Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065863.t1 | KEH40695.1 | 30.2 | 325 | 172 | 7 | 28 | 301 | 37 | 357 | 7.40E-22 | 114.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065863.t1 | A0A072VRD3 | 30.2 | 325 | 172 | 7 | 28 | 301 | 37 | 357 | 5.4e-22 | 114.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene065863 | 0.82615 | 3.18E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene065863 | 0.816522 | 5.29E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene065863 | 0.800284 | 1.55E-48 | -1.69E-46 |
| MS.gene050549 | MS.gene065863 | 0.811898 | 5.56E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene065863 | 0.808492 | 3.02E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene065863 | 0.824858 | 6.43E-54 | -1.69E-46 |
| MS.gene051800 | MS.gene065863 | 0.815317 | 9.83E-52 | -1.69E-46 |
| MS.gene052456 | MS.gene065863 | 0.832114 | 1.14E-55 | -1.69E-46 |
| MS.gene052863 | MS.gene065863 | 0.801569 | 8.46E-49 | -1.69E-46 |
| MS.gene05288 | MS.gene065863 | 0.845757 | 3.33E-59 | -1.69E-46 |
| MS.gene05289 | MS.gene065863 | 0.834847 | 2.37E-56 | -1.69E-46 |
| MS.gene053166 | MS.gene065863 | 0.815401 | 9.42E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene065863 | 0.817473 | 3.24E-52 | -1.69E-46 |
| MS.gene054559 | MS.gene065863 | 0.815906 | 7.27E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene065863 | 0.813698 | 2.24E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene065863 | 0.846131 | 2.63E-59 | -1.69E-46 |
| MS.gene054801 | MS.gene065863 | 0.882788 | 7.77E-71 | -1.69E-46 |
| MS.gene055227 | MS.gene065863 | 0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene065863 | 0.810961 | 8.88E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene065863 | 0.803427 | 3.50E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene065863 | 0.816229 | 6.16E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene065863 | 0.815637 | 8.35E-52 | -1.69E-46 |
| MS.gene055875 | MS.gene065863 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene065863 | 0.819788 | 9.66E-53 | -1.69E-46 |
| MS.gene056252 | MS.gene065863 | 0.818122 | 2.31E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene065863 | 0.804294 | 2.32E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene065863 | 0.811804 | 5.83E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene065863 | 0.801304 | 9.59E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene065863 | 0.816155 | 6.40E-52 | -1.69E-46 |
| MS.gene058515 | MS.gene065863 | 0.838205 | 3.30E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene065863 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene065863 | 0.813607 | 2.35E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene065863 | 0.816266 | 6.04E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene065863 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene065863 | 0.821365 | 4.20E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene065863 | 0.80507 | 1.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065863.t1 | MTR_1g033450 | 29.538 | 325 | 174 | 7 | 28 | 301 | 37 | 357 | 9.48e-29 | 115 |
| MS.gene065863.t1 | MTR_0572s0010 | 27.442 | 215 | 139 | 2 | 88 | 302 | 224 | 421 | 3.19e-21 | 94.4 |
| MS.gene065863.t1 | MTR_1g050495 | 25.446 | 224 | 159 | 3 | 88 | 310 | 220 | 436 | 7.34e-20 | 90.5 |
| MS.gene065863.t1 | MTR_6g079380 | 25.733 | 307 | 175 | 7 | 20 | 310 | 166 | 435 | 9.18e-20 | 90.1 |
| MS.gene065863.t1 | MTR_6g078190 | 24.828 | 290 | 175 | 5 | 40 | 302 | 64 | 337 | 4.20e-19 | 88.2 |
| MS.gene065863.t1 | MTR_3g448620 | 27.962 | 211 | 145 | 3 | 88 | 298 | 215 | 418 | 5.65e-19 | 87.8 |
| MS.gene065863.t1 | MTR_6g079920 | 25.267 | 281 | 196 | 5 | 40 | 312 | 192 | 466 | 1.16e-18 | 86.7 |
| MS.gene065863.t1 | MTR_6g079920 | 20.922 | 282 | 194 | 5 | 35 | 301 | 292 | 559 | 8.97e-12 | 66.2 |
| MS.gene065863.t1 | MTR_6g077540 | 24.510 | 306 | 191 | 6 | 20 | 310 | 182 | 462 | 3.02e-18 | 85.5 |
| MS.gene065863.t1 | MTR_6g077540 | 20.070 | 284 | 194 | 6 | 35 | 301 | 291 | 558 | 8.42e-12 | 66.2 |
| MS.gene065863.t1 | MTR_6g079830 | 24.549 | 277 | 196 | 4 | 41 | 310 | 193 | 463 | 8.92e-18 | 84.3 |
| MS.gene065863.t1 | MTR_6g079830 | 21.790 | 257 | 188 | 3 | 40 | 289 | 87 | 337 | 5.78e-11 | 63.5 |
| MS.gene065863.t1 | MTR_8g107050 | 24.306 | 288 | 184 | 6 | 23 | 291 | 282 | 554 | 9.29e-18 | 84.3 |
| MS.gene065863.t1 | MTR_8g107050 | 24.306 | 288 | 184 | 6 | 23 | 291 | 282 | 554 | 1.03e-17 | 84.0 |
| MS.gene065863.t1 | MTR_6g079240 | 27.317 | 205 | 141 | 3 | 88 | 291 | 64 | 261 | 1.98e-17 | 82.8 |
| MS.gene065863.t1 | MTR_6g079240 | 21.654 | 254 | 178 | 3 | 63 | 301 | 129 | 376 | 5.63e-14 | 72.4 |
| MS.gene065863.t1 | MTR_6g078160 | 27.232 | 224 | 155 | 3 | 88 | 310 | 218 | 434 | 2.17e-17 | 82.8 |
| MS.gene065863.t1 | MTR_6g079310 | 26.389 | 216 | 151 | 3 | 88 | 302 | 176 | 384 | 2.17e-17 | 82.8 |
| MS.gene065863.t1 | MTR_6g079310 | 21.654 | 254 | 178 | 3 | 63 | 301 | 241 | 488 | 6.20e-14 | 72.4 |
| MS.gene065863.t1 | MTR_6g478210 | 25.180 | 278 | 193 | 5 | 41 | 310 | 10 | 280 | 2.61e-17 | 82.0 |
| MS.gene065863.t1 | MTR_6g079890 | 24.658 | 292 | 205 | 5 | 27 | 310 | 132 | 416 | 2.88e-17 | 82.4 |
| MS.gene065863.t1 | MTR_2g035630 | 27.602 | 221 | 152 | 3 | 91 | 310 | 223 | 436 | 3.01e-17 | 82.4 |
| MS.gene065863.t1 | MTR_2g035630 | 21.094 | 256 | 177 | 4 | 63 | 301 | 285 | 532 | 5.41e-13 | 69.7 |
| MS.gene065863.t1 | MTR_0014s0210 | 25.185 | 270 | 184 | 6 | 41 | 302 | 120 | 379 | 3.94e-17 | 82.0 |
| MS.gene065863.t1 | MTR_0014s0210 | 21.401 | 257 | 174 | 4 | 62 | 301 | 238 | 483 | 6.45e-11 | 63.5 |
| MS.gene065863.t1 | MTR_0177s0060 | 22.112 | 303 | 169 | 4 | 64 | 302 | 101 | 400 | 6.48e-17 | 81.6 |
| MS.gene065863.t1 | MTR_3g061000 | 24.000 | 250 | 167 | 4 | 77 | 310 | 205 | 447 | 9.73e-17 | 80.9 |
| MS.gene065863.t1 | MTR_0654s0010 | 28.856 | 201 | 125 | 5 | 81 | 270 | 105 | 298 | 1.12e-16 | 80.5 |
| MS.gene065863.t1 | MTR_6g079210 | 23.741 | 278 | 181 | 6 | 41 | 302 | 10 | 272 | 1.22e-16 | 80.1 |
| MS.gene065863.t1 | MTR_6g079210 | 21.277 | 282 | 189 | 6 | 37 | 301 | 111 | 376 | 9.25e-14 | 71.6 |
| MS.gene065863.t1 | MTR_0237s0070 | 24.510 | 306 | 189 | 6 | 20 | 309 | 291 | 570 | 1.41e-16 | 80.9 |
| MS.gene065863.t1 | MTR_0237s0070 | 22.441 | 254 | 176 | 5 | 63 | 301 | 420 | 667 | 2.93e-12 | 67.8 |
| MS.gene065863.t1 | MTR_6g079250 | 25.180 | 278 | 177 | 7 | 41 | 302 | 10 | 272 | 1.59e-16 | 79.7 |
| MS.gene065863.t1 | MTR_0014s0260 | 27.317 | 205 | 141 | 3 | 88 | 291 | 156 | 353 | 2.11e-16 | 79.7 |
| MS.gene065863.t1 | MTR_0019s0210 | 23.423 | 222 | 164 | 2 | 81 | 302 | 218 | 433 | 2.13e-16 | 80.1 |
| MS.gene065863.t1 | MTR_6g079180 | 24.042 | 287 | 187 | 6 | 40 | 310 | 9 | 280 | 3.05e-16 | 79.0 |
| MS.gene065863.t1 | MTR_6g079180 | 21.455 | 275 | 183 | 6 | 37 | 294 | 111 | 369 | 4.86e-13 | 69.3 |
| MS.gene065863.t1 | MTR_7g076550 | 26.275 | 255 | 177 | 4 | 48 | 302 | 198 | 441 | 3.71e-16 | 79.3 |
| MS.gene065863.t1 | MTR_6g080210 | 25.431 | 232 | 160 | 5 | 67 | 295 | 200 | 421 | 3.75e-16 | 79.3 |
| MS.gene065863.t1 | MTR_0014s0180 | 25.463 | 216 | 153 | 3 | 88 | 302 | 223 | 431 | 4.01e-16 | 79.3 |
| MS.gene065863.t1 | MTR_6g065540 | 25.468 | 267 | 168 | 5 | 41 | 291 | 178 | 429 | 5.55e-16 | 79.0 |
| MS.gene065863.t1 | MTR_6g065540 | 21.942 | 278 | 184 | 5 | 41 | 301 | 283 | 544 | 9.53e-14 | 72.0 |
| MS.gene065863.t1 | MTR_6g065560 | 27.692 | 195 | 135 | 2 | 88 | 282 | 263 | 451 | 8.77e-16 | 78.2 |
| MS.gene065863.t1 | MTR_3g034990 | 26.389 | 216 | 151 | 3 | 88 | 302 | 230 | 438 | 1.04e-15 | 77.8 |
| MS.gene065863.t1 | MTR_0308s0020 | 25.000 | 224 | 160 | 3 | 88 | 310 | 216 | 432 | 1.36e-15 | 77.4 |
| MS.gene065863.t1 | MTR_0308s0020 | 23.282 | 262 | 168 | 5 | 63 | 303 | 106 | 355 | 3.35e-11 | 64.3 |
| MS.gene065863.t1 | MTR_6g079590 | 25.000 | 280 | 177 | 6 | 41 | 303 | 275 | 538 | 1.51e-15 | 77.4 |
| MS.gene065863.t1 | MTR_6g079590 | 23.741 | 278 | 191 | 4 | 44 | 310 | 173 | 440 | 1.30e-13 | 71.6 |
| MS.gene065863.t1 | MTR_6g079590 | 21.708 | 281 | 187 | 7 | 40 | 303 | 64 | 328 | 1.88e-12 | 68.2 |
| MS.gene065863.t1 | MTR_1g045850 | 21.429 | 238 | 166 | 3 | 80 | 302 | 149 | 380 | 2.56e-15 | 76.6 |
| MS.gene065863.t1 | MTR_5g095130 | 22.764 | 246 | 166 | 4 | 74 | 304 | 615 | 851 | 3.04e-15 | 77.0 |
| MS.gene065863.t1 | MTR_4g107180 | 23.318 | 223 | 165 | 2 | 88 | 310 | 115 | 331 | 3.16e-15 | 76.3 |
| MS.gene065863.t1 | MTR_1g064390 | 24.638 | 207 | 146 | 4 | 88 | 291 | 216 | 415 | 3.18e-15 | 76.6 |
| MS.gene065863.t1 | MTR_6g078210 | 25.112 | 223 | 161 | 2 | 88 | 310 | 234 | 450 | 5.90e-15 | 75.9 |
| MS.gene065863.t1 | MTR_6g079960 | 24.476 | 286 | 187 | 5 | 40 | 310 | 170 | 441 | 7.01e-15 | 75.5 |
| MS.gene065863.t1 | MTR_7g012890 | 24.453 | 274 | 184 | 5 | 41 | 302 | 167 | 429 | 1.41e-14 | 74.7 |
| MS.gene065863.t1 | MTR_0014s0250 | 24.651 | 215 | 156 | 3 | 88 | 302 | 220 | 428 | 1.73e-14 | 74.3 |
| MS.gene065863.t1 | MTR_6g445320 | 24.651 | 215 | 149 | 3 | 88 | 302 | 219 | 420 | 3.04e-14 | 73.6 |
| MS.gene065863.t1 | MTR_6g069300 | 22.340 | 282 | 198 | 5 | 40 | 310 | 171 | 442 | 4.06e-14 | 73.2 |
| MS.gene065863.t1 | MTR_1g033960 | 22.556 | 266 | 177 | 5 | 41 | 291 | 302 | 553 | 5.41e-14 | 73.2 |
| MS.gene065863.t1 | MTR_1g033960 | 26.744 | 258 | 160 | 8 | 65 | 303 | 283 | 530 | 5.41e-11 | 63.9 |
| MS.gene065863.t1 | MTR_6g069180 | 24.373 | 279 | 182 | 4 | 40 | 303 | 63 | 327 | 5.49e-14 | 72.8 |
| MS.gene065863.t1 | MTR_6g069180 | 24.074 | 216 | 156 | 4 | 88 | 302 | 223 | 431 | 6.03e-11 | 63.5 |
| MS.gene065863.t1 | MTR_6g079220 | 22.330 | 206 | 150 | 4 | 88 | 291 | 225 | 422 | 2.07e-13 | 70.9 |
| MS.gene065863.t1 | MTR_1840s0010 | 31.111 | 135 | 87 | 2 | 88 | 222 | 207 | 335 | 2.14e-13 | 70.1 |
| MS.gene065863.t1 | MTR_1g016213 | 25.414 | 181 | 129 | 2 | 91 | 271 | 16 | 190 | 2.27e-13 | 69.7 |
| MS.gene065863.t1 | MTR_2g048635 | 26.667 | 135 | 91 | 3 | 140 | 270 | 111 | 241 | 2.82e-13 | 68.9 |
| MS.gene065863.t1 | MTR_0429s0020 | 23.256 | 215 | 159 | 2 | 88 | 302 | 233 | 441 | 6.32e-13 | 69.7 |
| MS.gene065863.t1 | MTR_4g068360 | 25.000 | 232 | 159 | 7 | 62 | 291 | 358 | 576 | 6.61e-13 | 69.7 |
| MS.gene065863.t1 | MTR_6g061120 | 24.664 | 223 | 162 | 2 | 88 | 310 | 86 | 302 | 7.28e-13 | 68.9 |
| MS.gene065863.t1 | MTR_6g471100 | 21.993 | 291 | 194 | 6 | 31 | 303 | 234 | 509 | 1.51e-12 | 68.6 |
| MS.gene065863.t1 | MTR_6g478130 | 22.963 | 270 | 180 | 5 | 65 | 310 | 29 | 294 | 1.67e-12 | 67.8 |
| MS.gene065863.t1 | MTR_6g478130 | 22.662 | 278 | 182 | 6 | 41 | 295 | 83 | 350 | 7.72e-11 | 62.8 |
| MS.gene065863.t1 | MTR_1g029490 | 20.803 | 274 | 194 | 5 | 41 | 302 | 173 | 435 | 2.09e-12 | 68.2 |
| MS.gene065863.t1 | MTR_5g077930 | 24.265 | 272 | 176 | 5 | 41 | 296 | 229 | 486 | 2.78e-12 | 67.8 |
| MS.gene065863.t1 | MTR_6g068820 | 23.318 | 223 | 165 | 3 | 88 | 310 | 141 | 357 | 2.79e-12 | 67.4 |
| MS.gene065863.t1 | MTR_0110s0060 | 21.300 | 277 | 205 | 3 | 41 | 310 | 163 | 433 | 3.09e-12 | 67.4 |
| MS.gene065863.t1 | MTR_6g069840 | 23.308 | 266 | 175 | 4 | 41 | 291 | 254 | 505 | 3.55e-12 | 67.4 |
| MS.gene065863.t1 | MTR_6g069840 | 25.434 | 173 | 119 | 5 | 92 | 262 | 207 | 371 | 1.32e-11 | 65.5 |
| MS.gene065863.t1 | MTR_6g082970 | 24.537 | 216 | 155 | 3 | 88 | 302 | 21 | 229 | 4.12e-12 | 65.5 |
| MS.gene065863.t1 | MTR_6g069840 | 23.308 | 266 | 175 | 4 | 41 | 291 | 270 | 521 | 4.34e-12 | 67.0 |
| MS.gene065863.t1 | MTR_6g069840 | 25.434 | 173 | 119 | 5 | 92 | 262 | 223 | 387 | 1.58e-11 | 65.5 |
| MS.gene065863.t1 | MTR_7g067460 | 23.600 | 250 | 165 | 6 | 64 | 295 | 112 | 353 | 4.55e-12 | 67.0 |
| MS.gene065863.t1 | MTR_3g088505 | 25.862 | 232 | 146 | 5 | 65 | 279 | 219 | 441 | 4.66e-12 | 66.6 |
| MS.gene065863.t1 | MTR_1g016220 | 25.143 | 175 | 125 | 2 | 97 | 271 | 27 | 195 | 5.11e-12 | 65.5 |
| MS.gene065863.t1 | MTR_0573s0020 | 21.875 | 256 | 175 | 5 | 63 | 301 | 8 | 255 | 5.36e-12 | 65.5 |
| MS.gene065863.t1 | MTR_6g079290 | 22.927 | 205 | 143 | 3 | 92 | 295 | 1 | 191 | 6.30e-12 | 65.5 |
| MS.gene065863.t1 | MTR_0054s0140 | 24.123 | 228 | 150 | 5 | 80 | 291 | 257 | 477 | 9.08e-12 | 65.9 |
| MS.gene065863.t1 | MTR_0054s0140 | 23.827 | 277 | 158 | 4 | 40 | 289 | 85 | 335 | 9.16e-12 | 65.9 |
| MS.gene065863.t1 | MTR_1g091880 | 25.258 | 194 | 122 | 4 | 80 | 257 | 16 | 202 | 1.05e-11 | 65.5 |
| MS.gene065863.t1 | MTR_2g049740 | 22.984 | 248 | 162 | 7 | 65 | 293 | 245 | 482 | 1.58e-11 | 65.5 |
| MS.gene065863.t1 | MTR_7g405940 | 21.277 | 235 | 161 | 5 | 72 | 289 | 224 | 451 | 3.99e-11 | 64.3 |
| MS.gene065863.t1 | MTR_5g089850 | 22.179 | 257 | 138 | 4 | 65 | 281 | 265 | 499 | 4.02e-11 | 63.9 |
| MS.gene065863.t1 | MTR_7g011500 | 25.397 | 252 | 153 | 9 | 65 | 291 | 454 | 695 | 5.54e-11 | 63.9 |
| MS.gene065863.t1 | MTR_6g068790 | 23.721 | 215 | 158 | 3 | 88 | 302 | 232 | 440 | 5.66e-11 | 63.5 |
| MS.gene065863.t1 | MTR_4g076540 | 24.609 | 256 | 165 | 6 | 72 | 305 | 560 | 809 | 5.93e-11 | 63.9 |
| MS.gene065863.t1 | MTR_2g041700 | 24.581 | 179 | 130 | 2 | 88 | 266 | 235 | 408 | 6.14e-11 | 63.5 |
| MS.gene065863.t1 | MTR_8g105170 | 22.177 | 248 | 164 | 5 | 63 | 291 | 434 | 671 | 9.15e-11 | 63.2 |
| MS.gene065863.t1 | MTR_5g029690 | 24.113 | 282 | 168 | 6 | 65 | 301 | 340 | 620 | 9.64e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065863.t1 | AT5G41170 | 24.627 | 268 | 166 | 7 | 65 | 304 | 61 | 320 | 2.60e-16 | 79.3 |
| MS.gene065863.t1 | AT3G06920 | 26.728 | 217 | 144 | 4 | 91 | 304 | 612 | 816 | 3.20e-16 | 79.7 |
| MS.gene065863.t1 | AT3G06920 | 26.728 | 217 | 144 | 4 | 91 | 304 | 626 | 830 | 3.66e-16 | 79.7 |
| MS.gene065863.t1 | AT3G06920 | 26.728 | 217 | 144 | 4 | 91 | 304 | 626 | 830 | 3.66e-16 | 79.7 |
| MS.gene065863.t1 | AT5G41170 | 24.627 | 268 | 166 | 7 | 65 | 304 | 161 | 420 | 5.38e-16 | 79.0 |
| MS.gene065863.t1 | AT5G41170 | 24.627 | 268 | 166 | 7 | 65 | 304 | 161 | 420 | 5.78e-16 | 78.6 |
| MS.gene065863.t1 | AT5G59900 | 23.052 | 308 | 184 | 7 | 37 | 299 | 191 | 490 | 4.48e-15 | 76.3 |
| MS.gene065863.t1 | AT5G59900 | 25.094 | 267 | 178 | 8 | 41 | 295 | 370 | 626 | 3.73e-11 | 64.3 |
| MS.gene065863.t1 | AT4G28010 | 23.985 | 271 | 176 | 6 | 41 | 295 | 110 | 366 | 1.15e-14 | 75.1 |
| MS.gene065863.t1 | AT1G13040 | 22.819 | 298 | 172 | 7 | 41 | 291 | 223 | 509 | 1.36e-13 | 71.6 |
| MS.gene065863.t1 | AT1G13040 | 22.819 | 298 | 172 | 7 | 41 | 291 | 223 | 509 | 1.36e-13 | 71.6 |
| MS.gene065863.t1 | AT1G64583 | 22.581 | 310 | 205 | 7 | 12 | 302 | 88 | 381 | 2.24e-13 | 70.9 |
| MS.gene065863.t1 | AT1G64583 | 22.581 | 310 | 205 | 7 | 12 | 302 | 113 | 406 | 2.39e-13 | 70.9 |
| MS.gene065863.t1 | AT1G62680 | 23.322 | 283 | 179 | 8 | 40 | 304 | 87 | 349 | 4.56e-13 | 70.1 |
| MS.gene065863.t1 | AT1G62680 | 23.322 | 283 | 179 | 8 | 40 | 304 | 87 | 349 | 4.56e-13 | 70.1 |
| MS.gene065863.t1 | AT1G62720 | 25.806 | 248 | 150 | 6 | 62 | 307 | 120 | 335 | 6.89e-13 | 69.3 |
| MS.gene065863.t1 | AT1G62930 | 22.257 | 319 | 186 | 7 | 20 | 291 | 101 | 404 | 1.10e-12 | 68.9 |
| MS.gene065863.t1 | AT1G31840 | 25.000 | 244 | 154 | 6 | 65 | 289 | 410 | 643 | 1.41e-12 | 68.9 |
| MS.gene065863.t1 | AT1G63130 | 22.945 | 292 | 190 | 6 | 19 | 291 | 130 | 405 | 1.55e-12 | 68.6 |
| MS.gene065863.t1 | AT1G63130 | 22.945 | 292 | 190 | 6 | 19 | 291 | 130 | 405 | 1.55e-12 | 68.6 |
| MS.gene065863.t1 | AT5G46580 | 25.600 | 250 | 160 | 6 | 72 | 303 | 212 | 453 | 1.57e-12 | 68.6 |
| MS.gene065863.t1 | AT1G62590 | 24.806 | 258 | 164 | 6 | 65 | 304 | 174 | 419 | 1.63e-12 | 68.6 |
| MS.gene065863.t1 | AT1G62590 | 23.077 | 273 | 191 | 5 | 30 | 291 | 75 | 339 | 3.03e-12 | 67.8 |
| MS.gene065863.t1 | AT1G62590 | 24.806 | 258 | 164 | 6 | 65 | 304 | 174 | 419 | 1.63e-12 | 68.6 |
| MS.gene065863.t1 | AT1G62590 | 23.077 | 273 | 191 | 5 | 30 | 291 | 75 | 339 | 3.03e-12 | 67.8 |
| MS.gene065863.t1 | AT5G39710 | 24.180 | 244 | 159 | 6 | 74 | 299 | 303 | 538 | 1.65e-12 | 68.6 |
| MS.gene065863.t1 | AT5G39710 | 23.529 | 204 | 139 | 5 | 91 | 288 | 405 | 597 | 8.60e-11 | 63.2 |
| MS.gene065863.t1 | AT1G09900 | 21.106 | 199 | 150 | 3 | 98 | 295 | 376 | 568 | 1.69e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.78e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT1G06710 | 22.275 | 211 | 148 | 3 | 92 | 289 | 579 | 786 | 1.91e-12 | 68.6 |
| MS.gene065863.t1 | AT3G16710 | 21.951 | 246 | 167 | 4 | 75 | 303 | 217 | 454 | 3.13e-12 | 67.4 |
| MS.gene065863.t1 | AT3G16710 | 21.739 | 253 | 172 | 6 | 65 | 299 | 172 | 416 | 5.61e-11 | 63.5 |
| MS.gene065863.t1 | AT3G16710 | 22.222 | 234 | 157 | 4 | 75 | 291 | 217 | 442 | 4.80e-12 | 66.6 |
| MS.gene065863.t1 | AT3G16710 | 21.739 | 253 | 172 | 6 | 65 | 299 | 172 | 416 | 7.76e-11 | 63.2 |
| MS.gene065863.t1 | AT1G63330 | 23.282 | 262 | 182 | 5 | 40 | 291 | 12 | 264 | 5.05e-12 | 67.0 |
| MS.gene065863.t1 | AT1G63330 | 24.419 | 258 | 165 | 6 | 65 | 304 | 99 | 344 | 5.53e-12 | 66.6 |
| MS.gene065863.t1 | AT1G63330 | 23.282 | 262 | 182 | 5 | 40 | 291 | 12 | 264 | 5.05e-12 | 67.0 |
| MS.gene065863.t1 | AT1G63330 | 24.419 | 258 | 165 | 6 | 65 | 304 | 99 | 344 | 5.53e-12 | 66.6 |
| MS.gene065863.t1 | AT1G63330 | 23.282 | 262 | 182 | 5 | 40 | 291 | 12 | 264 | 5.05e-12 | 67.0 |
| MS.gene065863.t1 | AT1G63330 | 24.419 | 258 | 165 | 6 | 65 | 304 | 99 | 344 | 5.53e-12 | 66.6 |
| MS.gene065863.t1 | AT1G12620 | 21.782 | 202 | 152 | 2 | 102 | 303 | 283 | 478 | 5.58e-12 | 67.0 |
| MS.gene065863.t1 | AT1G12620 | 28.750 | 160 | 106 | 5 | 140 | 295 | 141 | 296 | 8.33e-12 | 66.2 |
| MS.gene065863.t1 | AT1G63080 | 23.301 | 309 | 191 | 10 | 19 | 304 | 114 | 399 | 6.14e-12 | 66.6 |
| MS.gene065863.t1 | AT1G63080 | 21.176 | 255 | 176 | 4 | 65 | 302 | 224 | 470 | 3.51e-11 | 64.3 |
| MS.gene065863.t1 | AT1G63080 | 23.301 | 309 | 191 | 10 | 19 | 304 | 114 | 399 | 6.14e-12 | 66.6 |
| MS.gene065863.t1 | AT1G63080 | 21.176 | 255 | 176 | 4 | 65 | 302 | 224 | 470 | 3.51e-11 | 64.3 |
| MS.gene065863.t1 | AT1G63080 | 23.301 | 309 | 191 | 10 | 19 | 304 | 114 | 399 | 6.14e-12 | 66.6 |
| MS.gene065863.t1 | AT1G63080 | 21.176 | 255 | 176 | 4 | 65 | 302 | 224 | 470 | 3.51e-11 | 64.3 |
| MS.gene065863.t1 | AT2G01740 | 19.421 | 242 | 167 | 4 | 63 | 302 | 73 | 288 | 8.64e-12 | 66.2 |
| MS.gene065863.t1 | AT2G02150 | 23.673 | 245 | 156 | 4 | 78 | 302 | 329 | 562 | 1.29e-11 | 65.9 |
| MS.gene065863.t1 | AT2G02150 | 23.673 | 245 | 156 | 4 | 78 | 302 | 329 | 562 | 1.29e-11 | 65.9 |
| MS.gene065863.t1 | AT1G62670 | 23.529 | 255 | 168 | 8 | 65 | 301 | 205 | 450 | 2.10e-11 | 65.1 |
| MS.gene065863.t1 | AT1G62670 | 23.529 | 255 | 168 | 8 | 65 | 301 | 205 | 450 | 2.10e-11 | 65.1 |
| MS.gene065863.t1 | AT4G26800 | 21.168 | 274 | 191 | 7 | 42 | 302 | 17 | 278 | 2.60e-11 | 64.3 |
| MS.gene065863.t1 | AT1G12700 | 23.045 | 243 | 166 | 4 | 64 | 291 | 157 | 393 | 3.19e-11 | 64.7 |
| MS.gene065863.t1 | AT1G12700 | 23.045 | 243 | 166 | 4 | 64 | 291 | 157 | 393 | 3.19e-11 | 64.7 |
| MS.gene065863.t1 | AT1G74580 | 21.633 | 245 | 166 | 5 | 65 | 291 | 375 | 611 | 3.50e-11 | 64.7 |
| MS.gene065863.t1 | AT1G74580 | 21.633 | 245 | 166 | 5 | 65 | 291 | 375 | 611 | 3.50e-11 | 64.7 |
| MS.gene065863.t1 | AT1G74580 | 21.633 | 245 | 166 | 5 | 65 | 291 | 375 | 611 | 3.50e-11 | 64.7 |
| MS.gene065863.t1 | AT3G22470 | 20.974 | 267 | 178 | 6 | 40 | 289 | 72 | 322 | 3.52e-11 | 64.3 |
| MS.gene065863.t1 | AT4G26800 | 21.168 | 274 | 191 | 7 | 42 | 302 | 87 | 348 | 3.75e-11 | 63.9 |
| MS.gene065863.t1 | AT2G31400 | 23.438 | 256 | 171 | 6 | 77 | 315 | 370 | 617 | 3.85e-11 | 64.3 |
| MS.gene065863.t1 | AT1G12700 | 23.045 | 243 | 166 | 4 | 64 | 291 | 141 | 377 | 3.95e-11 | 64.3 |
| MS.gene065863.t1 | AT3G22470 | 20.974 | 267 | 178 | 6 | 40 | 289 | 72 | 322 | 4.08e-11 | 64.3 |
| MS.gene065863.t1 | AT1G06580 | 23.148 | 216 | 155 | 4 | 90 | 304 | 32 | 237 | 4.69e-11 | 63.5 |
| MS.gene065863.t1 | AT1G06580 | 23.148 | 216 | 155 | 4 | 90 | 304 | 32 | 237 | 4.69e-11 | 63.5 |
| MS.gene065863.t1 | AT4G26800 | 21.168 | 274 | 191 | 7 | 42 | 302 | 162 | 423 | 4.72e-11 | 63.9 |
| MS.gene065863.t1 | AT2G31400 | 23.438 | 256 | 171 | 6 | 77 | 315 | 370 | 617 | 5.52e-11 | 63.9 |
| MS.gene065863.t1 | AT1G06580 | 22.791 | 215 | 157 | 3 | 90 | 304 | 138 | 343 | 8.15e-11 | 63.2 |
| MS.gene065863.t1 | AT3G07290 | 20.690 | 319 | 191 | 6 | 22 | 291 | 390 | 695 | 8.90e-11 | 63.2 |
| MS.gene065863.t1 | AT1G62910 | 22.727 | 286 | 163 | 6 | 55 | 291 | 131 | 407 | 9.74e-11 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTCTATCATGATAAAAT+TGG | 0.139982 | 2.2:+27118115 | MS.gene065863:CDS |
| GTTGGCTTGTTTGTTAAATC+TGG | 0.157006 | 2.2:+27117521 | MS.gene065863:CDS |
| ATCTTCTTCATCATCTTCTA+TGG | 0.176300 | 2.2:+27117277 | MS.gene065863:CDS |
| GTTCCGCAGCGCTCTCTATC+TGG | 0.234547 | 2.2:+27117394 | MS.gene065863:CDS |
| CAGGTTGAGCATTGCTTATT+AGG | 0.240333 | 2.2:-27118394 | None:intergenic |
| GGCTCTCTGATGGACTATTT+TGG | 0.245917 | 2.2:+27118059 | MS.gene065863:CDS |
| GCAGTAAAGGACTTCGCATT+TGG | 0.316585 | 2.2:-27118254 | None:intergenic |
| TACTTAGATATTACCTCATT+TGG | 0.327256 | 2.2:+27118038 | MS.gene065863:CDS |
| CAGTAAAGGACTTCGCATTT+GGG | 0.338011 | 2.2:-27118253 | None:intergenic |
| TTGTTAACGTCTGTGGTAAA+TGG | 0.342942 | 2.2:+27118371 | MS.gene065863:CDS |
| GAACAAAATTTGTAATTCAT+TGG | 0.344828 | 2.2:-27117233 | None:intergenic |
| TATTGCCACTTACAGTGATA+TGG | 0.352702 | 2.2:+27117881 | MS.gene065863:intron |
| CTTTCTATCATGATAAAATT+GGG | 0.357563 | 2.2:+27118116 | MS.gene065863:CDS |
| GGTTGTACTCAACAGCCTTA+TGG | 0.358829 | 2.2:+27118154 | MS.gene065863:CDS |
| TTTGGTCATGCGTGTGAAAA+TGG | 0.364306 | 2.2:+27118182 | MS.gene065863:CDS |
| TCATGGCATACCCCTTCAAT+AGG | 0.366340 | 2.2:-27117574 | None:intergenic |
| CGTTATGCAATGTCTGTTGT+TGG | 0.372082 | 2.2:+27117503 | MS.gene065863:CDS |
| AACAGCCTTATGGAGGTCTT+TGG | 0.388961 | 2.2:+27118164 | MS.gene065863:CDS |
| TGACTTGATGTCAAAATATC+TGG | 0.392050 | 2.2:-27118015 | None:intergenic |
| ATCCACTCATCAATAATTCA+TGG | 0.399275 | 2.2:+27117933 | MS.gene065863:CDS |
| AACTCCTTCCTCTTCACAAA+AGG | 0.402673 | 2.2:-27117374 | None:intergenic |
| CAGATTTCTTAGATTTGAAA+AGG | 0.428586 | 2.2:+27118286 | MS.gene065863:CDS |
| TTCCTTTGGTTCCACCATCA+AGG | 0.433297 | 2.2:-27118529 | None:intergenic |
| GAACACAAACGTGCCCTTGA+TGG | 0.444045 | 2.2:+27118515 | MS.gene065863:CDS |
| TCTTCTTCATCATCTTCTAT+GGG | 0.450948 | 2.2:+27117278 | MS.gene065863:CDS |
| TACTGTCAATACCCTATTGA+AGG | 0.455845 | 2.2:+27117562 | MS.gene065863:CDS |
| ATTGGGAATACAGCCCAATC+TGG | 0.463417 | 2.2:+27118133 | MS.gene065863:CDS |
| TCCTTTGGTTCCACCATCAA+GGG | 0.467264 | 2.2:-27118528 | None:intergenic |
| TCTGTTAATTACTGCAGTAA+AGG | 0.468872 | 2.2:-27118267 | None:intergenic |
| AGAAACCGAAGGGCTTGTTC+CGG | 0.474472 | 2.2:-27117975 | None:intergenic |
| CAGAAATGAAGGAGTTCAAT+GGG | 0.478009 | 2.2:+27117342 | MS.gene065863:CDS |
| CCACTGCCTTGTTAAGCAAC+CGG | 0.482626 | 2.2:+27117956 | MS.gene065863:CDS |
| GCTGTTGAGTACAACCAGAT+TGG | 0.482656 | 2.2:-27118147 | None:intergenic |
| TACCTCATTTGGCTCTCTGA+TGG | 0.484871 | 2.2:+27118049 | MS.gene065863:CDS |
| CTGTTGAGTACAACCAGATT+GGG | 0.488767 | 2.2:-27118146 | None:intergenic |
| ACAAAGAGTAGTGCTTTCTC+AGG | 0.492053 | 2.2:-27118413 | None:intergenic |
| TTGGCTTGTTTGTTAAATCT+GGG | 0.492169 | 2.2:+27117522 | MS.gene065863:CDS |
| CATGGCATACCCCTTCAATA+GGG | 0.496300 | 2.2:-27117573 | None:intergenic |
| ACAGAAATGAAGGAGTTCAA+TGG | 0.498224 | 2.2:+27117341 | MS.gene065863:CDS |
| TTCCGCAGCGCTCTCTATCT+GGG | 0.500229 | 2.2:+27117395 | MS.gene065863:CDS |
| GAAGAAACGAACAGAAATGA+AGG | 0.507965 | 2.2:+27117331 | MS.gene065863:CDS |
| AGCAACCGGAACAAGCCCTT+CGG | 0.509997 | 2.2:+27117970 | MS.gene065863:CDS |
| CTTGTTCCGGTTGCTTAACA+AGG | 0.514050 | 2.2:-27117962 | None:intergenic |
| ACTCCTTCCTCTTCACAAAA+GGG | 0.531722 | 2.2:-27117373 | None:intergenic |
| GCCCTTGATGGTGGAACCAA+AGG | 0.542001 | 2.2:+27118527 | MS.gene065863:CDS |
| CACAAACGTGCCCTTGATGG+TGG | 0.551888 | 2.2:+27118518 | MS.gene065863:CDS |
| TCAGAAATTGTTAACGTCTG+TGG | 0.560139 | 2.2:+27118364 | MS.gene065863:CDS |
| CCGGTTGCTTAACAAGGCAG+TGG | 0.567872 | 2.2:-27117956 | None:intergenic |
| ACTGTCAATACCCTATTGAA+GGG | 0.569698 | 2.2:+27117563 | MS.gene065863:CDS |
| TGGTGGAACCAAAGGAAAAG+AGG | 0.572747 | 2.2:+27118535 | MS.gene065863:CDS |
| GTGAAAATGGTCGAAATCCG+TGG | 0.574926 | 2.2:+27118195 | MS.gene065863:CDS |
| TGATGAGTGGATGAAATAAG+TGG | 0.575654 | 2.2:-27117922 | None:intergenic |
| CATGACCAAAGACCTCCATA+AGG | 0.612208 | 2.2:-27118169 | None:intergenic |
| GGTGGAACCAAAGGAAAAGA+GGG | 0.613088 | 2.2:+27118536 | MS.gene065863:CDS |
| AAGTGTTGGAAGGATTGAAG+AGG | 0.617326 | 2.2:+27118082 | MS.gene065863:CDS |
| GTCCATCAGAGAGCCAAATG+AGG | 0.621267 | 2.2:-27118051 | None:intergenic |
| AGTAAAGGACTTCGCATTTG+GGG | 0.623142 | 2.2:-27118252 | None:intergenic |
| AACAGTATAACACGGAAGGT+CGG | 0.624195 | 2.2:-27118465 | None:intergenic |
| CAAGCTTTAAAAGAAACCGA+AGG | 0.627260 | 2.2:-27117986 | None:intergenic |
| TGAAAACAGTATAACACGGA+AGG | 0.627817 | 2.2:-27118469 | None:intergenic |
| AAAACATAGAAAAGCATCCA+CGG | 0.628919 | 2.2:-27118212 | None:intergenic |
| AAGCTTTAAAAGAAACCGAA+GGG | 0.631235 | 2.2:-27117985 | None:intergenic |
| GGCCATGAATTATTGATGAG+TGG | 0.640779 | 2.2:-27117935 | None:intergenic |
| CTCATGAAAACAGTATAACA+CGG | 0.658543 | 2.2:-27118473 | None:intergenic |
| CTGTCAATACCCTATTGAAG+GGG | 0.658952 | 2.2:+27117564 | MS.gene065863:CDS |
| TGTACTCAACAGCCTTATGG+AGG | 0.660545 | 2.2:+27118157 | MS.gene065863:CDS |
| GATGAGTGGATGAAATAAGT+GGG | 0.663581 | 2.2:-27117921 | None:intergenic |
| TACCCAGATAGAGAGCGCTG+CGG | 0.799610 | 2.2:-27117397 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTAAATGATAATATCTT+AGG | + | chr2.2:27117786-27117805 | MS.gene065863:intron | 15.0% |
| !! | ACTTTCTATCATGATAAAAT+TGG | + | chr2.2:27118115-27118134 | MS.gene065863:CDS | 20.0% |
| !! | AGTTAAATGAAATTTCCTTT+GGG | + | chr2.2:27117654-27117673 | MS.gene065863:intron | 20.0% |
| !! | CTTTCTATCATGATAAAATT+GGG | + | chr2.2:27118116-27118135 | MS.gene065863:CDS | 20.0% |
| ! | CAAAGGAAATTTCATTTAAC+TGG | - | chr2.2:27117655-27117674 | None:intergenic | 25.0% |
| ! | CAGATTTCTTAGATTTGAAA+AGG | + | chr2.2:27118286-27118305 | MS.gene065863:CDS | 25.0% |
| ! | CAGTTAAATGAAATTTCCTT+TGG | + | chr2.2:27117653-27117672 | MS.gene065863:intron | 25.0% |
| ! | GTCTTTGCAACTTAAATTTA+GGG | + | chr2.2:27117477-27117496 | MS.gene065863:intron | 25.0% |
| ! | GTTCATAGAGAAAAAGTTTA+AGG | + | chr2.2:27118442-27118461 | MS.gene065863:CDS | 25.0% |
| ! | TACTTAGATATTACCTCATT+TGG | + | chr2.2:27118038-27118057 | MS.gene065863:CDS | 25.0% |
| !!! | AATTTTGTTCGTCATTTTAC+AGG | + | chr2.2:27117246-27117265 | MS.gene065863:CDS | 25.0% |
| !!! | ATTTTGTTCGTCATTTTACA+GGG | + | chr2.2:27117247-27117266 | MS.gene065863:CDS | 25.0% |
| !!! | CTAAATTTAAGTTGCAAAGA+CGG | - | chr2.2:27117478-27117497 | None:intergenic | 25.0% |
| AGTAGTATACATTACCACAT+CGG | - | chr2.2:27117820-27117839 | None:intergenic | 30.0% | |
| ATCCACTCATCAATAATTCA+TGG | + | chr2.2:27117933-27117952 | MS.gene065863:CDS | 30.0% | |
| ATCTTCTTCATCATCTTCTA+TGG | + | chr2.2:27117277-27117296 | MS.gene065863:CDS | 30.0% | |
| ATGAATGCAAAACCAAAACA+AGG | + | chr2.2:27117593-27117612 | MS.gene065863:intron | 30.0% | |
| CGTCTTTGCAACTTAAATTT+AGG | + | chr2.2:27117476-27117495 | MS.gene065863:intron | 30.0% | |
| CTCATGAAAACAGTATAACA+CGG | - | chr2.2:27118476-27118495 | None:intergenic | 30.0% | |
| TCTGTTAATTACTGCAGTAA+AGG | - | chr2.2:27118270-27118289 | None:intergenic | 30.0% | |
| TCTTCTTCATCATCTTCTAT+GGG | + | chr2.2:27117278-27117297 | MS.gene065863:CDS | 30.0% | |
| TGACTTGATGTCAAAATATC+TGG | - | chr2.2:27118018-27118037 | None:intergenic | 30.0% | |
| TGATAATATCTTAGGTGTCA+AGG | + | chr2.2:27117794-27117813 | MS.gene065863:intron | 30.0% | |
| ! | GGATGCTTTTCTATGTTTTA+GGG | + | chr2.2:27118216-27118235 | MS.gene065863:CDS | 30.0% |
| ! | GTGTTATACTGTTTTCATGA+GGG | + | chr2.2:27118475-27118494 | MS.gene065863:CDS | 30.0% |
| ! | TGGATGCTTTTCTATGTTTT+AGG | + | chr2.2:27118215-27118234 | MS.gene065863:CDS | 30.0% |
| !! | AAAACATAGAAAAGCATCCA+CGG | - | chr2.2:27118215-27118234 | None:intergenic | 30.0% |
| !! | AAGCTTTAAAAGAAACCGAA+GGG | - | chr2.2:27117988-27118007 | None:intergenic | 30.0% |
| !! | TTGGCTTGTTTGTTAAATCT+GGG | + | chr2.2:27117522-27117541 | MS.gene065863:CDS | 30.0% |
| !!! | TTGTTTTGGTTTTGCATTCA+TGG | - | chr2.2:27117594-27117613 | None:intergenic | 30.0% |
| AAGATCACCTAACATGCATA+TGG | - | chr2.2:27117693-27117712 | None:intergenic | 35.0% | |
| ACAGAAATGAAGGAGTTCAA+TGG | + | chr2.2:27117341-27117360 | MS.gene065863:CDS | 35.0% | |
| ACTGTCAATACCCTATTGAA+GGG | + | chr2.2:27117563-27117582 | MS.gene065863:CDS | 35.0% | |
| ATAGATGCATTGTGCAAACA+CGG | + | chr2.2:27117843-27117862 | MS.gene065863:intron | 35.0% | |
| CAGAAATGAAGGAGTTCAAT+GGG | + | chr2.2:27117342-27117361 | MS.gene065863:CDS | 35.0% | |
| CTTCAATCCATATGCATGTT+AGG | + | chr2.2:27117683-27117702 | MS.gene065863:intron | 35.0% | |
| GAAGAAACGAACAGAAATGA+AGG | + | chr2.2:27117331-27117350 | MS.gene065863:CDS | 35.0% | |
| GATGAGTGGATGAAATAAGT+GGG | - | chr2.2:27117924-27117943 | None:intergenic | 35.0% | |
| GTTAACCATATCACTGTAAG+TGG | - | chr2.2:27117889-27117908 | None:intergenic | 35.0% | |
| TACTGTCAATACCCTATTGA+AGG | + | chr2.2:27117562-27117581 | MS.gene065863:CDS | 35.0% | |
| TCAGAAATTGTTAACGTCTG+TGG | + | chr2.2:27118364-27118383 | MS.gene065863:CDS | 35.0% | |
| TGAAAACAGTATAACACGGA+AGG | - | chr2.2:27118472-27118491 | None:intergenic | 35.0% | |
| TGATGAGTGGATGAAATAAG+TGG | - | chr2.2:27117925-27117944 | None:intergenic | 35.0% | |
| TTGTTAACGTCTGTGGTAAA+TGG | + | chr2.2:27118371-27118390 | MS.gene065863:CDS | 35.0% | |
| ! | AACAAAACCCTCTTTTCCTT+TGG | - | chr2.2:27118546-27118565 | None:intergenic | 35.0% |
| ! | CGTGTTATACTGTTTTCATG+AGG | + | chr2.2:27118474-27118493 | MS.gene065863:CDS | 35.0% |
| ! | CTAACATGCATATGGATTGA+AGG | - | chr2.2:27117685-27117704 | None:intergenic | 35.0% |
| ! | TATTGCCACTTACAGTGATA+TGG | + | chr2.2:27117881-27117900 | MS.gene065863:intron | 35.0% |
| !! | ATGGACTATTTTGGAAGTGT+TGG | + | chr2.2:27118068-27118087 | MS.gene065863:CDS | 35.0% |
| !! | CAAGCTTTAAAAGAAACCGA+AGG | - | chr2.2:27117989-27118008 | None:intergenic | 35.0% |
| !! | GCAAACTCTAAACCTTGTTT+TGG | - | chr2.2:27117608-27117627 | None:intergenic | 35.0% |
| !! | GTTGGCTTGTTTGTTAAATC+TGG | + | chr2.2:27117521-27117540 | MS.gene065863:CDS | 35.0% |
| !!! | ACTATTTTGGAAGTGTTGGA+AGG | + | chr2.2:27118072-27118091 | MS.gene065863:CDS | 35.0% |
| AACAGTATAACACGGAAGGT+CGG | - | chr2.2:27118468-27118487 | None:intergenic | 40.0% | |
| AACTCCTTCCTCTTCACAAA+AGG | - | chr2.2:27117377-27117396 | None:intergenic | 40.0% | |
| ACAAAGAGTAGTGCTTTCTC+AGG | - | chr2.2:27118416-27118435 | None:intergenic | 40.0% | |
| ACTCCTTCCTCTTCACAAAA+GGG | - | chr2.2:27117376-27117395 | None:intergenic | 40.0% | |
| AGTAAAGGACTTCGCATTTG+GGG | - | chr2.2:27118255-27118274 | None:intergenic | 40.0% | |
| CAGTAAAGGACTTCGCATTT+GGG | - | chr2.2:27118256-27118275 | None:intergenic | 40.0% | |
| CGTTATGCAATGTCTGTTGT+TGG | + | chr2.2:27117503-27117522 | MS.gene065863:CDS | 40.0% | |
| CTGTCAATACCCTATTGAAG+GGG | + | chr2.2:27117564-27117583 | MS.gene065863:CDS | 40.0% | |
| CTGTTGAGTACAACCAGATT+GGG | - | chr2.2:27118149-27118168 | None:intergenic | 40.0% | |
| GGATTGAAGGATTATCCCAA+AGG | - | chr2.2:27117672-27117691 | None:intergenic | 40.0% | |
| GGCCATGAATTATTGATGAG+TGG | - | chr2.2:27117938-27117957 | None:intergenic | 40.0% | |
| TATTGCGCAGTATGCATGTT+TGG | + | chr2.2:27117729-27117748 | MS.gene065863:intron | 40.0% | |
| TGCATGTTAGGTGATCTTAG+TGG | + | chr2.2:27117695-27117714 | MS.gene065863:intron | 40.0% | |
| TTTGGTCATGCGTGTGAAAA+TGG | + | chr2.2:27118182-27118201 | MS.gene065863:CDS | 40.0% | |
| ! | CAGGTTGAGCATTGCTTATT+AGG | - | chr2.2:27118397-27118416 | None:intergenic | 40.0% |
| ! | TACTACACCCTTTTGTGAAG+AGG | + | chr2.2:27117366-27117385 | MS.gene065863:CDS | 40.0% |
| ! | TGCATGTTTGGTGATCTTAG+TGG | + | chr2.2:27117741-27117760 | MS.gene065863:intron | 40.0% |
| !! | AAGTGTTGGAAGGATTGAAG+AGG | + | chr2.2:27118082-27118101 | MS.gene065863:CDS | 40.0% |
| !!! | TTCATGAGGGCTTGTTTTGA+AGG | + | chr2.2:27118488-27118507 | MS.gene065863:CDS | 40.0% |
| ATTGGGAATACAGCCCAATC+TGG | + | chr2.2:27118133-27118152 | MS.gene065863:CDS | 45.0% | |
| CATGACCAAAGACCTCCATA+AGG | - | chr2.2:27118172-27118191 | None:intergenic | 45.0% | |
| CATGGCATACCCCTTCAATA+GGG | - | chr2.2:27117576-27117595 | None:intergenic | 45.0% | |
| CTTGTTCCGGTTGCTTAACA+AGG | - | chr2.2:27117965-27117984 | None:intergenic | 45.0% | |
| GCAGTAAAGGACTTCGCATT+TGG | - | chr2.2:27118257-27118276 | None:intergenic | 45.0% | |
| GCTGTTGAGTACAACCAGAT+TGG | - | chr2.2:27118150-27118169 | None:intergenic | 45.0% | |
| GGTGGAACCAAAGGAAAAGA+GGG | + | chr2.2:27118536-27118555 | MS.gene065863:CDS | 45.0% | |
| GGTTGTACTCAACAGCCTTA+TGG | + | chr2.2:27118154-27118173 | MS.gene065863:CDS | 45.0% | |
| GTGAAAATGGTCGAAATCCG+TGG | + | chr2.2:27118195-27118214 | MS.gene065863:CDS | 45.0% | |
| TCATGGCATACCCCTTCAAT+AGG | - | chr2.2:27117577-27117596 | None:intergenic | 45.0% | |
| TGGTGGAACCAAAGGAAAAG+AGG | + | chr2.2:27118535-27118554 | MS.gene065863:CDS | 45.0% | |
| ! | AACAGCCTTATGGAGGTCTT+TGG | + | chr2.2:27118164-27118183 | MS.gene065863:CDS | 45.0% |
| ! | ACACCCTTTTGTGAAGAGGA+AGG | + | chr2.2:27117370-27117389 | MS.gene065863:CDS | 45.0% |
| ! | TCCTTTGGTTCCACCATCAA+GGG | - | chr2.2:27118531-27118550 | None:intergenic | 45.0% |
| ! | TGTACTCAACAGCCTTATGG+AGG | + | chr2.2:27118157-27118176 | MS.gene065863:CDS | 45.0% |
| ! | TTCCTTTGGTTCCACCATCA+AGG | - | chr2.2:27118532-27118551 | None:intergenic | 45.0% |
| !! | AGAGTTTGCTGCCAAGTTAC+AGG | + | chr2.2:27117619-27117638 | MS.gene065863:intron | 45.0% |
| !! | GAGTTTGCTGCCAAGTTACA+GGG | + | chr2.2:27117620-27117639 | MS.gene065863:intron | 45.0% |
| !! | TACCTCATTTGGCTCTCTGA+TGG | + | chr2.2:27118049-27118068 | MS.gene065863:CDS | 45.0% |
| !!! | GGCTCTCTGATGGACTATTT+TGG | + | chr2.2:27118059-27118078 | MS.gene065863:CDS | 45.0% |
| CTGCCAAGTTACAGGGTGTA+GGG | + | chr2.2:27117627-27117646 | MS.gene065863:intron | 50.0% | |
| GAACACAAACGTGCCCTTGA+TGG | + | chr2.2:27118515-27118534 | MS.gene065863:CDS | 50.0% | |
| GAACCCTACACCCTGTAACT+TGG | - | chr2.2:27117633-27117652 | None:intergenic | 50.0% | |
| GTCCATCAGAGAGCCAAATG+AGG | - | chr2.2:27118054-27118073 | None:intergenic | 50.0% | |
| ! | AGAAACCGAAGGGCTTGTTC+CGG | - | chr2.2:27117978-27117997 | None:intergenic | 50.0% |
| ! | CCACTGCCTTGTTAAGCAAC+CGG | + | chr2.2:27117956-27117975 | MS.gene065863:CDS | 50.0% |
| AGCAACCGGAACAAGCCCTT+CGG | + | chr2.2:27117970-27117989 | MS.gene065863:CDS | 55.0% | |
| CACAAACGTGCCCTTGATGG+TGG | + | chr2.2:27118518-27118537 | MS.gene065863:CDS | 55.0% | |
| CCGGTTGCTTAACAAGGCAG+TGG | - | chr2.2:27117959-27117978 | None:intergenic | 55.0% | |
| CTTAGGTGTCAAGGCCGATG+TGG | + | chr2.2:27117803-27117822 | MS.gene065863:intron | 55.0% | |
| GCTGCCAAGTTACAGGGTGT+AGG | + | chr2.2:27117626-27117645 | MS.gene065863:intron | 55.0% | |
| TTCCGCAGCGCTCTCTATCT+GGG | + | chr2.2:27117395-27117414 | MS.gene065863:CDS | 55.0% | |
| !! | GCCCTTGATGGTGGAACCAA+AGG | + | chr2.2:27118527-27118546 | MS.gene065863:CDS | 55.0% |
| !! | TACCCAGATAGAGAGCGCTG+CGG | - | chr2.2:27117400-27117419 | None:intergenic | 55.0% |
| GCAGCGCTCTCTATCTGGGT+AGG | + | chr2.2:27117399-27117418 | MS.gene065863:intron | 60.0% | |
| GTTCCGCAGCGCTCTCTATC+TGG | + | chr2.2:27117394-27117413 | MS.gene065863:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 27117236 | 27118577 | 27117236 | ID=MS.gene065863 |
| chr2.2 | mRNA | 27117236 | 27118577 | 27117236 | ID=MS.gene065863.t1;Parent=MS.gene065863 |
| chr2.2 | exon | 27117236 | 27117416 | 27117236 | ID=MS.gene065863.t1.exon1;Parent=MS.gene065863.t1 |
| chr2.2 | CDS | 27117236 | 27117416 | 27117236 | ID=cds.MS.gene065863.t1;Parent=MS.gene065863.t1 |
| chr2.2 | exon | 27117498 | 27117585 | 27117498 | ID=MS.gene065863.t1.exon2;Parent=MS.gene065863.t1 |
| chr2.2 | CDS | 27117498 | 27117585 | 27117498 | ID=cds.MS.gene065863.t1;Parent=MS.gene065863.t1 |
| chr2.2 | exon | 27117896 | 27118577 | 27117896 | ID=MS.gene065863.t1.exon3;Parent=MS.gene065863.t1 |
| chr2.2 | CDS | 27117896 | 27118577 | 27117896 | ID=cds.MS.gene065863.t1;Parent=MS.gene065863.t1 |
| Gene Sequence |
| Protein sequence |
