAC+TGG + chr2.1:63023350-63023369 None:intergenic 40.0%
CACAAGGTCATATTACAGAG+GGG - chr2.1:63023494-63023513 MS.gene003158:intron 40.0%
CAGGCATTCATAAAAACAGC+TGG - chr2.1:63024584-63024603 MS.gene003158:intron 40.0%
CATTCTTAGCTAAGTGCCAT+CGG + chr2.1:63023773-63023792 None:intergenic 40.0%
CCCTCCTATTCATAAACACA+GGG + chr2.1:63024215-63024234 None:intergenic 40.0%
CCCTGTGTTTATGAATAGGA+GGG - chr2.1:63024212-63024231 MS.gene003158:intron 40.0%
CTATTCATAAACACAGGGTC+AGG + chr2.1:63024210-63024229 None:intergenic 40.0%
CTCAAAACATGTATCTCCCA+AGG + chr2.1:63024069-63024088 None:intergenic 40.0%
CTGACCCTGTGTTTATGAAT+AGG - chr2.1:63024208-63024227 MS.gene003158:intron 40.0%
GAACAGTTTGCAAAGGAGAA+CGG - chr2.1:63024363-63024382 MS.gene003158:intron 40.0%
GAATGATCTTCCTTAGGGTT+AGG - chr2.1:63023788-63023807 MS.gene003158:intron 40.0%
GATTATCCAGATTTCAGTGG+TGG - chr2.1:63023370-63023389 MS.gene003158:intron 40.0%
TAATCACTTAGCTAGCTGGT+TGG - chr2.1:63024242-63024261 MS.gene003158:intron 40.0%
TCACTGACCGGAACAATTAT+TGG - chr2.1:63021870-63021889 MS.gene003158:CDS 40.0%
TCCCTCCTATTCATAAACAC+AGG + chr2.1:63024216-63024235 None:intergenic 40.0%
TCTGTGTATGTTTCAAGGGA+AGG - chr2.1:63024785-63024804 MS.gene003158:intron 40.0%
TGACCTTGTGATAGATCTGA+AGG + chr2.1:63023484-63023503 None:intergenic 40.0%
! GGTACCTTCCAGTTTTCAAA+TGG - chr2.1:63023129-63023148 MS.gene003158:intron 40.0%
! TGCGATATGGGATTTGGTAA+TGG - chr2.1:63023096-63023115 MS.gene003158:intron 40.0%
!! GAAAACTGGAAGGTACCTTA+AGG + chr2.1:63023126-63023145 None:intergenic 40.0%
!! TGTGGGACAATTTTGATGCA+TGG - chr2.1:63024118-63024137 MS.gene003158:CDS 40.0%
!! TTGACCATCGGTGTTGAATT+TGG - chr2.1:63022340-63022359 MS.gene003158:intron 40.0%
!! TTTGGTAATGGTGACCCTTA+AGG - chr2.1:63023108-63023127 MS.gene003158:intron 40.0%
AGGTGTAGTTCCTAACCCTA+AGG + chr2.1:63023801-63023820 None:intergenic 45.0%
AGTCAAAGCTTGAGGATACC+TGG + chr2.1:63023550-63023569 None:intergenic 45.0%
AGTGTGATCTTGCTCACAGA+CGG - chr2.1:63024319-63024338 MS.gene003158:intron 45.0%
ATGAAGTGACAAAACACCCG+AGG + chr2.1:63024700-63024719 None:intergenic 45.0%
CCTGTTCATGACTTGACCAT+CGG - chr2.1:63022328-63022347 MS.gene003158:intron 45.0%
GGGGGATGATGAAAATCACT+GGG - chr2.1:63023643-63023662 MS.gene003158:intron 45.0%
GTCATAAAACCAAAGCCCTC+TGG + chr2.1:63022234-63022253 None:intergenic 45.0%
TACATCATCATCGGCGATAC+TGG - chr2.1:63021521-63021540 MS.gene003158:CDS 45.0%
TAGTGGCAATTCATGCCAGA+GGG - chr2.1:63022216-63022235 MS.gene003158:CDS 45.0%
TCACTGGGACAAGTCATGAA+TGG - chr2.1:63023658-63023677 MS.gene003158:intron 45.0%
TTCCAGCTTCGATTTCCGAT+CGG - chr2.1:63021631-63021650 MS.gene003158:intron 45.0%
! ATTCTGAGCAGTTTTTGCCG+AGG + chr2.1:63024406-63024425 None:intergenic 45.0%
! GTAGGATATGGTGGAATTCC+TGG - chr2.1:63024928-63024947 MS.gene003158:intron 45.0%
!! AACAGGTTGAAAGCGCTTGT+CGG + chr2.1:63022314-63022333 None:intergenic 45.0%
AGGGTGAAACTAAAAGGCCC+TGG + chr2.1:63022579-63022598 None:intergenic 50.0%
ATCCGATCGGAAATCGAAGC+TGG + chr2.1:63021636-63021655 None:intergenic 50.0%
CAATTCATGCCAGAGGGCTT+TGG - chr2.1:63022222-63022241 MS.gene003158:CDS 50.0%
CCGATGGTCAAGTCATGAAC+AGG + chr2.1:63022331-63022350 None:intergenic 50.0%
CTAGCTGGTTGGAAGATGCA+AGG - chr2.1:63024253-63024272 MS.gene003158:intron 50.0%
GGCACCAAATTCAACACCGA+TGG + chr2.1:63022347-63022366 None:intergenic 50.0%
GGGGGGATGATGAAAATCAC+TGG - chr2.1:63023642-63023661 MS.gene003158:intron 50.0%
GTAGGGTGCGATATGGGATT+TGG - chr2.1:63023090-63023109 MS.gene003158:intron 50.0%
GTAGTGGCAATTCATGCCAG+AGG - chr2.1:63022215-63022234 MS.gene003158:CDS 50.0%
GTGTGATCTTGCTCACAGAC+GGG - chr2.1:63024320-63024339 MS.gene003158:intron 50.0%
GTTGATCTTCATGGAGGCCT+CGG - chr2.1:63024386-63024405 MS.gene003158:intron 50.0%
TCATATTACAGAGGGGCTGC+AGG - chr2.1:63023501-63023520 MS.gene003158:intron 50.0%
TTCCGGTCAGTGATCGAACT+CGG + chr2.1:63021863-63021882 None:intergenic 50.0%
!! AATCTGGCTTTCCTTGTGGG+AGG + chr2.1:63024488-63024507 None:intergenic 50.0%
!! ATCTGGCTTTCCTTGTGGGA+GGG + chr2.1:63024487-63024506 None:intergenic 50.0%
!! CGTTGAGATGGACTGTGAAG+TGG + chr2.1:63023828-63023847 None:intergenic 50.0%
!! GAACGGGTTGATCTTCATGG+AGG - chr2.1:63024380-63024399 MS.gene003158:intron 50.0%
!! GGAGAACGGGTTGATCTTCA+TGG - chr2.1:63024377-63024396 MS.gene003158:intron 50.0%
!! TCGGTGTTGAATTTGGTGCC+CGG - chr2.1:63022347-63022366 MS.gene003158:intron 50.0%
!! TGAGATGGACTGTGAAGTGG+CGG + chr2.1:63023825-63023844 None:intergenic 50.0%
ACCCGAGTTCGATCACTGAC+CGG - chr2.1:63021858-63021877 MS.gene003158:CDS 55.0%
AGAGAGACACCATCGTCCGA+TGG - chr2.1:63023754-63023773 MS.gene003158:intron 55.0%
AGCTAAGTGCCATCGGACGA+TGG + chr2.1:63023766-63023785 None:intergenic 55.0%
GGAATTCCTGGACCATCTGG+AGG - chr2.1:63024940-63024959 MS.gene003158:intron 55.0%
GGTGGAATTCCTGGACCATC+TGG - chr2.1:63024937-63024956 MS.gene003158:intron 55.0%
GTGCGATGGAGTTAGGCAAG+AGG + chr2.1:63021914-63021933 None:intergenic 55.0%
TAGGGATGGACCTTCTGCTG+CGG - chr2.1:63024963-63024982 MS.gene003158:CDS 55.0%
TCCGGTCAGTGATCGAACTC+GGG + chr2.1:63021862-63021881 None:intergenic 55.0%
TCCTGGACCATCTGGAGGTA+GGG - chr2.1:63024945-63024964 MS.gene003158:intron 55.0%
TTCCTGGACCATCTGGAGGT+AGG - chr2.1:63024944-63024963 MS.gene003158:intron 55.0%
TTCCTTGTGGGAGGGTGGAT+GGG + chr2.1:63024479-63024498 None:intergenic 55.0%
TTTCCTTGTGGGAGGGTGGA+TGG + chr2.1:63024480-63024499 None:intergenic 55.0%
! GGGAGTGTAGGGTGCGATAT+GGG - chr2.1:63023084-63023103 MS.gene003158:intron 55.0%
! TGGGAGTGTAGGGTGCGATA+TGG - chr2.1:63023083-63023102 MS.gene003158:intron 55.0%
!! TCACAGACGGGCTGTAAGCA+CGG - chr2.1:63024332-63024351 MS.gene003158:intron 55.0%
AGGGATGGACCTTCTGCTGC+GGG - chr2.1:63024964-63024983 MS.gene003158:CDS 60.0%
CGGGCTGTAAGCACGGAAGA+AGG - chr2.1:63024339-63024358 MS.gene003158:intron 60.0%
GGACCATCTGGAGGTAGGGA+TGG - chr2.1:63024949-63024968 MS.gene003158:intron 60.0%
GGTCCATCCCTACCTCCAGA+TGG + chr2.1:63024955-63024974 None:intergenic 60.0%
TCCCTACCTCCAGATGGTCC+AGG + chr2.1:63024949-63024968 None:intergenic 60.0%
TGGCTTTCCTTGTGGGAGGG+TGG + chr2.1:63024484-63024503 None:intergenic 60.0%
TTCCCATCCACCCTCCCACA+AGG - chr2.1:63024474-63024493 MS.gene003158:intron 60.0%
! ATGGACTGTGAAGTGGCGGC+AGG + chr2.1:63023821-63023840 None:intergenic 60.0%
GATGGACCTTCTGCTGCGGG+TGG - chr2.1:63024967-63024986 MS.gene003158:CDS 65.0%
CAGCCTCCACCCGCAGCAGA+AGG + chr2.1:63024976-63024995 None:intergenic 70.0%
GGACCTTCTGCTGCGGGTGG+AGG - chr2.1:63024970-63024989 MS.gene003158:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 63021497 63025005 63021497 ID=MS.gene003158
chr2.1 mRNA 63021497 63025005 63021497 ID=MS.gene003158.t1;Parent=MS.gene003158
chr2.1 exon 63024960 63025005 63024960 ID=MS.gene003158.t1.exon1;Parent=MS.gene003158.t1
chr2.1 CDS 63024960 63025005 63024960 ID=cds.MS.gene003158.t1;Parent=MS.gene003158.t1
chr2.1 exon 63024085 63024224 63024085 ID=MS.gene003158.t1.exon2;Parent=MS.gene003158.t1
chr2.1 CDS 63024085 63024224 63024085 ID=cds.MS.gene003158.t1;Parent=MS.gene003158.t1
chr2.1 exon 63022952 63023034 63022952 ID=MS.gene003158.t1.exon3;Parent=MS.gene003158.t1
chr2.1 CDS 63022952 63023034 63022952 ID=cds.MS.gene003158.t1;Parent=MS.gene003158.t1
chr2.1 exon 63022068 63022272 63022068 ID=MS.gene003158.t1.exon4;Parent=MS.gene003158.t1
chr2.1 CDS 63022068 63022272 63022068 ID=cds.MS.gene003158.t1;Parent=MS.gene003158.t1
chr2.1 exon 63021847 63021915 63021847 ID=MS.gene003158.t1.exon5;Parent=MS.gene003158.t1
chr2.1 CDS 63021847 63021915 63021847 ID=cds.MS.gene003158.t1;Parent=MS.gene003158.t1
chr2.1 exon 63021497 63021589 63021497 ID=MS.gene003158.t1.exon6;Parent=MS.gene003158.t1
chr2.1 CDS 63021497 63021589 63021497 ID=cds.MS.gene003158.t1;Parent=MS.gene003158.t1
Gene Sequence

>MS.gene003158

ATGTCTTACGCATACCTCTTCAAATACATCATCATCGGCGATACTGGTAATTATAATCTCAATTAACCCCTTTCTAATCTCTTTTTATTTATCTTAATTAATCTCAATTTATTCTATTCTCTTAATCATGCGTCTTCCAGCTTCGATTTCCGATCGGATTTATTCATTTTTCTTTTCAGGGTTTTTGTTTTGTTTGAGAATTATTTTATATACATGTATAATATGATGATGATGATGATTATTTGATGTTGATTCTCTTGTGTTATTTTAACAAGCTAACAAAATTTTGATTATTACTAACTATTCATAAGTATTTAGTAGTAGTTAATGAGGTTTAATTAATGAAGAATCGATCAGAAGCACCCGAGTTCGATCACTGACCGGAACAATTATTGGTCAGTCAGACTTTAGTTACCTCTTGCCTAACTCCATCGCACTATTCATTATTTTTATGTAGTTTAGGGAAATTGGAGTTAAAGTGATAGTTTATTTTATGGACTAAATTGGAGAGAAAGTGATAGTTTAGGGACTAAATTGGAGAGAAATTGATAGTTTAGGGACTAAATGGATGGTTTATTCAATTTTGTTATTGTGATGGATCCTTTATTGTTAGTTTTGTTTCATTAACTATGAATGAAAACTGTTGAGTGTGTTATATATAGTTTGATCCTTATTTCGTTTAGTTTGTATTTTGTTAAATTATGTAGTTTAAGTTTTGGTAGTGGCAATTCATGCCAGAGGGCTTTGGTTTTATGACCTTATTTTGAAAAAAATTGTGTAGGAGTTGGGAAGTCATGTCTTCTACTTCAGTTCACCGACAAGCGCTTTCAACCTGTTCATGACTTGACCATCGGTGTTGAATTTGGTGCCCGGATGATCACGATTGATAATAAGCCAATCAAGTTGCAAATATGGGATACCGTATGTTTGTCAACTCTTTCATAGAACTTGTTTATTACTTACTCCTTCCAACTTGTTCAATGTTCATACTTAATTACTAATTTACATACAAATCTGTGAAAATTATTGTTGATTCTCGTTTCTAGGAATTGGTAATTGGTTGTGATCATCATTTCAATCCAGGGCCTTTTAGTTTCACCCTCAAGATTTCTATTTGGTTGAAAATGATATTTCATATTATTATCATTTTATGTTGATTCATTGGCTGATTTTCATATGAAGAGCTATGCAGATAGGAACTATATTTGGTAGTAGGCTTAGGGTTGATGCTGCTGTTTGTCATATTTGTAGGCTATCGCTATAATTTTAACATCCATGCCATTTTGTTTCAAAGAATACTCTGCTAAGTGTAATAATAACATGCCTTGTTATTTTGAAATGTTGTATCTATAACTCTCTTTATAATGTTAAAAAATCATCAGTGTTCCACTTAATATATAATCCATTTACATTTACATTGTTGAGAATGAGAACCTAACTATATGGGGATGAAAGTATTTGAATTTATCTGTAAAAGTTACTATATACATGAAATAAATTTATGGCTTTGTATATGTAAGATAGGTTTCTAAACTAATCTTCTCAAGTGGTCATAGGGTATGAATGGAAAGATTTTATCTAATAGATGGGAGTGTAGGGTGCGATATGGGATTTGGTAATGGTGACCCTTAAGGTACCTTCCAGTTTTCAAATGGTTAGTTTTACAAGATTGACTACAGAAATAGGTCCTCTCATTGAAATTTATGTCGCCTTGTTATTTTGAAATTTTGTATCTATAACTCTCTTTATAATGTTAAAAAATCTTCAGTTTTCCACTTAATATATAAACAGAGATATAAAAACAAAATTTGACCCAGATGAGGTTCTGTGAAATTTCAACATGAGATAATCCAGTCCCTTTTCAGCATAGAATGATTATCCAGATTTCAGTGGTGGAAACATTATTCATTTGTTGGTTGAGTTTAATAAATTGTGAAGCTGAAGGTACTGAACTTATTCACTATATTTCAGGCGGGCCAAGAATCCTTCAGATCTATCACAAGGTCATATTACAGAGGGGCTGCAGGTGCACTGCTTGTTTATGATATAACCAGGTATCCTCAAGCTTTGACTTCTATTATCTGAGTTTGAAATCCCAAAATACAATAATTATTTTCACTTAAAATTAAAGAAGCAATACATTGTGGGGGGATGATGAAAATCACTGGGACAAGTCATGAATGGAGTCGCTCGTATTAGACTATAAGTTACTCGGTTTGATTGTCTCTTAAATAATCTCACCAAAGTTTGGAAGAAAAGAGAGACACCATCGTCCGATGGCACTTAGCTAAGAATGATCTTCCTTAGGGTTAGGAACTACACCTGCCGCCACTTCACAGTCCATCTCAACGATTACATGAAATATTAATGTTATATCTTCCAGTTGCTTGAAATATGATTTGCAAATCATTTTGGTCTGTTTATTTCTAAAATGCAACTGTTTAAATACAATTTCATAACTTGGGCTAAATAGCTTTTAGATTTTTTCTAGGGAAGATATGACGAGTTTGTCCAACAAAAATCAATTTATTGAAAAACATTGATAACACGCATTTTGAGTTTTTATATGCCTTGGGAGATACATGTTTTGAGTGCATCCAATTTAATGGAACAACATACTATGTGGGACAATTTTGATGCATGGATGCCTATGTAGTTTCATGTTAGTTTTATGTGTTGTTTAATGTAAATAAGGCACAATATAAACAATCCTGACCCTGTGTTTATGAATAGGAGGGAGACATTTAATCACTTAGCTAGCTGGTTGGAAGATGCAAGGCAGCATGCAAATGCAAATATGACAATTATGCTGATTGGCAACAAGTGTGATCTTGCTCACAGACGGGCTGTAAGCACGGAAGAAGGTGAACAGTTTGCAAAGGAGAACGGGTTGATCTTCATGGAGGCCTCGGCAAAAACTGCTCAGAATGTTGAAGAGGTCAGAACTCACATCATATCTATTGTTTTCTTCATTTATTTCCCATCCACCCTCCCACAAGGAAAGCCAGATTTTATACATAACAGGTTCTAGGTTGAATATTTTGGAAAATTATCTGTATAAAAGTTTTAATATAACCTATCCTTTTACAGGCATTCATAAAAACAGCTGGAACCATATACAAAAAGATTCAGGATGGAGTTTTTGATGTATCGAATGAGGTTAGTTTCTTTTTTCATTTTTTTAGATTTGTCATTCTTTACCTCGGGTGTTTTGTCACTTCATTATTAATATCATTAAGAATTTGTGGGATATTCAATTTCACTGTGTCCTTTATTTTTGTAATACAATCTGTGTATGTTTCAAGGGAAGGCTAATGATTATTATAGAAAAGTGTAGCTCTTCTGGAGTTAATGATTATTATAAGGCTAATGATTATCCAACAAACAAGTCACTGATAATTTTCATATGCTTGCAGTCTTATGGAATAAAAGTAGGATATGGTGGAATTCCTGGACCATCTGGAGGTAGGGATGGACCTTCTGCTGCGGGTGGAGGCTGCTGCAGTTGA
Protein sequence

>MS.gene003158.t1

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS