Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24932.t1 | RHN58651.1 | 100 | 207 | 0 | 0 | 1 | 207 | 57 | 263 | 3.40E-116 | 427.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24932.t1 | O24461 | 95.7 | 207 | 9 | 0 | 1 | 207 | 1 | 207 | 1.0e-113 | 410.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24932.t1 | B7FN46 | 100.0 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.4e-116 | 427.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051243 | MS.gene24932 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene24932 | 0.81877 | 1.65E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene24932 | 0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene053058 | MS.gene24932 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene24932 | 0.818469 | 1.93E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene24932 | 0.819602 | 1.07E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene24932 | 0.813985 | 1.94E-51 | -1.69E-46 |
| MS.gene056580 | MS.gene24932 | 0.822666 | 2.10E-53 | -1.69E-46 |
| MS.gene057320 | MS.gene24932 | 0.803948 | 2.73E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene24932 | 0.805567 | 1.25E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene24932 | 0.801254 | 9.82E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene24932 | 0.809153 | 2.18E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24932.t1 | MTR_4g012940 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 4.48e-157 | 432 |
| MS.gene24932.t1 | MTR_2g101890 | 96.098 | 205 | 8 | 0 | 3 | 207 | 5 | 209 | 6.54e-151 | 417 |
| MS.gene24932.t1 | MTR_4g069850 | 88.406 | 207 | 23 | 1 | 1 | 207 | 1 | 206 | 8.41e-137 | 381 |
| MS.gene24932.t1 | MTR_1g097420 | 72.464 | 207 | 57 | 0 | 1 | 207 | 1 | 207 | 8.98e-111 | 315 |
| MS.gene24932.t1 | MTR_1g097420 | 64.103 | 234 | 57 | 1 | 1 | 207 | 1 | 234 | 1.19e-104 | 301 |
| MS.gene24932.t1 | MTR_8g092020 | 64.706 | 204 | 72 | 0 | 2 | 205 | 6 | 209 | 2.98e-100 | 289 |
| MS.gene24932.t1 | MTR_6g039490 | 64.865 | 185 | 65 | 0 | 1 | 185 | 1 | 185 | 1.51e-85 | 252 |
| MS.gene24932.t1 | MTR_1452s0010 | 81.928 | 83 | 15 | 0 | 28 | 110 | 1 | 83 | 1.14e-46 | 149 |
| MS.gene24932.t1 | MTR_5g013900 | 39.216 | 204 | 111 | 3 | 10 | 207 | 11 | 207 | 2.55e-42 | 142 |
| MS.gene24932.t1 | MTR_2g005510 | 36.607 | 224 | 118 | 6 | 1 | 207 | 1 | 217 | 4.12e-41 | 139 |
| MS.gene24932.t1 | MTR_2g005500 | 36.318 | 201 | 118 | 4 | 8 | 205 | 9 | 202 | 1.39e-38 | 132 |
| MS.gene24932.t1 | MTR_4g098950 | 37.438 | 203 | 115 | 3 | 10 | 207 | 11 | 206 | 1.96e-38 | 132 |
| MS.gene24932.t1 | MTR_8g006970 | 37.313 | 201 | 116 | 4 | 8 | 205 | 22 | 215 | 2.16e-38 | 132 |
| MS.gene24932.t1 | MTR_4g064897 | 35.885 | 209 | 116 | 5 | 8 | 205 | 12 | 213 | 2.92e-38 | 132 |
| MS.gene24932.t1 | MTR_3g087160 | 38.235 | 204 | 112 | 4 | 10 | 207 | 11 | 206 | 3.59e-38 | 131 |
| MS.gene24932.t1 | MTR_8g090215 | 39.216 | 204 | 111 | 4 | 10 | 207 | 11 | 207 | 3.86e-38 | 131 |
| MS.gene24932.t1 | MTR_7g081700 | 37.811 | 201 | 114 | 5 | 8 | 205 | 8 | 200 | 6.70e-38 | 130 |
| MS.gene24932.t1 | MTR_2g014990 | 38.500 | 200 | 101 | 7 | 8 | 195 | 13 | 202 | 8.39e-38 | 130 |
| MS.gene24932.t1 | MTR_4g088090 | 37.500 | 200 | 103 | 7 | 8 | 195 | 13 | 202 | 2.54e-37 | 129 |
| MS.gene24932.t1 | MTR_3g069510 | 36.667 | 210 | 114 | 7 | 8 | 205 | 12 | 214 | 3.07e-37 | 129 |
| MS.gene24932.t1 | MTR_1g068740 | 37.379 | 206 | 117 | 5 | 8 | 207 | 15 | 214 | 4.48e-37 | 129 |
| MS.gene24932.t1 | MTR_2g096550 | 38.983 | 177 | 103 | 4 | 8 | 184 | 15 | 186 | 5.41e-37 | 128 |
| MS.gene24932.t1 | MTR_4g079350 | 40.741 | 162 | 89 | 3 | 8 | 169 | 13 | 167 | 8.97e-37 | 128 |
| MS.gene24932.t1 | MTR_1g068730 | 36.893 | 206 | 118 | 5 | 8 | 207 | 15 | 214 | 1.29e-36 | 127 |
| MS.gene24932.t1 | MTR_1g115325 | 35.122 | 205 | 120 | 4 | 8 | 205 | 15 | 213 | 1.85e-36 | 127 |
| MS.gene24932.t1 | MTR_8g006970 | 40.964 | 166 | 91 | 3 | 8 | 173 | 8 | 166 | 3.60e-36 | 125 |
| MS.gene24932.t1 | MTR_7g100020 | 40.476 | 168 | 94 | 3 | 8 | 175 | 15 | 176 | 3.90e-36 | 126 |
| MS.gene24932.t1 | MTR_1686s0010 | 65.000 | 80 | 28 | 0 | 28 | 107 | 1 | 80 | 4.60e-35 | 119 |
| MS.gene24932.t1 | MTR_2g075950 | 33.971 | 209 | 120 | 5 | 8 | 205 | 13 | 214 | 6.91e-35 | 123 |
| MS.gene24932.t1 | MTR_8g036220 | 40.741 | 162 | 89 | 3 | 8 | 169 | 16 | 170 | 1.04e-34 | 123 |
| MS.gene24932.t1 | MTR_1g052475 | 36.508 | 189 | 113 | 3 | 8 | 196 | 15 | 196 | 3.12e-34 | 121 |
| MS.gene24932.t1 | MTR_1663s0010 | 70.667 | 75 | 22 | 0 | 110 | 184 | 1 | 75 | 5.23e-34 | 116 |
| MS.gene24932.t1 | MTR_7g405790 | 36.628 | 172 | 102 | 3 | 8 | 179 | 15 | 179 | 7.04e-34 | 120 |
| MS.gene24932.t1 | MTR_2g090865 | 39.506 | 162 | 91 | 3 | 8 | 169 | 11 | 165 | 1.23e-33 | 120 |
| MS.gene24932.t1 | MTR_6g021790 | 37.791 | 172 | 100 | 3 | 8 | 179 | 6 | 170 | 2.28e-33 | 119 |
| MS.gene24932.t1 | MTR_8g103550 | 35.714 | 182 | 110 | 3 | 3 | 184 | 4 | 178 | 2.96e-33 | 118 |
| MS.gene24932.t1 | MTR_7g051940 | 36.047 | 172 | 103 | 3 | 8 | 179 | 13 | 177 | 4.18e-33 | 118 |
| MS.gene24932.t1 | MTR_4g063160 | 36.232 | 207 | 117 | 6 | 8 | 205 | 15 | 215 | 4.48e-33 | 118 |
| MS.gene24932.t1 | MTR_3g086980 | 37.576 | 165 | 96 | 3 | 8 | 172 | 16 | 173 | 8.91e-33 | 117 |
| MS.gene24932.t1 | MTR_2g083860 | 38.272 | 162 | 93 | 3 | 8 | 169 | 13 | 167 | 2.56e-32 | 116 |
| MS.gene24932.t1 | MTR_8g089985 | 36.095 | 169 | 101 | 3 | 4 | 172 | 13 | 174 | 3.62e-32 | 116 |
| MS.gene24932.t1 | MTR_8g031680 | 36.702 | 188 | 109 | 4 | 9 | 196 | 7 | 184 | 3.66e-32 | 115 |
| MS.gene24932.t1 | MTR_0262s0050 | 38.788 | 165 | 94 | 3 | 8 | 172 | 15 | 172 | 6.06e-32 | 115 |
| MS.gene24932.t1 | MTR_3g064390 | 35.632 | 174 | 105 | 3 | 10 | 183 | 12 | 178 | 1.73e-31 | 114 |
| MS.gene24932.t1 | MTR_1g078200 | 37.126 | 167 | 98 | 4 | 8 | 174 | 14 | 173 | 2.70e-31 | 114 |
| MS.gene24932.t1 | MTR_5g076590 | 35.632 | 174 | 105 | 3 | 10 | 183 | 12 | 178 | 3.13e-31 | 113 |
| MS.gene24932.t1 | MTR_6g079550 | 37.654 | 162 | 94 | 3 | 8 | 169 | 12 | 166 | 4.73e-31 | 113 |
| MS.gene24932.t1 | MTR_2g027660 | 37.654 | 162 | 94 | 3 | 8 | 169 | 6 | 160 | 5.18e-31 | 113 |
| MS.gene24932.t1 | MTR_4g099470 | 38.068 | 176 | 98 | 5 | 33 | 205 | 9 | 176 | 6.78e-31 | 111 |
| MS.gene24932.t1 | MTR_8g027220 | 33.032 | 221 | 127 | 6 | 1 | 207 | 19 | 232 | 6.70e-30 | 110 |
| MS.gene24932.t1 | MTR_8g107070 | 38.272 | 162 | 93 | 3 | 8 | 169 | 14 | 168 | 1.34e-29 | 110 |
| MS.gene24932.t1 | MTR_8g031870 | 35.758 | 165 | 99 | 3 | 5 | 169 | 3 | 160 | 2.17e-29 | 108 |
| MS.gene24932.t1 | MTR_1g094220 | 34.503 | 171 | 104 | 4 | 5 | 174 | 28 | 191 | 9.79e-29 | 106 |
| MS.gene24932.t1 | MTR_8g093740 | 36.842 | 171 | 100 | 5 | 8 | 177 | 13 | 176 | 9.87e-29 | 107 |
| MS.gene24932.t1 | MTR_8g031660 | 36.257 | 171 | 102 | 3 | 8 | 178 | 6 | 169 | 4.04e-28 | 105 |
| MS.gene24932.t1 | MTR_1g094220 | 33.146 | 178 | 111 | 4 | 5 | 181 | 28 | 198 | 4.21e-28 | 105 |
| MS.gene24932.t1 | MTR_1g068730 | 40.650 | 123 | 69 | 1 | 8 | 130 | 15 | 133 | 5.26e-28 | 103 |
| MS.gene24932.t1 | MTR_7g117910 | 37.162 | 148 | 85 | 3 | 8 | 155 | 20 | 159 | 8.99e-28 | 104 |
| MS.gene24932.t1 | MTR_1g068740 | 40.650 | 123 | 69 | 1 | 8 | 130 | 15 | 133 | 9.78e-28 | 104 |
| MS.gene24932.t1 | MTR_1812s0010 | 60.274 | 73 | 29 | 0 | 111 | 183 | 2 | 74 | 3.71e-27 | 99.0 |
| MS.gene24932.t1 | MTR_1g029450 | 33.663 | 202 | 108 | 6 | 8 | 190 | 17 | 211 | 5.24e-27 | 102 |
| MS.gene24932.t1 | MTR_1g094220 | 33.333 | 168 | 104 | 4 | 5 | 171 | 28 | 188 | 1.20e-26 | 101 |
| MS.gene24932.t1 | MTR_1g094220 | 33.533 | 167 | 103 | 4 | 5 | 170 | 28 | 187 | 1.43e-26 | 102 |
| MS.gene24932.t1 | MTR_8g031830 | 33.679 | 193 | 110 | 5 | 5 | 197 | 3 | 177 | 2.38e-26 | 100 |
| MS.gene24932.t1 | MTR_7g103070 | 36.970 | 165 | 97 | 5 | 10 | 173 | 18 | 176 | 2.42e-26 | 100 |
| MS.gene24932.t1 | MTR_2g102060 | 31.053 | 190 | 124 | 3 | 10 | 199 | 12 | 194 | 2.78e-26 | 100 |
| MS.gene24932.t1 | MTR_1g090717 | 37.805 | 164 | 94 | 5 | 9 | 170 | 16 | 173 | 2.17e-25 | 98.6 |
| MS.gene24932.t1 | MTR_3g096350 | 35.976 | 164 | 97 | 5 | 8 | 170 | 12 | 168 | 2.37e-25 | 98.2 |
| MS.gene24932.t1 | MTR_1g062760 | 36.364 | 165 | 97 | 5 | 10 | 173 | 16 | 173 | 4.75e-25 | 97.4 |
| MS.gene24932.t1 | MTR_2g093510 | 74.627 | 67 | 17 | 0 | 119 | 185 | 761 | 827 | 8.88e-25 | 101 |
| MS.gene24932.t1 | MTR_3g064390 | 38.017 | 121 | 71 | 1 | 10 | 130 | 12 | 128 | 1.92e-24 | 94.7 |
| MS.gene24932.t1 | MTR_3g107717 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 1.76e-22 | 91.3 |
| MS.gene24932.t1 | MTR_3g107713 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.01e-22 | 90.9 |
| MS.gene24932.t1 | MTR_3g107707 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.03e-22 | 90.9 |
| MS.gene24932.t1 | MTR_3g096350 | 38.525 | 122 | 70 | 3 | 8 | 128 | 12 | 129 | 6.47e-22 | 87.8 |
| MS.gene24932.t1 | MTR_3g096350 | 38.525 | 122 | 70 | 3 | 8 | 128 | 12 | 129 | 1.28e-21 | 87.0 |
| MS.gene24932.t1 | MTR_6g087980 | 30.769 | 208 | 120 | 7 | 8 | 206 | 6 | 198 | 1.19e-20 | 85.9 |
| MS.gene24932.t1 | MTR_8g093740 | 37.594 | 133 | 76 | 4 | 39 | 170 | 10 | 136 | 2.15e-20 | 84.3 |
| MS.gene24932.t1 | MTR_4g088055 | 30.108 | 186 | 113 | 6 | 1 | 177 | 1 | 178 | 8.83e-18 | 78.2 |
| MS.gene24932.t1 | MTR_5g036990 | 52.857 | 70 | 32 | 1 | 39 | 107 | 32 | 101 | 1.39e-17 | 75.5 |
| MS.gene24932.t1 | MTR_4g113620 | 29.480 | 173 | 99 | 6 | 9 | 179 | 14 | 165 | 2.23e-17 | 77.4 |
| MS.gene24932.t1 | MTR_2g090875 | 29.609 | 179 | 111 | 5 | 8 | 177 | 6 | 178 | 5.52e-17 | 75.9 |
| MS.gene24932.t1 | MTR_3g078260 | 30.481 | 187 | 115 | 5 | 1 | 178 | 1 | 181 | 1.22e-16 | 75.5 |
| MS.gene24932.t1 | MTR_5g022600 | 29.570 | 186 | 114 | 7 | 1 | 177 | 1 | 178 | 1.48e-16 | 74.7 |
| MS.gene24932.t1 | MTR_8g075240 | 30.108 | 186 | 113 | 7 | 1 | 177 | 1 | 178 | 3.47e-16 | 73.9 |
| MS.gene24932.t1 | MTR_7g103070 | 38.983 | 118 | 65 | 5 | 57 | 173 | 9 | 120 | 5.92e-16 | 72.4 |
| MS.gene24932.t1 | MTR_4g073250 | 27.419 | 186 | 120 | 4 | 8 | 184 | 6 | 185 | 1.20e-15 | 72.4 |
| MS.gene24932.t1 | MTR_3g078260 | 35.156 | 128 | 76 | 4 | 1 | 127 | 1 | 122 | 1.38e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24932.t1 | AT1G52280 | 91.304 | 207 | 17 | 1 | 1 | 207 | 1 | 206 | 3.93e-142 | 395 |
| MS.gene24932.t1 | AT3G16100 | 90.821 | 207 | 18 | 1 | 1 | 207 | 1 | 206 | 1.42e-141 | 393 |
| MS.gene24932.t1 | AT3G18820 | 89.855 | 207 | 20 | 1 | 1 | 207 | 1 | 206 | 6.00e-138 | 384 |
| MS.gene24932.t1 | AT1G49300 | 87.440 | 207 | 25 | 1 | 1 | 207 | 1 | 206 | 8.45e-134 | 374 |
| MS.gene24932.t1 | AT1G49300 | 87.440 | 207 | 25 | 1 | 1 | 207 | 1 | 206 | 8.45e-134 | 374 |
| MS.gene24932.t1 | AT4G09720 | 70.952 | 210 | 54 | 2 | 1 | 207 | 1 | 206 | 4.35e-109 | 311 |
| MS.gene24932.t1 | AT1G22740 | 71.635 | 208 | 53 | 2 | 1 | 207 | 1 | 203 | 6.93e-109 | 311 |
| MS.gene24932.t1 | AT4G09720 | 67.421 | 221 | 54 | 3 | 1 | 207 | 1 | 217 | 1.83e-105 | 302 |
| MS.gene24932.t1 | AT4G09720 | 68.837 | 215 | 55 | 3 | 1 | 207 | 1 | 211 | 2.04e-105 | 302 |
| MS.gene24932.t1 | AT2G21880 | 63.551 | 214 | 62 | 3 | 4 | 207 | 5 | 212 | 2.55e-94 | 274 |
| MS.gene24932.t1 | AT4G09720 | 68.571 | 175 | 48 | 2 | 36 | 207 | 2 | 172 | 1.65e-85 | 250 |
| MS.gene24932.t1 | AT4G09720 | 68.571 | 175 | 48 | 2 | 36 | 207 | 2 | 172 | 1.65e-85 | 250 |
| MS.gene24932.t1 | AT4G09720 | 68.571 | 175 | 48 | 2 | 36 | 207 | 2 | 172 | 1.65e-85 | 250 |
| MS.gene24932.t1 | AT2G21880 | 59.813 | 214 | 62 | 4 | 4 | 207 | 5 | 204 | 1.40e-84 | 249 |
| MS.gene24932.t1 | AT2G21880 | 61.658 | 193 | 58 | 3 | 25 | 207 | 1 | 187 | 1.06e-80 | 239 |
| MS.gene24932.t1 | AT2G21880 | 61.658 | 193 | 58 | 3 | 25 | 207 | 1 | 187 | 1.06e-80 | 239 |
| MS.gene24932.t1 | AT5G39620 | 58.140 | 172 | 72 | 0 | 9 | 180 | 6 | 177 | 5.20e-71 | 215 |
| MS.gene24932.t1 | AT2G44610 | 39.512 | 205 | 110 | 4 | 10 | 207 | 11 | 208 | 5.08e-41 | 138 |
| MS.gene24932.t1 | AT1G28550 | 37.143 | 210 | 113 | 5 | 8 | 205 | 13 | 215 | 3.00e-39 | 134 |
| MS.gene24932.t1 | AT1G09630 | 41.818 | 165 | 89 | 3 | 8 | 172 | 12 | 169 | 3.54e-39 | 134 |
| MS.gene24932.t1 | AT5G45750 | 36.364 | 209 | 114 | 6 | 8 | 205 | 13 | 213 | 8.93e-38 | 130 |
| MS.gene24932.t1 | AT2G33870 | 35.238 | 210 | 117 | 5 | 8 | 205 | 13 | 215 | 1.45e-37 | 130 |
| MS.gene24932.t1 | AT5G60860 | 38.384 | 198 | 104 | 6 | 8 | 195 | 13 | 202 | 1.70e-37 | 130 |
| MS.gene24932.t1 | AT3G15060 | 41.358 | 162 | 88 | 3 | 8 | 169 | 13 | 167 | 3.34e-37 | 129 |
| MS.gene24932.t1 | AT4G17530 | 39.548 | 177 | 97 | 4 | 8 | 181 | 8 | 177 | 3.39e-37 | 129 |
| MS.gene24932.t1 | AT5G59840 | 37.379 | 206 | 115 | 5 | 8 | 205 | 15 | 214 | 3.95e-37 | 129 |
| MS.gene24932.t1 | AT5G47200 | 37.811 | 201 | 113 | 5 | 8 | 205 | 8 | 199 | 6.01e-37 | 128 |
| MS.gene24932.t1 | AT5G64990 | 39.810 | 211 | 101 | 8 | 10 | 207 | 9 | 206 | 6.70e-37 | 128 |
| MS.gene24932.t1 | AT4G18430 | 34.762 | 210 | 117 | 7 | 8 | 205 | 13 | 214 | 1.73e-36 | 127 |
| MS.gene24932.t1 | AT3G53610 | 38.350 | 206 | 113 | 7 | 8 | 205 | 15 | 214 | 2.21e-36 | 127 |
| MS.gene24932.t1 | AT3G53610 | 38.350 | 206 | 113 | 7 | 8 | 205 | 15 | 214 | 2.21e-36 | 127 |
| MS.gene24932.t1 | AT3G53610 | 38.350 | 206 | 113 | 7 | 8 | 205 | 15 | 214 | 2.21e-36 | 127 |
| MS.gene24932.t1 | AT1G02130 | 35.821 | 201 | 119 | 4 | 8 | 205 | 8 | 201 | 2.45e-36 | 126 |
| MS.gene24932.t1 | AT5G10260 | 37.561 | 205 | 113 | 4 | 10 | 207 | 11 | 207 | 3.86e-36 | 126 |
| MS.gene24932.t1 | AT5G59150 | 38.182 | 165 | 95 | 3 | 8 | 172 | 12 | 169 | 4.98e-36 | 126 |
| MS.gene24932.t1 | AT3G46060 | 36.408 | 206 | 117 | 5 | 8 | 205 | 15 | 214 | 7.54e-36 | 125 |
| MS.gene24932.t1 | AT3G46060 | 36.408 | 206 | 117 | 5 | 8 | 205 | 15 | 214 | 7.54e-36 | 125 |
| MS.gene24932.t1 | AT3G46060 | 36.408 | 206 | 117 | 5 | 8 | 205 | 15 | 214 | 7.54e-36 | 125 |
| MS.gene24932.t1 | AT3G11730 | 35.407 | 209 | 124 | 4 | 1 | 205 | 1 | 202 | 7.94e-36 | 125 |
| MS.gene24932.t1 | AT1G07410 | 38.182 | 165 | 95 | 3 | 8 | 172 | 12 | 169 | 1.24e-35 | 125 |
| MS.gene24932.t1 | AT1G05810 | 35.714 | 182 | 110 | 3 | 4 | 185 | 8 | 182 | 1.32e-35 | 125 |
| MS.gene24932.t1 | AT3G46830 | 38.788 | 165 | 94 | 3 | 8 | 172 | 12 | 169 | 1.48e-35 | 125 |
| MS.gene24932.t1 | AT3G46830 | 38.788 | 165 | 94 | 3 | 8 | 172 | 12 | 169 | 1.48e-35 | 125 |
| MS.gene24932.t1 | AT1G05810 | 35.714 | 182 | 110 | 3 | 4 | 185 | 54 | 228 | 4.01e-35 | 125 |
| MS.gene24932.t1 | AT3G12160 | 40.606 | 165 | 91 | 3 | 8 | 172 | 15 | 172 | 7.32e-35 | 123 |
| MS.gene24932.t1 | AT4G39890 | 40.000 | 165 | 93 | 2 | 9 | 173 | 10 | 168 | 1.15e-34 | 122 |
| MS.gene24932.t1 | AT2G31680 | 34.831 | 178 | 109 | 3 | 8 | 185 | 12 | 182 | 1.78e-34 | 122 |
| MS.gene24932.t1 | AT5G64990 | 38.532 | 218 | 101 | 9 | 10 | 207 | 9 | 213 | 3.88e-34 | 121 |
| MS.gene24932.t1 | AT1G06400 | 34.928 | 209 | 117 | 6 | 8 | 205 | 13 | 213 | 3.93e-34 | 121 |
| MS.gene24932.t1 | AT4G18800 | 39.506 | 162 | 91 | 3 | 8 | 169 | 13 | 167 | 5.05e-34 | 120 |
| MS.gene24932.t1 | AT5G03520 | 41.667 | 168 | 92 | 3 | 8 | 175 | 15 | 176 | 7.82e-34 | 120 |
| MS.gene24932.t1 | AT2G22290 | 36.408 | 206 | 114 | 4 | 10 | 207 | 11 | 207 | 9.21e-34 | 120 |
| MS.gene24932.t1 | AT4G35860 | 37.791 | 172 | 100 | 3 | 8 | 179 | 6 | 170 | 1.47e-33 | 119 |
| MS.gene24932.t1 | AT5G47960 | 36.757 | 185 | 101 | 4 | 8 | 183 | 15 | 192 | 1.90e-33 | 119 |
| MS.gene24932.t1 | AT1G16920 | 38.889 | 162 | 92 | 4 | 8 | 169 | 13 | 167 | 2.47e-33 | 119 |
| MS.gene24932.t1 | AT4G39990 | 37.576 | 165 | 96 | 3 | 8 | 172 | 17 | 174 | 3.05e-33 | 119 |
| MS.gene24932.t1 | AT2G43130 | 34.831 | 178 | 109 | 3 | 8 | 185 | 12 | 182 | 3.27e-33 | 119 |
| MS.gene24932.t1 | AT4G19640 | 36.612 | 183 | 106 | 4 | 10 | 189 | 12 | 187 | 9.08e-33 | 117 |
| MS.gene24932.t1 | AT1G18200 | 40.123 | 162 | 90 | 3 | 8 | 169 | 13 | 167 | 9.36e-33 | 118 |
| MS.gene24932.t1 | AT3G09900 | 42.262 | 168 | 91 | 4 | 8 | 175 | 15 | 176 | 9.50e-33 | 117 |
| MS.gene24932.t1 | AT5G45130 | 35.678 | 199 | 114 | 5 | 10 | 205 | 12 | 199 | 9.58e-33 | 117 |
| MS.gene24932.t1 | AT4G17160 | 34.314 | 204 | 120 | 4 | 9 | 205 | 7 | 203 | 2.78e-32 | 116 |
| MS.gene24932.t1 | AT5G65270 | 36.364 | 165 | 98 | 3 | 8 | 172 | 17 | 174 | 4.82e-32 | 116 |
| MS.gene24932.t1 | AT3G07410 | 35.465 | 172 | 104 | 3 | 8 | 179 | 12 | 176 | 7.89e-32 | 115 |
| MS.gene24932.t1 | AT5G45130 | 35.533 | 197 | 113 | 5 | 12 | 205 | 22 | 207 | 9.25e-32 | 115 |
| MS.gene24932.t1 | AT1G73640 | 38.889 | 162 | 92 | 3 | 8 | 169 | 13 | 167 | 2.96e-31 | 114 |
| MS.gene24932.t1 | AT4G17170 | 37.654 | 162 | 94 | 3 | 8 | 169 | 6 | 160 | 5.66e-31 | 113 |
| MS.gene24932.t1 | AT5G47520 | 33.673 | 196 | 118 | 5 | 8 | 198 | 14 | 202 | 6.95e-31 | 113 |
| MS.gene24932.t1 | AT1G01200 | 36.420 | 162 | 97 | 2 | 8 | 169 | 28 | 183 | 1.45e-29 | 110 |
| MS.gene24932.t1 | AT3G54840 | 34.503 | 171 | 104 | 4 | 2 | 171 | 27 | 190 | 1.64e-29 | 108 |
| MS.gene24932.t1 | AT3G54840 | 33.702 | 181 | 112 | 4 | 2 | 181 | 27 | 200 | 1.74e-29 | 108 |
| MS.gene24932.t1 | AT3G54840 | 34.302 | 172 | 105 | 4 | 11 | 181 | 2 | 166 | 1.65e-28 | 105 |
| MS.gene24932.t1 | AT1G43890 | 36.416 | 173 | 102 | 5 | 8 | 179 | 13 | 178 | 2.45e-27 | 103 |
| MS.gene24932.t1 | AT1G43890 | 36.416 | 173 | 102 | 5 | 8 | 179 | 13 | 178 | 2.45e-27 | 103 |
| MS.gene24932.t1 | AT1G43890 | 36.416 | 173 | 102 | 5 | 8 | 179 | 13 | 178 | 2.45e-27 | 103 |
| MS.gene24932.t1 | AT5G03530 | 35.052 | 194 | 100 | 7 | 10 | 184 | 15 | 201 | 1.95e-26 | 101 |
| MS.gene24932.t1 | AT5G03530 | 35.052 | 194 | 100 | 7 | 10 | 184 | 15 | 201 | 1.95e-26 | 101 |
| MS.gene24932.t1 | AT4G19640 | 37.226 | 137 | 81 | 2 | 10 | 146 | 12 | 143 | 6.69e-26 | 98.2 |
| MS.gene24932.t1 | AT5G03520 | 42.424 | 132 | 70 | 3 | 44 | 175 | 41 | 166 | 2.18e-25 | 98.6 |
| MS.gene24932.t1 | AT4G19640 | 39.167 | 120 | 69 | 1 | 10 | 129 | 12 | 127 | 1.32e-24 | 95.9 |
| MS.gene24932.t1 | AT5G20020 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.04e-22 | 90.9 |
| MS.gene24932.t1 | AT5G55190 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.09e-22 | 90.9 |
| MS.gene24932.t1 | AT5G20010 | 31.792 | 173 | 94 | 6 | 9 | 174 | 14 | 169 | 2.13e-22 | 90.9 |
| MS.gene24932.t1 | AT5G59150 | 37.398 | 123 | 70 | 3 | 50 | 172 | 3 | 118 | 1.65e-21 | 87.0 |
| MS.gene24932.t1 | AT3G09910 | 34.302 | 172 | 105 | 5 | 9 | 179 | 14 | 178 | 3.39e-21 | 87.0 |
| MS.gene24932.t1 | AT3G09910 | 34.302 | 172 | 105 | 5 | 9 | 179 | 14 | 178 | 3.39e-21 | 87.0 |
| MS.gene24932.t1 | AT5G55080 | 28.916 | 166 | 108 | 3 | 9 | 174 | 14 | 169 | 6.06e-21 | 87.0 |
| MS.gene24932.t1 | AT4G35860 | 36.923 | 130 | 75 | 3 | 50 | 179 | 2 | 124 | 1.11e-20 | 85.1 |
| MS.gene24932.t1 | AT3G09910 | 34.337 | 166 | 101 | 5 | 9 | 173 | 14 | 172 | 1.53e-20 | 85.5 |
| MS.gene24932.t1 | AT3G09910 | 34.337 | 166 | 101 | 5 | 9 | 173 | 14 | 172 | 1.53e-20 | 85.5 |
| MS.gene24932.t1 | AT3G09910 | 34.337 | 166 | 101 | 5 | 9 | 173 | 14 | 172 | 1.53e-20 | 85.5 |
| MS.gene24932.t1 | AT4G28950 | 30.583 | 206 | 122 | 7 | 8 | 206 | 6 | 197 | 2.35e-20 | 85.1 |
| MS.gene24932.t1 | AT5G62880 | 31.551 | 187 | 113 | 5 | 1 | 178 | 1 | 181 | 1.15e-17 | 78.2 |
| MS.gene24932.t1 | AT3G48040 | 31.551 | 187 | 113 | 5 | 1 | 178 | 1 | 181 | 1.86e-17 | 77.4 |
| MS.gene24932.t1 | AT5G45970 | 28.889 | 180 | 113 | 5 | 8 | 178 | 6 | 179 | 4.86e-17 | 76.3 |
| MS.gene24932.t1 | AT1G20090 | 29.570 | 186 | 113 | 6 | 1 | 177 | 1 | 177 | 1.36e-16 | 75.1 |
| MS.gene24932.t1 | AT4G35020 | 28.877 | 187 | 116 | 5 | 1 | 178 | 1 | 179 | 5.90e-16 | 73.2 |
| MS.gene24932.t1 | AT4G35020 | 28.877 | 187 | 116 | 5 | 1 | 178 | 1 | 179 | 5.90e-16 | 73.2 |
| MS.gene24932.t1 | AT4G35020 | 28.877 | 187 | 116 | 5 | 1 | 178 | 1 | 179 | 5.90e-16 | 73.2 |
| MS.gene24932.t1 | AT5G62880 | 31.667 | 180 | 108 | 5 | 1 | 171 | 1 | 174 | 1.06e-15 | 72.4 |
| MS.gene24932.t1 | AT3G51300 | 29.032 | 186 | 115 | 6 | 1 | 177 | 1 | 178 | 1.53e-15 | 72.0 |
| MS.gene24932.t1 | AT1G75840 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 1.54e-15 | 72.0 |
| MS.gene24932.t1 | AT2G44690 | 29.240 | 171 | 106 | 5 | 8 | 169 | 18 | 182 | 2.20e-15 | 72.0 |
| MS.gene24932.t1 | AT3G48040 | 35.385 | 130 | 77 | 4 | 1 | 129 | 1 | 124 | 3.67e-15 | 70.9 |
| MS.gene24932.t1 | AT2G17800 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 8.07e-15 | 70.1 |
| MS.gene24932.t1 | AT2G17800 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 8.07e-15 | 70.1 |
| MS.gene24932.t1 | AT4G35950 | 28.495 | 186 | 116 | 6 | 1 | 177 | 1 | 178 | 1.10e-14 | 70.1 |
| MS.gene24932.t1 | AT5G09910 | 25.510 | 196 | 116 | 5 | 9 | 176 | 23 | 216 | 3.32e-14 | 70.5 |
| MS.gene24932.t1 | AT5G09910 | 25.510 | 196 | 116 | 5 | 9 | 176 | 23 | 216 | 3.32e-14 | 70.5 |
| MS.gene24932.t1 | AT4G35020 | 32.031 | 128 | 78 | 5 | 1 | 127 | 1 | 120 | 2.34e-12 | 62.4 |
| MS.gene24932.t1 | AT4G35020 | 32.031 | 128 | 78 | 5 | 1 | 127 | 1 | 120 | 2.34e-12 | 62.4 |
Find 45 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTCCCATTTGTTGTATT+GGG | 0.249578 | 4.3:-84391509 | MS.gene24932:CDS |
| AAAACTCACATTTCTTCTTC+AGG | 0.276765 | 4.3:+84391049 | None:intergenic |
| TTTGCGGATGTCTCAAAGTA+TGG | 0.279148 | 4.3:+84391133 | None:intergenic |
| AAACTTCCCATTTGTTGTAT+TGG | 0.287627 | 4.3:-84391510 | MS.gene24932:CDS |
| GAGAGAAGAATTTCTCATTC+AGG | 0.301835 | 4.3:-84391655 | MS.gene24932:intron |
| TTGTTTCCCAATACAACAAA+TGG | 0.354677 | 4.3:+84391503 | None:intergenic |
| ATTCTTCTCTCCAATGGTTA+AGG | 0.368122 | 4.3:+84391667 | None:intergenic |
| AGACAGGTTGTTCACATTGC+AGG | 0.380730 | 4.3:-84393041 | MS.gene24932:intron |
| GTCTTGGTGTGGCTTTCTAC+CGG | 0.383425 | 4.3:-84391746 | MS.gene24932:CDS |
| GTCTTCAAATTGAACTTCCT+TGG | 0.388732 | 4.3:+84393060 | None:intergenic |
| GTCATTATCCTCGGTGATAG+TGG | 0.400216 | 4.3:-84393687 | MS.gene24932:CDS |
| TCTTGGTGTGGCTTTCTACC+GGG | 0.439363 | 4.3:-84391745 | MS.gene24932:CDS |
| CTTTCGAGAACCTTAACCAT+TGG | 0.448271 | 4.3:-84391677 | MS.gene24932:CDS |
| AGGAAGTTCAATTTGAAGAC+AGG | 0.464928 | 4.3:-84393057 | MS.gene24932:CDS |
| CAAGAGCGGTTTCAGAGTCT+TGG | 0.478744 | 4.3:-84391762 | MS.gene24932:CDS |
| GGAAACAAAATAGACGTTGA+TGG | 0.480216 | 4.3:-84391488 | MS.gene24932:CDS |
| TTTGAGACATCCGCAAAAGA+AGG | 0.487885 | 4.3:-84391127 | MS.gene24932:CDS |
| AAAGGCATGGTGTGCTTCGA+AGG | 0.499384 | 4.3:-84391164 | MS.gene24932:CDS |
| TGAGAAATTCTTCTCTCCAA+TGG | 0.527269 | 4.3:+84391661 | None:intergenic |
| TTGCCGACATCGATTGTGTC+GGG | 0.530187 | 4.3:+84390321 | None:intergenic |
| TTGCATTTAGGTATGTGAAT+CGG | 0.536926 | 4.3:-84393129 | MS.gene24932:intron |
| TGTTTCCCAATACAACAAAT+GGG | 0.537587 | 4.3:+84391504 | None:intergenic |
| ACAATCGATGTCGGCAATGG+TGG | 0.539871 | 4.3:-84390315 | MS.gene24932:CDS |
| TTGTTAAAAGTCATTATCCT+CGG | 0.545319 | 4.3:-84393696 | MS.gene24932:CDS |
| AACAAAATAGACGTTGATGG+TGG | 0.573478 | 4.3:-84391485 | MS.gene24932:CDS |
| GACACAATCGATGTCGGCAA+TGG | 0.578998 | 4.3:-84390318 | MS.gene24932:CDS |
| AATCAGTACAAGGCTACCAT+TGG | 0.582311 | 4.3:-84393097 | MS.gene24932:CDS |
| CTTGGTGTGGCTTTCTACCG+GGG | 0.583346 | 4.3:-84391744 | MS.gene24932:CDS |
| TACTCAACATTCACAGCCTG+TGG | 0.585248 | 4.3:+84390278 | None:intergenic |
| ACACAGATTTGGGATACTGC+TGG | 0.585651 | 4.3:-84391786 | MS.gene24932:intron |
| ACAAAATAGACGTTGATGGT+GGG | 0.586912 | 4.3:-84391484 | MS.gene24932:CDS |
| GCGGTTTCAGAGTCTTGGTG+TGG | 0.587655 | 4.3:-84391757 | MS.gene24932:CDS |
| TCATTATCCTCGGTGATAGT+GGG | 0.588594 | 4.3:-84393686 | MS.gene24932:intron |
| GGACGACAACAGAGATCCAC+AGG | 0.593912 | 4.3:-84390294 | MS.gene24932:CDS |
| GGTGAGAAAATCAGCACCAA+TGG | 0.597199 | 4.3:+84393081 | None:intergenic |
| CTGAGAAGAAAGCAAAGGCA+TGG | 0.611252 | 4.3:-84391177 | MS.gene24932:CDS |
| GGGATACTGCTGGTCAAGAG+CGG | 0.626594 | 4.3:-84391776 | MS.gene24932:CDS |
| AAGGCATGGTGTGCTTCGAA+GGG | 0.629402 | 4.3:-84391163 | MS.gene24932:CDS |
| GAAGTTTAGTAATCAGTACA+AGG | 0.630236 | 4.3:-84393107 | MS.gene24932:CDS |
| CTGCCCGACACAATCGATGT+CGG | 0.645647 | 4.3:-84390324 | MS.gene24932:CDS |
| ATTGCCGACATCGATTGTGT+CGG | 0.650688 | 4.3:+84390320 | None:intergenic |
| GGTTTCTGAGAAGAAAGCAA+AGG | 0.669924 | 4.3:-84391182 | MS.gene24932:CDS |
| TGACATTTACATCATAAACA+AGG | 0.673979 | 4.3:+84391706 | None:intergenic |
| GGACGCAGCAATCAGCACCC+CGG | 0.684255 | 4.3:+84391727 | None:intergenic |
| CAGCATACCCACTATCACCG+AGG | 0.788599 | 4.3:+84393679 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAAAATTAATGAATA+AGG | + | chr4.3:84393186-84393205 | None:intergenic | 10.0% |
| !! | AAGGTTATAAAATTAAAATT+TGG | - | chr4.3:84391922-84391941 | MS.gene24932:intron | 10.0% |
| !! | TATAAAATTAAAATTTGGAA+AGG | - | chr4.3:84391927-84391946 | MS.gene24932:intron | 10.0% |
| !! | CAAAATTAACCAAAAAAAAA+AGG | + | chr4.3:84393383-84393402 | None:intergenic | 15.0% |
| !! | TCAAATTTAACAAAATTTGA+TGG | - | chr4.3:84390477-84390496 | MS.gene24932:intron | 15.0% |
| !! | TTCTTAAATAAAAAGAGATA+TGG | + | chr4.3:84392409-84392428 | None:intergenic | 15.0% |
| !!! | AAAATCAATGAATGATTTTA+AGG | - | chr4.3:84393079-84393098 | MS.gene24932:CDS | 15.0% |
| !!! | AAATCAATGAATGATTTTAA+GGG | - | chr4.3:84393080-84393099 | MS.gene24932:CDS | 15.0% |
| !!! | ACAGATTTTATATCATAAAA+TGG | + | chr4.3:84391029-84391048 | None:intergenic | 15.0% |
| !!! | AGTTGAAAAAACAATATTTT+TGG | - | chr4.3:84391681-84391700 | MS.gene24932:CDS | 15.0% |
| !!! | TTTTTTGAATTTATTTTGCA+GGG | - | chr4.3:84390715-84390734 | MS.gene24932:intron | 15.0% |
| !!! | TTTTTTTGAATTTATTTTGC+AGG | - | chr4.3:84390714-84390733 | MS.gene24932:intron | 15.0% |
| !! | AAATTATATGTCGCAAATAA+AGG | - | chr4.3:84392756-84392775 | MS.gene24932:intron | 20.0% |
| !! | ATAACTTTGTATGTAATCTA+AGG | - | chr4.3:84391068-84391087 | MS.gene24932:CDS | 20.0% |
| !! | ATAGAAGTAATATACAAAAC+TGG | + | chr4.3:84391639-84391658 | None:intergenic | 20.0% |
| !! | ATCTTTGATATTCTCATTAA+TGG | - | chr4.3:84393140-84393159 | MS.gene24932:intron | 20.0% |
| !! | ATTAACCAAAAAAAAAAGGT+TGG | + | chr4.3:84393379-84393398 | None:intergenic | 20.0% |
| !! | CTCATTTAAAGAATGTTTAT+CGG | - | chr4.3:84393230-84393249 | MS.gene24932:intron | 20.0% |
| !! | TGAAAATGTCATATCTATAT+TGG | - | chr4.3:84393516-84393535 | MS.gene24932:intron | 20.0% |
| !! | TTAATGAGAATATCAAAGAT+TGG | + | chr4.3:84393140-84393159 | None:intergenic | 20.0% |
| !! | TTTATTTGCGACATATAATT+TGG | + | chr4.3:84392757-84392776 | None:intergenic | 20.0% |
| !!! | AAGAACATACTTTCATTTTT+TGG | - | chr4.3:84390990-84391009 | MS.gene24932:intron | 20.0% |
| !!! | ATGTATTTGATTTGATTTTC+AGG | - | chr4.3:84392446-84392465 | MS.gene24932:intron | 20.0% |
| !!! | ATTTGATGGATTTTTTATTG+AGG | - | chr4.3:84390491-84390510 | MS.gene24932:intron | 20.0% |
| !!! | CAACAATATGTTATTTACAT+CGG | + | chr4.3:84392175-84392194 | None:intergenic | 20.0% |
| !!! | CATTGATTGAAAAAAGAAAA+GGG | - | chr4.3:84390419-84390438 | MS.gene24932:intron | 20.0% |
| !!! | GAAAACTAAAATCTAAGATT+TGG | + | chr4.3:84390772-84390791 | None:intergenic | 20.0% |
| !!! | GATATGTTTTTATTTGTACT+TGG | - | chr4.3:84391759-84391778 | MS.gene24932:CDS | 20.0% |
| !!! | TCATTGATTGAAAAAAGAAA+AGG | - | chr4.3:84390418-84390437 | MS.gene24932:intron | 20.0% |
| !!! | TGTTAAAAGAAACATTTTTC+AGG | - | chr4.3:84390563-84390582 | MS.gene24932:intron | 20.0% |
| !!! | TTGATGATTAAATTCAAAAC+TGG | + | chr4.3:84390383-84390402 | None:intergenic | 20.0% |
| !!! | TTTGATGGATTTTTTATTGA+GGG | - | chr4.3:84390492-84390511 | MS.gene24932:intron | 20.0% |
| !!! | TTTTGTATATTACTTCTATC+TGG | - | chr4.3:84391640-84391659 | MS.gene24932:intron | 20.0% |
| !!! | TTTTTGTTTATAAATGTGAC+CGG | - | chr4.3:84392694-84392713 | MS.gene24932:intron | 20.0% |
| ! | AAATGAGAGATTTACTTCAT+AGG | - | chr4.3:84393026-84393045 | MS.gene24932:intron | 25.0% |
| ! | AATCTTGAATTATTCTAGGT+TGG | - | chr4.3:84393443-84393462 | MS.gene24932:intron | 25.0% |
| ! | AATGAGAGATTTACTTCATA+GGG | - | chr4.3:84393027-84393046 | MS.gene24932:intron | 25.0% |
| ! | AATGAGTAAATATGAACCTT+TGG | + | chr4.3:84393216-84393235 | None:intergenic | 25.0% |
| ! | ATATGAAGAAATCTAAGAGT+TGG | + | chr4.3:84390637-84390656 | None:intergenic | 25.0% |
| ! | CATTGAATAGTTAATGTATC+TGG | - | chr4.3:84392620-84392639 | MS.gene24932:intron | 25.0% |
| ! | CTTGAATCTTGAATTATTCT+AGG | - | chr4.3:84393439-84393458 | MS.gene24932:intron | 25.0% |
| ! | TGACATTTACATCATAAACA+AGG | + | chr4.3:84392295-84392314 | None:intergenic | 25.0% |
| ! | TGATATTCTCATTAATGGTT+GGG | - | chr4.3:84393145-84393164 | MS.gene24932:intron | 25.0% |
| ! | TGATTTCACAACAAATAACT+AGG | + | chr4.3:84391964-84391983 | None:intergenic | 25.0% |
| ! | TTATGCATGTCATTATTCAT+TGG | - | chr4.3:84392989-84393008 | MS.gene24932:intron | 25.0% |
| ! | TTGATATTCTCATTAATGGT+TGG | - | chr4.3:84393144-84393163 | MS.gene24932:intron | 25.0% |
| ! | TTGTTAAAAGTCATTATCCT+CGG | - | chr4.3:84390302-84390321 | MS.gene24932:CDS | 25.0% |
| ! | TTTCAATTTCTTACTTCCAA+AGG | - | chr4.3:84393197-84393216 | MS.gene24932:intron | 25.0% |
| !! | AAATTCGAAACATTGTTTTC+CGG | - | chr4.3:84391227-84391246 | MS.gene24932:intron | 25.0% |
| !! | AACATTAAATCCTTCTTTTG+CGG | + | chr4.3:84392884-84392903 | None:intergenic | 25.0% |
| !! | ATTTGATAACCATGATCAAA+AGG | - | chr4.3:84393617-84393636 | MS.gene24932:intron | 25.0% |
| !! | TAAGCAAAAAACAGCTTTTT+AGG | - | chr4.3:84392595-84392614 | MS.gene24932:intron | 25.0% |
| !! | TAATGACTTTTAACAACATG+CGG | + | chr4.3:84390298-84390317 | None:intergenic | 25.0% |
| !! | TGATTTTCTCATCAATTGTT+TGG | + | chr4.3:84393066-84393085 | None:intergenic | 25.0% |
| !!! | ATTTTTCAGGTGATGAAAAA+TGG | - | chr4.3:84390576-84390595 | MS.gene24932:intron | 25.0% |
| !!! | TGATACCAACCTTTTTTTTT+TGG | - | chr4.3:84393371-84393390 | MS.gene24932:intron | 25.0% |
| !!! | TTGATGGATTTTTTATTGAG+GGG | - | chr4.3:84390493-84390512 | MS.gene24932:intron | 25.0% |
| AAAACTCACATTTCTTCTTC+AGG | + | chr4.3:84392952-84392971 | None:intergenic | 30.0% | |
| AAAGTATGTCTTCCAATTCA+TGG | - | chr4.3:84393583-84393602 | MS.gene24932:intron | 30.0% | |
| AACTCTGTACTTTGAGTATT+TGG | - | chr4.3:84391327-84391346 | MS.gene24932:intron | 30.0% | |
| AAGTACAGAGTTTATGAGAT+AGG | + | chr4.3:84391319-84391338 | None:intergenic | 30.0% | |
| AGTACAGAGTTTATGAGATA+GGG | + | chr4.3:84391318-84391337 | None:intergenic | 30.0% | |
| CACTAAATTTGAGAATATCC+TGG | + | chr4.3:84392113-84392132 | None:intergenic | 30.0% | |
| CACTAGAAATTTGTATCGAA+TGG | + | chr4.3:84393304-84393323 | None:intergenic | 30.0% | |
| CTAATTGTACACACAGATTT+GGG | - | chr4.3:84392202-84392221 | MS.gene24932:intron | 30.0% | |
| GAAGTTTAGTAATCAGTACA+AGG | - | chr4.3:84390891-84390910 | MS.gene24932:intron | 30.0% | |
| GTCAATTAGCAAATATAGCT+TGG | + | chr4.3:84390690-84390709 | None:intergenic | 30.0% | |
| TAACAGATTATCGTCAAAGT+TGG | - | chr4.3:84391890-84391909 | MS.gene24932:intron | 30.0% | |
| TATTTGTTCCGTTTGCATTT+AGG | - | chr4.3:84390857-84390876 | MS.gene24932:intron | 30.0% | |
| TCTAATTGTACACACAGATT+TGG | - | chr4.3:84392201-84392220 | MS.gene24932:intron | 30.0% | |
| TGACATGCATAAAGAAAACA+CGG | + | chr4.3:84392981-84393000 | None:intergenic | 30.0% | |
| TGTTTCCCAATACAACAAAT+GGG | + | chr4.3:84392497-84392516 | None:intergenic | 30.0% | |
| TTCACATACCTAAATGCAAA+CGG | + | chr4.3:84390868-84390887 | None:intergenic | 30.0% | |
| TTGCATTTAGGTATGTGAAT+CGG | - | chr4.3:84390869-84390888 | MS.gene24932:intron | 30.0% | |
| TTGTTTCCCAATACAACAAA+TGG | + | chr4.3:84392498-84392517 | None:intergenic | 30.0% | |
| ! | GTATTACTATCTTCTTTTGC+AGG | - | chr4.3:84392795-84392814 | MS.gene24932:intron | 30.0% |
| ! | TTGGTTAATTTTGTTCAGCA+AGG | - | chr4.3:84393390-84393409 | MS.gene24932:intron | 30.0% |
| !! | AAACTTCCCATTTGTTGTAT+TGG | - | chr4.3:84392488-84392507 | MS.gene24932:intron | 30.0% |
| !! | AACTTCCCATTTGTTGTATT+GGG | - | chr4.3:84392489-84392508 | MS.gene24932:intron | 30.0% |
| !! | ATGAAATCTCATTTTGAGTC+TGG | - | chr4.3:84393340-84393359 | MS.gene24932:intron | 30.0% |
| !! | CAATTGACTTGTTTGAAGTT+GGG | + | chr4.3:84391286-84391305 | None:intergenic | 30.0% |
| !! | TCAATTGACTTGTTTGAAGT+TGG | + | chr4.3:84391287-84391306 | None:intergenic | 30.0% |
| !! | TTGAATTATTCTAGGTTGGT+AGG | - | chr4.3:84393447-84393466 | MS.gene24932:intron | 30.0% |
| !! | TTTTTCAACTTCAGAAACTC+AGG | + | chr4.3:84391671-84391690 | None:intergenic | 30.0% |
| !!! | TTGAATTTATTTTGCAGGGT+TGG | - | chr4.3:84390719-84390738 | MS.gene24932:intron | 30.0% |
| AGGAAGTTCAATTTGAAGAC+AGG | - | chr4.3:84390941-84390960 | MS.gene24932:intron | 35.0% | |
| ATTCTTCTCTCCAATGGTTA+AGG | + | chr4.3:84392334-84392353 | None:intergenic | 35.0% | |
| GAAAGATCAGTGTGTATGTT+TGG | - | chr4.3:84392071-84392090 | MS.gene24932:intron | 35.0% | |
| GAGAGAAGAATTTCTCATTC+AGG | - | chr4.3:84392343-84392362 | MS.gene24932:intron | 35.0% | |
| GGAAACAAAATAGACGTTGA+TGG | - | chr4.3:84392510-84392529 | MS.gene24932:intron | 35.0% | |
| GGCATATGCATAACAAATCA+TGG | - | chr4.3:84393101-84393120 | MS.gene24932:CDS | 35.0% | |
| GTAACCAGAAACTCAAAGTA+CGG | + | chr4.3:84391467-84391486 | None:intergenic | 35.0% | |
| GTAATATACAAAACTGGACC+TGG | + | chr4.3:84391633-84391652 | None:intergenic | 35.0% | |
| GTACAGAGTTTATGAGATAG+GGG | + | chr4.3:84391317-84391336 | None:intergenic | 35.0% | |
| GTCTTCAAATTGAACTTCCT+TGG | + | chr4.3:84390941-84390960 | None:intergenic | 35.0% | |
| TAACCAGAAACTCAAAGTAC+GGG | + | chr4.3:84391466-84391485 | None:intergenic | 35.0% | |
| TCGAGATTCAAACCATGAAT+TGG | + | chr4.3:84393598-84393617 | None:intergenic | 35.0% | |
| TGAGAAATTCTTCTCTCCAA+TGG | + | chr4.3:84392340-84392359 | None:intergenic | 35.0% | |
| TGCTTATAAATGTGACCAGA+GGG | + | chr4.3:84392581-84392600 | None:intergenic | 35.0% | |
| TGTTTATAAATGTGACCGGA+GGG | - | chr4.3:84392698-84392717 | MS.gene24932:intron | 35.0% | |
| TTGCTTATAAATGTGACCAG+AGG | + | chr4.3:84392582-84392601 | None:intergenic | 35.0% | |
| TTGTTTATAAATGTGACCGG+AGG | - | chr4.3:84392697-84392716 | MS.gene24932:intron | 35.0% | |
| ! | AACAAAATAGACGTTGATGG+TGG | - | chr4.3:84392513-84392532 | MS.gene24932:intron | 35.0% |
| ! | ACAACAAATGGGAAGTTTTC+AGG | + | chr4.3:84392486-84392505 | None:intergenic | 35.0% |
| ! | ACATTGTTTTCCGGTCTTTT+CGG | - | chr4.3:84391236-84391255 | MS.gene24932:intron | 35.0% |
| ! | ATGAAACTCGAGTTGTAAAC+AGG | + | chr4.3:84391123-84391142 | None:intergenic | 35.0% |
| ! | CAACAAATGGGAAGTTTTCA+GGG | + | chr4.3:84392485-84392504 | None:intergenic | 35.0% |
| ! | TGGTGTTTGTTGATTATACC+AGG | - | chr4.3:84393648-84393667 | MS.gene24932:intron | 35.0% |
| !! | ACAAAATAGACGTTGATGGT+GGG | - | chr4.3:84392514-84392533 | MS.gene24932:intron | 35.0% |
| !! | ATGTCACTTTAATTTACCCG+TGG | + | chr4.3:84391148-84391167 | None:intergenic | 35.0% |
| !!! | CAGATTGTTTTAAACGGAAG+AGG | + | chr4.3:84391602-84391621 | None:intergenic | 35.0% |
| !!! | GTGCATTTTTTGCTATACAC+TGG | + | chr4.3:84392918-84392937 | None:intergenic | 35.0% |
| AACCAGAAACTCAAAGTACG+GGG | + | chr4.3:84391465-84391484 | None:intergenic | 40.0% | |
| AACTCGAGTTTCATTTCCAC+GGG | - | chr4.3:84391129-84391148 | MS.gene24932:CDS | 40.0% | |
| AATCAGTACAAGGCTACCAT+TGG | - | chr4.3:84390901-84390920 | MS.gene24932:intron | 40.0% | |
| ATGATAGTTGACGATGGTTG+TGG | - | chr4.3:84392027-84392046 | MS.gene24932:intron | 40.0% | |
| ATGATCAAAAGGCTCAAGTG+TGG | - | chr4.3:84393628-84393647 | MS.gene24932:intron | 40.0% | |
| CAACTCGAGTTTCATTTCCA+CGG | - | chr4.3:84391128-84391147 | MS.gene24932:CDS | 40.0% | |
| CAATATGCAATTACTCCCTC+CGG | + | chr4.3:84392716-84392735 | None:intergenic | 40.0% | |
| CTTTCGAGAACCTTAACCAT+TGG | - | chr4.3:84392321-84392340 | MS.gene24932:intron | 40.0% | |
| GAACATTCCTAGAGTTGTGA+TGG | + | chr4.3:84391385-84391404 | None:intergenic | 40.0% | |
| GAATGCATTTCCGAAAAGAC+CGG | + | chr4.3:84391249-84391268 | None:intergenic | 40.0% | |
| GAGTTGTAAACAGGCTCTTA+TGG | + | chr4.3:84391114-84391133 | None:intergenic | 40.0% | |
| GATTCAATCCTCAACGGAAA+TGG | - | chr4.3:84391569-84391588 | MS.gene24932:intron | 40.0% | |
| GGAACAAAACCATCCTTTCA+CGG | + | chr4.3:84391428-84391447 | None:intergenic | 40.0% | |
| GTAAGTTACTCCTCTTCCAA+TGG | - | chr4.3:84392549-84392568 | MS.gene24932:intron | 40.0% | |
| TCATTATCCTCGGTGATAGT+GGG | - | chr4.3:84390312-84390331 | MS.gene24932:CDS | 40.0% | |
| TTCCTAGAGTTGTGATGGTA+TGG | + | chr4.3:84391380-84391399 | None:intergenic | 40.0% | |
| TTGTGCATGATAGTTGACGA+TGG | - | chr4.3:84392021-84392040 | MS.gene24932:intron | 40.0% | |
| TTTGCGGATGTCTCAAAGTA+TGG | + | chr4.3:84392868-84392887 | None:intergenic | 40.0% | |
| ! | ACACTTGAGCCTTTTGATCA+TGG | + | chr4.3:84393629-84393648 | None:intergenic | 40.0% |
| ! | AGGATGGATTCAATCCTCAA+CGG | - | chr4.3:84391563-84391582 | MS.gene24932:intron | 40.0% |
| ! | CCGTTTAAAACAATCTGCTG+CGG | - | chr4.3:84391605-84391624 | MS.gene24932:intron | 40.0% |
| ! | GGTTTCTGAGAAGAAAGCAA+AGG | - | chr4.3:84392816-84392835 | MS.gene24932:intron | 40.0% |
| ! | TCAAAGTTGGCTCAAGTGAA+AGG | - | chr4.3:84391903-84391922 | MS.gene24932:intron | 40.0% |
| ! | TTTGAGACATCCGCAAAAGA+AGG | - | chr4.3:84392871-84392890 | MS.gene24932:intron | 40.0% |
| !!! | CCGCAGCAGATTGTTTTAAA+CGG | + | chr4.3:84391608-84391627 | None:intergenic | 40.0% |
| !!! | GGCTGTGTTTATTTTTTGCC+AGG | - | chr4.3:84392092-84392111 | MS.gene24932:intron | 40.0% |
| AGACAGGTTGTTCACATTGC+AGG | - | chr4.3:84390957-84390976 | MS.gene24932:intron | 45.0% | |
| AGCCATACCATCACAACTCT+AGG | - | chr4.3:84391375-84391394 | MS.gene24932:intron | 45.0% | |
| ATGGCTGACTAAATGCGAGT+AGG | + | chr4.3:84391361-84391380 | None:intergenic | 45.0% | |
| CTGAGAAGAAAGCAAAGGCA+TGG | - | chr4.3:84392821-84392840 | MS.gene24932:intron | 45.0% | |
| GATCAGAACCATTTCCGTTG+AGG | + | chr4.3:84391580-84391599 | None:intergenic | 45.0% | |
| GGATTGAATCCATCCTTTCG+CGG | + | chr4.3:84391559-84391578 | None:intergenic | 45.0% | |
| GGTGAGAAAATCAGCACCAA+TGG | + | chr4.3:84390920-84390939 | None:intergenic | 45.0% | |
| GTCATTATCCTCGGTGATAG+TGG | - | chr4.3:84390311-84390330 | MS.gene24932:CDS | 45.0% | |
| GTTAACCTCGACTGCTTTGA+CGG | - | chr4.3:84391834-84391853 | MS.gene24932:intron | 45.0% | |
| TTAACCTCGACTGCTTTGAC+GGG | - | chr4.3:84391835-84391854 | MS.gene24932:intron | 45.0% | |
| ! | AACCCCGTACTTTGAGTTTC+TGG | - | chr4.3:84391460-84391479 | MS.gene24932:intron | 45.0% |
| ! | ACACAGATTTGGGATACTGC+TGG | - | chr4.3:84392212-84392231 | MS.gene24932:intron | 45.0% |
| ! | ATTGCCGACATCGATTGTGT+CGG | + | chr4.3:84393681-84393700 | None:intergenic | 45.0% |
| !!! | TGGTGCTGATTTTCTCACCA+AGG | - | chr4.3:84390921-84390940 | MS.gene24932:intron | 45.0% |
| AAACAATCTGCTGCGGATCC+AGG | - | chr4.3:84391612-84391631 | MS.gene24932:intron | 50.0% | |
| AAGGCATGGTGTGCTTCGAA+GGG | - | chr4.3:84392835-84392854 | MS.gene24932:intron | 50.0% | |
| ACAATCGATGTCGGCAATGG+TGG | - | chr4.3:84393683-84393702 | MS.gene24932:intron | 50.0% | |
| CAAGAGCGGTTTCAGAGTCT+TGG | - | chr4.3:84392236-84392255 | MS.gene24932:intron | 50.0% | |
| GACACAATCGATGTCGGCAA+TGG | - | chr4.3:84393680-84393699 | MS.gene24932:intron | 50.0% | |
| GCTGACTAAATGCGAGTAGG+AGG | + | chr4.3:84391358-84391377 | None:intergenic | 50.0% | |
| TACATGTCGCCGTGAAAGGA+TGG | - | chr4.3:84391416-84391435 | MS.gene24932:intron | 50.0% | |
| TACGGGGTTTACGCGATTTC+AGG | + | chr4.3:84391449-84391468 | None:intergenic | 50.0% | |
| TCCTTTCACGGCGACATGTA+AGG | + | chr4.3:84391416-84391435 | None:intergenic | 50.0% | |
| TTCCAATGGCATACTCCCTC+TGG | - | chr4.3:84392563-84392582 | MS.gene24932:intron | 50.0% | |
| TTGAATCCATCCTTTCGCGG+CGG | + | chr4.3:84391556-84391575 | None:intergenic | 50.0% | |
| ! | AAAGGCATGGTGTGCTTCGA+AGG | - | chr4.3:84392834-84392853 | MS.gene24932:intron | 50.0% |
| ! | AGGGAGTATGCCATTGGAAG+AGG | + | chr4.3:84392562-84392581 | None:intergenic | 50.0% |
| ! | GTCTTGGTGTGGCTTTCTAC+CGG | - | chr4.3:84392252-84392271 | MS.gene24932:intron | 50.0% |
| ! | TCTTGGTGTGGCTTTCTACC+GGG | - | chr4.3:84392253-84392272 | MS.gene24932:intron | 50.0% |
| ! | TTCCTAGAGTTGTGATGGCG+TGG | + | chr4.3:84391509-84391528 | None:intergenic | 50.0% |
| ! | TTGCCGACATCGATTGTGTC+GGG | + | chr4.3:84393680-84393699 | None:intergenic | 50.0% |
| ! | TTTTCCCGTCAAAGCAGTCG+AGG | + | chr4.3:84391842-84391861 | None:intergenic | 50.0% |
| !! | GGGAAGTTTTCAGGGTCAGA+TGG | + | chr4.3:84392477-84392496 | None:intergenic | 50.0% |
| ACGGCGACATGTAAGGCAGA+AGG | + | chr4.3:84391409-84391428 | None:intergenic | 55.0% | |
| AGCCACGCCATCACAACTCT+AGG | - | chr4.3:84391504-84391523 | MS.gene24932:CDS | 55.0% | |
| CAGCATACCCACTATCACCG+AGG | + | chr4.3:84390322-84390341 | None:intergenic | 55.0% | |
| CTGCCCGACACAATCGATGT+CGG | - | chr4.3:84393674-84393693 | MS.gene24932:intron | 55.0% | |
| GATTGTGTCGGGCAGATACC+TGG | + | chr4.3:84393669-84393688 | None:intergenic | 55.0% | |
| GCCTTACATGTCGCCGTGAA+AGG | - | chr4.3:84391412-84391431 | MS.gene24932:intron | 55.0% | |
| GCGGTTTCAGAGTCTTGGTG+TGG | - | chr4.3:84392241-84392260 | MS.gene24932:intron | 55.0% | |
| GGACGACAACAGAGATCCAC+AGG | - | chr4.3:84393704-84393723 | MS.gene24932:CDS | 55.0% | |
| GGGATACTGCTGGTCAAGAG+CGG | - | chr4.3:84392222-84392241 | MS.gene24932:intron | 55.0% | |
| ! | CTTGGTGTGGCTTTCTACCG+GGG | - | chr4.3:84392254-84392273 | MS.gene24932:intron | 55.0% |
| ! | GACCAGAGGGAGTATGCCAT+TGG | + | chr4.3:84392568-84392587 | None:intergenic | 55.0% |
| ATCCTTTCGCGGCGGCGCAT+AGG | + | chr4.3:84391548-84391567 | None:intergenic | 65.0% | |
| GGACGCAGCAATCAGCACCC+CGG | + | chr4.3:84392274-84392293 | None:intergenic | 65.0% | |
| TATGCGCCGCCGCGAAAGGA+TGG | - | chr4.3:84391547-84391566 | MS.gene24932:intron | 65.0% | |
| TCCTTTCGCGGCGGCGCATA+GGG | + | chr4.3:84391547-84391566 | None:intergenic | 65.0% | |
| GGCGGCGCATAGGGCAGTGA+AGG | + | chr4.3:84391538-84391557 | None:intergenic | 70.0% | |
| GCCCTATGCGCCGCCGCGAA+AGG | - | chr4.3:84391543-84391562 | MS.gene24932:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 84390281 | 84393739 | 84390281 | ID=MS.gene24932 |
| chr4.3 | mRNA | 84390281 | 84393739 | 84390281 | ID=MS.gene24932.t1;Parent=MS.gene24932 |
| chr4.3 | exon | 84393687 | 84393739 | 84393687 | ID=MS.gene24932.t1.exon1;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84393687 | 84393739 | 84393687 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| chr4.3 | exon | 84393258 | 84393284 | 84393258 | ID=MS.gene24932.t1.exon2;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84393258 | 84393284 | 84393258 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| chr4.3 | exon | 84393042 | 84393141 | 84393042 | ID=MS.gene24932.t1.exon3;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84393042 | 84393141 | 84393042 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| chr4.3 | exon | 84391656 | 84391802 | 84391656 | ID=MS.gene24932.t1.exon4;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84391656 | 84391802 | 84391656 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| chr4.3 | exon | 84391472 | 84391552 | 84391472 | ID=MS.gene24932.t1.exon5;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84391472 | 84391552 | 84391472 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| chr4.3 | exon | 84391058 | 84391203 | 84391058 | ID=MS.gene24932.t1.exon6;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84391058 | 84391203 | 84391058 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| chr4.3 | exon | 84390281 | 84390350 | 84390281 | ID=MS.gene24932.t1.exon7;Parent=MS.gene24932.t1 |
| chr4.3 | CDS | 84390281 | 84390350 | 84390281 | ID=cds.MS.gene24932.t1;Parent=MS.gene24932.t1 |
| Gene Sequence |
| Protein sequence |
