Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90212.t1 | XP_003608428.1 | 99.1 | 445 | 4 | 0 | 1 | 445 | 1 | 445 | 8.60E-258 | 899 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90212.t1 | Q9LXC0 | 84.7 | 444 | 68 | 0 | 1 | 444 | 1 | 444 | 1.5e-223 | 776.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90212.t1 | G7JCQ0 | 99.1 | 445 | 4 | 0 | 1 | 445 | 1 | 445 | 6.2e-258 | 899.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053571 | MS.gene90212 | 0.961128 | 2.41E-119 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90212 | MS.gene017310 | PPI |
| MS.gene90212 | MS.gene33386 | PPI |
| MS.gene90212 | MS.gene09683 | PPI |
| MS.gene90212 | MS.gene01969 | PPI |
| MS.gene90212 | MS.gene34075 | PPI |
| MS.gene90212 | MS.gene02877 | PPI |
| MS.gene90212 | MS.gene005920 | PPI |
| MS.gene90212 | MS.gene008351 | PPI |
| MS.gene033585 | MS.gene90212 | PPI |
| MS.gene90212 | MS.gene068257 | PPI |
| MS.gene90212 | MS.gene21497 | PPI |
| MS.gene54215 | MS.gene90212 | PPI |
| MS.gene90212 | MS.gene024151 | PPI |
| MS.gene90212 | MS.gene049680 | PPI |
| MS.gene037879 | MS.gene90212 | PPI |
| MS.gene048286 | MS.gene90212 | PPI |
| MS.gene90212 | MS.gene061580 | PPI |
| MS.gene90212 | MS.gene55072 | PPI |
| MS.gene055394 | MS.gene90212 | PPI |
| MS.gene90212 | MS.gene003158 | PPI |
| MS.gene05029 | MS.gene90212 | PPI |
| MS.gene90212 | MS.gene26196 | PPI |
| MS.gene90212 | MS.gene063577 | PPI |
| MS.gene90212 | MS.gene99137 | PPI |
| MS.gene90212 | MS.gene065419 | PPI |
| MS.gene90212 | MS.gene24932 | PPI |
| MS.gene90212 | MS.gene009580 | PPI |
| MS.gene90212 | MS.gene015341 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90212.t1 | MTR_4g093980 | 99.101 | 445 | 4 | 0 | 1 | 445 | 1 | 445 | 0.0 | 907 |
| MS.gene90212.t1 | MTR_8g088620 | 80.856 | 444 | 85 | 0 | 1 | 444 | 1 | 444 | 0.0 | 759 |
| MS.gene90212.t1 | MTR_5g024150 | 26.972 | 393 | 211 | 13 | 5 | 327 | 18 | 404 | 6.79e-27 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90212.t1 | AT5G09550 | 84.685 | 444 | 68 | 0 | 1 | 444 | 1 | 444 | 0.0 | 785 |
| MS.gene90212.t1 | AT2G44100 | 78.202 | 445 | 97 | 0 | 1 | 445 | 1 | 445 | 0.0 | 739 |
| MS.gene90212.t1 | AT3G59920 | 77.703 | 444 | 99 | 0 | 1 | 444 | 1 | 444 | 0.0 | 739 |
| MS.gene90212.t1 | AT2G44100 | 77.674 | 430 | 96 | 0 | 1 | 430 | 1 | 430 | 0.0 | 715 |
| MS.gene90212.t1 | AT3G06540 | 25.225 | 444 | 235 | 14 | 5 | 361 | 15 | 448 | 8.26e-23 | 101 |
Find 106 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGCTATTTAAGCGATTT+AGG | 0.117749 | 4.2:-19808799 | MS.gene90212:intron |
| GATGATACAGTTGACTTTAT+TGG | 0.182516 | 4.2:-19807578 | MS.gene90212:CDS |
| GGCACTGAAGTCACCTTTAA+TGG | 0.213355 | 4.2:-19808118 | MS.gene90212:CDS |
| TTGTCCAAATGCAGCAAATA+TGG | 0.234329 | 4.2:-19807608 | MS.gene90212:intron |
| CACAAACTTACCTTGCATTC+TGG | 0.280608 | 4.2:+19806587 | None:intergenic |
| TTCTCAAACAGACCCATTAA+AGG | 0.296833 | 4.2:+19808105 | None:intergenic |
| AGTGGTCTTCTCTCTGTTGA+TGG | 0.304892 | 4.2:-19809583 | MS.gene90212:CDS |
| TGACAAGCTACCAGAGGAAT+TGG | 0.318365 | 4.2:-19808771 | MS.gene90212:CDS |
| ATAGCTATTTAAGCGATTTA+GGG | 0.336658 | 4.2:-19808798 | MS.gene90212:intron |
| GATCATTAGCTTCATAATCT+TGG | 0.340169 | 4.2:+19808052 | None:intergenic |
| CCTTACATATATCCACTATA+TGG | 0.373214 | 4.2:-19806755 | MS.gene90212:CDS |
| ATGGATCAAAATGACTACTA+TGG | 0.385668 | 4.2:-19808953 | MS.gene90212:CDS |
| TCATCTTGATGACAGTTACT+TGG | 0.390099 | 4.2:-19807540 | MS.gene90212:CDS |
| TATGATGGCCAATGGAGCTT+TGG | 0.414944 | 4.2:-19808380 | MS.gene90212:CDS |
| AGTGCCTCAACATCTGTTGC+TGG | 0.426848 | 4.2:+19808135 | None:intergenic |
| GAGTCGTTAGTGTCTGGAAT+AGG | 0.427675 | 4.2:+19806089 | None:intergenic |
| TGTTTGAGAAGCGCCGGGCT+CGG | 0.429684 | 4.2:-19808092 | MS.gene90212:CDS |
| TCATGTCAACATTGTATTCT+CGG | 0.431332 | 4.2:+19808741 | None:intergenic |
| TCTAGCAGATATACCTTGTC+AGG | 0.432373 | 4.2:+19806291 | None:intergenic |
| ATCAAGTCCTTCGTGAGACT+TGG | 0.434472 | 4.2:+19808029 | None:intergenic |
| CTGAACTTTAAAGCTGTAGA+TGG | 0.445888 | 4.2:-19808322 | MS.gene90212:CDS |
| GAGCATAAGAGCAGCAGAAA+AGG | 0.457022 | 4.2:+19805923 | None:intergenic |
| GCACTGAAGTCACCTTTAAT+GGG | 0.461818 | 4.2:-19808117 | MS.gene90212:CDS |
| GGTCCAAGGAGATCGATTCC+AGG | 0.462358 | 4.2:+19805820 | None:intergenic |
| CTCAAGGAATGCATCCTTAG+TGG | 0.471649 | 4.2:-19809601 | MS.gene90212:CDS |
| GTGGTTTCAAAGTGTGTTGT+GGG | 0.472100 | 4.2:+19805607 | None:intergenic |
| GAGTGAGAGTCGTTAGTGTC+TGG | 0.477098 | 4.2:+19806083 | None:intergenic |
| TGGGTCTGTTTGAGAAGCGC+CGG | 0.477888 | 4.2:-19808098 | MS.gene90212:CDS |
| TCAGCTGTCTTGCTGTAACT+TGG | 0.480690 | 4.2:+19808001 | None:intergenic |
| CGGCTAGAGCCCAATTCCTC+TGG | 0.480916 | 4.2:+19808761 | None:intergenic |
| ACCTTGTCAGGCAGATATGA+TGG | 0.484809 | 4.2:+19806303 | None:intergenic |
| GATGTAATTGTCCTCGGCAC+TGG | 0.486932 | 4.2:-19809625 | MS.gene90212:CDS |
| CAAATGCAGCAAATATGGAT+TGG | 0.489275 | 4.2:-19807603 | MS.gene90212:intron |
| CCTCAGGTGGAATTGAAGCC+TGG | 0.489518 | 4.2:-19805838 | MS.gene90212:CDS |
| AGCTGAGACTGACCAACCTC+AGG | 0.491525 | 4.2:-19805854 | MS.gene90212:CDS |
| CATATATCCACTATATGGAC+TGG | 0.492691 | 4.2:-19806750 | MS.gene90212:CDS |
| GCTCGGTTGAGTGCTGTGTA+TGG | 0.493867 | 4.2:-19806632 | MS.gene90212:CDS |
| TAGGTAGAGTTTGACGCTGA+TGG | 0.507482 | 4.2:-19806387 | MS.gene90212:CDS |
| AAATGAAGAACTTCCGAGCC+CGG | 0.511161 | 4.2:+19808079 | None:intergenic |
| TGGTAGTTTATGATGGCCAA+TGG | 0.511335 | 4.2:-19808388 | MS.gene90212:intron |
| GACAAGCTACCAGAGGAATT+GGG | 0.512626 | 4.2:-19808770 | MS.gene90212:CDS |
| ACCATCAGTAGCATGATCAT+TGG | 0.514853 | 4.2:+19805753 | None:intergenic |
| AAGCCTGGAATCGATCTCCT+TGG | 0.519075 | 4.2:-19805823 | MS.gene90212:CDS |
| GCCATCGGTGTGACTTCAGA+TGG | 0.519822 | 4.2:-19806360 | MS.gene90212:CDS |
| CTGTCCACAAAATCCTTAGC+TGG | 0.520365 | 4.2:+19807512 | None:intergenic |
| CTGCAGCACTTGCAGCACTC+AGG | 0.521016 | 4.2:+19805354 | None:intergenic |
| CCATATAGTGGATATATGTA+AGG | 0.525515 | 4.2:+19806755 | None:intergenic |
| AACTCTCCCAGTCCATATAG+TGG | 0.528131 | 4.2:+19806743 | None:intergenic |
| CACACGAACCAAAGCTCCAT+TGG | 0.528527 | 4.2:+19808372 | None:intergenic |
| AGGTAGAGTTTGACGCTGAT+GGG | 0.530777 | 4.2:-19806386 | MS.gene90212:CDS |
| TGTGGTTTCAAAGTGTGTTG+TGG | 0.530952 | 4.2:+19805606 | None:intergenic |
| ATCAAAATGACTACTATGGA+GGG | 0.531635 | 4.2:-19808949 | MS.gene90212:CDS |
| ATCAGTAGCATGATCATTGG+TGG | 0.535403 | 4.2:+19805756 | None:intergenic |
| CCAGGCTTCAATTCCACCTG+AGG | 0.541595 | 4.2:+19805838 | None:intergenic |
| TGTCCTCGGCACTGGCCTCA+AGG | 0.549809 | 4.2:-19809617 | MS.gene90212:CDS |
| ATTCTGCCACAGAAGCAACT+TGG | 0.552217 | 4.2:-19806050 | MS.gene90212:CDS |
| TCAAGTCCTTCGTGAGACTT+GGG | 0.552859 | 4.2:+19808030 | None:intergenic |
| ATCCAACAGGTTCAAAACGT+TGG | 0.556173 | 4.2:-19806146 | MS.gene90212:intron |
| ATTACTGGAAGGCATTTGCT+CGG | 0.557422 | 4.2:-19806649 | MS.gene90212:intron |
| TTGGTCAGTCTCAGCTTCTG+TGG | 0.560618 | 4.2:+19805861 | None:intergenic |
| TTACGACCAAGTTGCTTCTG+TGG | 0.561237 | 4.2:+19806044 | None:intergenic |
| CAGATGTACAGTAAGATCAC+TGG | 0.563791 | 4.2:-19805568 | MS.gene90212:CDS |
| GCTTCAATTCCACCTGAGGT+TGG | 0.567079 | 4.2:+19805842 | None:intergenic |
| TTACTTGGATAAGCCAGCTA+AGG | 0.567941 | 4.2:-19807525 | MS.gene90212:CDS |
| GAGTATGATGTAATTGTCCT+CGG | 0.574662 | 4.2:-19809631 | MS.gene90212:CDS |
| TCCATCTGAAGTCACACCGA+TGG | 0.574997 | 4.2:+19806359 | None:intergenic |
| GACGCTGATGGGAAAGCCAT+CGG | 0.579371 | 4.2:-19806375 | MS.gene90212:CDS |
| TGGACTGGGAGAGTTGCCTC+AGG | 0.580060 | 4.2:-19806735 | MS.gene90212:intron |
| GGGTCTGTTTGAGAAGCGCC+GGG | 0.581340 | 4.2:-19808097 | MS.gene90212:CDS |
| GTTCAGATACTTTGTAACAT+CGG | 0.582634 | 4.2:+19808339 | None:intergenic |
| TGGAAGCTTTGTGTATAACA+AGG | 0.583286 | 4.2:-19808302 | MS.gene90212:CDS |
| GCTGAATAAACCAGAATGCA+AGG | 0.583808 | 4.2:-19806597 | MS.gene90212:intron |
| TCATAGAAGATCTCATCGAC+TGG | 0.589050 | 4.2:+19805799 | None:intergenic |
| AGACACTAACGACTCTCACT+CGG | 0.589228 | 4.2:-19806081 | MS.gene90212:CDS |
| TACATCATACTCTTCATCCA+TGG | 0.591911 | 4.2:+19809642 | None:intergenic |
| GTCATCAAGATGAAGTGCTA+AGG | 0.592615 | 4.2:+19807550 | None:intergenic |
| GGTAAATCAGGTGTTGCACA+TGG | 0.593570 | 4.2:-19808972 | MS.gene90212:intron |
| GATCAAAATGACTACTATGG+AGG | 0.599865 | 4.2:-19808950 | MS.gene90212:CDS |
| CGGTTGAGTGCTGTGTATGG+TGG | 0.604718 | 4.2:-19806629 | MS.gene90212:CDS |
| ACCAATGATCATGCTACTGA+TGG | 0.607857 | 4.2:-19805754 | MS.gene90212:CDS |
| AGATCTCATCGACTGGTCCA+AGG | 0.610382 | 4.2:+19805806 | None:intergenic |
| TCAGTAGCATGATCATTGGT+GGG | 0.611320 | 4.2:+19805757 | None:intergenic |
| TGAGACTGACCAACCTCAGG+TGG | 0.613165 | 4.2:-19805851 | MS.gene90212:CDS |
| TAGCTATTTAAGCGATTTAG+GGG | 0.616783 | 4.2:-19808797 | MS.gene90212:CDS |
| CAACAGAGAGAAGACCACTA+AGG | 0.618184 | 4.2:+19809587 | None:intergenic |
| AACCTCCTTGAAAACGTGCG+AGG | 0.621024 | 4.2:+19806780 | None:intergenic |
| CGTTAGTGTCTGGAATAGGA+TGG | 0.621499 | 4.2:+19806093 | None:intergenic |
| CTTTGTGTATAACAAGGGAA+AGG | 0.626697 | 4.2:-19808296 | MS.gene90212:intron |
| CTGTGTGAGATTAAGAGATG+TGG | 0.627691 | 4.2:+19808922 | None:intergenic |
| TCAAAATGACTACTATGGAG+GGG | 0.629297 | 4.2:-19808948 | MS.gene90212:CDS |
| TCCATCATATCTGCCTGACA+AGG | 0.629352 | 4.2:-19806304 | MS.gene90212:intron |
| GGAAGCTTTGTGTATAACAA+GGG | 0.632018 | 4.2:-19808301 | MS.gene90212:CDS |
| ACCTCCTTGAAAACGTGCGA+GGG | 0.634132 | 4.2:+19806781 | None:intergenic |
| AGTTCCAGCAACAGATGTTG+AGG | 0.634985 | 4.2:-19808139 | MS.gene90212:CDS |
| GTACAGTAAGATCACTGGAA+AGG | 0.642420 | 4.2:-19805563 | MS.gene90212:intron |
| CAATGTTGACATGATACCGA+AGG | 0.644447 | 4.2:-19808732 | MS.gene90212:intron |
| ATATATCCACTATATGGACT+GGG | 0.645856 | 4.2:-19806749 | MS.gene90212:CDS |
| ATTCCTTGAGGCCAGTGCCG+AGG | 0.649743 | 4.2:+19809614 | None:intergenic |
| GATACTTTGTAACATCGGTG+TGG | 0.650713 | 4.2:+19808344 | None:intergenic |
| CTGAACCACATCTTTCACTG+TGG | 0.652632 | 4.2:+19805588 | None:intergenic |
| TGAAACCACAGTGAAAGATG+TGG | 0.658531 | 4.2:-19805593 | MS.gene90212:CDS |
| CACATCTCTTAATCTCACAC+AGG | 0.661671 | 4.2:-19808921 | MS.gene90212:intron |
| CACTAAGGATGCATTCCTTG+AGG | 0.669251 | 4.2:+19809602 | None:intergenic |
| GCTCACAATGTAGCTCCCAA+AGG | 0.685105 | 4.2:-19805904 | MS.gene90212:CDS |
| GGGAGATGACAAGCTACCAG+AGG | 0.712709 | 4.2:-19808777 | MS.gene90212:CDS |
| AATGATCCCAAGTCTCACGA+AGG | 0.713085 | 4.2:-19808036 | MS.gene90212:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTATTTAATTAT+TGG | - | chr4.2:19808742-19808761 | MS.gene90212:CDS | 0.0% |
| !!! | TATTATCTTTTATTTTCATA+TGG | - | chr4.2:19809561-19809580 | MS.gene90212:intron | 10.0% |
| !!! | TATTTTTGTTTTATTTTTTC+AGG | - | chr4.2:19809587-19809606 | MS.gene90212:CDS | 10.0% |
| !! | AAAAAAAAACTTCAAATTGA+AGG | + | chr4.2:19805705-19805724 | None:intergenic | 15.0% |
| !! | AAATTGAAGTTAGATTTAAA+GGG | + | chr4.2:19807063-19807082 | None:intergenic | 15.0% |
| !! | AATTTCATTATATTGTTTGT+CGG | + | chr4.2:19809291-19809310 | None:intergenic | 15.0% |
| !! | ACAAAATTTAATCATGTAAT+AGG | + | chr4.2:19805964-19805983 | None:intergenic | 15.0% |
| !! | ATAAAAGATAATATTCACAA+AGG | + | chr4.2:19809554-19809573 | None:intergenic | 15.0% |
| !! | ATATATTTGTAATTGACAAT+AGG | + | chr4.2:19805879-19805898 | None:intergenic | 15.0% |
| !! | TAAAAGATAATATTCACAAA+GGG | + | chr4.2:19809553-19809572 | None:intergenic | 15.0% |
| !! | TCTCAAATTATTATTATTAC+CGG | + | chr4.2:19805606-19805625 | None:intergenic | 15.0% |
| !! | TTTAAAAGGAAATATAGATA+TGG | + | chr4.2:19808278-19808297 | None:intergenic | 15.0% |
| !!! | AATTTTCAAAGAGAAAAATA+AGG | + | chr4.2:19809319-19809338 | None:intergenic | 15.0% |
| !!! | TTTTAATTATGCTTTTTTCT+TGG | - | chr4.2:19806518-19806537 | MS.gene90212:intron | 15.0% |
| !!! | TTTTCTCAGATAAATTTATA+AGG | - | chr4.2:19808141-19808160 | MS.gene90212:CDS | 15.0% |
| !! | AAACACTTTCAAATATACTT+TGG | - | chr4.2:19809472-19809491 | MS.gene90212:intron | 20.0% |
| !! | AAATTTAATCATGTAATAGG+TGG | + | chr4.2:19805961-19805980 | None:intergenic | 20.0% |
| !! | AATGAAATAAAAATCTGATG+TGG | + | chr4.2:19807166-19807185 | None:intergenic | 20.0% |
| !! | ATCGAAACATTGATATTTAT+CGG | - | chr4.2:19806360-19806379 | MS.gene90212:CDS | 20.0% |
| !! | CAAATTGAAGTTAGATTTAA+AGG | + | chr4.2:19807064-19807083 | None:intergenic | 20.0% |
| !! | CTTTATTAAATGCATGAAAA+AGG | - | chr4.2:19807806-19807825 | MS.gene90212:intron | 20.0% |
| !! | GTATATCTTACTTTGTATTA+AGG | + | chr4.2:19807980-19807999 | None:intergenic | 20.0% |
| !! | TATATTAGTACTTATGTTTG+AGG | + | chr4.2:19807594-19807613 | None:intergenic | 20.0% |
| !! | TCAAAAGAAAGTAAAACATA+TGG | + | chr4.2:19806724-19806743 | None:intergenic | 20.0% |
| !! | TTGTAAAACAATTTCTAATG+AGG | - | chr4.2:19806449-19806468 | MS.gene90212:intron | 20.0% |
| !!! | AAAAGCAATATATTTTCCTT+TGG | + | chr4.2:19809098-19809117 | None:intergenic | 20.0% |
| !!! | AAAGCAATATATTTTCCTTT+GGG | + | chr4.2:19809097-19809116 | None:intergenic | 20.0% |
| !!! | ATTTTAGTATTCTTGTACAT+AGG | - | chr4.2:19808577-19808596 | MS.gene90212:intron | 20.0% |
| !!! | TTGAATCAAAGTATTGAATT+CGG | + | chr4.2:19807330-19807349 | None:intergenic | 20.0% |
| ! | AAAACCGTAATACTTTATTG+TGG | + | chr4.2:19807941-19807960 | None:intergenic | 25.0% |
| ! | AAGATATACACCTTTGATAA+GGG | - | chr4.2:19807991-19808010 | MS.gene90212:intron | 25.0% |
| ! | AATATGAGAAAAGTTACCTT+CGG | + | chr4.2:19806270-19806289 | None:intergenic | 25.0% |
| ! | ATAAAAGCCATATAACTTCT+AGG | + | chr4.2:19807778-19807797 | None:intergenic | 25.0% |
| ! | ATAAACTACCATAAAACAGA+TGG | + | chr4.2:19806586-19806605 | None:intergenic | 25.0% |
| ! | ATAGCTATTTAAGCGATTTA+GGG | - | chr4.2:19806185-19806204 | MS.gene90212:intron | 25.0% |
| ! | ATATTGAAAATCTGCATAAG+AGG | + | chr4.2:19806095-19806114 | None:intergenic | 25.0% |
| ! | CATAAATACAGTCCAAATTA+TGG | + | chr4.2:19806549-19806568 | None:intergenic | 25.0% |
| ! | CATAATTTGGACTGTATTTA+TGG | - | chr4.2:19806547-19806566 | MS.gene90212:intron | 25.0% |
| ! | TAAGATATACACCTTTGATA+AGG | - | chr4.2:19807990-19808009 | MS.gene90212:intron | 25.0% |
| ! | TACAAGAATACTAAAATGTG+AGG | + | chr4.2:19808574-19808593 | None:intergenic | 25.0% |
| ! | TATAGCTATTTAAGCGATTT+AGG | - | chr4.2:19806184-19806203 | MS.gene90212:intron | 25.0% |
| ! | TATATCTGCTAGATTTCTAA+GGG | - | chr4.2:19808702-19808721 | MS.gene90212:intron | 25.0% |
| ! | TATGAAAAATTCTGTAGAGA+TGG | - | chr4.2:19807612-19807631 | MS.gene90212:intron | 25.0% |
| ! | TCTAAAAAGATGACATTAGA+TGG | - | chr4.2:19805730-19805749 | MS.gene90212:intron | 25.0% |
| ! | TCTTCATAATGCTTTAATGA+TGG | + | chr4.2:19807217-19807236 | None:intergenic | 25.0% |
| ! | TGAATGAATGAATTACTTTG+AGG | + | chr4.2:19805426-19805445 | None:intergenic | 25.0% |
| ! | TGATGCTAAATTCTAATAGA+TGG | + | chr4.2:19808046-19808065 | None:intergenic | 25.0% |
| ! | TTATTATTATTACCGGTGTT+TGG | + | chr4.2:19805599-19805618 | None:intergenic | 25.0% |
| ! | TTTAAAGGGATGTAAAATCA+AGG | + | chr4.2:19807049-19807068 | None:intergenic | 25.0% |
| !! | CAATTTTATGTATGTGTGTA+TGG | - | chr4.2:19808518-19808537 | MS.gene90212:intron | 25.0% |
| !! | GAAATTTTCTGTTGATCTAA+AGG | + | chr4.2:19806299-19806318 | None:intergenic | 25.0% |
| !! | TGTTTTATGGTAGTTTATGA+TGG | - | chr4.2:19806588-19806607 | MS.gene90212:intron | 25.0% |
| !! | TTCTTGGATTTTCCATAATT+TGG | - | chr4.2:19806534-19806553 | MS.gene90212:intron | 25.0% |
| !!! | AAAAACTATGCAATTTGCTA+AGG | - | chr4.2:19806472-19806491 | MS.gene90212:intron | 25.0% |
| !!! | ACAGTTTTTAGTAAAGCTTT+TGG | + | chr4.2:19807692-19807711 | None:intergenic | 25.0% |
| !!! | AGTATAGATGTTTTGTTTCA+TGG | - | chr4.2:19806125-19806144 | MS.gene90212:CDS | 25.0% |
| AAAATAGTTCACTGAATCAC+TGG | + | chr4.2:19807259-19807278 | None:intergenic | 30.0% | |
| AATAAGCCGAAGAAAAAGAA+AGG | + | chr4.2:19807026-19807045 | None:intergenic | 30.0% | |
| AATTCGGTTAAAATAACTGC+TGG | + | chr4.2:19807314-19807333 | None:intergenic | 30.0% | |
| ACAGCTTAAAGTAATTCAAC+TGG | + | chr4.2:19808447-19808466 | None:intergenic | 30.0% | |
| ACATATGCCAAATGACTATA+TGG | + | chr4.2:19808119-19808138 | None:intergenic | 30.0% | |
| AGCTTTACTAAAAACTGTGA+AGG | - | chr4.2:19807694-19807713 | MS.gene90212:intron | 30.0% | |
| ATATAGATATGGAAAACCTG+AGG | + | chr4.2:19808267-19808286 | None:intergenic | 30.0% | |
| ATATATCCACTATATGGACT+GGG | - | chr4.2:19808234-19808253 | MS.gene90212:intron | 30.0% | |
| ATCAAAATGACTACTATGGA+GGG | - | chr4.2:19806034-19806053 | MS.gene90212:intron | 30.0% | |
| ATCAACTAACATGTAGCAAT+TGG | + | chr4.2:19805913-19805932 | None:intergenic | 30.0% | |
| ATCATGACCATATAGTCATT+TGG | - | chr4.2:19808109-19808128 | MS.gene90212:CDS | 30.0% | |
| ATGAATCGCATACACAAATT+TGG | - | chr4.2:19805552-19805571 | MS.gene90212:intron | 30.0% | |
| ATGGATCAAAATGACTACTA+TGG | - | chr4.2:19806030-19806049 | MS.gene90212:intron | 30.0% | |
| ATTCTTCTTAGTACTTACTG+TGG | + | chr4.2:19809266-19809285 | None:intergenic | 30.0% | |
| CAAAACAAGCATAATGATAG+TGG | + | chr4.2:19808087-19808106 | None:intergenic | 30.0% | |
| CAAAGATCCTAGAAGTTATA+TGG | - | chr4.2:19807768-19807787 | MS.gene90212:intron | 30.0% | |
| CACTATTTAATCAATCCAAC+AGG | - | chr4.2:19808824-19808843 | MS.gene90212:intron | 30.0% | |
| CCATAAAACAGATGGAAAAT+TGG | + | chr4.2:19806578-19806597 | None:intergenic | 30.0% | |
| CCTTACATATATCCACTATA+TGG | - | chr4.2:19808228-19808247 | MS.gene90212:intron | 30.0% | |
| GAATTACTTTAAGCTGTGTT+AGG | - | chr4.2:19808450-19808469 | MS.gene90212:intron | 30.0% | |
| GATCAAATGTAACTACATGT+TGG | - | chr4.2:19805636-19805655 | MS.gene90212:intron | 30.0% | |
| GTATATCTGCTAGATTTCTA+AGG | - | chr4.2:19808701-19808720 | MS.gene90212:intron | 30.0% | |
| GTTCAGATACTTTGTAACAT+CGG | + | chr4.2:19806647-19806666 | None:intergenic | 30.0% | |
| GTTGGATTGATTAAATAGTG+AGG | + | chr4.2:19808824-19808843 | None:intergenic | 30.0% | |
| TAGCTATTTAAGCGATTTAG+GGG | - | chr4.2:19806186-19806205 | MS.gene90212:intron | 30.0% | |
| TCAATGTTTCGATGCTTTAT+CGG | + | chr4.2:19806353-19806372 | None:intergenic | 30.0% | |
| TCATGTCAACATTGTATTCT+CGG | + | chr4.2:19806245-19806264 | None:intergenic | 30.0% | |
| TGAGGAGAAATACATAGAAA+AGG | + | chr4.2:19808556-19808575 | None:intergenic | 30.0% | |
| TTAATTCCACACAAGCTAAT+CGG | - | chr4.2:19809009-19809028 | MS.gene90212:intron | 30.0% | |
| TTTACCAAGAATTGTGTCAA+AGG | + | chr4.2:19805997-19806016 | None:intergenic | 30.0% | |
| ! | AAACAATGAAACACTAGTCT+TGG | + | chr4.2:19809524-19809543 | None:intergenic | 30.0% |
| ! | AAGGCCACAATAAAGTATTA+CGG | - | chr4.2:19807934-19807953 | MS.gene90212:intron | 30.0% |
| ! | ATACTTTATTGTGGCCTTTT+TGG | + | chr4.2:19807932-19807951 | None:intergenic | 30.0% |
| ! | CCAATTTTCCATCTGTTTTA+TGG | - | chr4.2:19806575-19806594 | MS.gene90212:intron | 30.0% |
| ! | GATCATTAGCTTCATAATCT+TGG | + | chr4.2:19806934-19806953 | None:intergenic | 30.0% |
| ! | GATGATACAGTTGACTTTAT+TGG | - | chr4.2:19807405-19807424 | MS.gene90212:intron | 30.0% |
| ! | TATGCTTTTGTAGAGTGATA+TGG | - | chr4.2:19807525-19807544 | MS.gene90212:CDS | 30.0% |
| ! | TGTATTAAGGATTTAGCTTC+TGG | + | chr4.2:19807967-19807986 | None:intergenic | 30.0% |
| !! | ACTTCGATACTTTTGATTAC+TGG | - | chr4.2:19808319-19808338 | MS.gene90212:CDS | 30.0% |
| !! | CCATATAGTGGATATATGTA+AGG | + | chr4.2:19808231-19808250 | None:intergenic | 30.0% |
| !! | CTCTGCAAGGATTTAATTTT+AGG | + | chr4.2:19809349-19809368 | None:intergenic | 30.0% |
| ACTACATGTTGGCATCATAT+CGG | - | chr4.2:19805647-19805666 | MS.gene90212:intron | 35.0% | |
| ATATAGTTACCAACCTACCA+CGG | - | chr4.2:19807829-19807848 | MS.gene90212:intron | 35.0% | |
| ATGAAACCTCTTGCATATTG+AGG | - | chr4.2:19806773-19806792 | MS.gene90212:CDS | 35.0% | |
| CAAATGCAGCAAATATGGAT+TGG | - | chr4.2:19807380-19807399 | MS.gene90212:intron | 35.0% | |
| CATATATCCACTATATGGAC+TGG | - | chr4.2:19808233-19808252 | MS.gene90212:intron | 35.0% | |
| CTAGGATCTTTGAGTCATTA+AGG | + | chr4.2:19807760-19807779 | None:intergenic | 35.0% | |
| CTTTGTGTATAACAAGGGAA+AGG | - | chr4.2:19806687-19806706 | MS.gene90212:intron | 35.0% | |
| GACACAATTCTTGGTAAATC+AGG | - | chr4.2:19805999-19806018 | MS.gene90212:intron | 35.0% | |
| GAGTATGATGTAATTGTCCT+CGG | - | chr4.2:19805352-19805371 | MS.gene90212:CDS | 35.0% | |
| GATCAAAATGACTACTATGG+AGG | - | chr4.2:19806033-19806052 | MS.gene90212:intron | 35.0% | |
| TCAAAATGACTACTATGGAG+GGG | - | chr4.2:19806035-19806054 | MS.gene90212:CDS | 35.0% | |
| TCAATATGCAAGAGGTTTCA+TGG | + | chr4.2:19806774-19806793 | None:intergenic | 35.0% | |
| TGCAGTGGTTTATCATATAC+CGG | - | chr4.2:19807561-19807580 | MS.gene90212:CDS | 35.0% | |
| TGTAGAGTGATATGGTTTGA+AGG | - | chr4.2:19807533-19807552 | MS.gene90212:CDS | 35.0% | |
| TTCTCAAACAGACCCATTAA+AGG | + | chr4.2:19806881-19806900 | None:intergenic | 35.0% | |
| TTGTCCAAATGCAGCAAATA+TGG | - | chr4.2:19807375-19807394 | MS.gene90212:intron | 35.0% | |
| ! | ACATAGAAGCATGTCCAAAA+AGG | - | chr4.2:19807915-19807934 | MS.gene90212:intron | 35.0% |
| ! | CAATCCATATTTGCTGCATT+TGG | + | chr4.2:19807382-19807401 | None:intergenic | 35.0% |
| ! | CTGCTTCCTTTCTTTTTCTT+CGG | - | chr4.2:19807017-19807036 | MS.gene90212:intron | 35.0% |
| ! | GATTTTCCTCAATATGCAAG+AGG | + | chr4.2:19806782-19806801 | None:intergenic | 35.0% |
| ! | GGAAGCTTTGTGTATAACAA+GGG | - | chr4.2:19806682-19806701 | MS.gene90212:intron | 35.0% |
| ! | TCATCTTGATGACAGTTACT+TGG | - | chr4.2:19807443-19807462 | MS.gene90212:intron | 35.0% |
| ! | TGGAAGCTTTGTGTATAACA+AGG | - | chr4.2:19806681-19806700 | MS.gene90212:intron | 35.0% |
| ! | TTATGTTTGAGGTCGAATAC+CGG | + | chr4.2:19807583-19807602 | None:intergenic | 35.0% |
| !! | CGATACTTTTGATTACTGGA+AGG | - | chr4.2:19808323-19808342 | MS.gene90212:CDS | 35.0% |
| !! | CTGAACTTTAAAGCTGTAGA+TGG | - | chr4.2:19806661-19806680 | MS.gene90212:intron | 35.0% |
| !! | TAATCGGTTTGTGATTTCCA+TGG | - | chr4.2:19809025-19809044 | MS.gene90212:intron | 35.0% |
| !!! | GTCTAGTTTTCCCTTATCAA+AGG | + | chr4.2:19808004-19808023 | None:intergenic | 35.0% |
| ACCAATGATCATGCTACTGA+TGG | - | chr4.2:19809229-19809248 | MS.gene90212:intron | 40.0% | |
| ACCATCAGTAGCATGATCAT+TGG | + | chr4.2:19809233-19809252 | None:intergenic | 40.0% | |
| ATCAGTAGCATGATCATTGG+TGG | + | chr4.2:19809230-19809249 | None:intergenic | 40.0% | |
| ATCCAACAGGTTCAAAACGT+TGG | - | chr4.2:19808837-19808856 | MS.gene90212:intron | 40.0% | |
| CAATGTTGACATGATACCGA+AGG | - | chr4.2:19806251-19806270 | MS.gene90212:intron | 40.0% | |
| CACAAACTTACCTTGCATTC+TGG | + | chr4.2:19808399-19808418 | None:intergenic | 40.0% | |
| CACATCTCTTAATCTCACAC+AGG | - | chr4.2:19806062-19806081 | MS.gene90212:CDS | 40.0% | |
| CAGATGTACAGTAAGATCAC+TGG | - | chr4.2:19809415-19809434 | MS.gene90212:intron | 40.0% | |
| CATGTAGCAATTGGCATGAT+TGG | + | chr4.2:19805904-19805923 | None:intergenic | 40.0% | |
| CTGTGTGAGATTAAGAGATG+TGG | + | chr4.2:19806064-19806083 | None:intergenic | 40.0% | |
| GACAATAGGCAAATCTCACT+AGG | + | chr4.2:19805865-19805884 | None:intergenic | 40.0% | |
| GATACTTTGTAACATCGGTG+TGG | + | chr4.2:19806642-19806661 | None:intergenic | 40.0% | |
| GCACTGAAGTCACCTTTAAT+GGG | - | chr4.2:19806866-19806885 | MS.gene90212:intron | 40.0% | |
| GCTGAATAAACCAGAATGCA+AGG | - | chr4.2:19808386-19808405 | MS.gene90212:intron | 40.0% | |
| GTACAGTAAGATCACTGGAA+AGG | - | chr4.2:19809420-19809439 | MS.gene90212:intron | 40.0% | |
| GTGATTTCCATGGTTATTGC+AGG | - | chr4.2:19809035-19809054 | MS.gene90212:intron | 40.0% | |
| GTGGTTTCAAAGTGTGTTGT+GGG | + | chr4.2:19809379-19809398 | None:intergenic | 40.0% | |
| GTTGCCTTTGACACAATTCT+TGG | - | chr4.2:19805990-19806009 | MS.gene90212:intron | 40.0% | |
| GTTTATGCTCACATCAAGTG+AGG | + | chr4.2:19807108-19807127 | None:intergenic | 40.0% | |
| TCAGTAGCATGATCATTGGT+GGG | + | chr4.2:19809229-19809248 | None:intergenic | 40.0% | |
| TCATAGAAGATCTCATCGAC+TGG | + | chr4.2:19809187-19809206 | None:intergenic | 40.0% | |
| TCTAGCAGATATACCTTGTC+AGG | + | chr4.2:19808695-19808714 | None:intergenic | 40.0% | |
| TGAAACCACAGTGAAAGATG+TGG | - | chr4.2:19809390-19809409 | MS.gene90212:intron | 40.0% | |
| TGGTAGTTTATGATGGCCAA+TGG | - | chr4.2:19806595-19806614 | MS.gene90212:intron | 40.0% | |
| TGTGGTTTCAAAGTGTGTTG+TGG | + | chr4.2:19809380-19809399 | None:intergenic | 40.0% | |
| TTACTTGGATAAGCCAGCTA+AGG | - | chr4.2:19807458-19807477 | MS.gene90212:intron | 40.0% | |
| ! | GGATTTTGTGGACAGAGTTA+AGG | - | chr4.2:19807479-19807498 | MS.gene90212:intron | 40.0% |
| ! | GTCATCAAGATGAAGTGCTA+AGG | + | chr4.2:19807436-19807455 | None:intergenic | 40.0% |
| ! | TAAGCCAGCTAAGGATTTTG+TGG | - | chr4.2:19807467-19807486 | MS.gene90212:intron | 40.0% |
| !! | AAAGGTACCTGCAATAACCA+TGG | + | chr4.2:19809045-19809064 | None:intergenic | 40.0% |
| !! | ATCATATGCGACTTGCTAAC+TGG | + | chr4.2:19807283-19807302 | None:intergenic | 40.0% |
| !! | ATTACTGGAAGGCATTTGCT+CGG | - | chr4.2:19808334-19808353 | MS.gene90212:CDS | 40.0% |
| !! | TTCCAACGTTTTGAACCTGT+TGG | + | chr4.2:19808842-19808861 | None:intergenic | 40.0% |
| AAATGAAGAACTTCCGAGCC+CGG | + | chr4.2:19806907-19806926 | None:intergenic | 45.0% | |
| AACTCTCCCAGTCCATATAG+TGG | + | chr4.2:19808243-19808262 | None:intergenic | 45.0% | |
| AATGATCCCAAGTCTCACGA+AGG | - | chr4.2:19806947-19806966 | MS.gene90212:intron | 45.0% | |
| ACCTTGTCAGGCAGATATGA+TGG | + | chr4.2:19808683-19808702 | None:intergenic | 45.0% | |
| ACGACACATACACCAAACAC+CGG | - | chr4.2:19805584-19805603 | MS.gene90212:CDS | 45.0% | |
| AGACACTAACGACTCTCACT+CGG | - | chr4.2:19808902-19808921 | MS.gene90212:intron | 45.0% | |
| AGGTAGAGTTTGACGCTGAT+GGG | - | chr4.2:19808597-19808616 | MS.gene90212:intron | 45.0% | |
| AGTGGTCTTCTCTCTGTTGA+TGG | - | chr4.2:19805400-19805419 | MS.gene90212:intron | 45.0% | |
| AGTTCCAGCAACAGATGTTG+AGG | - | chr4.2:19806844-19806863 | MS.gene90212:intron | 45.0% | |
| ATCAAGTCCTTCGTGAGACT+TGG | + | chr4.2:19806957-19806976 | None:intergenic | 45.0% | |
| ATTCTGCCACAGAAGCAACT+TGG | - | chr4.2:19808933-19808952 | MS.gene90212:CDS | 45.0% | |
| CAACAGAGAGAAGACCACTA+AGG | + | chr4.2:19805399-19805418 | None:intergenic | 45.0% | |
| CACTAAGGATGCATTCCTTG+AGG | + | chr4.2:19805384-19805403 | None:intergenic | 45.0% | |
| CTCAAGGAATGCATCCTTAG+TGG | - | chr4.2:19805382-19805401 | MS.gene90212:intron | 45.0% | |
| CTGAACCACATCTTTCACTG+TGG | + | chr4.2:19809398-19809417 | None:intergenic | 45.0% | |
| CTGTCCACAAAATCCTTAGC+TGG | + | chr4.2:19807474-19807493 | None:intergenic | 45.0% | |
| GACAAGCTACCAGAGGAATT+GGG | - | chr4.2:19806213-19806232 | MS.gene90212:intron | 45.0% | |
| GAGCATAAGAGCAGCAGAAA+AGG | + | chr4.2:19809063-19809082 | None:intergenic | 45.0% | |
| TAGGTAGAGTTTGACGCTGA+TGG | - | chr4.2:19808596-19808615 | MS.gene90212:intron | 45.0% | |
| TATGATGGCCAATGGAGCTT+TGG | - | chr4.2:19806603-19806622 | MS.gene90212:CDS | 45.0% | |
| TCAAGTCCTTCGTGAGACTT+GGG | + | chr4.2:19806956-19806975 | None:intergenic | 45.0% | |
| TCCATCATATCTGCCTGACA+AGG | - | chr4.2:19808679-19808698 | MS.gene90212:intron | 45.0% | |
| TGACAAGCTACCAGAGGAAT+TGG | - | chr4.2:19806212-19806231 | MS.gene90212:intron | 45.0% | |
| TGTGTGTGTCTGACACCTAT+CGG | + | chr4.2:19805682-19805701 | None:intergenic | 45.0% | |
| TTACGACCAAGTTGCTTCTG+TGG | + | chr4.2:19808942-19808961 | None:intergenic | 45.0% | |
| ! | CGTTAGTGTCTGGAATAGGA+TGG | + | chr4.2:19808893-19808912 | None:intergenic | 45.0% |
| ! | GAGTCGTTAGTGTCTGGAAT+AGG | + | chr4.2:19808897-19808916 | None:intergenic | 45.0% |
| ! | GGCACTGAAGTCACCTTTAA+TGG | - | chr4.2:19806865-19806884 | MS.gene90212:intron | 45.0% |
| ! | GGTAAATCAGGTGTTGCACA+TGG | - | chr4.2:19806011-19806030 | MS.gene90212:intron | 45.0% |
| ! | TCAGCTGTCTTGCTGTAACT+TGG | + | chr4.2:19806985-19807004 | None:intergenic | 45.0% |
| ! | TTTGGTGTATGTGTCGTGTC+TGG | + | chr4.2:19805581-19805600 | None:intergenic | 45.0% |
| !! | CACAAACCGATTAGCTTGTG+TGG | + | chr4.2:19809018-19809037 | None:intergenic | 45.0% |
| !! | TATCGGTGTTAGAGACCGAT+AGG | - | chr4.2:19805664-19805683 | MS.gene90212:intron | 45.0% |
| !! | ACAATTATATTAAATTTAAA+AGG | + | chr4.2:19808292-19808311 | None:intergenic | 5.0% |
| AACCTCCTTGAAAACGTGCG+AGG | + | chr4.2:19808206-19808225 | None:intergenic | 50.0% | |
| AAGCCTGGAATCGATCTCCT+TGG | - | chr4.2:19809160-19809179 | MS.gene90212:intron | 50.0% | |
| ACCTCCTTGAAAACGTGCGA+GGG | + | chr4.2:19808205-19808224 | None:intergenic | 50.0% | |
| AGTGCCTCAACATCTGTTGC+TGG | + | chr4.2:19806851-19806870 | None:intergenic | 50.0% | |
| ATGTTTGACACATCCTGCCG+TGG | + | chr4.2:19807849-19807868 | None:intergenic | 50.0% | |
| CACACGAACCAAAGCTCCAT+TGG | + | chr4.2:19806614-19806633 | None:intergenic | 50.0% | |
| GAGTGAGAGTCGTTAGTGTC+TGG | + | chr4.2:19808903-19808922 | None:intergenic | 50.0% | |
| GATGTAATTGTCCTCGGCAC+TGG | - | chr4.2:19805358-19805377 | MS.gene90212:CDS | 50.0% | |
| GCTCACAATGTAGCTCCCAA+AGG | - | chr4.2:19809079-19809098 | MS.gene90212:intron | 50.0% | |
| GCTTCAATTCCACCTGAGGT+TGG | + | chr4.2:19809144-19809163 | None:intergenic | 50.0% | |
| TTGGTCAGTCTCAGCTTCTG+TGG | + | chr4.2:19809125-19809144 | None:intergenic | 50.0% | |
| ! | AGATCTCATCGACTGGTCCA+AGG | + | chr4.2:19809180-19809199 | None:intergenic | 50.0% |
| ! | GAATCCCTCGCACGTTTTCA+AGG | - | chr4.2:19808198-19808217 | MS.gene90212:intron | 50.0% |
| ! | TCCATCTGAAGTCACACCGA+TGG | + | chr4.2:19808627-19808646 | None:intergenic | 50.0% |
| ! | TGTGGGATCATAGCTCTGCA+AGG | + | chr4.2:19809362-19809381 | None:intergenic | 50.0% |
| AGCTGAGACTGACCAACCTC+AGG | - | chr4.2:19809129-19809148 | MS.gene90212:intron | 55.0% | |
| AGTTACCAACCTACCACGGC+AGG | - | chr4.2:19807833-19807852 | MS.gene90212:intron | 55.0% | |
| CCAGGCTTCAATTCCACCTG+AGG | + | chr4.2:19809148-19809167 | None:intergenic | 55.0% | |
| CCTCAGGTGGAATTGAAGCC+TGG | - | chr4.2:19809145-19809164 | MS.gene90212:intron | 55.0% | |
| GACGCTGATGGGAAAGCCAT+CGG | - | chr4.2:19808608-19808627 | MS.gene90212:intron | 55.0% | |
| GCCATCGGTGTGACTTCAGA+TGG | - | chr4.2:19808623-19808642 | MS.gene90212:intron | 55.0% | |
| GGGAGATGACAAGCTACCAG+AGG | - | chr4.2:19806206-19806225 | MS.gene90212:intron | 55.0% | |
| GGTTTGAAGGACGCTTGCAG+TGG | - | chr4.2:19807546-19807565 | MS.gene90212:CDS | 55.0% | |
| TGAGACTGACCAACCTCAGG+TGG | - | chr4.2:19809132-19809151 | MS.gene90212:intron | 55.0% | |
| TTGACACATCCTGCCGTGGT+AGG | + | chr4.2:19807845-19807864 | None:intergenic | 55.0% | |
| ! | CGGTTGAGTGCTGTGTATGG+TGG | - | chr4.2:19808354-19808373 | MS.gene90212:CDS | 55.0% |
| ! | GCTCGGTTGAGTGCTGTGTA+TGG | - | chr4.2:19808351-19808370 | MS.gene90212:CDS | 55.0% |
| ! | GGTCCAAGGAGATCGATTCC+AGG | + | chr4.2:19809166-19809185 | None:intergenic | 55.0% |
| ! | TGGGTCTGTTTGAGAAGCGC+CGG | - | chr4.2:19806885-19806904 | MS.gene90212:intron | 55.0% |
| !! | TCCCTCGCACGTTTTCAAGG+AGG | - | chr4.2:19808201-19808220 | MS.gene90212:intron | 55.0% |
| ATTCCTTGAGGCCAGTGCCG+AGG | + | chr4.2:19805372-19805391 | None:intergenic | 60.0% | |
| CACATCCTGCCGTGGTAGGT+TGG | + | chr4.2:19807841-19807860 | None:intergenic | 60.0% | |
| CGGCTAGAGCCCAATTCCTC+TGG | + | chr4.2:19806225-19806244 | None:intergenic | 60.0% | |
| CTGCAGCACTTGCAGCACTC+AGG | + | chr4.2:19809632-19809651 | None:intergenic | 60.0% | |
| ! | TGGACTGGGAGAGTTGCCTC+AGG | - | chr4.2:19808248-19808267 | MS.gene90212:intron | 60.0% |
| !! | GGGTCTGTTTGAGAAGCGCC+GGG | - | chr4.2:19806886-19806905 | MS.gene90212:intron | 60.0% |
| !! | TGTTTGAGAAGCGCCGGGCT+CGG | - | chr4.2:19806891-19806910 | MS.gene90212:intron | 60.0% |
| !! | TGTCCTCGGCACTGGCCTCA+AGG | - | chr4.2:19805366-19805385 | MS.gene90212:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 19805343 | 19809662 | 19805343 | ID=MS.gene90212 |
| chr4.2 | mRNA | 19805343 | 19809662 | 19805343 | ID=MS.gene90212.t1;Parent=MS.gene90212 |
| chr4.2 | exon | 19809576 | 19809662 | 19809576 | ID=MS.gene90212.t1.exon1;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19809576 | 19809662 | 19809576 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19808922 | 19808984 | 19808922 | ID=MS.gene90212.t1.exon2;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19808922 | 19808984 | 19808922 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19808733 | 19808816 | 19808733 | ID=MS.gene90212.t1.exon3;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19808733 | 19808816 | 19808733 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19808297 | 19808404 | 19808297 | ID=MS.gene90212.t1.exon4;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19808297 | 19808404 | 19808297 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19807997 | 19808169 | 19807997 | ID=MS.gene90212.t1.exon5;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19807997 | 19808169 | 19807997 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19807505 | 19807616 | 19807505 | ID=MS.gene90212.t1.exon6;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19807505 | 19807616 | 19807505 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19806736 | 19806816 | 19806736 | ID=MS.gene90212.t1.exon7;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19806736 | 19806816 | 19806736 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19806598 | 19806660 | 19806598 | ID=MS.gene90212.t1.exon8;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19806598 | 19806660 | 19806598 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19806305 | 19806406 | 19806305 | ID=MS.gene90212.t1.exon9;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19806305 | 19806406 | 19806305 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19806035 | 19806159 | 19806035 | ID=MS.gene90212.t1.exon10;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19806035 | 19806159 | 19806035 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19805738 | 19805948 | 19805738 | ID=MS.gene90212.t1.exon11;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19805738 | 19805948 | 19805738 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19805564 | 19805638 | 19805564 | ID=MS.gene90212.t1.exon12;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19805564 | 19805638 | 19805564 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| chr4.2 | exon | 19805343 | 19805396 | 19805343 | ID=MS.gene90212.t1.exon13;Parent=MS.gene90212.t1 |
| chr4.2 | CDS | 19805343 | 19805396 | 19805343 | ID=cds.MS.gene90212.t1;Parent=MS.gene90212.t1 |
| Gene Sequence |
| Protein sequence |
