Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055875.t1 | TEY92752.1 | 52.5 | 341 | 141 | 7 | 1 | 325 | 8 | 343 | 1.10E-91 | 347.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055875.t1 | Q9Y263 | 23.6 | 347 | 250 | 8 | 6 | 344 | 7 | 346 | 4.1e-12 | 73.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055875.t1 | A0A4D9C3L5 | 52.5 | 341 | 141 | 7 | 1 | 325 | 8 | 343 | 7.6e-92 | 347.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene055875 | 0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene055875 | 0.822245 | 2.63E-53 | -1.69E-46 |
| MS.gene051147 | MS.gene055875 | 0.838284 | 3.15E-57 | -1.69E-46 |
| MS.gene053512 | MS.gene055875 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene055875 | 0.829164 | 6.00E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene056174 | 0.802755 | 4.83E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene057656 | 0.898959 | 3.18E-77 | -1.69E-46 |
| MS.gene055875 | MS.gene057755 | 0.911529 | 5.48E-83 | -1.69E-46 |
| MS.gene055875 | MS.gene057756 | 0.803674 | 3.12E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene057757 | 0.832166 | 1.10E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene057758 | 0.829026 | 6.48E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene057760 | 0.869583 | 2.78E-66 | -1.69E-46 |
| MS.gene055875 | MS.gene057763 | 0.815662 | 8.24E-52 | -1.69E-46 |
| MS.gene055875 | MS.gene058010 | 0.837113 | 6.29E-57 | -1.69E-46 |
| MS.gene055875 | MS.gene058515 | 0.804991 | 1.66E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene059272 | 0.807673 | 4.51E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene060011 | 0.808881 | 2.49E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene060167 | 0.948672 | 5.92E-107 | -1.69E-46 |
| MS.gene055875 | MS.gene06052 | 0.813741 | 2.19E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene063491 | 0.806509 | 7.95E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene065863 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene066436 | 0.815513 | 8.90E-52 | -1.69E-46 |
| MS.gene055875 | MS.gene06698 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene067473 | 0.827104 | 1.88E-54 | -1.69E-46 |
| MS.gene055875 | MS.gene068010 | 0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene068924 | 0.802812 | 4.70E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene06911 | 0.8021 | 6.58E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene069554 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene055875 | MS.gene071033 | 0.826699 | 2.35E-54 | -1.69E-46 |
| MS.gene055875 | MS.gene07532 | 0.801642 | 8.18E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene20558 | 0.834163 | 3.51E-56 | -1.69E-46 |
| MS.gene055875 | MS.gene22091 | 0.806671 | 7.35E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene23656 | 0.828562 | 8.39E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene28659 | 0.811503 | 6.78E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene31231 | 0.82113 | 4.76E-53 | -1.69E-46 |
| MS.gene055875 | MS.gene31283 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene33624 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene34667 | 0.829762 | 4.29E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene34700 | 0.886671 | 2.79E-72 | -1.69E-46 |
| MS.gene055875 | MS.gene46250 | 0.812613 | 3.88E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene48704 | 0.803546 | 3.31E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene51139 | 0.832537 | 8.93E-56 | -1.69E-46 |
| MS.gene055875 | MS.gene51326 | 0.804461 | 2.14E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene52126 | 0.831658 | 1.47E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene52134 | 0.810641 | 1.04E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene52525 | 0.83661 | 8.46E-57 | -1.69E-46 |
| MS.gene055875 | MS.gene53064 | 0.838382 | 2.97E-57 | -1.69E-46 |
| MS.gene055875 | MS.gene53786 | 0.81085 | 9.39E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene54564 | 0.826705 | 2.34E-54 | -1.69E-46 |
| MS.gene055875 | MS.gene55718 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene58638 | 0.807662 | 4.53E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene60903 | 0.813089 | 3.05E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene61209 | 0.803235 | 3.84E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene64567 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene67220 | 0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene73332 | 0.813454 | 2.54E-51 | -1.69E-46 |
| MS.gene055875 | MS.gene77149 | 0.81861 | 1.79E-52 | -1.69E-46 |
| MS.gene055875 | MS.gene77220 | 0.801959 | 7.04E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene84454 | 0.800684 | 1.28E-48 | -1.69E-46 |
| MS.gene055875 | MS.gene88112 | 0.805514 | 1.29E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene90022 | 0.817182 | 3.77E-52 | -1.69E-46 |
| MS.gene055875 | MS.gene90525 | 0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene90823 | 0.821353 | 4.22E-53 | -1.69E-46 |
| MS.gene055875 | MS.gene93682 | 0.803523 | 3.35E-49 | -1.69E-46 |
| MS.gene055875 | MS.gene95981 | 0.810585 | 1.07E-50 | -1.69E-46 |
| MS.gene055875 | MS.gene98087 | 0.831599 | 1.52E-55 | -1.69E-46 |
| MS.gene055875 | MS.gene98088 | 0.847341 | 1.23E-59 | -1.69E-46 |
| MS.gene055875 | MS.gene98774 | 0.832631 | 8.47E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055875.t1 | MTR_4g069090 | 61.443 | 402 | 99 | 7 | 1 | 356 | 3 | 394 | 5.05e-158 | 462 |
| MS.gene055875.t1 | MTR_4g119620 | 30.620 | 258 | 147 | 14 | 20 | 260 | 81 | 323 | 7.12e-19 | 87.0 |
| MS.gene055875.t1 | MTR_4g011950 | 25.564 | 266 | 166 | 11 | 50 | 296 | 4 | 256 | 4.59e-11 | 65.1 |
| MS.gene055875.t1 | MTR_2g102277 | 25.940 | 266 | 165 | 11 | 50 | 296 | 4 | 256 | 7.85e-11 | 64.3 |
| MS.gene055875.t1 | MTR_2g102277 | 25.940 | 266 | 165 | 11 | 50 | 296 | 4 | 256 | 7.86e-11 | 64.3 |
| MS.gene055875.t1 | MTR_2g436510 | 22.642 | 265 | 184 | 11 | 55 | 308 | 164 | 418 | 9.11e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055875.t1 | AT3G18860 | 53.687 | 339 | 138 | 8 | 1 | 331 | 5 | 332 | 8.09e-115 | 351 |
| MS.gene055875.t1 | AT3G18860 | 53.687 | 339 | 138 | 8 | 1 | 331 | 5 | 332 | 8.26e-115 | 351 |
| MS.gene055875.t1 | AT3G49660 | 30.705 | 241 | 143 | 12 | 32 | 260 | 86 | 314 | 1.24e-20 | 91.7 |
| MS.gene055875.t1 | AT1G79990 | 25.940 | 266 | 165 | 11 | 50 | 296 | 4 | 256 | 2.56e-12 | 68.9 |
| MS.gene055875.t1 | AT1G79990 | 25.940 | 266 | 165 | 11 | 50 | 296 | 4 | 256 | 2.76e-12 | 68.9 |
Find 89 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGGGATACAAAATTTA+TGG | 0.163017 | 8.3:-42739195 | MS.gene055875:CDS |
| ACTACAGTTCTCTCAGATTA+TGG | 0.178467 | 8.3:-42739986 | MS.gene055875:intron |
| TTGGCTGCGATGTCTGATTT+TGG | 0.214527 | 8.3:-42740132 | MS.gene055875:CDS |
| TTGAAAAGCGGTGGTGTTTC+TGG | 0.222387 | 8.3:-42741502 | MS.gene055875:CDS |
| AGAGTCCCTTGAACCTAAAA+TGG | 0.235582 | 8.3:+42740561 | None:intergenic |
| ATTTGAAGAGGTGGAGTAAT+TGG | 0.238721 | 8.3:-42740820 | MS.gene055875:CDS |
| CTCAGATTATGGGCATTAAA+TGG | 0.298081 | 8.3:-42739975 | MS.gene055875:CDS |
| TGAATAATGCTGTGGTTGTT+TGG | 0.299775 | 8.3:-42741474 | MS.gene055875:CDS |
| GGCGGAGTGCACAGCGTAAT+TGG | 0.307415 | 8.3:+42741707 | None:intergenic |
| CTTGTTTCATCTTCTATTGA+TGG | 0.317174 | 8.3:-42741373 | MS.gene055875:CDS |
| GATGGTGTTCAGCATGATTA+TGG | 0.327272 | 8.3:-42738857 | MS.gene055875:intron |
| AGCTTTATAACTGCTTGAAT+TGG | 0.341084 | 8.3:+42740755 | None:intergenic |
| CCGATGGAGTTGTACGCATT+TGG | 0.342372 | 8.3:-42739145 | MS.gene055875:CDS |
| GTGATTGATACGAGTGGATT+TGG | 0.349177 | 8.3:-42738746 | MS.gene055875:CDS |
| GGGACTCTTGTTTAAAGATC+TGG | 0.355126 | 8.3:-42740546 | MS.gene055875:CDS |
| CCCACAGGAGAGCTTGTTAC+AGG | 0.356136 | 8.3:-42740731 | MS.gene055875:intron |
| CTACAGTTCTCTCAGATTAT+GGG | 0.367037 | 8.3:-42739985 | MS.gene055875:intron |
| ATACAAAATTTATGGAAAAC+GGG | 0.370087 | 8.3:-42739187 | MS.gene055875:CDS |
| GTTACTGGTATTGTGGTTGA+TGG | 0.375152 | 8.3:-42741403 | MS.gene055875:CDS |
| GATCATGAATCGGAGGTTAC+TGG | 0.380364 | 8.3:-42741418 | MS.gene055875:CDS |
| TTTGTACCTGATTTGTTGAA+TGG | 0.411582 | 8.3:+42738703 | None:intergenic |
| CAGTGGTAGCAAAGATCGTT+TGG | 0.416650 | 8.3:-42739877 | MS.gene055875:CDS |
| GAATAATGCTGTGGTTGTTT+GGG | 0.416958 | 8.3:-42741473 | MS.gene055875:CDS |
| GATACAAAATTTATGGAAAA+CGG | 0.420447 | 8.3:-42739188 | MS.gene055875:CDS |
| AAGATTAACAAAGTTGCTGT+TGG | 0.428899 | 8.3:-42738908 | MS.gene055875:CDS |
| TTACTGGTATTGTGGTTGAT+GGG | 0.435643 | 8.3:-42741402 | MS.gene055875:CDS |
| GTTCGAATTGCACGGAGACA+TGG | 0.436264 | 8.3:-42740793 | MS.gene055875:CDS |
| CTGAACAAACAGTTGCAGTA+TGG | 0.447329 | 8.3:+42739928 | None:intergenic |
| TCAGTTGATTCACATGCATC+AGG | 0.449667 | 8.3:-42739909 | MS.gene055875:CDS |
| ACCCATCATGGGATGCAGAT+AGG | 0.452110 | 8.3:+42740106 | None:intergenic |
| TTGTTTCATCTTCTATTGAT+GGG | 0.457455 | 8.3:-42741372 | MS.gene055875:intron |
| AGTGGATTTGGTAGGCAATA+CGG | 0.465499 | 8.3:-42738734 | MS.gene055875:CDS |
| AAGTTGCCATTCAACAAATC+AGG | 0.472764 | 8.3:-42738709 | MS.gene055875:intron |
| TCCTATCTGCATCCCATGAT+GGG | 0.476764 | 8.3:-42740107 | MS.gene055875:intron |
| TACTGGTATTGTGGTTGATG+GGG | 0.482696 | 8.3:-42741401 | MS.gene055875:CDS |
| TTCGGTGGAATCCATGATAT+AGG | 0.482787 | 8.3:+42741532 | None:intergenic |
| TACAGATACTGTTTGTGGCT+TGG | 0.485506 | 8.3:-42740151 | MS.gene055875:intron |
| AGAAATGAACCCACCCATCA+TGG | 0.491698 | 8.3:+42740094 | None:intergenic |
| CACGATGATGCTGAAGTTCG+CGG | 0.491811 | 8.3:-42741685 | MS.gene055875:CDS |
| TCCGCCGTTGTTGCCGCAGA+TGG | 0.491839 | 8.3:+42741657 | None:intergenic |
| CAACGCTTGACAAATCGATT+AGG | 0.494015 | 8.3:-42741624 | MS.gene055875:CDS |
| GTGGATTTGGTAGGCAATAC+GGG | 0.495201 | 8.3:-42738733 | MS.gene055875:CDS |
| GAGTCCCTTGAACCTAAAAT+GGG | 0.501006 | 8.3:+42740562 | None:intergenic |
| GCTTCGTCAGACCTATATCA+TGG | 0.522835 | 8.3:-42741543 | MS.gene055875:CDS |
| TAACAAAGTTGCTGTTGGAT+CGG | 0.524007 | 8.3:-42738903 | MS.gene055875:CDS |
| GTTGTTTGGGACGTGGATAG+TGG | 0.528762 | 8.3:-42741460 | MS.gene055875:CDS |
| GGAGACATGGGCGGCTCACG+AGG | 0.534589 | 8.3:-42740780 | MS.gene055875:CDS |
| TCAAATCGCCCTTCCTTCGA+TGG | 0.536762 | 8.3:-42738875 | MS.gene055875:CDS |
| TGTGCAGTAATTTGAAGAGG+TGG | 0.537765 | 8.3:-42740829 | MS.gene055875:intron |
| ATCCTATCTGCATCCCATGA+TGG | 0.540343 | 8.3:-42740108 | MS.gene055875:CDS |
| TGCTGTGGTTGTTTGGGACG+TGG | 0.540919 | 8.3:-42741467 | MS.gene055875:CDS |
| TTGGAATTGTTCGAATTGCA+CGG | 0.545602 | 8.3:-42740801 | MS.gene055875:CDS |
| ACCTGTAACAAGCTCTCCTG+TGG | 0.546432 | 8.3:+42740730 | None:intergenic |
| GAATGTACAGATACTGTTTG+TGG | 0.547131 | 8.3:-42740156 | MS.gene055875:intron |
| CATGAGATAATGAACATGTC+TGG | 0.551794 | 8.3:-42739951 | MS.gene055875:CDS |
| TGCTGAACACCATCGAAGGA+AGG | 0.554944 | 8.3:+42738866 | None:intergenic |
| TTGATACGAGTGGATTTGGT+AGG | 0.557534 | 8.3:-42738742 | MS.gene055875:CDS |
| GTTCAGAGCATAGAGCATCC+TGG | 0.560137 | 8.3:-42739221 | MS.gene055875:CDS |
| ATTACCATCTGCGGCAACAA+CGG | 0.565704 | 8.3:-42741661 | MS.gene055875:CDS |
| TTCGAATTGCACGGAGACAT+GGG | 0.566298 | 8.3:-42740792 | MS.gene055875:CDS |
| GAAGACACTAGATCATGAAT+CGG | 0.571511 | 8.3:-42741428 | MS.gene055875:CDS |
| GAAATGAACCCACCCATCAT+GGG | 0.575781 | 8.3:+42740095 | None:intergenic |
| TTTGTATCCCAAACAAAACC+AGG | 0.581250 | 8.3:+42739203 | None:intergenic |
| GCTGAACACCATCGAAGGAA+GGG | 0.586274 | 8.3:+42738867 | None:intergenic |
| TTGACAAATCGATTAGGCAT+TGG | 0.586483 | 8.3:-42741618 | MS.gene055875:CDS |
| AATCGATTTGTCAAGCGTTG+AGG | 0.588590 | 8.3:+42741627 | None:intergenic |
| TCTTGTGCAGTAATTTGAAG+AGG | 0.591310 | 8.3:-42740832 | MS.gene055875:intron |
| TGGTTGTGTGAATAATGCTG+TGG | 0.608311 | 8.3:-42741482 | MS.gene055875:CDS |
| ACCATCTGCGGCAACAACGG+CGG | 0.609884 | 8.3:-42741658 | MS.gene055875:CDS |
| TGTATAAATCAAGTTCTCGC+TGG | 0.611367 | 8.3:+42739096 | None:intergenic |
| ATCATGCTGAACACCATCGA+AGG | 0.614724 | 8.3:+42738862 | None:intergenic |
| ATCGGAGGTTACTGGTATTG+TGG | 0.622916 | 8.3:-42741410 | MS.gene055875:CDS |
| CCAAATGCGTACAACTCCAT+CGG | 0.622939 | 8.3:+42739145 | None:intergenic |
| CCTGTAACAAGCTCTCCTGT+GGG | 0.625764 | 8.3:+42740731 | None:intergenic |
| TATTCAGTGATTGATACGAG+TGG | 0.626968 | 8.3:-42738752 | MS.gene055875:intron |
| AACCCTACTTTGAAAAGCGG+TGG | 0.631203 | 8.3:-42741511 | MS.gene055875:CDS |
| TCTTGTTTAAAGATCTGGAA+GGG | 0.634251 | 8.3:-42740541 | MS.gene055875:CDS |
| ATTGTGACAGCATGTTCCGA+TGG | 0.634535 | 8.3:-42739161 | MS.gene055875:CDS |
| GACACTAGATCATGAATCGG+AGG | 0.635591 | 8.3:-42741425 | MS.gene055875:CDS |
| GCAGTTATAAAGCTACCCAC+AGG | 0.640686 | 8.3:-42740746 | MS.gene055875:CDS |
| GCATCAGGACTTATTGTCAG+TGG | 0.647307 | 8.3:-42739894 | MS.gene055875:CDS |
| CCGAACCCTACTTTGAAAAG+CGG | 0.648212 | 8.3:-42741514 | MS.gene055875:CDS |
| TACAAAATTTATGGAAAACG+GGG | 0.660584 | 8.3:-42739186 | MS.gene055875:CDS |
| GAGACATGGGCGGCTCACGA+GGG | 0.670094 | 8.3:-42740779 | MS.gene055875:CDS |
| CTCTTGTTTAAAGATCTGGA+AGG | 0.682450 | 8.3:-42740542 | MS.gene055875:CDS |
| CGCGAACTTCAGCATCATCG+TGG | 0.689443 | 8.3:+42741686 | None:intergenic |
| GAACTTCAGCATCATCGTGG+CGG | 0.698609 | 8.3:+42741689 | None:intergenic |
| GTTCGCGGAATTACCATCTG+CGG | 0.708970 | 8.3:-42741670 | MS.gene055875:CDS |
| GAATTGCACGGAGACATGGG+CGG | 0.723851 | 8.3:-42740789 | MS.gene055875:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTATTAATTCATATTAAT+AGG | + | chr8.3:42739738-42739757 | None:intergenic | 10.0% |
| !! | TTGAAAAAAATGAATTTATA+TGG | - | chr8.3:42741361-42741380 | MS.gene055875:intron | 10.0% |
| !! | TCAATATTTATTAAATCTAG+AGG | + | chr8.3:42739879-42739898 | None:intergenic | 15.0% |
| !!! | AATATAAAAGATTTTACAGT+TGG | - | chr8.3:42740978-42740997 | MS.gene055875:intron | 15.0% |
| !!! | ACTGTAAAATCTTTTATATT+TGG | + | chr8.3:42740978-42740997 | None:intergenic | 15.0% |
| !!! | ACTTTGTTTTCTTTATATTT+TGG | - | chr8.3:42739582-42739601 | MS.gene055875:intron | 15.0% |
| !!! | ATTTTAGAAGAAAAAGAAAA+TGG | - | chr8.3:42740468-42740487 | MS.gene055875:intron | 15.0% |
| !!! | CTTATTTCTATTTTATATTG+AGG | - | chr8.3:42740420-42740439 | MS.gene055875:intron | 15.0% |
| !!! | TCAATTGTTTTAATAATGTT+GGG | - | chr8.3:42741280-42741299 | MS.gene055875:intron | 15.0% |
| !!! | TTCAATTGTTTTAATAATGT+TGG | - | chr8.3:42741279-42741298 | MS.gene055875:intron | 15.0% |
| !!! | TTTTATATGTGAATAAAACA+TGG | - | chr8.3:42741489-42741508 | MS.gene055875:CDS | 15.0% |
| !! | AAATGAATTTATATGGTCTT+TGG | - | chr8.3:42741368-42741387 | MS.gene055875:intron | 20.0% |
| !! | AACTATAGAGATTAATGAAT+TGG | - | chr8.3:42738861-42738880 | MS.gene055875:CDS | 20.0% |
| !! | AATGAATTTATATGGTCTTT+GGG | - | chr8.3:42741369-42741388 | MS.gene055875:intron | 20.0% |
| !! | ATACAAAATTTATGGAAAAC+GGG | - | chr8.3:42740751-42740770 | MS.gene055875:CDS | 20.0% |
| !! | GATACAAAATTTATGGAAAA+CGG | - | chr8.3:42740750-42740769 | MS.gene055875:CDS | 20.0% |
| !! | TTTGTCTTTATGAAGTTTAT+GGG | - | chr8.3:42740224-42740243 | MS.gene055875:intron | 20.0% |
| !!! | AATAAACAAACTAGCTTATA+TGG | + | chr8.3:42740451-42740470 | None:intergenic | 20.0% |
| !!! | ATTGTAAAGAGAAATTTTTC+AGG | - | chr8.3:42741620-42741639 | MS.gene055875:CDS | 20.0% |
| !!! | ATTTTGTCATCGATTTATAA+TGG | - | chr8.3:42739494-42739513 | MS.gene055875:intron | 20.0% |
| ! | AACTGTCAAGAAAAAAAACA+AGG | + | chr8.3:42741114-42741133 | None:intergenic | 25.0% |
| ! | AATGCACAAAAAAAGGAAAT+TGG | - | chr8.3:42740890-42740909 | MS.gene055875:intron | 25.0% |
| ! | GCGAAAAAAACTAAAACTAT+CGG | + | chr8.3:42740627-42740646 | None:intergenic | 25.0% |
| ! | GCTTGATATTGTATTCTATT+TGG | - | chr8.3:42740316-42740335 | MS.gene055875:intron | 25.0% |
| ! | GTAAAATCAGCGATTTATTT+GGG | - | chr8.3:42738663-42738682 | MS.gene055875:intron | 25.0% |
| ! | GTTTGTCTTTATGAAGTTTA+TGG | - | chr8.3:42740223-42740242 | MS.gene055875:intron | 25.0% |
| ! | TAAAATGTGTGTCTAAAGAT+GGG | + | chr8.3:42739467-42739486 | None:intergenic | 25.0% |
| ! | TACAAAATTTATGGAAAACG+GGG | - | chr8.3:42740752-42740771 | MS.gene055875:CDS | 25.0% |
| ! | TATTAGAATGAGTGTATAGA+AGG | + | chr8.3:42741151-42741170 | None:intergenic | 25.0% |
| ! | TGTAAAATCAGCGATTTATT+TGG | - | chr8.3:42738662-42738681 | MS.gene055875:intron | 25.0% |
| ! | TTAAAATGTGTGTCTAAAGA+TGG | + | chr8.3:42739468-42739487 | None:intergenic | 25.0% |
| ! | TTGTCTTTATGAAGTTTATG+GGG | - | chr8.3:42740225-42740244 | MS.gene055875:intron | 25.0% |
| ! | TTGTTTCATCTTCTATTGAT+GGG | - | chr8.3:42738566-42738585 | MS.gene055875:intron | 25.0% |
| !! | AACTTATATTCTCCCATTTT+AGG | - | chr8.3:42739346-42739365 | MS.gene055875:intron | 25.0% |
| !! | AACTTTTCATTATCACTTGT+TGG | - | chr8.3:42739251-42739270 | MS.gene055875:intron | 25.0% |
| !! | ACTTTTCATTATCACTTGTT+GGG | - | chr8.3:42739252-42739271 | MS.gene055875:intron | 25.0% |
| !! | ATTTATTTGGGATAAAGTGT+TGG | - | chr8.3:42738675-42738694 | MS.gene055875:intron | 25.0% |
| !! | GTAAATCAGAATCATTTTAC+TGG | - | chr8.3:42740819-42740838 | MS.gene055875:CDS | 25.0% |
| !! | GTGAGTGTTTTCAATTTTTA+GGG | - | chr8.3:42741722-42741741 | MS.gene055875:CDS | 25.0% |
| !! | GTTTGTTTACATACTTTTCA+TGG | - | chr8.3:42739424-42739443 | MS.gene055875:intron | 25.0% |
| !! | TAACTTATAGCTCTTTTGTT+TGG | - | chr8.3:42739518-42739537 | MS.gene055875:intron | 25.0% |
| !! | TGTGAGTGTTTTCAATTTTT+AGG | - | chr8.3:42741721-42741740 | MS.gene055875:CDS | 25.0% |
| !! | TGTTTGGGATACAAAATTTA+TGG | - | chr8.3:42740743-42740762 | MS.gene055875:CDS | 25.0% |
| !! | TTTATTTGGGATAAAGTGTT+GGG | - | chr8.3:42738676-42738695 | MS.gene055875:intron | 25.0% |
| !!! | TACAGGTATTGATACATTTT+CGG | - | chr8.3:42739224-42739243 | MS.gene055875:CDS | 25.0% |
| AAATGTTAATCCTGAAGCTA+CGG | + | chr8.3:42740369-42740388 | None:intergenic | 30.0% | |
| AACAGAATTACAGAGGTTAA+AGG | + | chr8.3:42740927-42740946 | None:intergenic | 30.0% | |
| AAGATCGTTTGGCAAAAATA+TGG | - | chr8.3:42740072-42740091 | MS.gene055875:intron | 30.0% | |
| AAGATTAACAAAGTTGCTGT+TGG | - | chr8.3:42741030-42741049 | MS.gene055875:intron | 30.0% | |
| AATTACTGCACAAGAAATTC+AGG | + | chr8.3:42739101-42739120 | None:intergenic | 30.0% | |
| ACAAGTCAATGCACAAAAAA+AGG | - | chr8.3:42740883-42740902 | MS.gene055875:intron | 30.0% | |
| ATAGCAATAATGTTTCCTTG+TGG | - | chr8.3:42739638-42739657 | MS.gene055875:intron | 30.0% | |
| ATGATACACTTCTGAATGTT+AGG | - | chr8.3:42739021-42739040 | MS.gene055875:intron | 30.0% | |
| ATTAATTCTTAAGCTCCCTA+AGG | + | chr8.3:42740199-42740218 | None:intergenic | 30.0% | |
| CTTGTTTCATCTTCTATTGA+TGG | - | chr8.3:42738565-42738584 | MS.gene055875:intron | 30.0% | |
| GAAATAAGTTGCAATAACAG+CGG | + | chr8.3:42740408-42740427 | None:intergenic | 30.0% | |
| GTTGTGTAGATTCTTTAGTA+AGG | - | chr8.3:42738782-42738801 | MS.gene055875:intron | 30.0% | |
| TACACTTATTATTCTCGTGT+TGG | + | chr8.3:42738712-42738731 | None:intergenic | 30.0% | |
| TAGCTTCAGGATTAACATTT+CGG | - | chr8.3:42740369-42740388 | MS.gene055875:intron | 30.0% | |
| TATCGGCCATGTATATAAAA+CGG | + | chr8.3:42740610-42740629 | None:intergenic | 30.0% | |
| TATGTGAATAAAACATGGTG+CGG | - | chr8.3:42741494-42741513 | MS.gene055875:CDS | 30.0% | |
| TCTAAGAGAGAGTGATTATT+TGG | - | chr8.3:42741466-42741485 | MS.gene055875:CDS | 30.0% | |
| TGTCTTTATGAAGTTTATGG+GGG | - | chr8.3:42740226-42740245 | MS.gene055875:intron | 30.0% | |
| ! | AAGCAGATTCTTACAACTTT+TGG | + | chr8.3:42740300-42740319 | None:intergenic | 30.0% |
| ! | AATGCAGAGAGAAATTTGTT+AGG | - | chr8.3:42741590-42741609 | MS.gene055875:CDS | 30.0% |
| ! | AGCTTTATAACTGCTTGAAT+TGG | + | chr8.3:42739186-42739205 | None:intergenic | 30.0% |
| ! | TATATTCTTTTATGCTGCCA+GGG | - | chr8.3:42739682-42739701 | MS.gene055875:intron | 30.0% |
| ! | TCTTGTTTAAAGATCTGGAA+GGG | - | chr8.3:42739397-42739416 | MS.gene055875:intron | 30.0% |
| ! | TTATATTCTTTTATGCTGCC+AGG | - | chr8.3:42739681-42739700 | MS.gene055875:intron | 30.0% |
| !! | TTTGTACCTGATTTGTTGAA+TGG | + | chr8.3:42741238-42741257 | None:intergenic | 30.0% |
| !!! | GTTCTTTTTTAGTGTCCTTA+GGG | - | chr8.3:42740181-42740200 | MS.gene055875:intron | 30.0% |
| !!! | TGTTCTTTTTTAGTGTCCTT+AGG | - | chr8.3:42740180-42740199 | MS.gene055875:intron | 30.0% |
| AAGTTGCCATTCAACAAATC+AGG | - | chr8.3:42741229-42741248 | MS.gene055875:intron | 35.0% | |
| AATGGGACTTGAACCTAAAA+TGG | + | chr8.3:42739362-42739381 | None:intergenic | 35.0% | |
| ACTACAGTTCTCTCAGATTA+TGG | - | chr8.3:42739952-42739971 | MS.gene055875:CDS | 35.0% | |
| AGTATCTGTACATTCGTCAA+AGG | + | chr8.3:42739777-42739796 | None:intergenic | 35.0% | |
| AGTCAAATTACCAGAGACAT+AGG | - | chr8.3:42738826-42738845 | MS.gene055875:intron | 35.0% | |
| ATGGGACTTGAACCTAAAAT+GGG | + | chr8.3:42739361-42739380 | None:intergenic | 35.0% | |
| ATTTGAAGAGGTGGAGTAAT+TGG | - | chr8.3:42739118-42739137 | MS.gene055875:CDS | 35.0% | |
| CACTCAGAATTATGTCTCTT+AGG | - | chr8.3:42739278-42739297 | MS.gene055875:intron | 35.0% | |
| CAGTCCAATACCATTTCAAA+TGG | + | chr8.3:42739313-42739332 | None:intergenic | 35.0% | |
| CATGAGATAATGAACATGTC+TGG | - | chr8.3:42739987-42740006 | MS.gene055875:intron | 35.0% | |
| CCTTTATGTCCTAAAATCGA+AGG | + | chr8.3:42739614-42739633 | None:intergenic | 35.0% | |
| CGTTTGGCAAAAATATGGAA+AGG | - | chr8.3:42740077-42740096 | MS.gene055875:intron | 35.0% | |
| CTACAGTTCTCTCAGATTAT+GGG | - | chr8.3:42739953-42739972 | MS.gene055875:CDS | 35.0% | |
| CTCAATACTGTTGAGTTTCA+TGG | - | chr8.3:42740153-42740172 | MS.gene055875:intron | 35.0% | |
| CTCAGATTATGGGCATTAAA+TGG | - | chr8.3:42739963-42739982 | MS.gene055875:CDS | 35.0% | |
| CTCCAAAAACTTTGTTCAAG+CGG | + | chr8.3:42738366-42738385 | None:intergenic | 35.0% | |
| GAAGACACTAGATCATGAAT+CGG | - | chr8.3:42738510-42738529 | MS.gene055875:intron | 35.0% | |
| GAAGTTCACACCATTTGAAA+TGG | - | chr8.3:42739300-42739319 | MS.gene055875:intron | 35.0% | |
| GAATAATGCTGTGGTTGTTT+GGG | - | chr8.3:42738465-42738484 | MS.gene055875:intron | 35.0% | |
| GAATGTACAGATACTGTTTG+TGG | - | chr8.3:42739782-42739801 | MS.gene055875:intron | 35.0% | |
| GGGAGCTTAAGAATTAATCT+TGG | - | chr8.3:42740201-42740220 | MS.gene055875:intron | 35.0% | |
| GTCTTTATGAAGTTTATGGG+GGG | - | chr8.3:42740227-42740246 | MS.gene055875:intron | 35.0% | |
| TAATAAGTGTAGCTGAGTTG+AGG | - | chr8.3:42738721-42738740 | MS.gene055875:CDS | 35.0% | |
| TATTCAGTGATTGATACGAG+TGG | - | chr8.3:42741186-42741205 | MS.gene055875:intron | 35.0% | |
| TCTTGTGCAGTAATTTGAAG+AGG | - | chr8.3:42739106-42739125 | MS.gene055875:CDS | 35.0% | |
| TGAATAATGCTGTGGTTGTT+TGG | - | chr8.3:42738464-42738483 | MS.gene055875:intron | 35.0% | |
| TGGCTAAAAAGTTAAAACCC+TGG | + | chr8.3:42740576-42740595 | None:intergenic | 35.0% | |
| TGTATAAATCAAGTTCTCGC+TGG | + | chr8.3:42740845-42740864 | None:intergenic | 35.0% | |
| TGTCATTCCATTCCTTATTC+CGG | - | chr8.3:42740274-42740293 | MS.gene055875:intron | 35.0% | |
| TTAAAGTCTTCCTATGTCTC+TGG | + | chr8.3:42738839-42738858 | None:intergenic | 35.0% | |
| TTACTGGTATTGTGGTTGAT+GGG | - | chr8.3:42738536-42738555 | MS.gene055875:intron | 35.0% | |
| TTGAAAACACTCACAAGAGA+AGG | + | chr8.3:42741716-42741735 | None:intergenic | 35.0% | |
| TTGACAAATCGATTAGGCAT+TGG | - | chr8.3:42738320-42738339 | MS.gene055875:intron | 35.0% | |
| TTGGAATTGTTCGAATTGCA+CGG | - | chr8.3:42739137-42739156 | MS.gene055875:CDS | 35.0% | |
| TTTGTATCCCAAACAAAACC+AGG | + | chr8.3:42740738-42740757 | None:intergenic | 35.0% | |
| ! | AATGTTGGGATTGACTTTCT+TGG | - | chr8.3:42741294-42741313 | MS.gene055875:intron | 35.0% |
| ! | AGATTCTTACAACTTTTGGC+CGG | + | chr8.3:42740296-42740315 | None:intergenic | 35.0% |
| ! | AGGCATCCGTTTTATATACA+TGG | - | chr8.3:42740601-42740620 | MS.gene055875:intron | 35.0% |
| ! | ATGTTGGGATTGACTTTCTT+GGG | - | chr8.3:42741295-42741314 | MS.gene055875:intron | 35.0% |
| ! | CACACCATTTGAAATGGTAT+TGG | - | chr8.3:42739306-42739325 | MS.gene055875:intron | 35.0% |
| ! | CTCTTGTTTAAAGATCTGGA+AGG | - | chr8.3:42739396-42739415 | MS.gene055875:intron | 35.0% |
| ! | TAACAAAGTTGCTGTTGGAT+CGG | - | chr8.3:42741035-42741054 | MS.gene055875:intron | 35.0% |
| ! | TCATCTTCTATTGATGGGTA+GGG | - | chr8.3:42738571-42738590 | MS.gene055875:intron | 35.0% |
| ! | TTAGGTTCAAGTCCCATTTT+AGG | - | chr8.3:42739364-42739383 | MS.gene055875:intron | 35.0% |
| ! | TTCATCTTCTATTGATGGGT+AGG | - | chr8.3:42738570-42738589 | MS.gene055875:intron | 35.0% |
| ! | TTCCGCTTGAACAAAGTTTT+TGG | - | chr8.3:42738361-42738380 | MS.gene055875:intron | 35.0% |
| !! | CTAAAGTACTGTGACTTAAG+AGG | + | chr8.3:42741570-42741589 | None:intergenic | 35.0% |
| !! | TTAACTTTTTAGCCACACGA+AGG | - | chr8.3:42740581-42740600 | MS.gene055875:intron | 35.0% |
| !!! | AAGTCCCATTTTAGGTTCAA+GGG | - | chr8.3:42739372-42739391 | MS.gene055875:intron | 35.0% |
| !!! | CCTTCGATTTTAGGACATAA+AGG | - | chr8.3:42739611-42739630 | MS.gene055875:intron | 35.0% |
| AATTGAAGTTGCAACCTCGT+GGG | + | chr8.3:42741266-42741285 | None:intergenic | 40.0% | |
| AGAGTCCCTTGAACCTAAAA+TGG | + | chr8.3:42739380-42739399 | None:intergenic | 40.0% | |
| ATATTTCCTGATGCAGAGCA+AGG | + | chr8.3:42739905-42739924 | None:intergenic | 40.0% | |
| ATATTTGGCACTGCAGAACT+TGG | + | chr8.3:42740963-42740982 | None:intergenic | 40.0% | |
| CAACGCTTGACAAATCGATT+AGG | - | chr8.3:42738314-42738333 | MS.gene055875:intron | 40.0% | |
| CAGAACTTGGGATTGACTAA+CGG | + | chr8.3:42740950-42740969 | None:intergenic | 40.0% | |
| CGTCACTCAGAGAAATATGA+GGG | + | chr8.3:42739551-42739570 | None:intergenic | 40.0% | |
| CTAACGGAACAGAATTACAG+AGG | + | chr8.3:42740934-42740953 | None:intergenic | 40.0% | |
| CTGAACAAACAGTTGCAGTA+TGG | + | chr8.3:42740013-42740032 | None:intergenic | 40.0% | |
| CTGCTAAAATCATGTCCACA+AGG | + | chr8.3:42739656-42739675 | None:intergenic | 40.0% | |
| GAGTCCCTTGAACCTAAAAT+GGG | + | chr8.3:42739379-42739398 | None:intergenic | 40.0% | |
| GATGGTGTTCAGCATGATTA+TGG | - | chr8.3:42741081-42741100 | MS.gene055875:intron | 40.0% | |
| GTAACAGAAACAAGTCAAGC+AGG | + | chr8.3:42739934-42739953 | None:intergenic | 40.0% | |
| GTCAATTCGATCGGTGATAA+TGG | + | chr8.3:42740538-42740557 | None:intergenic | 40.0% | |
| GTTACTGGTATTGTGGTTGA+TGG | - | chr8.3:42738535-42738554 | MS.gene055875:intron | 40.0% | |
| GTTGCAATAACAGCGGATAT+TGG | + | chr8.3:42740401-42740420 | None:intergenic | 40.0% | |
| TACAGATACTGTTTGTGGCT+TGG | - | chr8.3:42739787-42739806 | MS.gene055875:intron | 40.0% | |
| TACTGTGACTTAAGAGGTCA+AGG | + | chr8.3:42741564-42741583 | None:intergenic | 40.0% | |
| TATTTGGCACTGCAGAACTT+GGG | + | chr8.3:42740962-42740981 | None:intergenic | 40.0% | |
| TCATATTTCTCTGAGTGACG+AGG | - | chr8.3:42739551-42739570 | MS.gene055875:intron | 40.0% | |
| TCGTCACTCAGAGAAATATG+AGG | + | chr8.3:42739552-42739571 | None:intergenic | 40.0% | |
| TGGTTGTGTGAATAATGCTG+TGG | - | chr8.3:42738456-42738475 | MS.gene055875:intron | 40.0% | |
| TGTGCAGTAATTTGAAGAGG+TGG | - | chr8.3:42739109-42739128 | MS.gene055875:CDS | 40.0% | |
| TTCGGTGGAATCCATGATAT+AGG | + | chr8.3:42738409-42738428 | None:intergenic | 40.0% | |
| ! | AAGCTACGGATTGTGAAAGT+TGG | + | chr8.3:42740355-42740374 | None:intergenic | 40.0% |
| ! | AAGCTTTATCCCACGAATCA+GGG | + | chr8.3:42738940-42738959 | None:intergenic | 40.0% |
| ! | AGTGGATTTGGTAGGCAATA+CGG | - | chr8.3:42741204-42741223 | MS.gene055875:intron | 40.0% |
| ! | CATACTTTTCATGGACATGC+AGG | - | chr8.3:42739433-42739452 | MS.gene055875:intron | 40.0% |
| ! | GGGACTCTTGTTTAAAGATC+TGG | - | chr8.3:42739392-42739411 | MS.gene055875:intron | 40.0% |
| ! | GTGATTGATACGAGTGGATT+TGG | - | chr8.3:42741192-42741211 | MS.gene055875:intron | 40.0% |
| ! | TACAACTTTTGGCCGGAATA+AGG | + | chr8.3:42740289-42740308 | None:intergenic | 40.0% |
| ! | TACTGGTATTGTGGTTGATG+GGG | - | chr8.3:42738537-42738556 | MS.gene055875:intron | 40.0% |
| ! | TCAGTTGATTCACATGCATC+AGG | - | chr8.3:42740029-42740048 | MS.gene055875:intron | 40.0% |
| ! | TTGATACGAGTGGATTTGGT+AGG | - | chr8.3:42741196-42741215 | MS.gene055875:intron | 40.0% |
| !! | AATCGATTTGTCAAGCGTTG+AGG | + | chr8.3:42738314-42738333 | None:intergenic | 40.0% |
| !! | ATTTGGGATAAAGTGTTGGG+TGG | - | chr8.3:42738679-42738698 | MS.gene055875:intron | 40.0% |
| !! | CGCTTGAACAAAGTTTTTGG+AGG | - | chr8.3:42738364-42738383 | MS.gene055875:intron | 40.0% |
| !!! | AGAGCATCCTGGTTTTGTTT+GGG | - | chr8.3:42740728-42740747 | MS.gene055875:intron | 40.0% |
| !!! | AGTTTTTTTCGCCACATCAC+AGG | - | chr8.3:42740635-42740654 | MS.gene055875:intron | 40.0% |
| !!! | ATGGGGGGATTTTTTGTTGT+GGG | - | chr8.3:42740242-42740261 | MS.gene055875:intron | 40.0% |
| !!! | CAAGTCCCATTTTAGGTTCA+AGG | - | chr8.3:42739371-42739390 | MS.gene055875:intron | 40.0% |
| !!! | TAGAGCATCCTGGTTTTGTT+TGG | - | chr8.3:42740727-42740746 | MS.gene055875:intron | 40.0% |
| !!! | TATGGGGGGATTTTTTGTTG+TGG | - | chr8.3:42740241-42740260 | MS.gene055875:intron | 40.0% |
| AAGGAGAGCAGATCAGATGA+AGG | - | chr8.3:42738801-42738820 | MS.gene055875:intron | 45.0% | |
| AGAAATGAACCCACCCATCA+TGG | + | chr8.3:42739847-42739866 | None:intergenic | 45.0% | |
| AGCAACAAGTTCCTGTGATG+TGG | + | chr8.3:42740649-42740668 | None:intergenic | 45.0% | |
| ATAAAACGGATGCCTTCGTG+TGG | + | chr8.3:42740596-42740615 | None:intergenic | 45.0% | |
| ATCATGCTGAACACCATCGA+AGG | + | chr8.3:42741079-42741098 | None:intergenic | 45.0% | |
| ATCCTATCTGCATCCCATGA+TGG | - | chr8.3:42739830-42739849 | MS.gene055875:intron | 45.0% | |
| ATCGGAGGTTACTGGTATTG+TGG | - | chr8.3:42738528-42738547 | MS.gene055875:intron | 45.0% | |
| ATTACCATCTGCGGCAACAA+CGG | - | chr8.3:42738277-42738296 | MS.gene055875:intron | 45.0% | |
| ATTGAAGTTGCAACCTCGTG+GGG | + | chr8.3:42741265-42741284 | None:intergenic | 45.0% | |
| ATTGTGACAGCATGTTCCGA+TGG | - | chr8.3:42740777-42740796 | MS.gene055875:CDS | 45.0% | |
| CAATTGAAGTTGCAACCTCG+TGG | + | chr8.3:42741267-42741286 | None:intergenic | 45.0% | |
| CAGCAAAAATATGCAGTCCC+TGG | + | chr8.3:42739702-42739721 | None:intergenic | 45.0% | |
| CAGTGGTAGCAAAGATCGTT+TGG | - | chr8.3:42740061-42740080 | MS.gene055875:intron | 45.0% | |
| CCAAATGCGTACAACTCCAT+CGG | + | chr8.3:42740796-42740815 | None:intergenic | 45.0% | |
| CTTTCACAATCCGTAGCTTC+AGG | - | chr8.3:42740356-42740375 | MS.gene055875:intron | 45.0% | |
| GAAATGAACCCACCCATCAT+GGG | + | chr8.3:42739846-42739865 | None:intergenic | 45.0% | |
| GACACTAGATCATGAATCGG+AGG | - | chr8.3:42738513-42738532 | MS.gene055875:intron | 45.0% | |
| GACAGTAACATCAATTGCCG+TGG | + | chr8.3:42741321-42741340 | None:intergenic | 45.0% | |
| GATCATGAATCGGAGGTTAC+TGG | - | chr8.3:42738520-42738539 | MS.gene055875:intron | 45.0% | |
| GCAGTTATAAAGCTACCCAC+AGG | - | chr8.3:42739192-42739211 | MS.gene055875:CDS | 45.0% | |
| GCATCAGGACTTATTGTCAG+TGG | - | chr8.3:42740044-42740063 | MS.gene055875:intron | 45.0% | |
| GCTTCGTCAGACCTATATCA+TGG | - | chr8.3:42738395-42738414 | MS.gene055875:intron | 45.0% | |
| GGATTGTGAAAGTTGGAGCT+GGG | + | chr8.3:42740348-42740367 | None:intergenic | 45.0% | |
| GGTCGGCTACATGGATAAAA+CGG | + | chr8.3:42738919-42738938 | None:intergenic | 45.0% | |
| GTTGTGCTGGATCTTGGTTT+GGG | - | chr8.3:42738746-42738765 | MS.gene055875:CDS | 45.0% | |
| TCCTATCTGCATCCCATGAT+GGG | - | chr8.3:42739831-42739850 | MS.gene055875:intron | 45.0% | |
| TGTTGTGCTGGATCTTGGTT+TGG | - | chr8.3:42738745-42738764 | MS.gene055875:CDS | 45.0% | |
| TTCGAATTGCACGGAGACAT+GGG | - | chr8.3:42739146-42739165 | MS.gene055875:CDS | 45.0% | |
| TTGAAAAGCGGTGGTGTTTC+TGG | - | chr8.3:42738436-42738455 | MS.gene055875:intron | 45.0% | |
| TTTATCCCACGAATCAGGGT+CGG | + | chr8.3:42738936-42738955 | None:intergenic | 45.0% | |
| TTTCTCTGAGTGACGAGGAA+TGG | - | chr8.3:42739556-42739575 | MS.gene055875:intron | 45.0% | |
| ! | AACCCTACTTTGAAAAGCGG+TGG | - | chr8.3:42738427-42738446 | MS.gene055875:intron | 45.0% |
| ! | AGGTACAAATTTTCCCCACG+AGG | - | chr8.3:42741249-42741268 | MS.gene055875:intron | 45.0% |
| ! | CAAGCTTTATCCCACGAATC+AGG | + | chr8.3:42738941-42738960 | None:intergenic | 45.0% |
| ! | CCGAACCCTACTTTGAAAAG+CGG | - | chr8.3:42738424-42738443 | MS.gene055875:intron | 45.0% |
| ! | CTGATTCGTGGGATAAAGCT+TGG | - | chr8.3:42738939-42738958 | MS.gene055875:intron | 45.0% |
| ! | CTTTTCAAAGTAGGGTTCGG+TGG | + | chr8.3:42738424-42738443 | None:intergenic | 45.0% |
| ! | CTTTTGGCCGGAATAAGGAA+TGG | + | chr8.3:42740284-42740303 | None:intergenic | 45.0% |
| ! | GTGGATTTGGTAGGCAATAC+GGG | - | chr8.3:42741205-42741224 | MS.gene055875:intron | 45.0% |
| ! | TGGTCTGTGCCTTCGATTTT+AGG | - | chr8.3:42739602-42739621 | MS.gene055875:intron | 45.0% |
| ! | TTGGCTGCGATGTCTGATTT+TGG | - | chr8.3:42739806-42739825 | MS.gene055875:intron | 45.0% |
| !! | ACACCACCGCTTTTCAAAGT+AGG | + | chr8.3:42738433-42738452 | None:intergenic | 45.0% |
| !! | CACCACCGCTTTTCAAAGTA+GGG | + | chr8.3:42738432-42738451 | None:intergenic | 45.0% |
| !! | CATCACAGGAACTTGTTGCT+TGG | - | chr8.3:42740649-42740668 | MS.gene055875:intron | 45.0% |
| !! | CCGCTTTTCAAAGTAGGGTT+CGG | + | chr8.3:42738427-42738446 | None:intergenic | 45.0% |
| !! | TCGGTGATAATGGAAGAGAC+TGG | + | chr8.3:42740528-42740547 | None:intergenic | 45.0% |
| !!! | ATTTTTTGTTGTGGGGGTGG+GGG | - | chr8.3:42740250-42740269 | MS.gene055875:intron | 45.0% |
| !!! | GATTTTTTGTTGTGGGGGTG+GGG | - | chr8.3:42740249-42740268 | MS.gene055875:intron | 45.0% |
| !!! | GGATTTTTTGTTGTGGGGGT+GGG | - | chr8.3:42740248-42740267 | MS.gene055875:intron | 45.0% |
| !!! | TGGGGGGATTTTTTGTTGTG+GGG | - | chr8.3:42740243-42740262 | MS.gene055875:intron | 45.0% |
| ACCCATCATGGGATGCAGAT+AGG | + | chr8.3:42739835-42739854 | None:intergenic | 50.0% | |
| ACCTGTAACAAGCTCTCCTG+TGG | + | chr8.3:42739211-42739230 | None:intergenic | 50.0% | |
| CACGATGATGCTGAAGTTCG+CGG | - | chr8.3:42738253-42738272 | MS.gene055875:intron | 50.0% | |
| CCGATGGAGTTGTACGCATT+TGG | - | chr8.3:42740793-42740812 | MS.gene055875:CDS | 50.0% | |
| CCTGTAACAAGCTCTCCTGT+GGG | + | chr8.3:42739210-42739229 | None:intergenic | 50.0% | |
| CGCATGCACGTCAATTCGAT+CGG | + | chr8.3:42740547-42740566 | None:intergenic | 50.0% | |
| CGGATTGTGAAAGTTGGAGC+TGG | + | chr8.3:42740349-42740368 | None:intergenic | 50.0% | |
| GAACTTCAGCATCATCGTGG+CGG | + | chr8.3:42738252-42738271 | None:intergenic | 50.0% | |
| GAGGATGTTGTGCTGGATCT+TGG | - | chr8.3:42738740-42738759 | MS.gene055875:CDS | 50.0% | |
| GCTGAACACCATCGAAGGAA+GGG | + | chr8.3:42741074-42741093 | None:intergenic | 50.0% | |
| GTTCGAATTGCACGGAGACA+TGG | - | chr8.3:42739145-42739164 | MS.gene055875:CDS | 50.0% | |
| GTTCGCGGAATTACCATCTG+CGG | - | chr8.3:42738268-42738287 | MS.gene055875:intron | 50.0% | |
| TCAAATCGCCCTTCCTTCGA+TGG | - | chr8.3:42741063-42741082 | MS.gene055875:intron | 50.0% | |
| TGAATGCCTTGCTCTGCATC+AGG | - | chr8.3:42739896-42739915 | MS.gene055875:CDS | 50.0% | |
| TGCTGAACACCATCGAAGGA+AGG | + | chr8.3:42741075-42741094 | None:intergenic | 50.0% | |
| ! | CTGAGTTGAGGATGTTGTGC+TGG | - | chr8.3:42738733-42738752 | MS.gene055875:CDS | 50.0% |
| ! | GGATTGACTTTCTTGGGCCA+CGG | - | chr8.3:42741301-42741320 | MS.gene055875:intron | 50.0% |
| ! | GTTCAGAGCATAGAGCATCC+TGG | - | chr8.3:42740717-42740736 | MS.gene055875:intron | 50.0% |
| ! | GTTGTTTGGGACGTGGATAG+TGG | - | chr8.3:42738478-42738497 | MS.gene055875:intron | 50.0% |
| ! | TATCTGCATCCCATGATGGG+TGG | - | chr8.3:42739834-42739853 | MS.gene055875:intron | 50.0% |
| ! | TGGTTTGGGCAAGTAGCAAG+AGG | - | chr8.3:42738760-42738779 | MS.gene055875:intron | 50.0% |
| !! | ATCTGCATCCCATGATGGGT+GGG | - | chr8.3:42739835-42739854 | MS.gene055875:intron | 50.0% |
| !!! | GGGATTTTTTGTTGTGGGGG+TGG | - | chr8.3:42740247-42740266 | MS.gene055875:intron | 50.0% |
| !!! | GGGGGGATTTTTTGTTGTGG+GGG | - | chr8.3:42740244-42740263 | MS.gene055875:intron | 50.0% |
| !!! | TTTTTTGTTGTGGGGGTGGG+GGG | - | chr8.3:42740251-42740270 | MS.gene055875:intron | 50.0% |
| ACGAATCAGGGTCGGCTACA+TGG | + | chr8.3:42738928-42738947 | None:intergenic | 55.0% | |
| CGCGAACTTCAGCATCATCG+TGG | + | chr8.3:42738255-42738274 | None:intergenic | 55.0% | |
| GAATTGCACGGAGACATGGG+CGG | - | chr8.3:42739149-42739168 | MS.gene055875:CDS | 55.0% | |
| TGAAAGTTGGAGCTGGGCTG+TGG | + | chr8.3:42740342-42740361 | None:intergenic | 55.0% | |
| ! | ACGTGCATGCGAAGCATCCA+GGG | - | chr8.3:42740556-42740575 | MS.gene055875:CDS | 55.0% |
| ! | ATGTAGCCGACCCTGATTCG+TGG | - | chr8.3:42738927-42738946 | MS.gene055875:intron | 55.0% |
| ! | TGCTGTGGTTGTTTGGGACG+TGG | - | chr8.3:42738471-42738490 | MS.gene055875:intron | 55.0% |
| ! | TGTAGCCGACCCTGATTCGT+GGG | - | chr8.3:42738928-42738947 | MS.gene055875:intron | 55.0% |
| !! | CCCACAGGAGAGCTTGTTAC+AGG | - | chr8.3:42739207-42739226 | MS.gene055875:CDS | 55.0% |
| ACCATCTGCGGCAACAACGG+CGG | - | chr8.3:42738280-42738299 | MS.gene055875:intron | 60.0% | |
| GGCGGAGTGCACAGCGTAAT+TGG | + | chr8.3:42738234-42738253 | None:intergenic | 60.0% | |
| ! | GACGTGCATGCGAAGCATCC+AGG | - | chr8.3:42740555-42740574 | MS.gene055875:CDS | 60.0% |
| GAGACATGGGCGGCTCACGA+GGG | - | chr8.3:42739159-42739178 | MS.gene055875:CDS | 65.0% | |
| TCCGCCGTTGTTGCCGCAGA+TGG | + | chr8.3:42738284-42738303 | None:intergenic | 65.0% | |
| GGAGACATGGGCGGCTCACG+AGG | - | chr8.3:42739158-42739177 | MS.gene055875:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 42738211 | 42741749 | 42738211 | ID=MS.gene055875 |
| chr8.3 | mRNA | 42738211 | 42741749 | 42738211 | ID=MS.gene055875.t1;Parent=MS.gene055875 |
| chr8.3 | exon | 42741373 | 42741749 | 42741373 | ID=MS.gene055875.t1.exon1;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42741373 | 42741749 | 42741373 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42740732 | 42740844 | 42740732 | ID=MS.gene055875.t1.exon2;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42740732 | 42740844 | 42740732 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42740506 | 42740592 | 42740506 | ID=MS.gene055875.t1.exon3;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42740506 | 42740592 | 42740506 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42740108 | 42740168 | 42740108 | ID=MS.gene055875.t1.exon4;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42740108 | 42740168 | 42740108 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42739862 | 42740001 | 42739862 | ID=MS.gene055875.t1.exon5;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42739862 | 42740001 | 42739862 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42739043 | 42739254 | 42739043 | ID=MS.gene055875.t1.exon6;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42739043 | 42739254 | 42739043 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42738858 | 42738927 | 42738858 | ID=MS.gene055875.t1.exon7;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42738858 | 42738927 | 42738858 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42738710 | 42738767 | 42738710 | ID=MS.gene055875.t1.exon8;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42738710 | 42738767 | 42738710 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| chr8.3 | exon | 42738211 | 42738217 | 42738211 | ID=MS.gene055875.t1.exon9;Parent=MS.gene055875.t1 |
| chr8.3 | CDS | 42738211 | 42738217 | 42738211 | ID=cds.MS.gene055875.t1;Parent=MS.gene055875.t1 |
| Gene Sequence |
| Protein sequence |
