AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048286

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048286.t1 MTR_2g027660 100.000 211 0 0 1 211 1 211 7.47e-160 440
MS.gene048286.t1 MTR_6g021790 88.626 211 24 0 1 211 1 211 5.84e-140 390
MS.gene048286.t1 MTR_8g031680 68.720 211 65 1 1 211 1 210 5.91e-105 301
MS.gene048286.t1 MTR_8g031660 66.351 211 66 1 1 211 1 206 3.48e-104 299
MS.gene048286.t1 MTR_8g031870 78.049 164 36 0 1 164 1 164 6.10e-95 275
MS.gene048286.t1 MTR_8g031830 64.019 214 58 3 1 211 1 198 1.53e-94 274
MS.gene048286.t1 MTR_2g014990 48.095 210 105 2 3 211 10 216 2.54e-66 203
MS.gene048286.t1 MTR_4g088090 47.619 210 106 2 3 211 10 216 1.95e-65 201
MS.gene048286.t1 MTR_2g005510 53.073 179 84 0 3 181 12 190 1.31e-64 199
MS.gene048286.t1 MTR_4g079350 47.143 210 107 2 3 211 10 216 1.94e-64 199
MS.gene048286.t1 MTR_2g075950 46.479 213 104 2 3 211 10 216 2.58e-64 198
MS.gene048286.t1 MTR_1g052475 50.000 178 89 0 5 182 14 191 9.88e-64 197
MS.gene048286.t1 MTR_2g083860 55.621 169 75 0 3 171 10 178 2.48e-63 196
MS.gene048286.t1 MTR_0262s0050 53.333 165 77 0 5 169 14 178 4.85e-63 195
MS.gene048286.t1 MTR_2g090865 46.009 213 104 2 3 211 8 213 1.26e-61 191
MS.gene048286.t1 MTR_7g081700 45.933 209 101 1 3 211 5 201 3.27e-61 190
MS.gene048286.t1 MTR_4g064897 45.755 212 106 3 3 211 9 214 6.11e-61 189
MS.gene048286.t1 MTR_1g115325 46.890 209 104 3 3 210 12 214 6.89e-61 189
MS.gene048286.t1 MTR_8g089985 44.444 216 102 4 5 210 16 223 8.33e-61 189
MS.gene048286.t1 MTR_3g069510 46.226 212 106 2 3 211 9 215 9.43e-61 189
MS.gene048286.t1 MTR_3g086980 46.193 197 101 2 5 196 15 211 2.33e-60 188
MS.gene048286.t1 MTR_7g405790 43.541 209 114 2 5 211 14 220 5.86e-59 185
MS.gene048286.t1 MTR_7g100020 49.733 187 91 2 3 188 12 196 6.58e-59 184
MS.gene048286.t1 MTR_1g068740 45.455 209 107 4 3 210 12 214 7.75e-59 184
MS.gene048286.t1 MTR_8g006970 53.333 165 77 0 3 167 5 169 1.26e-58 182
MS.gene048286.t1 MTR_1g068730 44.976 209 108 4 3 210 12 214 2.83e-58 183
MS.gene048286.t1 MTR_8g006970 46.377 207 100 2 5 211 21 216 4.27e-58 182
MS.gene048286.t1 MTR_2g005500 50.296 169 84 0 3 171 6 174 5.15e-58 182
MS.gene048286.t1 MTR_8g036220 51.829 164 79 0 5 168 15 178 6.79e-58 182
MS.gene048286.t1 MTR_7g051940 44.928 207 111 1 5 211 12 215 1.09e-57 181
MS.gene048286.t1 MTR_8g027220 53.165 158 74 0 5 162 25 182 7.36e-57 180
MS.gene048286.t1 MTR_6g079550 45.894 207 110 1 5 211 11 215 5.01e-56 177
MS.gene048286.t1 MTR_1g078200 43.128 211 116 1 5 211 13 223 7.12e-56 177
MS.gene048286.t1 MTR_4g063160 45.024 211 106 4 3 210 12 215 8.83e-56 176
MS.gene048286.t1 MTR_8g107070 48.223 197 93 2 5 200 13 201 3.37e-52 169
MS.gene048286.t1 MTR_2g096550 45.714 175 93 2 2 174 11 185 4.55e-51 164
MS.gene048286.t1 MTR_7g103070 45.455 209 99 6 7 211 17 214 3.00e-50 162
MS.gene048286.t1 MTR_8g093740 42.925 212 104 6 3 210 10 208 5.03e-50 162
MS.gene048286.t1 MTR_1g029450 42.925 212 107 6 3 211 14 214 9.73e-49 159
MS.gene048286.t1 MTR_3g096350 49.375 160 78 3 3 160 9 167 2.32e-48 157
MS.gene048286.t1 MTR_8g031810 67.890 109 21 1 1 109 1 95 2.60e-48 153
MS.gene048286.t1 MTR_8g103550 43.210 162 92 0 8 169 11 172 7.62e-48 155
MS.gene048286.t1 MTR_7g117910 50.704 142 70 0 5 146 19 160 5.03e-47 154
MS.gene048286.t1 MTR_3g064390 43.312 157 89 0 8 164 12 168 1.04e-46 153
MS.gene048286.t1 MTR_2g102060 43.791 153 86 0 8 160 12 164 1.18e-46 153
MS.gene048286.t1 MTR_4g099470 43.678 174 86 1 38 211 16 177 1.38e-46 152
MS.gene048286.t1 MTR_5g076590 42.500 160 92 0 8 167 12 171 3.56e-46 151
MS.gene048286.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 3.96e-46 151
MS.gene048286.t1 MTR_1g094220 41.772 158 91 1 8 164 33 190 4.16e-46 151
MS.gene048286.t1 MTR_1g090717 49.693 163 77 4 2 160 11 172 5.70e-46 151
MS.gene048286.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 8.17e-46 151
MS.gene048286.t1 MTR_1g062760 48.235 170 83 4 3 169 11 178 1.42e-45 150
MS.gene048286.t1 MTR_1g094220 42.208 154 88 1 8 160 33 186 1.74e-45 151
MS.gene048286.t1 MTR_1g068730 53.543 127 59 0 3 129 12 138 6.71e-45 147
MS.gene048286.t1 MTR_1g068740 53.543 127 59 0 3 129 12 138 8.53e-45 148
MS.gene048286.t1 MTR_4g098950 34.286 210 119 2 7 210 10 206 6.00e-44 146
MS.gene048286.t1 MTR_8g090215 38.509 161 99 0 7 167 10 170 4.01e-43 144
MS.gene048286.t1 MTR_3g087160 35.912 181 111 1 7 182 10 190 9.78e-43 143
MS.gene048286.t1 MTR_5g013900 36.264 182 110 1 7 182 10 191 3.93e-42 141
MS.gene048286.t1 MTR_8g093740 41.243 177 88 5 38 210 11 175 1.18e-37 129
MS.gene048286.t1 MTR_3g096350 45.578 147 77 3 3 147 9 154 3.46e-37 127
MS.gene048286.t1 MTR_7g103070 42.353 170 81 4 47 211 1 158 1.60e-36 125
MS.gene048286.t1 MTR_3g096350 50.820 122 57 3 3 122 9 129 2.07e-36 125
MS.gene048286.t1 MTR_4g069850 36.683 199 116 4 6 197 8 203 2.88e-34 121
MS.gene048286.t1 MTR_8g092020 37.952 166 96 2 6 164 12 177 6.68e-34 120
MS.gene048286.t1 MTR_3g064390 40.800 125 74 0 8 132 12 136 1.20e-33 118
MS.gene048286.t1 MTR_1g097420 34.597 211 118 6 6 209 8 205 3.21e-33 119
MS.gene048286.t1 MTR_6g039490 38.095 168 97 3 6 166 8 175 1.10e-31 115
MS.gene048286.t1 MTR_2g101890 37.654 162 94 3 6 160 10 171 1.92e-31 114
MS.gene048286.t1 MTR_4g012940 37.654 162 94 3 6 160 8 169 5.28e-31 113
MS.gene048286.t1 MTR_2g005500 35.503 169 69 1 3 171 6 134 4.13e-29 107
MS.gene048286.t1 MTR_1g097420 33.333 210 118 7 7 209 38 232 4.84e-28 106
MS.gene048286.t1 MTR_2g090875 31.977 172 103 5 1 160 1 170 4.68e-25 97.4
MS.gene048286.t1 MTR_6g087980 32.558 172 102 5 1 160 1 170 4.54e-24 95.1
MS.gene048286.t1 MTR_4g088055 31.395 172 104 5 1 160 1 170 7.80e-24 94.0
MS.gene048286.t1 MTR_4g073250 32.558 172 102 6 1 160 1 170 1.99e-22 90.5
MS.gene048286.t1 MTR_3g078260 30.168 179 111 5 6 172 8 184 1.55e-21 88.6
MS.gene048286.t1 MTR_3g107707 31.646 158 105 2 7 164 14 168 3.65e-21 87.8
MS.gene048286.t1 MTR_3g107717 31.646 158 105 2 7 164 14 168 3.80e-21 87.8
MS.gene048286.t1 MTR_3g107713 31.646 158 105 2 7 164 14 168 4.27e-21 87.4
MS.gene048286.t1 MTR_8g075240 28.488 172 109 5 1 160 1 170 1.14e-20 85.9
MS.gene048286.t1 MTR_5g022600 27.907 172 110 5 1 160 1 170 5.94e-20 84.0
MS.gene048286.t1 MTR_1452s0010 38.043 92 57 0 26 117 1 92 7.96e-18 75.9
MS.gene048286.t1 MTR_1686s0010 35.870 92 59 0 26 117 1 92 1.04e-16 72.8
MS.gene048286.t1 MTR_2g078000 45.902 61 28 1 68 128 47 102 2.87e-14 66.6
MS.gene048286.t1 MTR_4g113620 27.329 161 105 3 7 167 14 162 3.56e-14 68.9
MS.gene048286.t1 MTR_3g078260 29.310 116 79 3 6 120 8 121 1.03e-13 66.2
MS.gene048286.t1 MTR_1g069245 45.333 75 40 1 38 112 125 198 1.57e-13 67.4
MS.gene048286.t1 MTR_1g059590 32.075 159 98 5 2 160 427 575 4.03e-12 65.1
MS.gene048286.t1 MTR_1g059590 32.075 159 98 5 2 160 394 542 4.04e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048286.t1 AT4G17170 97.143 210 6 0 1 210 1 210 7.64e-155 427
MS.gene048286.t1 AT4G35860 85.238 210 31 0 1 210 1 210 1.25e-136 381
MS.gene048286.t1 AT4G17160 78.673 211 37 2 1 210 1 204 8.15e-121 341
MS.gene048286.t1 AT4G35860 81.707 164 30 0 47 210 1 164 1.50e-100 288
MS.gene048286.t1 AT5G45750 46.479 213 103 2 3 211 10 215 7.10e-66 202
MS.gene048286.t1 AT5G60860 48.095 210 105 2 3 211 10 216 8.82e-66 202
MS.gene048286.t1 AT3G12160 47.393 211 101 2 5 210 14 219 2.30e-64 199
MS.gene048286.t1 AT4G18430 48.095 210 105 2 3 211 10 216 3.63e-64 198
MS.gene048286.t1 AT3G15060 47.368 209 108 1 3 211 10 216 7.95e-64 197
MS.gene048286.t1 AT2G33870 47.664 214 101 3 3 211 10 217 1.28e-63 196
MS.gene048286.t1 AT5G47960 48.077 208 105 2 5 210 14 220 3.99e-63 196
MS.gene048286.t1 AT1G28550 47.664 214 101 3 3 211 10 217 4.34e-63 195
MS.gene048286.t1 AT1G06400 47.418 213 101 2 3 211 10 215 1.64e-62 194
MS.gene048286.t1 AT4G39990 46.698 212 103 3 5 211 16 222 2.25e-62 194
MS.gene048286.t1 AT1G07410 45.755 212 105 2 3 211 9 213 3.31e-62 193
MS.gene048286.t1 AT4G18800 45.972 211 105 2 3 211 10 213 4.64e-62 192
MS.gene048286.t1 AT1G16920 53.293 167 78 0 3 169 10 176 7.72e-62 192
MS.gene048286.t1 AT1G02130 45.933 209 102 1 3 211 5 202 1.22e-61 191
MS.gene048286.t1 AT4G17530 46.411 209 100 2 3 211 5 201 1.45e-61 191
MS.gene048286.t1 AT1G09630 45.455 209 112 1 3 211 9 215 3.11e-61 191
MS.gene048286.t1 AT5G65270 46.479 213 106 3 5 211 16 226 1.00e-60 189
MS.gene048286.t1 AT3G46830 53.846 169 78 0 3 171 9 177 1.04e-60 189
MS.gene048286.t1 AT3G46830 53.846 169 78 0 3 171 9 177 1.04e-60 189
MS.gene048286.t1 AT5G59150 45.755 212 108 2 3 211 9 216 7.23e-60 187
MS.gene048286.t1 AT3G11730 47.847 209 98 3 3 210 5 203 8.13e-60 186
MS.gene048286.t1 AT5G47200 45.933 209 101 2 3 211 5 201 8.43e-60 186
MS.gene048286.t1 AT3G09900 45.714 210 108 3 3 211 12 216 9.41e-59 184
MS.gene048286.t1 AT5G59840 46.411 209 105 3 3 210 12 214 2.36e-58 183
MS.gene048286.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene048286.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene048286.t1 AT3G46060 46.411 209 105 3 3 210 12 214 2.84e-58 183
MS.gene048286.t1 AT2G43130 45.411 207 109 2 5 211 11 213 3.11e-58 183
MS.gene048286.t1 AT5G03520 45.714 210 106 3 3 211 12 214 3.89e-58 182
MS.gene048286.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene048286.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene048286.t1 AT3G53610 44.976 209 108 3 3 210 12 214 1.13e-57 181
MS.gene048286.t1 AT5G47520 46.047 215 101 3 5 211 13 220 1.03e-56 179
MS.gene048286.t1 AT3G07410 43.961 207 115 1 5 211 11 216 1.60e-56 178
MS.gene048286.t1 AT1G05810 42.788 208 116 2 5 211 11 216 3.28e-56 178
MS.gene048286.t1 AT2G31680 44.019 209 113 2 5 211 11 217 4.48e-56 177
MS.gene048286.t1 AT1G05810 42.788 208 116 2 5 211 57 262 8.57e-56 178
MS.gene048286.t1 AT1G18200 47.668 193 94 1 5 190 12 204 3.64e-55 176
MS.gene048286.t1 AT1G73640 51.497 167 81 0 5 171 12 178 2.09e-54 174
MS.gene048286.t1 AT1G01200 49.405 168 84 1 5 171 27 194 6.52e-54 172
MS.gene048286.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene048286.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene048286.t1 AT1G43890 51.875 160 74 3 3 160 10 168 8.05e-51 164
MS.gene048286.t1 AT5G45130 38.235 204 111 3 8 211 12 200 1.07e-46 153
MS.gene048286.t1 AT5G03530 49.123 171 80 4 3 169 10 177 1.52e-46 153
MS.gene048286.t1 AT5G03530 49.123 171 80 4 3 169 10 177 1.52e-46 153
MS.gene048286.t1 AT4G19640 42.675 157 90 0 8 164 12 168 4.44e-46 151
MS.gene048286.t1 AT5G45130 38.119 202 110 4 10 211 22 208 6.89e-46 151
MS.gene048286.t1 AT3G54840 41.558 154 89 1 8 160 35 188 1.49e-44 147
MS.gene048286.t1 AT3G54840 41.558 154 89 1 8 160 35 188 1.73e-44 147
MS.gene048286.t1 AT3G54840 41.447 152 88 1 10 160 3 154 2.94e-44 145
MS.gene048286.t1 AT5G59150 44.910 167 85 2 48 211 3 165 9.63e-44 144
MS.gene048286.t1 AT4G39890 40.123 162 96 1 7 167 10 171 1.12e-43 145
MS.gene048286.t1 AT5G10260 38.509 161 99 0 7 167 10 170 1.41e-43 145
MS.gene048286.t1 AT5G03520 43.023 172 90 3 41 211 40 204 2.59e-43 144
MS.gene048286.t1 AT2G22290 37.267 161 101 0 7 167 10 170 2.25e-41 139
MS.gene048286.t1 AT2G44610 34.615 182 113 1 7 182 10 191 1.90e-40 137
MS.gene048286.t1 AT5G64990 37.888 161 100 0 7 167 8 168 3.40e-40 136
MS.gene048286.t1 AT3G09910 43.429 175 92 4 3 173 10 181 1.39e-38 132
MS.gene048286.t1 AT3G09910 43.429 175 92 4 3 173 10 181 1.39e-38 132
MS.gene048286.t1 AT5G64990 36.310 168 100 1 7 167 8 175 2.03e-37 129
MS.gene048286.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene048286.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene048286.t1 AT3G09910 44.379 169 87 4 3 167 10 175 2.72e-37 129
MS.gene048286.t1 AT3G18820 40.123 162 90 3 6 160 8 169 2.54e-34 121
MS.gene048286.t1 AT2G21880 39.157 166 94 3 6 164 9 174 9.48e-34 120
MS.gene048286.t1 AT1G22740 37.423 163 95 3 6 161 8 170 3.37e-33 118
MS.gene048286.t1 AT4G09720 38.690 168 96 3 6 166 8 175 3.80e-33 118
MS.gene048286.t1 AT5G39620 38.182 165 95 3 7 164 6 170 4.88e-33 118
MS.gene048286.t1 AT4G19640 38.583 127 78 0 8 134 12 138 8.35e-33 115
MS.gene048286.t1 AT1G52280 38.889 162 92 3 6 160 8 169 1.02e-32 117
MS.gene048286.t1 AT1G49300 38.650 163 93 3 6 161 8 170 1.08e-32 117
MS.gene048286.t1 AT1G49300 38.650 163 93 3 6 161 8 170 1.08e-32 117
MS.gene048286.t1 AT4G19640 38.168 131 81 0 8 138 12 142 1.35e-32 116
MS.gene048286.t1 AT4G09720 38.728 173 94 4 6 166 8 180 4.16e-32 116
MS.gene048286.t1 AT4G09720 37.430 179 94 4 6 166 8 186 3.74e-31 114
MS.gene048286.t1 AT3G16100 37.654 162 94 3 6 160 8 169 6.06e-31 112
MS.gene048286.t1 AT2G21880 37.415 147 85 3 25 164 3 149 1.58e-25 98.2
MS.gene048286.t1 AT2G21880 37.415 147 85 3 25 164 3 149 1.58e-25 98.2
MS.gene048286.t1 AT5G46025 44.340 106 58 1 67 171 5 110 7.51e-25 94.4
MS.gene048286.t1 AT2G21880 34.337 166 94 4 6 164 9 166 5.14e-24 94.7
MS.gene048286.t1 AT4G28950 31.765 170 104 5 1 160 1 168 6.67e-24 94.7
MS.gene048286.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene048286.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene048286.t1 AT4G35020 33.140 172 101 5 1 160 1 170 8.29e-24 94.4
MS.gene048286.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene048286.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene048286.t1 AT4G09720 38.235 136 77 3 38 166 6 141 3.15e-23 92.0
MS.gene048286.t1 AT1G75840 30.814 172 105 5 1 160 1 170 5.16e-23 92.0
MS.gene048286.t1 AT5G45970 30.814 172 105 5 1 160 1 170 1.02e-22 91.3
MS.gene048286.t1 AT2G44690 31.737 167 100 5 6 160 18 182 2.37e-22 90.5
MS.gene048286.t1 AT1G20090 29.940 167 103 5 6 160 5 169 5.98e-22 89.4
MS.gene048286.t1 AT5G20020 31.646 158 105 2 7 164 14 168 3.33e-21 87.8
MS.gene048286.t1 AT5G55190 31.646 158 105 2 7 164 14 168 4.20e-21 87.8
MS.gene048286.t1 AT5G20010 31.646 158 105 2 7 164 14 168 4.33e-21 87.4
MS.gene048286.t1 AT3G51300 28.488 172 109 5 1 160 1 170 8.63e-21 86.3
MS.gene048286.t1 AT3G48040 30.409 171 105 5 2 160 4 172 1.15e-20 86.3
MS.gene048286.t1 AT5G55080 30.435 161 109 2 7 167 14 171 2.43e-20 85.5
MS.gene048286.t1 AT2G17800 28.488 172 109 5 1 160 1 170 6.91e-20 84.0
MS.gene048286.t1 AT2G17800 28.488 172 109 5 1 160 1 170 6.91e-20 84.0
MS.gene048286.t1 AT5G62880 29.825 171 106 5 2 160 4 172 8.51e-20 84.0
MS.gene048286.t1 AT4G35950 27.907 172 110 5 1 160 1 170 3.37e-19 82.0
MS.gene048286.t1 AT5G62880 29.518 166 103 5 6 159 8 171 4.47e-18 79.0
MS.gene048286.t1 AT3G48040 29.814 161 99 5 6 154 8 166 6.52e-18 78.2
MS.gene048286.t1 AT4G35020 33.058 121 78 3 1 120 1 119 5.62e-16 72.4
MS.gene048286.t1 AT4G35020 33.058 121 78 3 1 120 1 119 5.62e-16 72.4
MS.gene048286.t1 AT4G08190 48.438 64 30 1 97 160 67 127 3.45e-12 61.6
MS.gene048286.t1 AT3G51290 26.400 125 79 4 48 160 648 771 8.31e-11 61.2

Find 53 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCAATCAAGTTGCAAATA+TGG 0.213769 2.3:-61813256 MS.gene048286:CDS
TTCATATGCTTGCAGTCTTA+TGG 0.237130 2.3:-61810777 MS.gene048286:intron
TTGACCATCGGTGTTGAATT+TGG 0.325534 2.3:-61813305 MS.gene048286:CDS
GTAGGATATGGTGGAATTCC+TGG 0.331205 2.3:-61810747 MS.gene048286:CDS
TACATCATCATCGGCGATAC+TGG 0.349931 2.3:-61814059 MS.gene048286:intron
TCCCATATTTGCAACTTGAT+TGG 0.374477 2.3:+61813254 None:intergenic
GGACCTTCTGCTGCGGGTGG+AGG 0.381621 2.3:-61810705 MS.gene048286:CDS
GGTGGAATTCCTGGACCATC+TGG 0.390111 2.3:-61810738 MS.gene048286:CDS
GGAGAACGGGTTGATCTTCA+TGG 0.402006 2.3:-61811279 MS.gene048286:CDS
GCCAATCAAGTTGCAAATAT+GGG 0.406809 2.3:-61813255 MS.gene048286:CDS
AACAGTTTGCAAAGGAGAAC+GGG 0.430066 2.3:-61811292 MS.gene048286:CDS
TATTATCAATCGTGATCATC+CGG 0.441090 2.3:+61813279 None:intergenic
TATGGAATAAAAGTAGGATA+TGG 0.443999 2.3:-61810759 MS.gene048286:CDS
CATTTAATCACTTAGCTAGC+TGG 0.445587 2.3:-61811418 MS.gene048286:CDS
AGGGATGGACCTTCTGCTGC+GGG 0.454453 2.3:-61810711 MS.gene048286:CDS
AACGGGTTGAAAGCGCTTGT+CGG 0.488058 2.3:+61813334 None:intergenic
CCGATGGTCAAGTCATGAAC+GGG 0.494454 2.3:+61813317 None:intergenic
GTTGATCTTCATGGAGGCCT+CGG 0.495654 2.3:-61811270 MS.gene048286:CDS
AATATGACAATTATGCTGAT+TGG 0.496339 2.3:-61811365 MS.gene048286:CDS
TCATATTACAGAGGGGCTGC+AGG 0.497225 2.3:-61812144 MS.gene048286:CDS
GGAATAAAAGTAGGATATGG+TGG 0.505694 2.3:-61810756 MS.gene048286:CDS
CAGTCTTATGGAATAAAAGT+AGG 0.507290 2.3:-61810765 MS.gene048286:CDS
TCCTGGACCATCTGGAGGTA+GGG 0.509121 2.3:-61810730 MS.gene048286:CDS
CAGCCTCCACCCGCAGCAGA+AGG 0.513447 2.3:+61810702 None:intergenic
GATGGACCTTCTGCTGCGGG+TGG 0.534861 2.3:-61810708 MS.gene048286:CDS
GAACAGTTTGCAAAGGAGAA+CGG 0.544908 2.3:-61811293 MS.gene048286:CDS
AACTGCTCAGAATGTTGAAG+AGG 0.551651 2.3:-61811243 MS.gene048286:intron
CTCTTCAAATACATCATCAT+CGG 0.552415 2.3:-61814068 MS.gene048286:CDS
TGACCTTGTGATAGATCTGA+AGG 0.556542 2.3:+61812164 None:intergenic
GGACCATCTGGAGGTAGGGA+TGG 0.558951 2.3:-61810726 MS.gene048286:CDS
TCCCTACCTCCAGATGGTCC+AGG 0.559719 2.3:+61810729 None:intergenic
TAATCACTTAGCTAGCTGGT+TGG 0.562132 2.3:-61811414 MS.gene048286:CDS
GTGTGATCTTGCTCACAGAC+GGG 0.563085 2.3:-61811336 MS.gene048286:CDS
CCCGTTCATGACTTGACCAT+CGG 0.566895 2.3:-61813317 MS.gene048286:CDS
TGCTTGTTTATGATATAACC+AGG 0.573499 2.3:-61812116 MS.gene048286:intron
TCGGTGTTGAATTTGGTGCC+CGG 0.576405 2.3:-61813298 MS.gene048286:CDS
TCACAAGGTCATATTACAGA+GGG 0.579518 2.3:-61812152 MS.gene048286:CDS
CGATGATGATGTATTTGAAG+AGG 0.579909 2.3:+61814069 None:intergenic
ATTATCAATCGTGATCATCC+GGG 0.581341 2.3:+61813280 None:intergenic
ACCGATGGTCAAGTCATGAA+CGG 0.581870 2.3:+61813316 None:intergenic
CGGGCTGTAAGCACAGAAGA+AGG 0.584016 2.3:-61811317 MS.gene048286:CDS
AGTGTGATCTTGCTCACAGA+CGG 0.590726 2.3:-61811337 MS.gene048286:CDS
AGAAGGTGAACAGTTTGCAA+AGG 0.595205 2.3:-61811300 MS.gene048286:CDS
TTCCTGGACCATCTGGAGGT+AGG 0.607438 2.3:-61810731 MS.gene048286:CDS
TAGGGATGGACCTTCTGCTG+CGG 0.608244 2.3:-61810712 MS.gene048286:CDS
CTAGCTGGTTGGAAGATGCA+AGG 0.612086 2.3:-61811403 MS.gene048286:CDS
GGCACCAAATTCAACACCGA+TGG 0.616278 2.3:+61813301 None:intergenic
GGAATTCCTGGACCATCTGG+AGG 0.651030 2.3:-61810735 MS.gene048286:CDS
GGTCCATCCCTACCTCCAGA+TGG 0.660882 2.3:+61810723 None:intergenic
ATCACAAGGTCATATTACAG+AGG 0.688361 2.3:-61812153 MS.gene048286:CDS
AATCCTTCAGATCTATCACA+AGG 0.690302 2.3:-61812167 MS.gene048286:CDS
CACAAGGTCATATTACAGAG+GGG 0.730372 2.3:-61812151 MS.gene048286:CDS
GAACGGGTTGATCTTCATGG+AGG 0.745466 2.3:-61811276 MS.gene048286:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATACATGAAATAAATTTA+TGG - chr2.3:61812105-61812124 MS.gene048286:intron 10.0%
!!! GAAAATAATTATTGTATTTT+GGG + chr2.3:61812724-61812743 None:intergenic 10.0%
!!! TGAAAATAATTATTGTATTT+TGG + chr2.3:61812725-61812744 None:intergenic 10.0%
!! AAATAAAAAGAGATTAGAAA+GGG + chr2.3:61810762-61810781 None:intergenic 15.0%
!! AGATTGTATTACAAAAATAA+AGG + chr2.3:61813868-61813887 None:intergenic 15.0%
!! TAAATAAAAAGAGATTAGAA+AGG + chr2.3:61810763-61810782 None:intergenic 15.0%
!! TAAATACAATTTCATAACTT+GGG - chr2.3:61813058-61813077 MS.gene048286:intron 15.0%
!! TACAAAATTTCAAAATAACA+AGG + chr2.3:61811949-61811968 None:intergenic 15.0%
!! TTAAATACAATTTCATAACT+TGG - chr2.3:61813057-61813076 MS.gene048286:intron 15.0%
!!! AAAGATTTTATCTAATAGAT+GGG - chr2.3:61812190-61812209 MS.gene048286:intron 15.0%
!!! ATTTATTCATTTTTCTTTTC+AGG - chr2.3:61810849-61810868 MS.gene048286:intron 15.0%
!!! CATTATTTTTATGTAGTTTA+GGG - chr2.3:61811133-61811152 MS.gene048286:intron 15.0%
!!! TAAAGTGATAGTTTATTTTA+TGG - chr2.3:61811166-61811185 MS.gene048286:intron 15.0%
!!! TAAATGGATTATATATTAAG+TGG + chr2.3:61812012-61812031 None:intergenic 15.0%
!!! TAATTATGTAGTTTAAGTTT+TGG - chr2.3:61811325-61811344 MS.gene048286:CDS 15.0%
!!! TACACAATTTTTTCAAAATA+AGG + chr2.3:61811387-61811406 None:intergenic 15.0%
!!! TCATTATTTTTATGTAGTTT+AGG - chr2.3:61811132-61811151 MS.gene048286:intron 15.0%
!!! TTATTTTGAAAAAATTGTGT+AGG - chr2.3:61811386-61811405 MS.gene048286:CDS 15.0%
!!! TTCAATAAATTGATTTTTGT+TGG + chr2.3:61813130-61813149 None:intergenic 15.0%
!!! TTTATTCATTTTTCTTTTCA+GGG - chr2.3:61810850-61810869 MS.gene048286:intron 15.0%
!! AAATGAAGAAAACAATAGAT+AGG + chr2.3:61813571-61813590 None:intergenic 20.0%
!! AATAAAAAGAGATTAGAAAG+GGG + chr2.3:61810761-61810780 None:intergenic 20.0%
!! AATACAAACTAAACGAAATA+AGG + chr2.3:61811301-61811320 None:intergenic 20.0%
!! ATCTCTGTTTATATATTAAG+TGG + chr2.3:61812402-61812421 None:intergenic 20.0%
!! TGAAACAAAACTAACAATAA+AGG + chr2.3:61811233-61811252 None:intergenic 20.0%
!!! AGTTTATTTTATGGACTAAA+TGG - chr2.3:61811175-61811194 MS.gene048286:intron 20.0%
!!! ATATGATTTGCAAATCATTT+TGG - chr2.3:61813019-61813038 MS.gene048286:intron 20.0%
!!! ATCATTTTATGTTGATTCAT+TGG - chr2.3:61811765-61811784 MS.gene048286:intron 20.0%
!!! ATTCAATTTTGTTATTGTGA+TGG - chr2.3:61811205-61811224 MS.gene048286:intron 20.0%
!!! GAAAGATTTTATCTAATAGA+TGG - chr2.3:61812189-61812208 MS.gene048286:intron 20.0%
!!! TAGCTTTTAGATTTTTTCTA+AGG - chr2.3:61813086-61813105 MS.gene048286:intron 20.0%
!!! TGTGTTGTTTAATGTAAATA+AGG - chr2.3:61813288-61813307 MS.gene048286:CDS 20.0%
! AAAAATAATGAATAGTGCGA+TGG + chr2.3:61811123-61811142 None:intergenic 25.0%
! AAAACTAACCATTTGAAAAC+TGG + chr2.3:61812266-61812285 None:intergenic 25.0%
! AAACTAACATGAAACTACAT+AGG + chr2.3:61813266-61813285 None:intergenic 25.0%
! AACCATATACAAAAAGATTC+AGG - chr2.3:61813727-61813746 MS.gene048286:intron 25.0%
! AACCTGTTATGTATAAAATC+TGG + chr2.3:61813623-61813642 None:intergenic 25.0%
! AATATGACAATTATGCTGAT+TGG - chr2.3:61813410-61813429 MS.gene048286:intron 25.0%
! AGATTTGTAATTCTTTACCT+CGG - chr2.3:61813800-61813819 MS.gene048286:intron 25.0%
! AGTATGTTGTTCCATTAAAT+TGG + chr2.3:61813216-61813235 None:intergenic 25.0%
! ATAATCATTCTATGCTGAAA+AGG + chr2.3:61812486-61812505 None:intergenic 25.0%
! ATATACAAAAAGATTCAGGA+TGG - chr2.3:61813731-61813750 MS.gene048286:intron 25.0%
! ATTAAAGAAGCAATACATTG+TGG - chr2.3:61812751-61812770 MS.gene048286:intron 25.0%
! CTCAACAATGTAAATGTAAA+TGG + chr2.3:61812028-61812047 None:intergenic 25.0%
! GAAAAATGAATAAATCCGAT+CGG + chr2.3:61810844-61810863 None:intergenic 25.0%
! GAACTTATTCACTATATTTC+AGG - chr2.3:61812576-61812595 MS.gene048286:intron 25.0%
! GATTGACTACAGAAATAAAT+AGG - chr2.3:61812290-61812309 MS.gene048286:intron 25.0%
! GTATTAGACTATAAGTTACT+CGG - chr2.3:61812819-61812838 MS.gene048286:intron 25.0%
! GTATTTAGTAGTAGTTAATG+AGG - chr2.3:61811002-61811021 MS.gene048286:intron 25.0%
! TAAATAATCTCACCAAAGTT+TGG - chr2.3:61812855-61812874 MS.gene048286:intron 25.0%
! TAATCATTCTATGCTGAAAA+GGG + chr2.3:61812485-61812504 None:intergenic 25.0%
! TATGGAATAAAAGTAGGATA+TGG - chr2.3:61814016-61814035 MS.gene048286:intron 25.0%
! TGGAAACATTATTCATTTGT+TGG - chr2.3:61812520-61812539 MS.gene048286:intron 25.0%
! TTAAAGAAGCAATACATTGT+GGG - chr2.3:61812752-61812771 MS.gene048286:intron 25.0%
! TTAATAAATTGTGAAGCTGA+AGG - chr2.3:61812549-61812568 MS.gene048286:intron 25.0%
! TTTATACATAACAGGTTCTT+AGG - chr2.3:61813626-61813645 MS.gene048286:intron 25.0%
! TTTATGTAGTTTAGGGAAAT+TGG - chr2.3:61811140-61811159 MS.gene048286:intron 25.0%
!! AATATAACCTATCCTTTTAC+AGG - chr2.3:61813685-61813704 MS.gene048286:intron 25.0%
!! ATCCTGAATCTTTTTGTATA+TGG + chr2.3:61813732-61813751 None:intergenic 25.0%
!! TTTTTATGAATGCCTGTAAA+AGG + chr2.3:61813700-61813719 None:intergenic 25.0%
!!! GAGTATTCTTTGAAACAAAA+TGG + chr2.3:61811904-61811923 None:intergenic 25.0%
!!! GTGTTTTGTTAAGAATTTGT+GGG - chr2.3:61813823-61813842 MS.gene048286:intron 25.0%
!!! TATTTTATGGACTAAATGGA+TGG - chr2.3:61811179-61811198 MS.gene048286:intron 25.0%
!!! TGGAGTTGATGATTATTATT+AGG - chr2.3:61813940-61813959 MS.gene048286:intron 25.0%
!!! TTTGAGTTTTTATATGCCTT+GGG - chr2.3:61813169-61813188 MS.gene048286:intron 25.0%
!!! TTTTGAGTTTTTATATGCCT+TGG - chr2.3:61813168-61813187 MS.gene048286:intron 25.0%
AATGAGAACCTAACTATATG+GGG - chr2.3:61812048-61812067 MS.gene048286:intron 30.0%
AATGATTATCCAGATTTCAG+TGG - chr2.3:61812497-61812516 MS.gene048286:intron 30.0%
AATGGAACAACATACTATGT+GGG - chr2.3:61813220-61813239 MS.gene048286:intron 30.0%
ACAATCTGTGTATGTTTCAA+GGG - chr2.3:61813881-61813900 MS.gene048286:intron 30.0%
AGAATGAGAACCTAACTATA+TGG - chr2.3:61812046-61812065 MS.gene048286:intron 30.0%
AGTATGAACATTGAACAAGT+TGG + chr2.3:61811598-61811617 None:intergenic 30.0%
ATAATAATCATCAACTCCAG+AGG + chr2.3:61813939-61813958 None:intergenic 30.0%
ATAATAGAAGTCAAAGCTTG+AGG + chr2.3:61812688-61812707 None:intergenic 30.0%
ATGCAGATAGGAACTATATT+TGG - chr2.3:61811809-61811828 MS.gene048286:intron 30.0%
ATTTCATGTAATCCTTGAGA+TGG + chr2.3:61812970-61812989 None:intergenic 30.0%
CAAATCATATTTCAAGCAAC+TGG + chr2.3:61813009-61813028 None:intergenic 30.0%
CAACCAAATAGAAATCTTGA+GGG + chr2.3:61811724-61811743 None:intergenic 30.0%
CTCTTCAAATACATCATCAT+CGG - chr2.3:61810707-61810726 MS.gene048286:CDS 30.0%
CTTATTCACTATATTTCAGG+CGG - chr2.3:61812579-61812598 MS.gene048286:intron 30.0%
GAAAAAATTGTGTAGGAGTT+GGG - chr2.3:61811393-61811412 MS.gene048286:CDS 30.0%
GAATGAGAACCTAACTATAT+GGG - chr2.3:61812047-61812066 MS.gene048286:intron 30.0%
GATTTGTAATTCTTTACCTC+GGG - chr2.3:61813801-61813820 MS.gene048286:intron 30.0%
TAAAGAAGCAATACATTGTG+GGG - chr2.3:61812753-61812772 MS.gene048286:intron 30.0%
TAATGGAACAACATACTATG+TGG - chr2.3:61813219-61813238 MS.gene048286:intron 30.0%
TACAATCTGTGTATGTTTCA+AGG - chr2.3:61813880-61813899 MS.gene048286:intron 30.0%
TATTATCAATCGTGATCATC+CGG + chr2.3:61811499-61811518 None:intergenic 30.0%
TCAACCAAATAGAAATCTTG+AGG + chr2.3:61811725-61811744 None:intergenic 30.0%
TCTAAACTAATCTTCTCAAG+TGG - chr2.3:61812150-61812169 MS.gene048286:CDS 30.0%
TGAAAAAATTGTGTAGGAGT+TGG - chr2.3:61811392-61811411 MS.gene048286:CDS 30.0%
TGAAAGAGTTGACAAACATA+CGG + chr2.3:61811549-61811568 None:intergenic 30.0%
TGCTTGTTTATGATATAACC+AGG - chr2.3:61812659-61812678 MS.gene048286:intron 30.0%
TTATTCACTATATTTCAGGC+GGG - chr2.3:61812580-61812599 MS.gene048286:intron 30.0%
TTTGAGTGCATCCAATTTAA+TGG - chr2.3:61813202-61813221 MS.gene048286:intron 30.0%
! AGCCAGATTTTATACATAAC+AGG - chr2.3:61813618-61813637 MS.gene048286:intron 30.0%
! AGTTTTTGATGTATCGAATG+AGG - chr2.3:61813754-61813773 MS.gene048286:intron 30.0%
! CAGTCTTATGGAATAAAAGT+AGG - chr2.3:61814010-61814029 MS.gene048286:intron 30.0%
! TAGGAACTATATTTGGTAGT+AGG - chr2.3:61811816-61811835 MS.gene048286:intron 30.0%
! TATATTTGGTAGTAGGCTTA+GGG - chr2.3:61811823-61811842 MS.gene048286:intron 30.0%
!! GGTGTTTTGTTAAGAATTTG+TGG - chr2.3:61813822-61813841 MS.gene048286:intron 30.0%
!! TATTGTTGATTCTCGTTTCT+AGG - chr2.3:61811647-61811666 MS.gene048286:intron 30.0%
!! TGTAGTTTAAGTTTTGGTAG+TGG - chr2.3:61811331-61811350 MS.gene048286:CDS 30.0%
!! TTCTTTGAAACAAAATGGCA+TGG + chr2.3:61811899-61811918 None:intergenic 30.0%
!!! GGTTCTTAGGTTGAATATTT+TGG - chr2.3:61813639-61813658 MS.gene048286:intron 30.0%
AAAGAAGCAATACATTGTGG+GGG - chr2.3:61812754-61812773 MS.gene048286:intron 35.0%
AAATTTCACAGAACCTCATC+TGG + chr2.3:61812443-61812462 None:intergenic 35.0%
AACAAAATTTGACCCAGATG+AGG - chr2.3:61812427-61812446 MS.gene048286:intron 35.0%
AATCCTTCAGATCTATCACA+AGG - chr2.3:61812608-61812627 MS.gene048286:intron 35.0%
AATTCTTAACAAAACACCCG+AGG + chr2.3:61813820-61813839 None:intergenic 35.0%
AATTTCACAGAACCTCATCT+GGG + chr2.3:61812442-61812461 None:intergenic 35.0%
ACTTTCATCCCCATATAGTT+AGG + chr2.3:61812059-61812078 None:intergenic 35.0%
AGCTAAGAATGATCTTCCTT+AGG - chr2.3:61812912-61812931 MS.gene048286:intron 35.0%
ATATGAAGAGCTATGCAGAT+AGG - chr2.3:61811797-61811816 MS.gene048286:intron 35.0%
ATCACAAGGTCATATTACAG+AGG - chr2.3:61812622-61812641 MS.gene048286:intron 35.0%
ATCTTGAGGGTGAAACTAAA+AGG + chr2.3:61811711-61811730 None:intergenic 35.0%
ATGAATGCCTGTAAAAGGAT+AGG + chr2.3:61813695-61813714 None:intergenic 35.0%
ATTATCAATCGTGATCATCC+GGG + chr2.3:61811498-61811517 None:intergenic 35.0%
CATTTAATCACTTAGCTAGC+TGG - chr2.3:61813357-61813376 MS.gene048286:CDS 35.0%
CTAACCATTTGAAAACTGGA+AGG + chr2.3:61812262-61812281 None:intergenic 35.0%
GCGACATAAATTTCAATGAG+AGG + chr2.3:61812317-61812336 None:intergenic 35.0%
GCTAAGAATGATCTTCCTTA+GGG - chr2.3:61812913-61812932 MS.gene048286:intron 35.0%
GGAATAAAAGTAGGATATGG+TGG - chr2.3:61814019-61814038 MS.gene048286:intron 35.0%
GTGATCATCATTTCAATCCA+GGG - chr2.3:61811685-61811704 MS.gene048286:intron 35.0%
TAATCTTCTCAAGTGGTCAT+GGG - chr2.3:61812157-61812176 MS.gene048286:CDS 35.0%
TCACAAGGTCATATTACAGA+GGG - chr2.3:61812623-61812642 MS.gene048286:intron 35.0%
TCACCCTCAAGATTTCTATT+TGG - chr2.3:61811718-61811737 MS.gene048286:intron 35.0%
TCCCATATTTGCAACTTGAT+TGG + chr2.3:61811524-61811543 None:intergenic 35.0%
TGACTGACCAATAATTGTTC+CGG + chr2.3:61811075-61811094 None:intergenic 35.0%
TGTGATCATCATTTCAATCC+AGG - chr2.3:61811684-61811703 MS.gene048286:intron 35.0%
TTCATATGCTTGCAGTCTTA+TGG - chr2.3:61813998-61814017 MS.gene048286:intron 35.0%
! AGCCAATCAAGTTGCAAATA+TGG - chr2.3:61811519-61811538 MS.gene048286:intron 35.0%
! ATCTAATAGATGGGAGTGTA+GGG - chr2.3:61812199-61812218 MS.gene048286:intron 35.0%
! CGATGATGATGTATTTGAAG+AGG + chr2.3:61810709-61810728 None:intergenic 35.0%
! CGTTTCTAGGAATTGGTAAT+TGG - chr2.3:61811660-61811679 MS.gene048286:intron 35.0%
! CTATATTTGGTAGTAGGCTT+AGG - chr2.3:61811822-61811841 MS.gene048286:intron 35.0%
! CTCTCTTTTCTTCCAAACTT+TGG + chr2.3:61812870-61812889 None:intergenic 35.0%
! CTGCTGTTTGTCATATTTGT+AGG - chr2.3:61811852-61811871 MS.gene048286:intron 35.0%
! GCCAATCAAGTTGCAAATAT+GGG - chr2.3:61811520-61811539 MS.gene048286:intron 35.0%
! TATCTAATAGATGGGAGTGT+AGG - chr2.3:61812198-61812217 MS.gene048286:intron 35.0%
! TGAACATTGAACAAGTTGGA+AGG + chr2.3:61811594-61811613 None:intergenic 35.0%
! TGATTCTCGTTTCTAGGAAT+TGG - chr2.3:61811653-61811672 MS.gene048286:intron 35.0%
!! AAAACTGGAAGGTACCTTAA+GGG + chr2.3:61812251-61812270 None:intergenic 35.0%
!! ATAAAATCTGGCTTTCCTTG+TGG + chr2.3:61813611-61813630 None:intergenic 35.0%
!! TAAAATCTGGCTTTCCTTGT+GGG + chr2.3:61813610-61813629 None:intergenic 35.0%
!! TGGCTTTGTAGATGTAAGAT+AGG - chr2.3:61812125-61812144 MS.gene048286:CDS 35.0%
AACAGTTTGCAAAGGAGAAC+GGG - chr2.3:61813483-61813502 MS.gene048286:intron 40.0%
AACTGCTCAGAATGTTGAAG+AGG - chr2.3:61813532-61813551 MS.gene048286:intron 40.0%
AAGAAGCAATACATTGTGGG+GGG - chr2.3:61812755-61812774 MS.gene048286:intron 40.0%
AATCTTCTCAAGTGGTCATG+GGG - chr2.3:61812158-61812177 MS.gene048286:CDS 40.0%
ACCCTGTGTTTATGAATAGG+AGG - chr2.3:61813330-61813349 MS.gene048286:CDS 40.0%
AGAAGGTGAACAGTTTGCAA+AGG - chr2.3:61813475-61813494 MS.gene048286:intron 40.0%
ATGAATAGTGCGATGGAGTT+AGG + chr2.3:61811116-61811135 None:intergenic 40.0%
ATGTTTCCACCACTGAAATC+TGG + chr2.3:61812509-61812528 None:intergenic 40.0%
ATTCTATGCTGAAAAGGGAC+TGG + chr2.3:61812480-61812499 None:intergenic 40.0%
CACAAGGTCATATTACAGAG+GGG - chr2.3:61812624-61812643 MS.gene048286:intron 40.0%
CAGGCATTCATAAAAACAGC+TGG - chr2.3:61813704-61813723 MS.gene048286:intron 40.0%
CCCTCCTATTCATAAACACA+GGG + chr2.3:61813334-61813353 None:intergenic 40.0%
CCCTGTGTTTATGAATAGGA+GGG - chr2.3:61813331-61813350 MS.gene048286:CDS 40.0%
CTAATCTTCTCAAGTGGTCA+TGG - chr2.3:61812156-61812175 MS.gene048286:CDS 40.0%
CTATTCATAAACACAGGGTC+AGG + chr2.3:61813329-61813348 None:intergenic 40.0%
CTCAAAACATGTATCTCCCA+AGG + chr2.3:61813188-61813207 None:intergenic 40.0%
CTGACCCTGTGTTTATGAAT+AGG - chr2.3:61813327-61813346 MS.gene048286:CDS 40.0%
GAACAGTTTGCAAAGGAGAA+CGG - chr2.3:61813482-61813501 MS.gene048286:intron 40.0%
GAATGATCTTCCTTAGGGTT+AGG - chr2.3:61812918-61812937 MS.gene048286:intron 40.0%
GATTATCCAGATTTCAGTGG+TGG - chr2.3:61812500-61812519 MS.gene048286:intron 40.0%
TAATCACTTAGCTAGCTGGT+TGG - chr2.3:61813361-61813380 MS.gene048286:CDS 40.0%
TCACTGACCGGAACAATTAT+TGG - chr2.3:61811065-61811084 MS.gene048286:CDS 40.0%
TCCCTCCTATTCATAAACAC+AGG + chr2.3:61813335-61813354 None:intergenic 40.0%
TCTGTGTATGTTTCAAGGGA+AGG - chr2.3:61813885-61813904 MS.gene048286:intron 40.0%
TGACCTTGTGATAGATCTGA+AGG + chr2.3:61812614-61812633 None:intergenic 40.0%
! ATAGAAAAGTGTAGCTCCTC+TGG - chr2.3:61813920-61813939 MS.gene048286:intron 40.0%
! GGTACCTTCCAGTTTTCAAA+TGG - chr2.3:61812255-61812274 MS.gene048286:intron 40.0%
! TGCGATATGGGATTTGGTAA+TGG - chr2.3:61812222-61812241 MS.gene048286:intron 40.0%
!! GAAAACTGGAAGGTACCTTA+AGG + chr2.3:61812252-61812271 None:intergenic 40.0%
!! TGTGGGACAATTTTGATGCA+TGG - chr2.3:61813237-61813256 MS.gene048286:intron 40.0%
!! TTGACCATCGGTGTTGAATT+TGG - chr2.3:61811470-61811489 MS.gene048286:intron 40.0%
!! TTTGGTAATGGTGACCCTTA+AGG - chr2.3:61812234-61812253 MS.gene048286:intron 40.0%
ACCGATGGTCAAGTCATGAA+CGG + chr2.3:61811462-61811481 None:intergenic 45.0%
AGGTGTAGTTCCTAACCCTA+AGG + chr2.3:61812931-61812950 None:intergenic 45.0%
AGTCAAAGCTTGAGGATACC+TGG + chr2.3:61812680-61812699 None:intergenic 45.0%
AGTGTGATCTTGCTCACAGA+CGG - chr2.3:61813438-61813457 MS.gene048286:intron 45.0%
GGGGGATGATGAAAATCACT+GGG - chr2.3:61812773-61812792 MS.gene048286:intron 45.0%
TACATCATCATCGGCGATAC+TGG - chr2.3:61810716-61810735 MS.gene048286:CDS 45.0%
TAGTGGCAATTCATGCCAGA+GGG - chr2.3:61811348-61811367 MS.gene048286:CDS 45.0%
TCACTGGGACAAGTCATGAA+TGG - chr2.3:61812788-61812807 MS.gene048286:intron 45.0%
TTCCAGCTTCGATTTCCGAT+CGG - chr2.3:61810826-61810845 MS.gene048286:intron 45.0%
! ATTCTGAGCAGTTTTTGCCG+AGG + chr2.3:61813525-61813544 None:intergenic 45.0%
! GTAGGATATGGTGGAATTCC+TGG - chr2.3:61814028-61814047 MS.gene048286:intron 45.0%
AAGTGGTCATGGGGTATGGA+TGG - chr2.3:61812167-61812186 MS.gene048286:CDS 50.0%
AGAGAGACACCATCGTCTGA+TGG - chr2.3:61812884-61812903 MS.gene048286:intron 50.0%
AGCTAAGTGCCATCAGACGA+TGG + chr2.3:61812896-61812915 None:intergenic 50.0%
AGGGTGAAACTAAAAGGCCC+TGG + chr2.3:61811705-61811724 None:intergenic 50.0%
ATCCGATCGGAAATCGAAGC+TGG + chr2.3:61810831-61810850 None:intergenic 50.0%
CCACTTCACAGTCCATCTCA+AGG - chr2.3:61812955-61812974 MS.gene048286:intron 50.0%
CCCGTTCATGACTTGACCAT+CGG - chr2.3:61811458-61811477 MS.gene048286:intron 50.0%
CCGATGGTCAAGTCATGAAC+GGG + chr2.3:61811461-61811480 None:intergenic 50.0%
CTAGCTGGTTGGAAGATGCA+AGG - chr2.3:61813372-61813391 MS.gene048286:intron 50.0%
GGCACCAAATTCAACACCGA+TGG + chr2.3:61811477-61811496 None:intergenic 50.0%
GGGGGGATGATGAAAATCAC+TGG - chr2.3:61812772-61812791 MS.gene048286:intron 50.0%
GGTCATAAAACCAAGCCCTC+TGG + chr2.3:61811366-61811385 None:intergenic 50.0%
GTAGGGTGCGATATGGGATT+TGG - chr2.3:61812216-61812235 MS.gene048286:intron 50.0%
GTAGTGGCAATTCATGCCAG+AGG - chr2.3:61811347-61811366 MS.gene048286:CDS 50.0%
GTGTGATCTTGCTCACAGAC+GGG - chr2.3:61813439-61813458 MS.gene048286:intron 50.0%
GTTGATCTTCATGGAGGCCT+CGG - chr2.3:61813505-61813524 MS.gene048286:intron 50.0%
TCATATTACAGAGGGGCTGC+AGG - chr2.3:61812631-61812650 MS.gene048286:intron 50.0%
TCTCAAGTGGTCATGGGGTA+TGG - chr2.3:61812163-61812182 MS.gene048286:CDS 50.0%
TTCCGGTCAGTGATCGAACT+CGG + chr2.3:61811058-61811077 None:intergenic 50.0%
!! AACGGGTTGAAAGCGCTTGT+CGG + chr2.3:61811444-61811463 None:intergenic 50.0%
!! AATCTGGCTTTCCTTGTGGG+AGG + chr2.3:61813607-61813626 None:intergenic 50.0%
!! ATCTGGCTTTCCTTGTGGGA+GGG + chr2.3:61813606-61813625 None:intergenic 50.0%
!! CCTTGAGATGGACTGTGAAG+TGG + chr2.3:61812958-61812977 None:intergenic 50.0%
!! GAACGGGTTGATCTTCATGG+AGG - chr2.3:61813499-61813518 MS.gene048286:intron 50.0%
!! GGAGAACGGGTTGATCTTCA+TGG - chr2.3:61813496-61813515 MS.gene048286:intron 50.0%
!! TCGGTGTTGAATTTGGTGCC+CGG - chr2.3:61811477-61811496 MS.gene048286:intron 50.0%
!! TGAGATGGACTGTGAAGTGG+CGG + chr2.3:61812955-61812974 None:intergenic 50.0%
ACCCGAGTTCGATCACTGAC+CGG - chr2.3:61811053-61811072 MS.gene048286:CDS 55.0%
CGGGCTGTAAGCACAGAAGA+AGG - chr2.3:61813458-61813477 MS.gene048286:intron 55.0%
GCAATTCATGCCAGAGGGCT+TGG - chr2.3:61811353-61811372 MS.gene048286:CDS 55.0%
GGAATTCCTGGACCATCTGG+AGG - chr2.3:61814040-61814059 MS.gene048286:intron 55.0%
GGTGGAATTCCTGGACCATC+TGG - chr2.3:61814037-61814056 MS.gene048286:intron 55.0%
GTGCGATGGAGTTAGGCAAG+AGG + chr2.3:61811109-61811128 None:intergenic 55.0%
TAGGGATGGACCTTCTGCTG+CGG - chr2.3:61814063-61814082 MS.gene048286:CDS 55.0%
TCCGGTCAGTGATCGAACTC+GGG + chr2.3:61811057-61811076 None:intergenic 55.0%
TCCTGGACCATCTGGAGGTA+GGG - chr2.3:61814045-61814064 MS.gene048286:intron 55.0%
TTCCTGGACCATCTGGAGGT+AGG - chr2.3:61814044-61814063 MS.gene048286:intron 55.0%
TTCCTTGTGGGAGGGTGGAT+GGG + chr2.3:61813598-61813617 None:intergenic 55.0%
TTTCCTTGTGGGAGGGTGGA+TGG + chr2.3:61813599-61813618 None:intergenic 55.0%
! GGGAGTGTAGGGTGCGATAT+GGG - chr2.3:61812210-61812229 MS.gene048286:intron 55.0%
! TGGGAGTGTAGGGTGCGATA+TGG - chr2.3:61812209-61812228 MS.gene048286:intron 55.0%
AGGGATGGACCTTCTGCTGC+GGG - chr2.3:61814064-61814083 MS.gene048286:CDS 60.0%
GGACCATCTGGAGGTAGGGA+TGG - chr2.3:61814049-61814068 MS.gene048286:intron 60.0%
GGTCCATCCCTACCTCCAGA+TGG + chr2.3:61814055-61814074 None:intergenic 60.0%
TCCCTACCTCCAGATGGTCC+AGG + chr2.3:61814049-61814068 None:intergenic 60.0%
TGGCTTTCCTTGTGGGAGGG+TGG + chr2.3:61813603-61813622 None:intergenic 60.0%
TTCCCATCCACCCTCCCACA+AGG - chr2.3:61813593-61813612 MS.gene048286:intron 60.0%
! ATGGACTGTGAAGTGGCGGC+AGG + chr2.3:61812951-61812970 None:intergenic 60.0%
GATGGACCTTCTGCTGCGGG+TGG - chr2.3:61814067-61814086 MS.gene048286:CDS 65.0%
CAGCCTCCACCCGCAGCAGA+AGG + chr2.3:61814076-61814095 None:intergenic 70.0%
GGACCTTCTGCTGCGGGTGG+AGG - chr2.3:61814070-61814089 MS.gene048286:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 61810692 61814105 61810692 ID=MS.gene048286
chr2.3 mRNA 61810692 61814105 61810692 ID=MS.gene048286.t1;Parent=MS.gene048286
chr2.3 exon 61814060 61814105 61814060 ID=MS.gene048286.t1.exon1;Parent=MS.gene048286.t1
chr2.3 CDS 61814060 61814105 61814060 ID=cds.MS.gene048286.t1;Parent=MS.gene048286.t1
chr2.3 exon 61813250 61813389 61813250 ID=MS.gene048286.t1.exon2;Parent=MS.gene048286.t1
chr2.3 CDS 61813250 61813389 61813250 ID=cds.MS.gene048286.t1;Parent=MS.gene048286.t1
chr2.3 exon 61812117 61812199 61812117 ID=MS.gene048286.t1.exon3;Parent=MS.gene048286.t1
chr2.3 CDS 61812117 61812199 61812117 ID=cds.MS.gene048286.t1;Parent=MS.gene048286.t1
chr2.3 exon 61811244 61811448 61811244 ID=MS.gene048286.t1.exon4;Parent=MS.gene048286.t1
chr2.3 CDS 61811244 61811448 61811244 ID=cds.MS.gene048286.t1;Parent=MS.gene048286.t1
chr2.3 exon 61811022 61811090 61811022 ID=MS.gene048286.t1.exon5;Parent=MS.gene048286.t1
chr2.3 CDS 61811022 61811090 61811022 ID=cds.MS.gene048286.t1;Parent=MS.gene048286.t1
chr2.3 exon 61810692 61810784 61810692 ID=MS.gene048286.t1.exon6;Parent=MS.gene048286.t1
chr2.3 CDS 61810692 61810784 61810692 ID=cds.MS.gene048286.t1;Parent=MS.gene048286.t1
Gene Sequence

>MS.gene048286

ATGTCTTACGCATACCTCTTCAAATACATCATCATCGGCGATACTGGTAATTATAATCTCAATTAACCCCTTTCTAATCTCTTTTTATTTATCTTAATTAATCTCAATTTATTCTATTCTCTTAATCATGCGTCTTCCAGCTTCGATTTCCGATCGGATTTATTCATTTTTCTTTTCAGGGTTTTTGTTTTGTTTGAGAATTATTTTATATACATGTATAATATGATGATGATGATTATTATTTGATGTTGATTCTCTTGTGTTATTTTAACAAGCTAACAAAATTTTGATTATTACTAAATATTCATAAGTATTTAGTAGTAGTTAATGAGGTTTAATTAATGAAGAATCGATCAGAAGCACCCGAGTTCGATCACTGACCGGAACAATTATTGGTCAGTCAGACTTTAGTTACCTCTTGCCTAACTCCATCGCACTATTCATTATTTTTATGTAGTTTAGGGAAATTGGAGTTAAAGTGATAGTTTATTTTATGGACTAAATGGATGGTTTATTCAATTTTGTTATTGTGATGGATCCTTTATTGTTAGTTTTGTTTCATTAACTAAGAATGAAAACTGTTGAGTGTGTTATATATAGTTTGATCCTTATTTCGTTTAGTTTGTATTTTGTTAATTATGTAGTTTAAGTTTTGGTAGTGGCAATTCATGCCAGAGGGCTTGGTTTTATGACCTTATTTTGAAAAAATTGTGTAGGAGTTGGGAAGTCATGTCTTCTACTTCAGTTCACCGACAAGCGCTTTCAACCCGTTCATGACTTGACCATCGGTGTTGAATTTGGTGCCCGGATGATCACGATTGATAATAAGCCAATCAAGTTGCAAATATGGGATACCGTATGTTTGTCAACTCTTTCATAGAACTTGTTTATTACTTACTCCTTCCAACTTGTTCAATGTTCATACTTAATTACTAATTTACAAATCTGTGAAAATTATTGTTGATTCTCGTTTCTAGGAATTGGTAATTGGTTGTGATCATCATTTCAATCCAGGGCCTTTTAGTTTCACCCTCAAGATTTCTATTTGGTTGAAAATGATATTTCATATTATTATCATTTTATGTTGATTCATTGGCTGATTTTCATATGAAGAGCTATGCAGATAGGAACTATATTTGGTAGTAGGCTTAGGGTTGATGCTGCTGTTTGTCATATTTGTAGGCTGTCGCTATAATTTTAACATCCATGCCATTTTGTTTCAAAGAATACTCTGCTAAGTGTAATAATAACATGCCTTGTTATTTTGAAATTTTGTATCTATAACTCTCTTTATAATGTTAAAAAATCATCACTGTTCCACTTAATATATAATCCATTTACATTTACATTGTTGAGAATGAGAACCTAACTATATGGGGATGAAAGTATTTGAATTTATCTGTAAAAGTTACTATATACATGAAATAAATTTATGGCTTTGTAGATGTAAGATAGGTTTCTAAACTAATCTTCTCAAGTGGTCATGGGGTATGGATGGAAAGATTTTATCTAATAGATGGGAGTGTAGGGTGCGATATGGGATTTGGTAATGGTGACCCTTAAGGTACCTTCCAGTTTTCAAATGGTTAGTTTTACAAGATTGACTACAGAAATAAATAGGTCCTCTCATTGAAATTTATGTCGCCTTGTTATTTTGAAATTTTGTATCTATAACTCTCTTTATAATGTTAAAAAAATTTCAGTTTTCCACTTAATATATAAACAGAGATATAAAAACAAAATTTGACCCAGATGAGGTTCTGTGAAATTTCAACATGAGATAATCCAGTCCCTTTTCAGCATAGAATGATTATCCAGATTTCAGTGGTGGAAACATTATTCATTTGTTGGTTGAGTTTAATAAATTGTGAAGCTGAAGGTACTGAACTTATTCACTATATTTCAGGCGGGTCAAGAATCCTTCAGATCTATCACAAGGTCATATTACAGAGGGGCTGCAGGTGCACTGCTTGTTTATGATATAACCAGGTATCCTCAAGCTTTGACTTCTATTATCTGAGTTTGAAATCCCAAAATACAATAATTATTTTCACTTAAAATTAAAGAAGCAATACATTGTGGGGGGATGATGAAAATCACTGGGACAAGTCATGAATGGAGTCGCTCGTATTAGACTATAAGTTACTCGGTTCGATTGTCTCTTAAATAATCTCACCAAAGTTTGGAAGAAAAGAGAGACACCATCGTCTGATGGCACTTAGCTAAGAATGATCTTCCTTAGGGTTAGGAACTACACCTGCCGCCACTTCACAGTCCATCTCAAGGATTACATGAAATATTAATGTTATATCTTCCAGTTGCTTGAAATATGATTTGCAAATCATTTTGGTCTGTTTATAACTGTTTAAATACAATTTCATAACTTGGGCTAAATAGCTTTTAGATTTTTTCTAAGGAAGATATGACGAGTTTGTCCAACAAAAATCAATTTATTGAAAAACATTGATAACACGCATTTTGAGTTTTTATATGCCTTGGGAGATACATGTTTTGAGTGCATCCAATTTAATGGAACAACATACTATGTGGGACAATTTTGATGCATGGATGCCTATGTAGTTTCATGTTAGTTTTATGTGTTGTTTAATGTAAATAAGGCACAATATAAACAATCCTGACCCTGTGTTTATGAATAGGAGGGAGACATTTAATCACTTAGCTAGCTGGTTGGAAGATGCAAGGCAGCATGCAAATGCAAATATGACAATTATGCTGATTGGCAACAAGTGTGATCTTGCTCACAGACGGGCTGTAAGCACAGAAGAAGGTGAACAGTTTGCAAAGGAGAACGGGTTGATCTTCATGGAGGCCTCGGCAAAAACTGCTCAGAATGTTGAAGAGGTCAGAACTCACATCCTATCTATTGTTTTCTTCATTTATTTCCCATCCACCCTCCCACAAGGAAAGCCAGATTTTATACATAACAGGTTCTTAGGTTGAATATTTTGGAAAATTATCTGTATAAAAGTTTTAATATAACCTATCCTTTTACAGGCATTCATAAAAACAGCTGGAACCATATACAAAAAGATTCAGGATGGAGTTTTTGATGTATCGAATGAGGTTAGTTTCTTTTTTCATTTTTTTAGATTTGTAATTCTTTACCTCGGGTGTTTTGTTAAGAATTTGTGGGATATTCAATTTCACTGTGTCCTTTATTTTTGTAATACAATCTGTGTATGTTTCAAGGGAAGGCTAATGATTATTATAGAAAAGTGTAGCTCCTCTGGAGTTGATGATTATTATTAGGCTAATGATTATTCAACAAACAAGTCACTGATAATTTTCATATGCTTGCAGTCTTATGGAATAAAAGTAGGATATGGTGGAATTCCTGGACCATCTGGAGGTAGGGATGGACCTTCTGCTGCGGGTGGAGGCTGCTGCAGTTGA
Protein sequence

>MS.gene048286.t1

MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS