Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009580.t1 | XP_003616145.1 | 100 | 187 | 0 | 0 | 1 | 187 | 14 | 200 | 9.90E-99 | 369.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009580.t1 | P31583 | 90.4 | 187 | 18 | 0 | 1 | 187 | 14 | 200 | 3.5e-92 | 339.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009580.t1 | G7KFR6 | 100.0 | 187 | 0 | 0 | 1 | 187 | 14 | 200 | 7.1e-99 | 369.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009580.t1 | MTR_5g076590 | 100.000 | 187 | 0 | 0 | 1 | 187 | 14 | 200 | 1.02e-139 | 387 |
MS.gene009580.t1 | MTR_3g064390 | 93.583 | 187 | 12 | 0 | 1 | 187 | 14 | 200 | 2.51e-133 | 371 |
MS.gene009580.t1 | MTR_8g103550 | 67.380 | 187 | 60 | 1 | 1 | 187 | 13 | 198 | 3.57e-94 | 272 |
MS.gene009580.t1 | MTR_2g102060 | 62.567 | 187 | 69 | 1 | 1 | 187 | 14 | 199 | 6.33e-87 | 254 |
MS.gene009580.t1 | MTR_3g064390 | 86.131 | 137 | 19 | 0 | 1 | 137 | 14 | 150 | 2.24e-84 | 246 |
MS.gene009580.t1 | MTR_1g094220 | 65.217 | 161 | 55 | 1 | 1 | 160 | 35 | 195 | 1.46e-75 | 225 |
MS.gene009580.t1 | MTR_1g094220 | 62.195 | 164 | 57 | 2 | 1 | 159 | 35 | 198 | 8.97e-71 | 213 |
MS.gene009580.t1 | MTR_1g094220 | 62.893 | 159 | 57 | 2 | 1 | 158 | 35 | 192 | 1.72e-69 | 211 |
MS.gene009580.t1 | MTR_1g094220 | 64.474 | 152 | 53 | 1 | 1 | 151 | 35 | 186 | 3.05e-69 | 209 |
MS.gene009580.t1 | MTR_8g031660 | 37.563 | 197 | 113 | 1 | 1 | 187 | 10 | 206 | 1.35e-49 | 159 |
MS.gene009580.t1 | MTR_6g021790 | 44.304 | 158 | 88 | 0 | 1 | 158 | 10 | 167 | 1.29e-48 | 157 |
MS.gene009580.t1 | MTR_4g064897 | 42.703 | 185 | 98 | 2 | 1 | 180 | 16 | 197 | 2.79e-48 | 156 |
MS.gene009580.t1 | MTR_3g087160 | 43.396 | 159 | 90 | 0 | 1 | 159 | 13 | 171 | 5.45e-48 | 155 |
MS.gene009580.t1 | MTR_8g089985 | 40.887 | 203 | 103 | 4 | 1 | 186 | 21 | 223 | 5.56e-48 | 156 |
MS.gene009580.t1 | MTR_3g069510 | 41.500 | 200 | 104 | 3 | 1 | 187 | 16 | 215 | 5.62e-48 | 155 |
MS.gene009580.t1 | MTR_4g079350 | 38.500 | 200 | 110 | 2 | 1 | 187 | 17 | 216 | 5.79e-48 | 155 |
MS.gene009580.t1 | MTR_8g090215 | 41.477 | 176 | 101 | 1 | 1 | 174 | 13 | 188 | 7.86e-48 | 155 |
MS.gene009580.t1 | MTR_4g088090 | 39.000 | 200 | 109 | 2 | 1 | 187 | 17 | 216 | 2.79e-47 | 154 |
MS.gene009580.t1 | MTR_2g014990 | 38.500 | 200 | 110 | 2 | 1 | 187 | 17 | 216 | 3.91e-47 | 154 |
MS.gene009580.t1 | MTR_8g031870 | 41.772 | 158 | 92 | 0 | 1 | 158 | 10 | 167 | 4.62e-47 | 152 |
MS.gene009580.t1 | MTR_2g075950 | 39.706 | 204 | 102 | 3 | 1 | 187 | 17 | 216 | 5.72e-47 | 153 |
MS.gene009580.t1 | MTR_6g079550 | 39.500 | 200 | 108 | 2 | 1 | 187 | 16 | 215 | 6.33e-47 | 153 |
MS.gene009580.t1 | MTR_2g005510 | 48.344 | 151 | 78 | 0 | 1 | 151 | 19 | 169 | 1.75e-46 | 152 |
MS.gene009580.t1 | MTR_3g086980 | 41.089 | 202 | 103 | 4 | 1 | 186 | 20 | 221 | 3.22e-46 | 151 |
MS.gene009580.t1 | MTR_8g031680 | 41.250 | 160 | 94 | 0 | 1 | 160 | 10 | 169 | 4.00e-46 | 150 |
MS.gene009580.t1 | MTR_2g027660 | 42.405 | 158 | 91 | 0 | 1 | 158 | 10 | 167 | 7.82e-46 | 150 |
MS.gene009580.t1 | MTR_2g083860 | 43.750 | 160 | 90 | 0 | 1 | 160 | 17 | 176 | 1.21e-45 | 150 |
MS.gene009580.t1 | MTR_5g013900 | 39.080 | 174 | 106 | 0 | 1 | 174 | 13 | 186 | 3.66e-45 | 148 |
MS.gene009580.t1 | MTR_8g027220 | 41.808 | 177 | 98 | 1 | 1 | 172 | 30 | 206 | 6.19e-45 | 148 |
MS.gene009580.t1 | MTR_7g081700 | 38.947 | 190 | 113 | 1 | 1 | 187 | 12 | 201 | 9.70e-45 | 147 |
MS.gene009580.t1 | MTR_8g036220 | 46.358 | 151 | 81 | 0 | 1 | 151 | 20 | 170 | 1.06e-44 | 148 |
MS.gene009580.t1 | MTR_1g078200 | 37.864 | 206 | 109 | 3 | 1 | 187 | 18 | 223 | 1.08e-44 | 147 |
MS.gene009580.t1 | MTR_8g031830 | 37.436 | 195 | 108 | 4 | 1 | 187 | 10 | 198 | 1.59e-44 | 146 |
MS.gene009580.t1 | MTR_4g098950 | 40.881 | 159 | 94 | 0 | 1 | 159 | 13 | 171 | 1.59e-44 | 147 |
MS.gene009580.t1 | MTR_0262s0050 | 37.811 | 201 | 110 | 2 | 1 | 186 | 19 | 219 | 5.18e-44 | 145 |
MS.gene009580.t1 | MTR_1g068730 | 37.056 | 197 | 112 | 4 | 1 | 186 | 19 | 214 | 1.09e-43 | 145 |
MS.gene009580.t1 | MTR_1g052475 | 40.678 | 177 | 97 | 1 | 1 | 169 | 19 | 195 | 1.47e-43 | 144 |
MS.gene009580.t1 | MTR_1g068740 | 37.056 | 197 | 112 | 4 | 1 | 186 | 19 | 214 | 2.48e-43 | 144 |
MS.gene009580.t1 | MTR_8g006970 | 39.378 | 193 | 109 | 3 | 1 | 187 | 26 | 216 | 3.97e-43 | 143 |
MS.gene009580.t1 | MTR_7g051940 | 37.931 | 203 | 106 | 4 | 1 | 187 | 17 | 215 | 9.33e-43 | 142 |
MS.gene009580.t1 | MTR_2g090865 | 41.772 | 158 | 92 | 0 | 1 | 158 | 15 | 172 | 1.77e-42 | 142 |
MS.gene009580.t1 | MTR_2g005500 | 40.237 | 169 | 100 | 1 | 1 | 169 | 13 | 180 | 2.78e-42 | 140 |
MS.gene009580.t1 | MTR_1g115325 | 37.755 | 196 | 112 | 4 | 1 | 186 | 19 | 214 | 4.25e-42 | 140 |
MS.gene009580.t1 | MTR_8g006970 | 43.226 | 155 | 88 | 0 | 1 | 155 | 12 | 166 | 2.42e-41 | 137 |
MS.gene009580.t1 | MTR_7g100020 | 40.373 | 161 | 95 | 1 | 1 | 160 | 19 | 179 | 4.83e-41 | 138 |
MS.gene009580.t1 | MTR_7g405790 | 34.653 | 202 | 117 | 2 | 1 | 187 | 19 | 220 | 8.76e-41 | 137 |
MS.gene009580.t1 | MTR_4g099470 | 40.351 | 171 | 95 | 3 | 22 | 187 | 9 | 177 | 4.39e-40 | 134 |
MS.gene009580.t1 | MTR_4g063160 | 36.041 | 197 | 115 | 4 | 1 | 186 | 19 | 215 | 2.31e-38 | 131 |
MS.gene009580.t1 | MTR_8g093740 | 38.342 | 193 | 111 | 5 | 1 | 186 | 17 | 208 | 5.91e-38 | 130 |
MS.gene009580.t1 | MTR_8g107070 | 45.455 | 154 | 84 | 0 | 1 | 154 | 18 | 171 | 1.36e-37 | 130 |
MS.gene009580.t1 | MTR_2g096550 | 32.990 | 194 | 122 | 4 | 1 | 186 | 19 | 212 | 2.06e-37 | 129 |
MS.gene009580.t1 | MTR_7g103070 | 37.755 | 196 | 112 | 4 | 1 | 187 | 20 | 214 | 2.22e-36 | 126 |
MS.gene009580.t1 | MTR_8g092020 | 35.938 | 192 | 116 | 4 | 1 | 185 | 16 | 207 | 8.17e-36 | 124 |
MS.gene009580.t1 | MTR_3g096350 | 36.788 | 193 | 114 | 5 | 1 | 186 | 16 | 207 | 1.14e-35 | 124 |
MS.gene009580.t1 | MTR_1g029450 | 37.436 | 195 | 113 | 6 | 1 | 187 | 21 | 214 | 2.22e-35 | 123 |
MS.gene009580.t1 | MTR_1g090717 | 36.923 | 195 | 114 | 5 | 1 | 187 | 19 | 212 | 2.49e-35 | 123 |
MS.gene009580.t1 | MTR_7g117910 | 39.416 | 137 | 83 | 0 | 1 | 137 | 24 | 160 | 4.00e-35 | 122 |
MS.gene009580.t1 | MTR_1g062760 | 37.949 | 195 | 110 | 5 | 1 | 186 | 18 | 210 | 4.99e-35 | 122 |
MS.gene009580.t1 | MTR_1g097420 | 39.264 | 163 | 92 | 3 | 1 | 156 | 12 | 174 | 7.90e-33 | 117 |
MS.gene009580.t1 | MTR_4g069850 | 38.037 | 163 | 94 | 3 | 1 | 156 | 12 | 174 | 1.04e-32 | 116 |
MS.gene009580.t1 | MTR_1g068730 | 38.400 | 125 | 77 | 0 | 1 | 125 | 19 | 143 | 2.24e-31 | 112 |
MS.gene009580.t1 | MTR_1g068740 | 38.400 | 125 | 77 | 0 | 1 | 125 | 19 | 143 | 3.56e-31 | 112 |
MS.gene009580.t1 | MTR_2g101890 | 35.465 | 172 | 104 | 3 | 1 | 165 | 14 | 185 | 8.36e-31 | 111 |
MS.gene009580.t1 | MTR_4g012940 | 35.465 | 172 | 104 | 3 | 1 | 165 | 12 | 183 | 1.65e-30 | 110 |
MS.gene009580.t1 | MTR_8g093740 | 37.349 | 166 | 97 | 4 | 28 | 186 | 10 | 175 | 3.82e-30 | 108 |
MS.gene009580.t1 | MTR_1g097420 | 38.710 | 155 | 88 | 3 | 9 | 156 | 47 | 201 | 1.68e-28 | 106 |
MS.gene009580.t1 | MTR_7g103070 | 37.975 | 158 | 88 | 4 | 39 | 187 | 2 | 158 | 1.99e-27 | 101 |
MS.gene009580.t1 | MTR_6g039490 | 34.969 | 163 | 99 | 4 | 1 | 156 | 12 | 174 | 2.64e-26 | 100 |
MS.gene009580.t1 | MTR_3g107713 | 32.164 | 171 | 110 | 4 | 1 | 168 | 17 | 184 | 2.40e-23 | 92.8 |
MS.gene009580.t1 | MTR_3g107707 | 32.164 | 171 | 110 | 4 | 1 | 168 | 17 | 184 | 2.45e-23 | 92.8 |
MS.gene009580.t1 | MTR_3g107717 | 32.164 | 171 | 110 | 4 | 1 | 168 | 17 | 184 | 2.53e-23 | 92.8 |
MS.gene009580.t1 | MTR_3g096350 | 39.130 | 115 | 67 | 3 | 1 | 113 | 16 | 129 | 1.90e-21 | 85.9 |
MS.gene009580.t1 | MTR_3g096350 | 39.130 | 115 | 67 | 3 | 1 | 113 | 16 | 129 | 4.52e-21 | 85.1 |
MS.gene009580.t1 | MTR_3g078260 | 32.121 | 165 | 94 | 6 | 1 | 151 | 12 | 172 | 1.39e-19 | 82.8 |
MS.gene009580.t1 | MTR_8g075240 | 31.902 | 163 | 97 | 4 | 1 | 151 | 10 | 170 | 2.71e-19 | 81.6 |
MS.gene009580.t1 | MTR_4g088055 | 30.061 | 163 | 100 | 4 | 1 | 151 | 10 | 170 | 6.11e-19 | 80.5 |
MS.gene009580.t1 | MTR_5g022600 | 31.288 | 163 | 98 | 4 | 1 | 151 | 10 | 170 | 1.42e-18 | 79.7 |
MS.gene009580.t1 | MTR_1452s0010 | 41.463 | 82 | 48 | 0 | 17 | 98 | 1 | 82 | 2.55e-18 | 76.6 |
MS.gene009580.t1 | MTR_4g113620 | 30.380 | 158 | 98 | 5 | 1 | 158 | 17 | 162 | 4.42e-18 | 78.6 |
MS.gene009580.t1 | MTR_6g087980 | 30.303 | 165 | 97 | 5 | 1 | 151 | 10 | 170 | 6.90e-18 | 78.2 |
MS.gene009580.t1 | MTR_4g073250 | 30.061 | 163 | 100 | 4 | 1 | 151 | 10 | 170 | 7.21e-18 | 77.8 |
MS.gene009580.t1 | MTR_2g090875 | 28.834 | 163 | 102 | 4 | 1 | 151 | 10 | 170 | 3.23e-17 | 75.9 |
MS.gene009580.t1 | MTR_1686s0010 | 39.241 | 79 | 48 | 0 | 17 | 95 | 1 | 79 | 1.31e-16 | 71.6 |
MS.gene009580.t1 | MTR_5g092060 | 30.488 | 164 | 104 | 4 | 2 | 158 | 109 | 269 | 1.69e-13 | 67.4 |
MS.gene009580.t1 | MTR_3g078260 | 33.333 | 114 | 69 | 4 | 1 | 111 | 12 | 121 | 1.82e-13 | 65.1 |
MS.gene009580.t1 | MTR_4g047870 | 30.488 | 164 | 104 | 4 | 2 | 158 | 96 | 256 | 6.38e-13 | 65.9 |
MS.gene009580.t1 | MTR_8g031810 | 27.551 | 98 | 57 | 1 | 1 | 98 | 10 | 93 | 6.94e-11 | 57.0 |
MS.gene009580.t1 | MTR_4g015360 | 67.568 | 37 | 12 | 0 | 123 | 159 | 21 | 57 | 9.34e-11 | 57.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009580.t1 | AT5G45130 | 81.283 | 187 | 35 | 0 | 1 | 187 | 14 | 200 | 6.07e-113 | 320 |
MS.gene009580.t1 | AT5G45130 | 81.283 | 187 | 35 | 0 | 1 | 187 | 22 | 208 | 1.93e-112 | 319 |
MS.gene009580.t1 | AT4G19640 | 79.679 | 187 | 38 | 0 | 1 | 187 | 14 | 200 | 4.00e-112 | 318 |
MS.gene009580.t1 | AT4G19640 | 86.614 | 127 | 17 | 0 | 1 | 127 | 14 | 140 | 1.07e-77 | 229 |
MS.gene009580.t1 | AT4G19640 | 84.496 | 129 | 20 | 0 | 1 | 129 | 14 | 142 | 1.40e-77 | 230 |
MS.gene009580.t1 | AT3G54840 | 63.030 | 165 | 60 | 1 | 1 | 164 | 3 | 167 | 8.83e-75 | 222 |
MS.gene009580.t1 | AT3G54840 | 63.030 | 165 | 60 | 1 | 1 | 164 | 37 | 201 | 9.37e-75 | 223 |
MS.gene009580.t1 | AT3G54840 | 63.816 | 152 | 54 | 1 | 1 | 151 | 37 | 188 | 1.36e-68 | 207 |
MS.gene009580.t1 | AT5G60860 | 39.000 | 200 | 109 | 2 | 1 | 187 | 17 | 216 | 7.22e-49 | 158 |
MS.gene009580.t1 | AT4G39990 | 38.725 | 204 | 106 | 4 | 1 | 187 | 21 | 222 | 1.17e-48 | 158 |
MS.gene009580.t1 | AT1G07410 | 41.919 | 198 | 104 | 3 | 1 | 187 | 16 | 213 | 1.31e-48 | 157 |
MS.gene009580.t1 | AT4G18800 | 39.086 | 197 | 110 | 2 | 1 | 187 | 17 | 213 | 2.21e-48 | 157 |
MS.gene009580.t1 | AT5G45750 | 38.693 | 199 | 110 | 2 | 1 | 187 | 17 | 215 | 5.17e-48 | 156 |
MS.gene009580.t1 | AT4G35860 | 44.304 | 158 | 88 | 0 | 1 | 158 | 10 | 167 | 1.11e-47 | 155 |
MS.gene009580.t1 | AT1G16920 | 40.704 | 199 | 106 | 2 | 1 | 187 | 17 | 215 | 1.63e-47 | 154 |
MS.gene009580.t1 | AT4G17160 | 44.516 | 155 | 86 | 0 | 1 | 155 | 10 | 164 | 2.54e-47 | 154 |
MS.gene009580.t1 | AT1G09630 | 46.875 | 160 | 85 | 0 | 1 | 160 | 16 | 175 | 3.52e-47 | 154 |
MS.gene009580.t1 | AT2G44610 | 44.025 | 159 | 89 | 0 | 1 | 159 | 13 | 171 | 4.98e-47 | 153 |
MS.gene009580.t1 | AT5G10260 | 42.767 | 159 | 91 | 0 | 1 | 159 | 13 | 171 | 5.75e-47 | 153 |
MS.gene009580.t1 | AT2G22290 | 38.144 | 194 | 113 | 2 | 1 | 187 | 13 | 206 | 1.00e-46 | 152 |
MS.gene009580.t1 | AT1G06400 | 39.698 | 199 | 108 | 2 | 1 | 187 | 17 | 215 | 1.58e-46 | 152 |
MS.gene009580.t1 | AT1G28550 | 43.125 | 160 | 91 | 0 | 1 | 160 | 17 | 176 | 2.42e-46 | 152 |
MS.gene009580.t1 | AT4G18430 | 37.500 | 200 | 112 | 2 | 1 | 187 | 17 | 216 | 2.51e-46 | 152 |
MS.gene009580.t1 | AT3G15060 | 43.750 | 160 | 90 | 0 | 1 | 160 | 17 | 176 | 3.02e-46 | 151 |
MS.gene009580.t1 | AT3G07410 | 41.294 | 201 | 104 | 3 | 1 | 187 | 16 | 216 | 3.91e-46 | 151 |
MS.gene009580.t1 | AT5G59150 | 41.176 | 204 | 100 | 4 | 1 | 187 | 16 | 216 | 6.10e-46 | 150 |
MS.gene009580.t1 | AT2G33870 | 43.750 | 160 | 90 | 0 | 1 | 160 | 17 | 176 | 6.85e-46 | 150 |
MS.gene009580.t1 | AT3G46830 | 40.196 | 204 | 103 | 3 | 1 | 187 | 16 | 217 | 1.17e-45 | 150 |
MS.gene009580.t1 | AT3G46830 | 40.196 | 204 | 103 | 3 | 1 | 187 | 16 | 217 | 1.17e-45 | 150 |
MS.gene009580.t1 | AT4G39890 | 41.875 | 160 | 92 | 1 | 1 | 159 | 13 | 172 | 2.20e-45 | 149 |
MS.gene009580.t1 | AT4G17530 | 39.583 | 192 | 109 | 3 | 1 | 187 | 12 | 201 | 2.98e-45 | 148 |
MS.gene009580.t1 | AT4G17170 | 41.772 | 158 | 92 | 0 | 1 | 158 | 10 | 167 | 3.36e-45 | 149 |
MS.gene009580.t1 | AT5G47520 | 37.438 | 203 | 111 | 4 | 1 | 187 | 18 | 220 | 4.37e-45 | 149 |
MS.gene009580.t1 | AT5G65270 | 42.405 | 158 | 91 | 0 | 1 | 158 | 21 | 178 | 6.59e-45 | 148 |
MS.gene009580.t1 | AT5G47200 | 39.474 | 190 | 112 | 1 | 1 | 187 | 12 | 201 | 9.21e-45 | 147 |
MS.gene009580.t1 | AT1G02130 | 39.896 | 193 | 108 | 3 | 1 | 187 | 12 | 202 | 1.08e-44 | 147 |
MS.gene009580.t1 | AT3G12160 | 43.750 | 160 | 90 | 0 | 1 | 160 | 19 | 178 | 2.90e-44 | 146 |
MS.gene009580.t1 | AT2G43130 | 38.384 | 198 | 111 | 2 | 1 | 187 | 16 | 213 | 3.38e-44 | 146 |
MS.gene009580.t1 | AT5G47960 | 41.566 | 166 | 97 | 0 | 1 | 166 | 19 | 184 | 3.84e-43 | 144 |
MS.gene009580.t1 | AT5G59840 | 37.879 | 198 | 109 | 4 | 1 | 186 | 19 | 214 | 5.85e-43 | 143 |
MS.gene009580.t1 | AT3G11730 | 36.458 | 192 | 115 | 1 | 1 | 185 | 12 | 203 | 1.54e-42 | 141 |
MS.gene009580.t1 | AT1G05810 | 36.816 | 201 | 113 | 3 | 1 | 187 | 16 | 216 | 2.08e-42 | 142 |
MS.gene009580.t1 | AT1G05810 | 36.816 | 201 | 113 | 3 | 1 | 187 | 62 | 262 | 3.98e-42 | 142 |
MS.gene009580.t1 | AT3G46060 | 36.869 | 198 | 111 | 4 | 1 | 186 | 19 | 214 | 7.13e-42 | 140 |
MS.gene009580.t1 | AT3G46060 | 36.869 | 198 | 111 | 4 | 1 | 186 | 19 | 214 | 7.13e-42 | 140 |
MS.gene009580.t1 | AT3G46060 | 36.869 | 198 | 111 | 4 | 1 | 186 | 19 | 214 | 7.13e-42 | 140 |
MS.gene009580.t1 | AT5G64990 | 41.139 | 158 | 93 | 0 | 1 | 158 | 11 | 168 | 1.41e-41 | 139 |
MS.gene009580.t1 | AT1G73640 | 45.033 | 151 | 83 | 0 | 1 | 151 | 17 | 167 | 1.61e-41 | 140 |
MS.gene009580.t1 | AT3G53610 | 35.821 | 201 | 109 | 4 | 1 | 186 | 19 | 214 | 2.42e-41 | 139 |
MS.gene009580.t1 | AT3G53610 | 35.821 | 201 | 109 | 4 | 1 | 186 | 19 | 214 | 2.42e-41 | 139 |
MS.gene009580.t1 | AT3G53610 | 35.821 | 201 | 109 | 4 | 1 | 186 | 19 | 214 | 2.42e-41 | 139 |
MS.gene009580.t1 | AT1G18200 | 42.405 | 158 | 91 | 0 | 1 | 158 | 17 | 174 | 7.69e-41 | 138 |
MS.gene009580.t1 | AT2G31680 | 35.644 | 202 | 115 | 3 | 1 | 187 | 16 | 217 | 1.32e-40 | 137 |
MS.gene009580.t1 | AT1G01200 | 42.138 | 159 | 91 | 1 | 1 | 158 | 32 | 190 | 1.40e-39 | 135 |
MS.gene009580.t1 | AT5G64990 | 39.394 | 165 | 93 | 1 | 1 | 158 | 11 | 175 | 8.26e-39 | 132 |
MS.gene009580.t1 | AT5G03520 | 37.755 | 196 | 113 | 4 | 1 | 187 | 19 | 214 | 1.20e-38 | 132 |
MS.gene009580.t1 | AT3G09900 | 36.364 | 198 | 115 | 3 | 1 | 187 | 19 | 216 | 2.73e-38 | 131 |
MS.gene009580.t1 | AT4G35860 | 46.667 | 120 | 64 | 0 | 39 | 158 | 2 | 121 | 2.44e-37 | 127 |
MS.gene009580.t1 | AT1G22740 | 39.877 | 163 | 91 | 3 | 1 | 156 | 12 | 174 | 7.45e-36 | 124 |
MS.gene009580.t1 | AT5G03530 | 38.776 | 196 | 109 | 6 | 1 | 187 | 17 | 210 | 1.43e-34 | 121 |
MS.gene009580.t1 | AT5G03530 | 38.776 | 196 | 109 | 6 | 1 | 187 | 17 | 210 | 1.43e-34 | 121 |
MS.gene009580.t1 | AT1G43890 | 40.625 | 160 | 92 | 3 | 1 | 158 | 17 | 175 | 1.65e-34 | 121 |
MS.gene009580.t1 | AT1G43890 | 40.625 | 160 | 92 | 3 | 1 | 158 | 17 | 175 | 1.65e-34 | 121 |
MS.gene009580.t1 | AT1G43890 | 40.625 | 160 | 92 | 3 | 1 | 158 | 17 | 175 | 1.65e-34 | 121 |
MS.gene009580.t1 | AT5G59150 | 40.361 | 166 | 79 | 4 | 39 | 187 | 3 | 165 | 4.42e-33 | 116 |
MS.gene009580.t1 | AT3G18820 | 37.423 | 163 | 95 | 3 | 1 | 156 | 12 | 174 | 1.38e-32 | 116 |
MS.gene009580.t1 | AT2G21880 | 38.272 | 162 | 93 | 3 | 1 | 155 | 13 | 174 | 1.68e-32 | 116 |
MS.gene009580.t1 | AT1G52280 | 35.632 | 174 | 105 | 3 | 1 | 167 | 12 | 185 | 1.93e-32 | 115 |
MS.gene009580.t1 | AT3G16100 | 36.047 | 172 | 103 | 3 | 1 | 165 | 12 | 183 | 1.28e-31 | 114 |
MS.gene009580.t1 | AT4G09720 | 39.264 | 163 | 92 | 3 | 1 | 156 | 12 | 174 | 1.90e-31 | 113 |
MS.gene009580.t1 | AT5G39620 | 37.195 | 164 | 96 | 3 | 1 | 157 | 9 | 172 | 2.13e-31 | 113 |
MS.gene009580.t1 | AT5G03520 | 36.196 | 163 | 95 | 4 | 34 | 187 | 42 | 204 | 6.55e-31 | 112 |
MS.gene009580.t1 | AT1G49300 | 37.037 | 162 | 95 | 3 | 1 | 155 | 12 | 173 | 1.96e-30 | 110 |
MS.gene009580.t1 | AT1G49300 | 37.037 | 162 | 95 | 3 | 1 | 155 | 12 | 173 | 1.96e-30 | 110 |
MS.gene009580.t1 | AT3G09910 | 35.979 | 189 | 118 | 3 | 1 | 187 | 17 | 204 | 5.91e-29 | 107 |
MS.gene009580.t1 | AT3G09910 | 35.979 | 189 | 118 | 3 | 1 | 187 | 17 | 204 | 5.91e-29 | 107 |
MS.gene009580.t1 | AT3G09910 | 35.979 | 189 | 118 | 3 | 1 | 187 | 17 | 204 | 5.91e-29 | 107 |
MS.gene009580.t1 | AT4G09720 | 38.095 | 168 | 92 | 4 | 1 | 156 | 12 | 179 | 7.22e-29 | 107 |
MS.gene009580.t1 | AT4G09720 | 36.782 | 174 | 92 | 4 | 1 | 156 | 12 | 185 | 6.42e-28 | 104 |
MS.gene009580.t1 | AT3G09910 | 39.506 | 162 | 95 | 3 | 1 | 160 | 17 | 177 | 2.89e-27 | 102 |
MS.gene009580.t1 | AT3G09910 | 39.506 | 162 | 95 | 3 | 1 | 160 | 17 | 177 | 2.89e-27 | 102 |
MS.gene009580.t1 | AT2G21880 | 36.735 | 147 | 86 | 3 | 16 | 155 | 3 | 149 | 6.49e-26 | 98.6 |
MS.gene009580.t1 | AT2G21880 | 36.735 | 147 | 86 | 3 | 16 | 155 | 3 | 149 | 6.49e-26 | 98.6 |
MS.gene009580.t1 | AT4G09720 | 39.416 | 137 | 76 | 3 | 27 | 156 | 4 | 140 | 1.25e-24 | 94.7 |
MS.gene009580.t1 | AT4G09720 | 39.416 | 137 | 76 | 3 | 27 | 156 | 4 | 140 | 1.25e-24 | 94.7 |
MS.gene009580.t1 | AT4G09720 | 39.416 | 137 | 76 | 3 | 27 | 156 | 4 | 140 | 1.25e-24 | 94.7 |
MS.gene009580.t1 | AT5G55080 | 29.747 | 158 | 108 | 3 | 1 | 158 | 17 | 171 | 5.95e-24 | 94.4 |
MS.gene009580.t1 | AT5G20010 | 32.911 | 158 | 103 | 3 | 1 | 158 | 17 | 171 | 5.21e-23 | 92.0 |
MS.gene009580.t1 | AT5G55190 | 32.911 | 158 | 103 | 3 | 1 | 158 | 17 | 171 | 5.32e-23 | 92.0 |
MS.gene009580.t1 | AT5G20020 | 32.911 | 158 | 103 | 3 | 1 | 158 | 17 | 171 | 5.67e-23 | 91.7 |
MS.gene009580.t1 | AT2G21880 | 33.333 | 162 | 93 | 4 | 1 | 155 | 13 | 166 | 1.08e-22 | 90.5 |
MS.gene009580.t1 | AT3G51300 | 31.902 | 163 | 97 | 4 | 1 | 151 | 10 | 170 | 1.07e-19 | 82.8 |
MS.gene009580.t1 | AT2G17800 | 32.515 | 163 | 96 | 4 | 1 | 151 | 10 | 170 | 1.87e-19 | 82.0 |
MS.gene009580.t1 | AT2G17800 | 32.515 | 163 | 96 | 4 | 1 | 151 | 10 | 170 | 1.87e-19 | 82.0 |
MS.gene009580.t1 | AT2G44690 | 32.738 | 168 | 99 | 5 | 1 | 156 | 22 | 187 | 1.90e-19 | 82.4 |
MS.gene009580.t1 | AT4G28950 | 31.288 | 163 | 96 | 5 | 1 | 151 | 10 | 168 | 2.84e-19 | 81.6 |
MS.gene009580.t1 | AT4G35950 | 32.515 | 163 | 96 | 5 | 1 | 151 | 10 | 170 | 6.96e-19 | 80.5 |
MS.gene009580.t1 | AT3G48040 | 29.697 | 165 | 98 | 5 | 1 | 151 | 12 | 172 | 2.77e-18 | 79.3 |
MS.gene009580.t1 | AT4G35020 | 31.902 | 163 | 97 | 5 | 1 | 151 | 10 | 170 | 4.02e-18 | 78.6 |
MS.gene009580.t1 | AT4G35020 | 31.902 | 163 | 97 | 5 | 1 | 151 | 10 | 170 | 4.02e-18 | 78.6 |
MS.gene009580.t1 | AT4G35020 | 31.902 | 163 | 97 | 5 | 1 | 151 | 10 | 170 | 4.02e-18 | 78.6 |
MS.gene009580.t1 | AT5G46025 | 38.710 | 93 | 56 | 1 | 67 | 158 | 14 | 106 | 8.38e-18 | 75.5 |
MS.gene009580.t1 | AT5G62880 | 31.515 | 165 | 95 | 6 | 1 | 151 | 12 | 172 | 9.05e-18 | 77.8 |
MS.gene009580.t1 | AT1G75840 | 30.675 | 163 | 99 | 5 | 1 | 151 | 10 | 170 | 1.48e-17 | 77.0 |
MS.gene009580.t1 | AT1G20090 | 30.675 | 163 | 99 | 5 | 1 | 151 | 9 | 169 | 2.25e-17 | 76.6 |
MS.gene009580.t1 | AT5G45970 | 29.448 | 163 | 101 | 4 | 1 | 151 | 10 | 170 | 3.68e-17 | 75.9 |
MS.gene009580.t1 | AT3G48040 | 29.299 | 157 | 93 | 5 | 1 | 143 | 12 | 164 | 3.06e-16 | 73.2 |
MS.gene009580.t1 | AT3G51290 | 34.109 | 129 | 72 | 3 | 35 | 151 | 644 | 771 | 8.14e-16 | 75.1 |
MS.gene009580.t1 | AT5G62880 | 31.210 | 157 | 90 | 6 | 1 | 143 | 12 | 164 | 9.68e-16 | 72.0 |
MS.gene009580.t1 | AT4G35020 | 32.143 | 112 | 73 | 3 | 1 | 111 | 10 | 119 | 3.00e-12 | 61.6 |
MS.gene009580.t1 | AT4G35020 | 32.143 | 112 | 73 | 3 | 1 | 111 | 10 | 119 | 3.00e-12 | 61.6 |
MS.gene009580.t1 | AT3G21700 | 29.091 | 165 | 106 | 5 | 2 | 158 | 111 | 272 | 3.75e-11 | 60.8 |
Find 44 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGTCAATTCCTTGAATTTC+AGG | 0.172043 | 5.3:+61815172 | MS.gene009580:CDS |
TCAGGTTCTTCTTGGTGATA+TGG | 0.216552 | 5.3:+61815112 | None:intergenic |
CCACAGTGAAATTTGAGATT+TGG | 0.262162 | 5.3:+61816750 | MS.gene009580:CDS |
TTGTGCCCTTGGTAACTTCT+TGG | 0.276630 | 5.3:-61819940 | None:intergenic |
ATTCAATTTCAGGTTCTTCT+TGG | 0.293743 | 5.3:+61815104 | None:intergenic |
CACAGTGAAATTTGAGATTT+GGG | 0.299158 | 5.3:+61816751 | MS.gene009580:CDS |
CGTCATTTACTGCCAACGTC+TGG | 0.316274 | 5.3:-61816727 | None:intergenic |
CAGGTTCTTCTTGGTGATAT+GGG | 0.343041 | 5.3:+61815113 | None:intergenic |
GTGAAACAGGAATCAACAAT+AGG | 0.375057 | 5.3:+61816689 | MS.gene009580:intron |
CATTTACACGAGCGAAGAAA+TGG | 0.391385 | 5.3:+61817082 | MS.gene009580:CDS |
CGTGTATATGCTGAGGAAAA+TGG | 0.414206 | 5.3:+61818958 | MS.gene009580:CDS |
GCAAAAGCCACGACCATGTT+CGG | 0.437301 | 5.3:-61817669 | None:intergenic |
TGAAACAGGAATCAACAATA+GGG | 0.443425 | 5.3:+61816690 | MS.gene009580:intron |
TACCTTGCTTCTGAAGCTCT+TGG | 0.443949 | 5.3:-61817107 | None:intergenic |
CAACCAGCGCAAAACCCAGC+AGG | 0.448579 | 5.3:+61819960 | MS.gene009580:CDS |
CTTCTTGGTGATATGGGTGC+TGG | 0.450654 | 5.3:+61815119 | MS.gene009580:CDS |
GCAGCTCTGGTTCCTTCGGC+AGG | 0.470619 | 5.3:-61820002 | None:intergenic |
TGTCTATGATATTACTAACT+TGG | 0.471350 | 5.3:+61816844 | MS.gene009580:CDS |
TGCTGGTAACAAAGCTGACT+TGG | 0.472663 | 5.3:+61817689 | MS.gene009580:CDS |
ATAAAATATGTCATTAACAT+TGG | 0.476631 | 5.3:-61819016 | None:intergenic |
TCAACAAGAACCATCCCTGC+TGG | 0.485332 | 5.3:-61819975 | None:intergenic |
TGAACAACATGATGCAGCTC+TGG | 0.499235 | 5.3:-61820015 | None:intergenic |
AAGCTGACTTGGAAGATAAG+AGG | 0.510951 | 5.3:+61817700 | MS.gene009580:CDS |
TGATGCAGCTCTGGTTCCTT+CGG | 0.524363 | 5.3:-61820006 | None:intergenic |
GTCATTTACTGCCAACGTCT+GGG | 0.532033 | 5.3:-61816726 | None:intergenic |
TTAGCTCCCATGTACTATAG+AGG | 0.537219 | 5.3:+61816803 | MS.gene009580:CDS |
TTTGAGATTTGGGACACAGC+AGG | 0.538081 | 5.3:+61816761 | MS.gene009580:CDS |
AGCGCAAAACCCAGCAGGGA+TGG | 0.543975 | 5.3:+61819965 | MS.gene009580:CDS |
ATTTACACGAGCGAAGAAAT+GGG | 0.562436 | 5.3:+61817083 | MS.gene009580:CDS |
AGCAGCGCCTCTATAGTACA+TGG | 0.565513 | 5.3:-61816810 | None:intergenic |
CAACAAGAACCATCCCTGCT+GGG | 0.567898 | 5.3:-61819974 | None:intergenic |
AGGGAATCCGAACATGGTCG+TGG | 0.578957 | 5.3:+61817662 | MS.gene009580:intron |
TGTTGCAGGGAATCCGAACA+TGG | 0.580245 | 5.3:+61817656 | MS.gene009580:intron |
AACCAGCGCAAAACCCAGCA+GGG | 0.586823 | 5.3:+61819961 | MS.gene009580:CDS |
CCTTAACAAAACGCAAAACA+AGG | 0.590364 | 5.3:-61815151 | None:intergenic |
AGTACATGGGAGCTAAGCTA+TGG | 0.598496 | 5.3:-61816796 | None:intergenic |
GTCCAAGAGCTTCAGAAGCA+AGG | 0.599811 | 5.3:+61817105 | MS.gene009580:CDS |
CTTGTTGATAGACCTGCCGA+AGG | 0.652869 | 5.3:+61819990 | MS.gene009580:CDS |
GGAAGCACGTGTATATGCTG+AGG | 0.658380 | 5.3:+61818951 | MS.gene009580:intron |
GAAACAGGAATCAACAATAG+GGG | 0.660375 | 5.3:+61816691 | MS.gene009580:intron |
GAACAGCCAAGAAGTTACCA+AGG | 0.663916 | 5.3:+61819934 | MS.gene009580:intron |
AACAGCCAAGAAGTTACCAA+GGG | 0.689870 | 5.3:+61819935 | MS.gene009580:intron |
GCAGCGCCTCTATAGTACAT+GGG | 0.698335 | 5.3:-61816809 | None:intergenic |
CCAAATCTCAAATTTCACTG+TGG | 0.747675 | 5.3:-61816750 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTAAAAGATAAATCAAA+AGG | - | chr5.3:61815206-61815225 | None:intergenic | 10.0% |
!!! | AAAAATTTTAGATTGTAAAA+AGG | + | chr5.3:61817184-61817203 | MS.gene009580:intron | 10.0% |
!!! | ATTTATCTTTTAAATTCAAT+TGG | + | chr5.3:61815210-61815229 | MS.gene009580:intron | 10.0% |
!!! | TTTATCTTTTAAATTCAATT+GGG | + | chr5.3:61815211-61815230 | MS.gene009580:intron | 10.0% |
!! | AAACAATAGCTAAAAAATTT+CGG | - | chr5.3:61817532-61817551 | None:intergenic | 15.0% |
!! | ATAAAATATGTCATTAACAT+TGG | - | chr5.3:61819019-61819038 | None:intergenic | 15.0% |
!! | ATCTTATATTATAGAATGTA+TGG | + | chr5.3:61815576-61815595 | MS.gene009580:intron | 15.0% |
!! | ATGATATTTAAGTGTAATAA+TGG | + | chr5.3:61819790-61819809 | MS.gene009580:intron | 15.0% |
!! | ATTAATATATGAATTGTGAA+CGG | + | chr5.3:61817416-61817435 | MS.gene009580:intron | 15.0% |
!! | TAAGAAGAAATATTAGAATA+TGG | - | chr5.3:61817273-61817292 | None:intergenic | 15.0% |
!! | TATGTTAATTTATTTGTAGA+CGG | - | chr5.3:61816068-61816087 | None:intergenic | 15.0% |
!! | TTATATATAGTTTATTACTG+TGG | + | chr5.3:61817019-61817038 | MS.gene009580:intron | 15.0% |
!!! | AAGAAGAAACAATTTTATTT+AGG | - | chr5.3:61815729-61815748 | None:intergenic | 15.0% |
!!! | AATGACATATTTTATGAAAT+AGG | + | chr5.3:61819024-61819043 | MS.gene009580:CDS | 15.0% |
!!! | TTTTTGACTAAATTGAAATT+GGG | + | chr5.3:61815360-61815379 | MS.gene009580:intron | 15.0% |
!! | AAATTCATTCACACAAATAA+TGG | + | chr5.3:61819823-61819842 | MS.gene009580:intron | 20.0% |
!! | TATAGTTTCTTCAACTATAT+TGG | + | chr5.3:61817789-61817808 | MS.gene009580:intron | 20.0% |
!! | TGTAGAATTCAAAATTTATG+AGG | + | chr5.3:61815238-61815257 | MS.gene009580:intron | 20.0% |
!! | TTATATTATAGAATGTATGG+TGG | + | chr5.3:61815579-61815598 | MS.gene009580:intron | 20.0% |
!! | TTTACTTAAAAGTTCAAACT+GGG | + | chr5.3:61816227-61816246 | MS.gene009580:intron | 20.0% |
!!! | CATAGCATGTTATATTTTTT+GGG | + | chr5.3:61816160-61816179 | MS.gene009580:intron | 20.0% |
!!! | GAAAACTGAACTATTTATTT+TGG | + | chr5.3:61817206-61817225 | MS.gene009580:intron | 20.0% |
!!! | GTTTTTGACTAAATTGAAAT+TGG | + | chr5.3:61815359-61815378 | MS.gene009580:intron | 20.0% |
!!! | TAAGATGGTATTTTCAAATT+TGG | + | chr5.3:61819766-61819785 | MS.gene009580:intron | 20.0% |
!!! | TATTTTGTATATAGTAGTGT+GGG | + | chr5.3:61816564-61816583 | MS.gene009580:intron | 20.0% |
!!! | TCATAGCATGTTATATTTTT+TGG | + | chr5.3:61816159-61816178 | MS.gene009580:intron | 20.0% |
!!! | TCCTATATTTTTTACATTAG+CGG | + | chr5.3:61816106-61816125 | MS.gene009580:intron | 20.0% |
!!! | TCTTATTCTTACATTTTTTC+TGG | + | chr5.3:61817153-61817172 | MS.gene009580:intron | 20.0% |
!!! | TTATTTTGTATATAGTAGTG+TGG | + | chr5.3:61816563-61816582 | MS.gene009580:intron | 20.0% |
!!! | TTTTGACTAAATTGAAATTG+GGG | + | chr5.3:61815361-61815380 | MS.gene009580:intron | 20.0% |
! | AACTAACCCATGATATTTAA+TGG | + | chr5.3:61817503-61817522 | MS.gene009580:intron | 25.0% |
! | AAGAGCTTCTTAAGAAATTA+AGG | + | chr5.3:61818343-61818362 | MS.gene009580:intron | 25.0% |
! | AATTTAGCAGAAAAAATGTG+TGG | - | chr5.3:61817836-61817855 | None:intergenic | 25.0% |
! | ACATAATTTATATCAGTCCA+AGG | + | chr5.3:61819151-61819170 | MS.gene009580:intron | 25.0% |
! | ACCGCTAATGTAAAAAATAT+AGG | - | chr5.3:61816110-61816129 | None:intergenic | 25.0% |
! | AGTCAATCTGTTTAAAGAAT+TGG | - | chr5.3:61816633-61816652 | None:intergenic | 25.0% |
! | ATAAACTCCTTGAATAAAGT+GGG | + | chr5.3:61818563-61818582 | MS.gene009580:intron | 25.0% |
! | ATTGTACTCTCAATATAAGA+TGG | + | chr5.3:61819751-61819770 | MS.gene009580:intron | 25.0% |
! | ATTGTACTTCAAAGTTATAG+TGG | + | chr5.3:61817588-61817607 | MS.gene009580:intron | 25.0% |
! | CAATAAATAACAACAGATCT+CGG | - | chr5.3:61816610-61816629 | None:intergenic | 25.0% |
! | CTAAAATAATGAACTCATTC+TGG | + | chr5.3:61817630-61817649 | MS.gene009580:intron | 25.0% |
! | CTTTACTTAAAAGTTCAAAC+TGG | + | chr5.3:61816226-61816245 | MS.gene009580:intron | 25.0% |
! | GAAAAAAAACCTGAAATTCA+AGG | - | chr5.3:61815184-61815203 | None:intergenic | 25.0% |
! | GCAACTGTTTAAATACATAT+AGG | - | chr5.3:61818851-61818870 | None:intergenic | 25.0% |
! | GCATAAGAATAAATCATACA+AGG | + | chr5.3:61819124-61819143 | MS.gene009580:intron | 25.0% |
! | GGTTAGATAAATGTACATAA+AGG | + | chr5.3:61819242-61819261 | MS.gene009580:intron | 25.0% |
! | TAAAGTGTATGTAATAGGAA+AGG | - | chr5.3:61819057-61819076 | None:intergenic | 25.0% |
! | TATAAACTCCTTGAATAAAG+TGG | + | chr5.3:61818562-61818581 | MS.gene009580:intron | 25.0% |
! | TGAGAAATGTTGTTCAATTA+GGG | + | chr5.3:61815882-61815901 | MS.gene009580:intron | 25.0% |
! | TGAGTTATCAAACATTCATT+TGG | + | chr5.3:61816260-61816279 | MS.gene009580:intron | 25.0% |
! | TGTCTATGATATTACTAACT+TGG | + | chr5.3:61816844-61816863 | MS.gene009580:CDS | 25.0% |
! | TTATAAGAGAAGCTATTAGT+TGG | + | chr5.3:61818385-61818404 | MS.gene009580:intron | 25.0% |
! | TTGAGAAATGTTGTTCAATT+AGG | + | chr5.3:61815881-61815900 | MS.gene009580:intron | 25.0% |
! | TTTCCTATTACATACACTTT+AGG | + | chr5.3:61819056-61819075 | MS.gene009580:intron | 25.0% |
!! | AGAATGAATTGTTATGGTTT+TGG | + | chr5.3:61815483-61815502 | MS.gene009580:intron | 25.0% |
!! | GAATTTTATTATTCCTAGTC+TGG | + | chr5.3:61819280-61819299 | MS.gene009580:intron | 25.0% |
!! | TAGTCTTAAGTAAGAGAAAA+TGG | + | chr5.3:61819717-61819736 | MS.gene009580:intron | 25.0% |
!! | TGCAAACAACACAAATATTT+TGG | - | chr5.3:61819217-61819236 | None:intergenic | 25.0% |
!! | TGCTAAATTTTCAAATACCA+GGG | + | chr5.3:61817847-61817866 | MS.gene009580:intron | 25.0% |
!!! | TTTTTTAAATACATCGAGAG+AGG | - | chr5.3:61819861-61819880 | None:intergenic | 25.0% |
AAATTAACGCAAAGTTCAGT+AGG | - | chr5.3:61817481-61817500 | None:intergenic | 30.0% | |
AAGTACAATTACAACCAGAA+TGG | - | chr5.3:61817577-61817596 | None:intergenic | 30.0% | |
AATATAGCATAGCACAAACA+TGG | + | chr5.3:61817361-61817380 | MS.gene009580:intron | 30.0% | |
ACTGCTTTGCTGAATTTATT+TGG | + | chr5.3:61816660-61816679 | MS.gene009580:intron | 30.0% | |
AGAAATGTTGTTCAATTAGG+GGG | + | chr5.3:61815884-61815903 | MS.gene009580:intron | 30.0% | |
AGTACAATTACAACCAGAAT+GGG | - | chr5.3:61817576-61817595 | None:intergenic | 30.0% | |
AGTTCTATTCTGAACATGAT+AGG | + | chr5.3:61815451-61815470 | MS.gene009580:intron | 30.0% | |
ATATAACATGCTATGAAGCA+TGG | - | chr5.3:61816155-61816174 | None:intergenic | 30.0% | |
ATTCACCTAACCAAGTTATT+TGG | + | chr5.3:61816321-61816340 | MS.gene009580:intron | 30.0% | |
ATTTATGAGGACAATTTCCA+TGG | + | chr5.3:61815251-61815270 | MS.gene009580:intron | 30.0% | |
CAACCTAAAGTGTATGTAAT+AGG | - | chr5.3:61819062-61819081 | None:intergenic | 30.0% | |
CAACTTTAACCCAAATAACT+TGG | - | chr5.3:61816334-61816353 | None:intergenic | 30.0% | |
CATAAAAAAACACATTCGTC+TGG | - | chr5.3:61819361-61819380 | None:intergenic | 30.0% | |
CGGTAACCATTAAATATCAT+GGG | - | chr5.3:61817512-61817531 | None:intergenic | 30.0% | |
CTCGATTACAAAATCATAAC+AGG | - | chr5.3:61815391-61815410 | None:intergenic | 30.0% | |
GAGAAATGTTGTTCAATTAG+GGG | + | chr5.3:61815883-61815902 | MS.gene009580:intron | 30.0% | |
GCCAAAAAAAATTTATCTCC+CGG | + | chr5.3:61816424-61816443 | MS.gene009580:intron | 30.0% | |
GTTGTGAGAATGAATTGTTA+TGG | + | chr5.3:61815477-61815496 | MS.gene009580:intron | 30.0% | |
TAACATATATGTAGCAGTGT+CGG | + | chr5.3:61816081-61816100 | MS.gene009580:intron | 30.0% | |
TATATGAATTGTGAACGGTT+AGG | + | chr5.3:61817421-61817440 | MS.gene009580:intron | 30.0% | |
TATTTGGTCTATTGTGAAAC+AGG | + | chr5.3:61816676-61816695 | MS.gene009580:intron | 30.0% | |
TCGGTAACCATTAAATATCA+TGG | - | chr5.3:61817513-61817532 | None:intergenic | 30.0% | |
TGAAACAGGAATCAACAATA+GGG | + | chr5.3:61816690-61816709 | MS.gene009580:intron | 30.0% | |
TTAAAGTTGTTCATGAACTC+CGG | + | chr5.3:61816345-61816364 | MS.gene009580:intron | 30.0% | |
TTAACCCAAATAACTTGGTT+AGG | - | chr5.3:61816329-61816348 | None:intergenic | 30.0% | |
TTCAATGTACAAGCTAAAGT+TGG | - | chr5.3:61818708-61818727 | None:intergenic | 30.0% | |
TTCACCTAACCAAGTTATTT+GGG | + | chr5.3:61816322-61816341 | MS.gene009580:intron | 30.0% | |
TTTATGAGGACAATTTCCAT+GGG | + | chr5.3:61815252-61815271 | MS.gene009580:intron | 30.0% | |
TTTCCTATACCTGTTACAAA+AGG | + | chr5.3:61817549-61817568 | MS.gene009580:intron | 30.0% | |
! | AAATGGAAACTCTTCTTTTG+AGG | + | chr5.3:61819186-61819205 | MS.gene009580:intron | 30.0% |
! | AAATTTTCAAATACCAGGGA+TGG | + | chr5.3:61817851-61817870 | MS.gene009580:intron | 30.0% |
! | AGCTTATGCGATTTTCATTT+TGG | - | chr5.3:61818656-61818675 | None:intergenic | 30.0% |
! | CACAGTGAAATTTGAGATTT+GGG | + | chr5.3:61816751-61816770 | MS.gene009580:CDS | 30.0% |
! | CTGCTAAATTTTCAAATACC+AGG | + | chr5.3:61817846-61817865 | MS.gene009580:intron | 30.0% |
! | TGATTATTTCTTCTGTTCAC+AGG | + | chr5.3:61817056-61817075 | MS.gene009580:intron | 30.0% |
!! | CATGTTGATAGTTCTACTAT+CGG | + | chr5.3:61818503-61818522 | MS.gene009580:intron | 30.0% |
!! | CTTTAAACAGATTGACTTGT+GGG | + | chr5.3:61816636-61816655 | MS.gene009580:intron | 30.0% |
!! | TCTTTAAACAGATTGACTTG+TGG | + | chr5.3:61816635-61816654 | MS.gene009580:intron | 30.0% |
!!! | ACCGGGAGATAAATTTTTTT+TGG | - | chr5.3:61816428-61816447 | None:intergenic | 30.0% |
!!! | ATGAATTGTTATGGTTTTGG+AGG | + | chr5.3:61815486-61815505 | MS.gene009580:intron | 30.0% |
!!! | CTTGTTTTGCGTTTTGTTAA+GGG | + | chr5.3:61815152-61815171 | MS.gene009580:CDS | 30.0% |
!!! | GCATGTTATATTTTTTGGGT+TGG | + | chr5.3:61816164-61816183 | MS.gene009580:intron | 30.0% |
!!! | GTGTCATTTTCCTTTCTTTA+GGG | + | chr5.3:61816949-61816968 | MS.gene009580:intron | 30.0% |
!!! | TGTGTCATTTTCCTTTCTTT+AGG | + | chr5.3:61816948-61816967 | MS.gene009580:intron | 30.0% |
!!! | TTATTTTTGTCTTAACCCTC+CGG | - | chr5.3:61816486-61816505 | None:intergenic | 30.0% |
AATCCTTTGTACAACCTGAT+TGG | + | chr5.3:61818028-61818047 | MS.gene009580:intron | 35.0% | |
ACTCTTGTATTTACAGTGTG+TGG | - | chr5.3:61815851-61815870 | None:intergenic | 35.0% | |
ACTTGAAGAAGCTCAGATAT+AGG | - | chr5.3:61818152-61818171 | None:intergenic | 35.0% | |
ACTTGAAGAATCTTCTGTGT+TGG | - | chr5.3:61818780-61818799 | None:intergenic | 35.0% | |
AGAACATAAATGTCCCAATC+AGG | - | chr5.3:61818045-61818064 | None:intergenic | 35.0% | |
AGAATCTTCTGTGTTGGAAA+TGG | - | chr5.3:61818774-61818793 | None:intergenic | 35.0% | |
ATACACAAAGCTATAGAGAC+TGG | - | chr5.3:61817931-61817950 | None:intergenic | 35.0% | |
ATACACTTACTACGTCACAA+GGG | - | chr5.3:61818303-61818322 | None:intergenic | 35.0% | |
ATCCTTTGTACAACCTGATT+GGG | + | chr5.3:61818029-61818048 | MS.gene009580:intron | 35.0% | |
ATGAGAAACTACTTGTTTCG+AGG | + | chr5.3:61818206-61818225 | MS.gene009580:intron | 35.0% | |
ATTTACACGAGCGAAGAAAT+GGG | + | chr5.3:61817083-61817102 | MS.gene009580:CDS | 35.0% | |
CAGTTTCACTATAGCATCAT+AGG | + | chr5.3:61817763-61817782 | MS.gene009580:intron | 35.0% | |
CATAAATGTAACTGGCACAT+CGG | - | chr5.3:61818889-61818908 | None:intergenic | 35.0% | |
CCAAATCTCAAATTTCACTG+TGG | - | chr5.3:61816753-61816772 | None:intergenic | 35.0% | |
CCTACAACTGCTTATTGAAA+AGG | + | chr5.3:61818456-61818475 | MS.gene009580:intron | 35.0% | |
CCTTAACAAAACGCAAAACA+AGG | - | chr5.3:61815154-61815173 | None:intergenic | 35.0% | |
CTTCGTATAAGACTGAAGAA+GGG | + | chr5.3:61819412-61819431 | MS.gene009580:intron | 35.0% | |
GAAACAGGAATCAACAATAG+GGG | + | chr5.3:61816691-61816710 | MS.gene009580:intron | 35.0% | |
GATGTGCCAGTTACATTTAT+GGG | + | chr5.3:61818888-61818907 | MS.gene009580:intron | 35.0% | |
GCACTAAAATATTCCAAGCA+TGG | - | chr5.3:61816990-61817009 | None:intergenic | 35.0% | |
GTAGTTCCCATAAATGTAAC+TGG | - | chr5.3:61818897-61818916 | None:intergenic | 35.0% | |
GTGAAACAGGAATCAACAAT+AGG | + | chr5.3:61816689-61816708 | MS.gene009580:intron | 35.0% | |
TACACAAAGCTATAGAGACT+GGG | - | chr5.3:61817930-61817949 | None:intergenic | 35.0% | |
TATACACTTACTACGTCACA+AGG | - | chr5.3:61818304-61818323 | None:intergenic | 35.0% | |
TCTCATTCTGTTTAGTGAGA+CGG | - | chr5.3:61819592-61819611 | None:intergenic | 35.0% | |
TCTTCGTATAAGACTGAAGA+AGG | + | chr5.3:61819411-61819430 | MS.gene009580:intron | 35.0% | |
TTATCAAATGAAACCATCCC+TGG | - | chr5.3:61817867-61817886 | None:intergenic | 35.0% | |
TTGGTTAAACCTAAAACCCA+TGG | - | chr5.3:61815271-61815290 | None:intergenic | 35.0% | |
TTGTGACGTAGTAAGTGTAT+AGG | + | chr5.3:61818303-61818322 | MS.gene009580:intron | 35.0% | |
TTTATATCAGTCCAAGGAAG+AGG | + | chr5.3:61819157-61819176 | MS.gene009580:intron | 35.0% | |
! | ACTTTTATGCTGCTACGTTT+TGG | + | chr5.3:61817886-61817905 | MS.gene009580:intron | 35.0% |
! | CCACAGTGAAATTTGAGATT+TGG | + | chr5.3:61816750-61816769 | MS.gene009580:CDS | 35.0% |
! | CCTTTTCAATAAGCAGTTGT+AGG | - | chr5.3:61818459-61818478 | None:intergenic | 35.0% |
! | CTTTTATGCTGCTACGTTTT+GGG | + | chr5.3:61817887-61817906 | MS.gene009580:intron | 35.0% |
! | CTTTTCTAACCATAACCAAC+CGG | + | chr5.3:61817957-61817976 | MS.gene009580:intron | 35.0% |
! | GTTCACTCATGAACGTTTTA+TGG | - | chr5.3:61819454-61819473 | None:intergenic | 35.0% |
!! | ACAAGTTTTGTCACTCTGTA+GGG | + | chr5.3:61819548-61819567 | MS.gene009580:intron | 35.0% |
!! | ATTTGTGTTGTTTGCACTAC+TGG | + | chr5.3:61819221-61819240 | MS.gene009580:intron | 35.0% |
!! | GAAGCAAGGTATTTTCTGAT+TGG | + | chr5.3:61817119-61817138 | MS.gene009580:intron | 35.0% |
!! | TACAAGTTTTGTCACTCTGT+AGG | + | chr5.3:61819547-61819566 | MS.gene009580:intron | 35.0% |
!!! | ATGGTTTTGGAGGTTTGAAT+GGG | + | chr5.3:61815496-61815515 | MS.gene009580:intron | 35.0% |
!!! | CCTTGTTTTGCGTTTTGTTA+AGG | + | chr5.3:61815151-61815170 | MS.gene009580:CDS | 35.0% |
!!! | TATGGTTTTGGAGGTTTGAA+TGG | + | chr5.3:61815495-61815514 | MS.gene009580:intron | 35.0% |
AACAGCCAAGAAGTTACCAA+GGG | + | chr5.3:61819935-61819954 | MS.gene009580:intron | 40.0% | |
AAGAATCCGAGTTTGAATCC+TGG | + | chr5.3:61816387-61816406 | MS.gene009580:intron | 40.0% | |
AATATTCCAAGCATGGTCTC+TGG | - | chr5.3:61816983-61817002 | None:intergenic | 40.0% | |
AATCCAGCCCACTTTATTCA+AGG | - | chr5.3:61818573-61818592 | None:intergenic | 40.0% | |
ACAGCTCGTATGAGTTACAT+AGG | - | chr5.3:61815784-61815803 | None:intergenic | 40.0% | |
AGAATGTATGGTGGTACTTG+TGG | + | chr5.3:61815588-61815607 | MS.gene009580:intron | 40.0% | |
AGTGTATAGGTGGGATTTGT+TGG | + | chr5.3:61818316-61818335 | MS.gene009580:intron | 40.0% | |
ATTGTACAAGAGTCATGAGC+TGG | - | chr5.3:61818928-61818947 | None:intergenic | 40.0% | |
CAAGGAAGAGGAAGAGAAAA+TGG | + | chr5.3:61819169-61819188 | MS.gene009580:intron | 40.0% | |
CATTTACACGAGCGAAGAAA+TGG | + | chr5.3:61817082-61817101 | MS.gene009580:CDS | 40.0% | |
CCAAATAGTTCGCTCTTAAC+CGG | - | chr5.3:61816367-61816386 | None:intergenic | 40.0% | |
CGATGTGCCAGTTACATTTA+TGG | + | chr5.3:61818887-61818906 | MS.gene009580:intron | 40.0% | |
CGTATGAGTTACATAGGTGT+CGG | - | chr5.3:61815778-61815797 | None:intergenic | 40.0% | |
CGTGTATATGCTGAGGAAAA+TGG | + | chr5.3:61818958-61818977 | MS.gene009580:CDS | 40.0% | |
GAATGTATGGTGGTACTTGT+GGG | + | chr5.3:61815589-61815608 | MS.gene009580:intron | 40.0% | |
GACGTAGTAAGTGTATAGGT+GGG | + | chr5.3:61818307-61818326 | MS.gene009580:intron | 40.0% | |
GGGTCAATTCCTTGAATTTC+AGG | + | chr5.3:61815172-61815191 | MS.gene009580:CDS | 40.0% | |
TATGAAGCACAAACACCTCT+AGG | + | chr5.3:61815631-61815650 | MS.gene009580:intron | 40.0% | |
TCATGACTCTTGTACAATGC+AGG | + | chr5.3:61818930-61818949 | MS.gene009580:intron | 40.0% | |
TGACGTAGTAAGTGTATAGG+TGG | + | chr5.3:61818306-61818325 | MS.gene009580:intron | 40.0% | |
TGTTACAAAAGGACCCATTC+TGG | + | chr5.3:61817560-61817579 | MS.gene009580:intron | 40.0% | |
TTAGCTCCCATGTACTATAG+AGG | + | chr5.3:61816803-61816822 | MS.gene009580:CDS | 40.0% | |
TTCGTCTGGTGCAAATCAAA+AGG | - | chr5.3:61819347-61819366 | None:intergenic | 40.0% | |
! | ACTTGTTTCGAGGCTCATTT+TGG | + | chr5.3:61818216-61818235 | MS.gene009580:intron | 40.0% |
! | AGAATGGGTCCTTTTGTAAC+AGG | - | chr5.3:61817561-61817580 | None:intergenic | 40.0% |
! | CATCTTTTCCTCGTAAGTAG+TGG | - | chr5.3:61816530-61816549 | None:intergenic | 40.0% |
! | CATTTTCTCTTCCTCTTCCT+TGG | - | chr5.3:61819171-61819190 | None:intergenic | 40.0% |
! | CGGTTGGTTATGGTTAGAAA+AGG | - | chr5.3:61817959-61817978 | None:intergenic | 40.0% |
! | GAAATGGAGTACTAGGATCT+AGG | - | chr5.3:61818758-61818777 | None:intergenic | 40.0% |
! | GGACAATTTCCATGGGTTTT+AGG | + | chr5.3:61815259-61815278 | MS.gene009580:intron | 40.0% |
! | GGTCCTTTTGTAACAGGTAT+AGG | - | chr5.3:61817555-61817574 | None:intergenic | 40.0% |
! | TCTTCCTTGTTTGAAGATGC+CGG | - | chr5.3:61817979-61817998 | None:intergenic | 40.0% |
! | TGTGTTGGAAATGGAGTACT+AGG | - | chr5.3:61818765-61818784 | None:intergenic | 40.0% |
!! | AAGCTGACTTGGAAGATAAG+AGG | + | chr5.3:61817700-61817719 | MS.gene009580:CDS | 40.0% |
!! | TTGGACGAACTTCTAGCTTA+CGG | + | chr5.3:61818235-61818254 | MS.gene009580:intron | 40.0% |
!! | TTTTTACATTAGCGGTGTCG+AGG | + | chr5.3:61816114-61816133 | MS.gene009580:intron | 40.0% |
!!! | ACTCATTCTGGTTTTGTTGC+AGG | + | chr5.3:61817642-61817661 | MS.gene009580:intron | 40.0% |
!!! | CTCATTCTGGTTTTGTTGCA+GGG | + | chr5.3:61817643-61817662 | MS.gene009580:intron | 40.0% |
ACGTGTCATACGAGTGTCAT+AGG | - | chr5.3:61815684-61815703 | None:intergenic | 45.0% | |
ACTCCTTGAATAAAGTGGGC+TGG | + | chr5.3:61818567-61818586 | MS.gene009580:intron | 45.0% | |
AGTACATGGGAGCTAAGCTA+TGG | - | chr5.3:61816799-61816818 | None:intergenic | 45.0% | |
CACTTCAGCAATACCAGACT+AGG | - | chr5.3:61819296-61819315 | None:intergenic | 45.0% | |
CCGGTTAAGAGCGAACTATT+TGG | + | chr5.3:61816364-61816383 | MS.gene009580:intron | 45.0% | |
CGAATCAAAGCAGCAATGCA+TGG | - | chr5.3:61818614-61818633 | None:intergenic | 45.0% | |
GAACAGCCAAGAAGTTACCA+AGG | + | chr5.3:61819934-61819953 | MS.gene009580:intron | 45.0% | |
GAGTCATGAGCTGGATAAGT+TGG | - | chr5.3:61818919-61818938 | None:intergenic | 45.0% | |
GGGCTGGATTAATTCGTTGT+TGG | + | chr5.3:61818583-61818602 | MS.gene009580:intron | 45.0% | |
GTAACTCATACGAGCTGTGT+TGG | + | chr5.3:61815786-61815805 | MS.gene009580:intron | 45.0% | |
GTCATTTACTGCCAACGTCT+GGG | - | chr5.3:61816729-61816748 | None:intergenic | 45.0% | |
GTCTGGTATTGCTGAAGTGA+AGG | + | chr5.3:61819297-61819316 | MS.gene009580:intron | 45.0% | |
TACTTCGACACTCCTAAGAC+AGG | + | chr5.3:61815749-61815768 | MS.gene009580:intron | 45.0% | |
TAGTAGTGTGGGTGCATCAA+TGG | + | chr5.3:61816575-61816594 | MS.gene009580:intron | 45.0% | |
TGAACAACATGATGCAGCTC+TGG | - | chr5.3:61820018-61820037 | None:intergenic | 45.0% | |
TGCTGGTAACAAAGCTGACT+TGG | + | chr5.3:61817689-61817708 | MS.gene009580:CDS | 45.0% | |
! | AGCATTTTTCTCCCAGACGT+TGG | + | chr5.3:61816715-61816734 | MS.gene009580:CDS | 45.0% |
! | AGTTCTACTATCGGTGCTTC+TGG | + | chr5.3:61818512-61818531 | MS.gene009580:intron | 45.0% |
! | CTAGAGTACCACTACTTACG+AGG | + | chr5.3:61816519-61816538 | MS.gene009580:intron | 45.0% |
! | GTCCCAATCAGGTTGTACAA+AGG | - | chr5.3:61818034-61818053 | None:intergenic | 45.0% |
! | GTGGGTGCATCAATGGTTTT+GGG | + | chr5.3:61816582-61816601 | MS.gene009580:intron | 45.0% |
! | GTTAGGCAGATTCGACTTGA+AGG | + | chr5.3:61817438-61817457 | MS.gene009580:intron | 45.0% |
! | GTTCTACTATCGGTGCTTCT+GGG | + | chr5.3:61818513-61818532 | MS.gene009580:intron | 45.0% |
! | TACGAGTGTCATAGGAGTGT+CGG | - | chr5.3:61815676-61815695 | None:intergenic | 45.0% |
! | TGTGGGTGCATCAATGGTTT+TGG | + | chr5.3:61816581-61816600 | MS.gene009580:intron | 45.0% |
! | TTGAAGATGCCGGTTGGTTA+TGG | - | chr5.3:61817969-61817988 | None:intergenic | 45.0% |
! | TTGTGCCCTTGGTAACTTCT+TGG | - | chr5.3:61819943-61819962 | None:intergenic | 45.0% |
! | TTTGAGATTTGGGACACAGC+AGG | + | chr5.3:61816761-61816780 | MS.gene009580:CDS | 45.0% |
!! | TACCTTGCTTCTGAAGCTCT+TGG | - | chr5.3:61817110-61817129 | None:intergenic | 45.0% |
!! | TTATGCTGCTACGTTTTGGG+TGG | + | chr5.3:61817890-61817909 | MS.gene009580:intron | 45.0% |
!!! | GTCACAAGGGCTTTTTCAGT+TGG | - | chr5.3:61818290-61818309 | None:intergenic | 45.0% |
!!! | TTTTCCTTTCTTTAGGGCCC+TGG | + | chr5.3:61816955-61816974 | MS.gene009580:intron | 45.0% |
!!! | AAAAAAAATCAATTTTTTTT+TGG | - | chr5.3:61815290-61815309 | None:intergenic | 5.0% |
!!! | TTTAAAATTTAATAATATGA+TGG | + | chr5.3:61815415-61815434 | MS.gene009580:intron | 5.0% |
AGCAGCGCCTCTATAGTACA+TGG | - | chr5.3:61816813-61816832 | None:intergenic | 50.0% | |
ATCCGAGTTTGAATCCTGGC+TGG | + | chr5.3:61816391-61816410 | MS.gene009580:intron | 50.0% | |
ATGAAGCATGGACTCCGACA+CGG | - | chr5.3:61816143-61816162 | None:intergenic | 50.0% | |
CAACAAGAACCATCCCTGCT+GGG | - | chr5.3:61819977-61819996 | None:intergenic | 50.0% | |
CATGGTAATCGAGTTCGACC+GGG | - | chr5.3:61816445-61816464 | None:intergenic | 50.0% | |
CCAACCGGCATCTTCAAACA+AGG | + | chr5.3:61817972-61817991 | MS.gene009580:intron | 50.0% | |
CCATGGTAATCGAGTTCGAC+CGG | - | chr5.3:61816446-61816465 | None:intergenic | 50.0% | |
CGGTCGAACTCGATTACCAT+GGG | + | chr5.3:61816444-61816463 | MS.gene009580:intron | 50.0% | |
CGTCATTTACTGCCAACGTC+TGG | - | chr5.3:61816730-61816749 | None:intergenic | 50.0% | |
CTCCAGCCAGGATTCAAACT+CGG | - | chr5.3:61816396-61816415 | None:intergenic | 50.0% | |
GACACTCGTATGACACGTGT+CGG | + | chr5.3:61815686-61815705 | MS.gene009580:intron | 50.0% | |
GCAAAAGCCACGACCATGTT+CGG | - | chr5.3:61817672-61817691 | None:intergenic | 50.0% | |
GCAGCGCCTCTATAGTACAT+GGG | - | chr5.3:61816812-61816831 | None:intergenic | 50.0% | |
GGTCGAACTCGATTACCATG+GGG | + | chr5.3:61816445-61816464 | MS.gene009580:intron | 50.0% | |
GTCCAAGAGCTTCAGAAGCA+AGG | + | chr5.3:61817105-61817124 | MS.gene009580:CDS | 50.0% | |
TCAACAAGAACCATCCCTGC+TGG | - | chr5.3:61819978-61819997 | None:intergenic | 50.0% | |
TGGCTAAGAATACTCCAGCC+AGG | - | chr5.3:61816408-61816427 | None:intergenic | 50.0% | |
TGTTGCAGGGAATCCGAACA+TGG | + | chr5.3:61817656-61817675 | MS.gene009580:intron | 50.0% | |
! | AACATGGTCGTGGCTTTTGC+TGG | + | chr5.3:61817672-61817691 | MS.gene009580:CDS | 50.0% |
! | CCTTGTTTGAAGATGCCGGT+TGG | - | chr5.3:61817975-61817994 | None:intergenic | 50.0% |
! | CTTCTTGGTGATATGGGTGC+TGG | + | chr5.3:61815119-61815138 | MS.gene009580:CDS | 50.0% |
! | CTTGTTGATAGACCTGCCGA+AGG | + | chr5.3:61819990-61820009 | MS.gene009580:CDS | 50.0% |
! | GGAAGCACGTGTATATGCTG+AGG | + | chr5.3:61818951-61818970 | MS.gene009580:intron | 50.0% |
! | TGATGCAGCTCTGGTTCCTT+CGG | - | chr5.3:61820009-61820028 | None:intergenic | 50.0% |
!! | GCACAAACACCTCTAGGACT+AGG | + | chr5.3:61815637-61815656 | MS.gene009580:intron | 50.0% |
AACCAGCGCAAAACCCAGCA+GGG | + | chr5.3:61819961-61819980 | MS.gene009580:CDS | 55.0% | |
ACGTGTCGGACAGCTAAGAC+TGG | + | chr5.3:61815700-61815719 | MS.gene009580:intron | 55.0% | |
AGGGAATCCGAACATGGTCG+TGG | + | chr5.3:61817662-61817681 | MS.gene009580:intron | 55.0% | |
CCGGTCGAACTCGATTACCA+TGG | + | chr5.3:61816443-61816462 | MS.gene009580:intron | 55.0% | |
TCTTAACCCTCCGGTTCCCA+GGG | - | chr5.3:61816477-61816496 | None:intergenic | 55.0% | |
!! | AAGCATGGTCTCTGGAGCCA+GGG | - | chr5.3:61816975-61816994 | None:intergenic | 55.0% |
!! | AGGTGTCGGACACCTGTCTT+AGG | - | chr5.3:61815764-61815783 | None:intergenic | 55.0% |
!! | CTCTAGGACTAGGTGTGTCG+CGG | + | chr5.3:61815647-61815666 | MS.gene009580:intron | 55.0% |
!!! | TTTTGCGCTGGTTGTGCCCT+TGG | - | chr5.3:61819954-61819973 | None:intergenic | 55.0% |
AGCGCAAAACCCAGCAGGGA+TGG | + | chr5.3:61819965-61819984 | MS.gene009580:CDS | 60.0% | |
CAACCAGCGCAAAACCCAGC+AGG | + | chr5.3:61819960-61819979 | MS.gene009580:CDS | 60.0% | |
CGCGACACACCTAGTCCTAG+AGG | - | chr5.3:61815649-61815668 | None:intergenic | 60.0% | |
CTGGCTCCAGAGACCATGCT+TGG | + | chr5.3:61816974-61816993 | MS.gene009580:intron | 60.0% | |
CTTAACCCTCCGGTTCCCAG+GGG | - | chr5.3:61816476-61816495 | None:intergenic | 60.0% | |
GGAGCCAGGGCCCTAAAGAA+AGG | - | chr5.3:61816962-61816981 | None:intergenic | 60.0% | |
GTCTTAACCCTCCGGTTCCC+AGG | - | chr5.3:61816478-61816497 | None:intergenic | 60.0% | |
TACCATGGGGCCTTTCCCCT+GGG | + | chr5.3:61816458-61816477 | MS.gene009580:intron | 60.0% | |
TTACCATGGGGCCTTTCCCC+TGG | + | chr5.3:61816457-61816476 | MS.gene009580:intron | 60.0% | |
! | ATCCCTGCTGGGTTTTGCGC+TGG | - | chr5.3:61819966-61819985 | None:intergenic | 60.0% |
!! | CAAGCATGGTCTCTGGAGCC+AGG | - | chr5.3:61816976-61816995 | None:intergenic | 60.0% |
CCTTTCCCCTGGGAACCGGA+GGG | + | chr5.3:61816468-61816487 | MS.gene009580:intron | 65.0% | |
TTCCCAGGGGAAAGGCCCCA+TGG | - | chr5.3:61816463-61816482 | None:intergenic | 65.0% | |
! | CGGTGTCGAGGTGTCCGTGT+CGG | + | chr5.3:61816126-61816145 | MS.gene009580:intron | 65.0% |
! | GCAGCTCTGGTTCCTTCGGC+AGG | - | chr5.3:61820005-61820024 | None:intergenic | 65.0% |
CCCTCCGGTTCCCAGGGGAA+AGG | - | chr5.3:61816471-61816490 | None:intergenic | 70.0% | |
GCCTTTCCCCTGGGAACCGG+AGG | + | chr5.3:61816467-61816486 | MS.gene009580:intron | 70.0% | |
GGGGCCTTTCCCCTGGGAAC+CGG | + | chr5.3:61816464-61816483 | MS.gene009580:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 61815116 | 61820040 | 61815116 | ID=MS.gene009580 |
chr5.3 | mRNA | 61815116 | 61820040 | 61815116 | ID=MS.gene009580.t1;Parent=MS.gene009580 |
chr5.3 | exon | 61815116 | 61815193 | 61815116 | ID=MS.gene009580.t1.exon1;Parent=MS.gene009580.t1 |
chr5.3 | CDS | 61815116 | 61815193 | 61815116 | ID=cds.MS.gene009580.t1;Parent=MS.gene009580.t1 |
chr5.3 | exon | 61816698 | 61816865 | 61816698 | ID=MS.gene009580.t1.exon2;Parent=MS.gene009580.t1 |
chr5.3 | CDS | 61816698 | 61816865 | 61816698 | ID=cds.MS.gene009580.t1;Parent=MS.gene009580.t1 |
chr5.3 | exon | 61817078 | 61817126 | 61817078 | ID=MS.gene009580.t1.exon3;Parent=MS.gene009580.t1 |
chr5.3 | CDS | 61817078 | 61817126 | 61817078 | ID=cds.MS.gene009580.t1;Parent=MS.gene009580.t1 |
chr5.3 | exon | 61817664 | 61817737 | 61817664 | ID=MS.gene009580.t1.exon4;Parent=MS.gene009580.t1 |
chr5.3 | CDS | 61817664 | 61817737 | 61817664 | ID=cds.MS.gene009580.t1;Parent=MS.gene009580.t1 |
chr5.3 | exon | 61818952 | 61819045 | 61818952 | ID=MS.gene009580.t1.exon5;Parent=MS.gene009580.t1 |
chr5.3 | CDS | 61818952 | 61819045 | 61818952 | ID=cds.MS.gene009580.t1;Parent=MS.gene009580.t1 |
chr5.3 | exon | 61819940 | 61820040 | 61819940 | ID=MS.gene009580.t1.exon6;Parent=MS.gene009580.t1 |
chr5.3 | CDS | 61819940 | 61820040 | 61819940 | ID=cds.MS.gene009580.t1;Parent=MS.gene009580.t1 |
Gene Sequence |
Protein sequence |