Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071960.t1 | XP_024633248.1 | 93.9 | 244 | 1 | 1 | 1 | 230 | 1 | 244 | 1.70E-76 | 295.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071960.t1 | Q9LIN3 | 74.8 | 151 | 34 | 2 | 1 | 149 | 1 | 149 | 7.1e-47 | 188.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071960.t1 | A0A396J0R1 | 93.9 | 244 | 1 | 1 | 1 | 230 | 1 | 244 | 1.2e-76 | 295.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049255 | MS.gene071960 | 0.838106 | 3.50E-57 | -1.69E-46 |
MS.gene049580 | MS.gene071960 | 0.818475 | 1.92E-52 | -1.69E-46 |
MS.gene049825 | MS.gene071960 | 0.8254 | 4.78E-54 | -1.69E-46 |
MS.gene049873 | MS.gene071960 | 0.825406 | 4.77E-54 | -1.69E-46 |
MS.gene049884 | MS.gene071960 | 0.818901 | 1.54E-52 | -1.69E-46 |
MS.gene050277 | MS.gene071960 | 0.842834 | 2.03E-58 | -1.69E-46 |
MS.gene050303 | MS.gene071960 | 0.833244 | 5.96E-56 | -1.69E-46 |
MS.gene050955 | MS.gene071960 | 0.826799 | 2.22E-54 | -1.69E-46 |
MS.gene051241 | MS.gene071960 | 0.835282 | 1.84E-56 | -1.69E-46 |
MS.gene051328 | MS.gene071960 | 0.84549 | 3.93E-59 | -1.69E-46 |
MS.gene05134 | MS.gene071960 | 0.834854 | 2.36E-56 | -1.69E-46 |
MS.gene051903 | MS.gene071960 | 0.81585 | 7.49E-52 | -1.69E-46 |
MS.gene052519 | MS.gene071960 | 0.807422 | 5.09E-50 | -1.69E-46 |
MS.gene052947 | MS.gene071960 | 0.844009 | 9.86E-59 | -1.69E-46 |
MS.gene053006 | MS.gene071960 | 0.810206 | 1.29E-50 | -1.69E-46 |
MS.gene053226 | MS.gene071960 | 0.802986 | 4.32E-49 | -1.69E-46 |
MS.gene054403 | MS.gene071960 | 0.8047 | 1.90E-49 | -1.69E-46 |
MS.gene05548 | MS.gene071960 | 0.823059 | 1.70E-53 | -1.69E-46 |
MS.gene055555 | MS.gene071960 | 0.861055 | 1.34E-63 | -1.69E-46 |
MS.gene055808 | MS.gene071960 | 0.849208 | 3.75E-60 | -1.69E-46 |
MS.gene056091 | MS.gene071960 | 0.82414 | 9.48E-54 | -1.69E-46 |
MS.gene056631 | MS.gene071960 | 0.842141 | 3.10E-58 | -1.69E-46 |
MS.gene057060 | MS.gene071960 | 0.804212 | 2.41E-49 | -1.69E-46 |
MS.gene057079 | MS.gene071960 | 0.827708 | 1.35E-54 | -1.69E-46 |
MS.gene057555 | MS.gene071960 | 0.800018 | 1.75E-48 | -1.69E-46 |
MS.gene057705 | MS.gene071960 | 0.89167 | 3.21E-74 | -1.69E-46 |
MS.gene05781 | MS.gene071960 | 0.804877 | 1.75E-49 | -1.69E-46 |
MS.gene058216 | MS.gene071960 | 0.800115 | 1.68E-48 | -1.69E-46 |
MS.gene05953 | MS.gene071960 | 0.818443 | 1.95E-52 | -1.69E-46 |
MS.gene05954 | MS.gene071960 | 0.845531 | 3.83E-59 | -1.69E-46 |
MS.gene06001 | MS.gene071960 | 0.824311 | 8.65E-54 | -1.69E-46 |
MS.gene060429 | MS.gene071960 | 0.859087 | 5.27E-63 | -1.69E-46 |
MS.gene060917 | MS.gene071960 | 0.863501 | 2.38E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071960.t1 | MTR_4g070080 | 57.647 | 85 | 35 | 1 | 1 | 85 | 1 | 84 | 4.87e-30 | 108 |
MS.gene071960.t1 | MTR_4g070080 | 58.333 | 84 | 34 | 1 | 1 | 84 | 1 | 83 | 1.49e-29 | 108 |
MS.gene071960.t1 | MTR_4g070190 | 56.250 | 80 | 35 | 0 | 6 | 85 | 7 | 86 | 1.43e-27 | 103 |
MS.gene071960.t1 | MTR_4g070140 | 56.250 | 80 | 35 | 0 | 6 | 85 | 7 | 86 | 5.65e-27 | 102 |
MS.gene071960.t1 | MTR_7g105260 | 46.988 | 83 | 44 | 0 | 7 | 89 | 32 | 114 | 5.80e-22 | 88.2 |
MS.gene071960.t1 | MTR_3g025880 | 42.857 | 84 | 48 | 0 | 1 | 84 | 38 | 121 | 4.07e-20 | 88.6 |
MS.gene071960.t1 | MTR_4g109540 | 41.667 | 84 | 49 | 0 | 1 | 84 | 36 | 119 | 1.84e-18 | 82.0 |
MS.gene071960.t1 | MTR_7g013730 | 46.053 | 76 | 41 | 0 | 8 | 83 | 41 | 116 | 2.40e-18 | 81.3 |
MS.gene071960.t1 | MTR_3g075500 | 47.436 | 78 | 41 | 0 | 7 | 84 | 206 | 283 | 1.28e-17 | 80.1 |
MS.gene071960.t1 | MTR_3g075500 | 36.905 | 84 | 53 | 0 | 8 | 91 | 110 | 193 | 1.91e-11 | 62.8 |
MS.gene071960.t1 | MTR_7g099940 | 47.561 | 82 | 43 | 0 | 8 | 89 | 36 | 117 | 1.87e-17 | 76.3 |
MS.gene071960.t1 | MTR_3g084040 | 50.000 | 76 | 37 | 1 | 8 | 83 | 37 | 111 | 2.95e-17 | 75.9 |
MS.gene071960.t1 | MTR_1g092860 | 41.463 | 82 | 48 | 0 | 8 | 89 | 193 | 274 | 8.27e-17 | 77.8 |
MS.gene071960.t1 | MTR_7g013740 | 42.857 | 77 | 44 | 0 | 8 | 84 | 41 | 117 | 1.06e-16 | 74.7 |
MS.gene071960.t1 | MTR_3g080130 | 45.122 | 82 | 43 | 1 | 8 | 87 | 37 | 118 | 1.10e-16 | 74.3 |
MS.gene071960.t1 | MTR_7g117495 | 48.611 | 72 | 33 | 1 | 3 | 70 | 14 | 85 | 2.23e-16 | 75.9 |
MS.gene071960.t1 | MTR_7g117495 | 48.611 | 72 | 33 | 1 | 3 | 70 | 14 | 85 | 2.76e-16 | 75.9 |
MS.gene071960.t1 | MTR_1g045510 | 40.506 | 79 | 47 | 0 | 6 | 84 | 203 | 281 | 4.69e-16 | 75.5 |
MS.gene071960.t1 | MTR_8g024520 | 44.595 | 74 | 40 | 1 | 3 | 76 | 21 | 93 | 4.90e-16 | 75.5 |
MS.gene071960.t1 | MTR_8g024520 | 44.595 | 74 | 40 | 1 | 3 | 76 | 21 | 93 | 5.02e-16 | 75.5 |
MS.gene071960.t1 | MTR_3g055990 | 39.583 | 96 | 50 | 2 | 3 | 95 | 2 | 92 | 6.79e-16 | 76.3 |
MS.gene071960.t1 | MTR_3g055990 | 39.583 | 96 | 50 | 2 | 3 | 95 | 2 | 92 | 7.02e-16 | 76.3 |
MS.gene071960.t1 | MTR_4g109540 | 41.892 | 74 | 43 | 0 | 11 | 84 | 54 | 127 | 8.37e-16 | 74.7 |
MS.gene071960.t1 | MTR_3g029580 | 37.255 | 102 | 52 | 2 | 8 | 97 | 33 | 134 | 2.02e-15 | 70.9 |
MS.gene071960.t1 | MTR_1g064230 | 46.053 | 76 | 41 | 0 | 8 | 83 | 197 | 272 | 5.07e-15 | 72.8 |
MS.gene071960.t1 | MTR_1g064230 | 38.318 | 107 | 66 | 0 | 8 | 114 | 85 | 191 | 3.67e-12 | 64.7 |
MS.gene071960.t1 | MTR_6g477870 | 39.773 | 88 | 48 | 1 | 8 | 90 | 96 | 183 | 6.07e-15 | 70.9 |
MS.gene071960.t1 | MTR_2g026180 | 41.860 | 86 | 45 | 2 | 8 | 93 | 5 | 85 | 7.50e-15 | 73.2 |
MS.gene071960.t1 | MTR_4g035310 | 45.070 | 71 | 38 | 1 | 3 | 72 | 12 | 82 | 8.13e-15 | 72.0 |
MS.gene071960.t1 | MTR_4g035310 | 45.070 | 71 | 38 | 1 | 3 | 72 | 12 | 82 | 1.10e-14 | 71.6 |
MS.gene071960.t1 | MTR_3g084040 | 42.466 | 73 | 36 | 1 | 8 | 80 | 37 | 103 | 3.10e-14 | 67.0 |
MS.gene071960.t1 | MTR_3g116130 | 50.000 | 58 | 29 | 0 | 3 | 60 | 25 | 82 | 3.48e-14 | 70.5 |
MS.gene071960.t1 | MTR_5g097580 | 37.363 | 91 | 52 | 2 | 3 | 93 | 2 | 87 | 3.74e-14 | 71.2 |
MS.gene071960.t1 | MTR_5g097580 | 37.363 | 91 | 52 | 2 | 3 | 93 | 2 | 87 | 3.76e-14 | 71.2 |
MS.gene071960.t1 | MTR_4g104470 | 37.647 | 85 | 53 | 0 | 4 | 88 | 119 | 203 | 1.12e-13 | 69.3 |
MS.gene071960.t1 | MTR_4g104470 | 41.026 | 78 | 46 | 0 | 7 | 84 | 216 | 293 | 4.67e-13 | 67.4 |
MS.gene071960.t1 | MTR_1g073690 | 38.272 | 81 | 48 | 1 | 3 | 83 | 2 | 80 | 1.29e-13 | 69.7 |
MS.gene071960.t1 | MTR_1g073690 | 35.443 | 79 | 50 | 1 | 8 | 86 | 113 | 190 | 1.26e-12 | 66.6 |
MS.gene071960.t1 | MTR_3g075500 | 46.875 | 64 | 34 | 0 | 7 | 70 | 206 | 269 | 1.46e-13 | 68.6 |
MS.gene071960.t1 | MTR_3g075500 | 36.905 | 84 | 53 | 0 | 8 | 91 | 110 | 193 | 2.91e-11 | 62.0 |
MS.gene071960.t1 | MTR_5g064120 | 41.892 | 74 | 42 | 1 | 3 | 76 | 12 | 84 | 1.51e-13 | 68.6 |
MS.gene071960.t1 | MTR_3g116130 | 50.000 | 58 | 29 | 0 | 3 | 60 | 25 | 82 | 1.57e-13 | 69.3 |
MS.gene071960.t1 | MTR_3g082650 | 37.500 | 88 | 52 | 1 | 2 | 86 | 98 | 185 | 2.05e-13 | 68.9 |
MS.gene071960.t1 | MTR_7g106440 | 40.789 | 76 | 45 | 0 | 8 | 83 | 213 | 288 | 4.42e-13 | 67.8 |
MS.gene071960.t1 | MTR_3g462330 | 40.000 | 75 | 45 | 0 | 9 | 83 | 47 | 121 | 5.91e-13 | 67.4 |
MS.gene071960.t1 | MTR_7g107580 | 41.096 | 73 | 43 | 0 | 9 | 81 | 350 | 422 | 6.90e-13 | 67.4 |
MS.gene071960.t1 | MTR_7g107580 | 41.096 | 73 | 43 | 0 | 9 | 81 | 351 | 423 | 7.18e-13 | 67.4 |
MS.gene071960.t1 | MTR_4g081520 | 41.558 | 77 | 45 | 0 | 9 | 85 | 53 | 129 | 9.85e-13 | 63.9 |
MS.gene071960.t1 | MTR_2g096560 | 35.802 | 81 | 52 | 0 | 8 | 88 | 8 | 88 | 1.08e-12 | 62.4 |
MS.gene071960.t1 | MTR_6g004810 | 34.177 | 79 | 52 | 0 | 8 | 86 | 134 | 212 | 1.55e-12 | 66.2 |
MS.gene071960.t1 | MTR_3g092490 | 41.892 | 74 | 42 | 1 | 3 | 76 | 22 | 94 | 1.83e-12 | 63.9 |
MS.gene071960.t1 | MTR_3g092490 | 41.892 | 74 | 42 | 1 | 3 | 76 | 22 | 94 | 2.55e-12 | 64.7 |
MS.gene071960.t1 | MTR_3g092490 | 41.892 | 74 | 42 | 1 | 3 | 76 | 22 | 94 | 2.60e-12 | 64.7 |
MS.gene071960.t1 | MTR_1g056520 | 39.474 | 76 | 46 | 0 | 8 | 83 | 208 | 283 | 3.11e-12 | 65.1 |
MS.gene071960.t1 | MTR_8g074790 | 35.417 | 96 | 62 | 0 | 9 | 104 | 64 | 159 | 4.31e-12 | 64.3 |
MS.gene071960.t1 | MTR_4g063560 | 37.662 | 77 | 48 | 0 | 8 | 84 | 34 | 110 | 6.50e-12 | 60.8 |
MS.gene071960.t1 | MTR_3g029580 | 42.857 | 63 | 36 | 0 | 8 | 70 | 33 | 95 | 1.26e-11 | 60.8 |
MS.gene071960.t1 | MTR_4g117350 | 33.735 | 83 | 55 | 0 | 8 | 90 | 72 | 154 | 4.13e-11 | 60.1 |
MS.gene071960.t1 | MTR_5g023060 | 35.526 | 76 | 49 | 0 | 9 | 84 | 133 | 208 | 5.85e-11 | 61.2 |
MS.gene071960.t1 | MTR_3g065190 | 44.737 | 76 | 41 | 1 | 9 | 83 | 114 | 189 | 6.54e-11 | 61.6 |
MS.gene071960.t1 | MTR_5g070100 | 32.000 | 75 | 51 | 0 | 9 | 83 | 38 | 112 | 8.67e-11 | 61.2 |
MS.gene071960.t1 | MTR_3g014000 | 40.244 | 82 | 38 | 2 | 9 | 83 | 36 | 113 | 9.15e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071960.t1 | AT3G26420 | 54.231 | 260 | 70 | 9 | 1 | 228 | 1 | 243 | 4.80e-63 | 197 |
MS.gene071960.t1 | AT2G21660 | 62.025 | 79 | 30 | 0 | 6 | 84 | 7 | 85 | 1.03e-29 | 108 |
MS.gene071960.t1 | AT4G39260 | 56.818 | 88 | 37 | 1 | 1 | 88 | 1 | 87 | 1.34e-29 | 106 |
MS.gene071960.t1 | AT1G60650 | 39.568 | 139 | 66 | 2 | 6 | 140 | 11 | 135 | 3.15e-29 | 111 |
MS.gene071960.t1 | AT1G60650 | 39.568 | 139 | 66 | 2 | 6 | 140 | 11 | 135 | 3.15e-29 | 111 |
MS.gene071960.t1 | AT5G04280 | 40.571 | 175 | 93 | 4 | 1 | 164 | 1 | 175 | 9.92e-28 | 107 |
MS.gene071960.t1 | AT4G39260 | 57.143 | 84 | 35 | 1 | 1 | 84 | 1 | 83 | 1.87e-27 | 102 |
MS.gene071960.t1 | AT4G39260 | 55.072 | 69 | 30 | 1 | 1 | 69 | 1 | 68 | 4.48e-20 | 82.4 |
MS.gene071960.t1 | AT4G13850 | 51.190 | 84 | 39 | 1 | 8 | 89 | 36 | 119 | 6.36e-20 | 83.2 |
MS.gene071960.t1 | AT4G13850 | 53.247 | 77 | 36 | 0 | 8 | 84 | 36 | 112 | 6.76e-20 | 82.4 |
MS.gene071960.t1 | AT4G13850 | 51.190 | 84 | 39 | 1 | 8 | 89 | 36 | 119 | 8.96e-20 | 83.2 |
MS.gene071960.t1 | AT5G61030 | 50.000 | 76 | 38 | 0 | 8 | 83 | 41 | 116 | 2.40e-19 | 85.1 |
MS.gene071960.t1 | AT5G61030 | 50.000 | 76 | 38 | 0 | 8 | 83 | 41 | 116 | 2.40e-19 | 85.1 |
MS.gene071960.t1 | AT5G06210 | 46.914 | 81 | 43 | 0 | 8 | 88 | 35 | 115 | 8.02e-19 | 80.1 |
MS.gene071960.t1 | AT4G24770 | 48.718 | 78 | 40 | 0 | 7 | 84 | 244 | 321 | 4.08e-18 | 82.0 |
MS.gene071960.t1 | AT4G24770 | 39.773 | 88 | 53 | 0 | 4 | 91 | 147 | 234 | 7.72e-15 | 72.8 |
MS.gene071960.t1 | AT4G24770 | 48.718 | 78 | 40 | 0 | 7 | 84 | 244 | 321 | 4.08e-18 | 82.0 |
MS.gene071960.t1 | AT4G24770 | 39.773 | 88 | 53 | 0 | 4 | 91 | 147 | 234 | 7.72e-15 | 72.8 |
MS.gene071960.t1 | AT5G04280 | 44.762 | 105 | 52 | 2 | 39 | 137 | 1 | 105 | 9.78e-18 | 80.1 |
MS.gene071960.t1 | AT5G04280 | 44.762 | 105 | 52 | 2 | 39 | 137 | 1 | 105 | 9.78e-18 | 80.1 |
MS.gene071960.t1 | AT5G04280 | 44.762 | 105 | 52 | 2 | 39 | 137 | 1 | 105 | 9.78e-18 | 80.1 |
MS.gene071960.t1 | AT5G04280 | 44.762 | 105 | 52 | 2 | 39 | 137 | 1 | 105 | 9.78e-18 | 80.1 |
MS.gene071960.t1 | AT3G23830 | 45.679 | 81 | 44 | 0 | 8 | 88 | 36 | 116 | 1.01e-17 | 77.0 |
MS.gene071960.t1 | AT3G23830 | 45.679 | 81 | 44 | 0 | 8 | 88 | 36 | 116 | 1.01e-17 | 77.0 |
MS.gene071960.t1 | AT1G18630 | 51.316 | 76 | 37 | 0 | 8 | 83 | 37 | 112 | 1.62e-17 | 77.0 |
MS.gene071960.t1 | AT3G53460 | 46.753 | 77 | 41 | 0 | 8 | 84 | 258 | 334 | 2.07e-17 | 80.1 |
MS.gene071960.t1 | AT3G53460 | 46.753 | 77 | 41 | 0 | 8 | 84 | 258 | 334 | 2.07e-17 | 80.1 |
MS.gene071960.t1 | AT3G53460 | 46.753 | 77 | 41 | 0 | 8 | 84 | 258 | 334 | 2.07e-17 | 80.1 |
MS.gene071960.t1 | AT2G37220 | 46.753 | 77 | 41 | 0 | 8 | 84 | 205 | 281 | 2.30e-17 | 79.3 |
MS.gene071960.t1 | AT2G37220 | 36.667 | 90 | 57 | 0 | 2 | 91 | 86 | 175 | 1.86e-13 | 68.6 |
MS.gene071960.t1 | AT3G53460 | 46.753 | 77 | 41 | 0 | 8 | 84 | 279 | 355 | 3.34e-17 | 79.7 |
MS.gene071960.t1 | AT1G33470 | 53.125 | 64 | 30 | 0 | 1 | 64 | 1 | 64 | 5.11e-17 | 77.8 |
MS.gene071960.t1 | AT1G33470 | 53.125 | 64 | 30 | 0 | 1 | 64 | 1 | 64 | 7.13e-17 | 77.4 |
MS.gene071960.t1 | AT1G33470 | 53.125 | 64 | 30 | 0 | 1 | 64 | 1 | 64 | 7.16e-17 | 77.4 |
MS.gene071960.t1 | AT5G59865 | 40.777 | 103 | 51 | 1 | 2 | 94 | 11 | 113 | 8.48e-17 | 73.9 |
MS.gene071960.t1 | AT4G26650 | 42.553 | 94 | 52 | 1 | 2 | 95 | 10 | 101 | 1.48e-16 | 78.2 |
MS.gene071960.t1 | AT4G26650 | 42.553 | 94 | 52 | 1 | 2 | 95 | 7 | 98 | 1.59e-16 | 78.2 |
MS.gene071960.t1 | AT3G13224 | 37.500 | 104 | 62 | 1 | 8 | 108 | 110 | 213 | 2.53e-16 | 77.0 |
MS.gene071960.t1 | AT2G46780 | 46.667 | 75 | 39 | 1 | 2 | 76 | 17 | 90 | 4.16e-16 | 76.3 |
MS.gene071960.t1 | AT2G46780 | 46.667 | 75 | 39 | 1 | 2 | 76 | 17 | 90 | 4.16e-16 | 76.3 |
MS.gene071960.t1 | AT1G60650 | 38.318 | 107 | 48 | 2 | 38 | 140 | 6 | 98 | 5.18e-16 | 75.1 |
MS.gene071960.t1 | AT3G07810 | 39.130 | 92 | 51 | 2 | 3 | 94 | 2 | 88 | 5.35e-16 | 76.6 |
MS.gene071960.t1 | AT3G07810 | 34.177 | 79 | 51 | 1 | 8 | 86 | 109 | 186 | 9.35e-11 | 61.2 |
MS.gene071960.t1 | AT1G74230 | 47.368 | 76 | 39 | 1 | 8 | 83 | 35 | 109 | 5.79e-16 | 75.5 |
MS.gene071960.t1 | AT3G13224 | 37.500 | 104 | 62 | 1 | 8 | 108 | 101 | 204 | 5.81e-16 | 76.3 |
MS.gene071960.t1 | AT3G07810 | 39.130 | 92 | 51 | 2 | 3 | 94 | 2 | 88 | 5.93e-16 | 76.6 |
MS.gene071960.t1 | AT1G76460 | 53.448 | 58 | 27 | 0 | 3 | 60 | 20 | 77 | 6.64e-16 | 75.1 |
MS.gene071960.t1 | AT1G22910 | 46.575 | 73 | 38 | 1 | 1 | 72 | 7 | 79 | 1.29e-15 | 73.9 |
MS.gene071960.t1 | AT1G22910 | 46.575 | 73 | 38 | 1 | 1 | 72 | 7 | 79 | 1.78e-15 | 73.6 |
MS.gene071960.t1 | AT1G60650 | 38.679 | 106 | 47 | 2 | 39 | 140 | 1 | 92 | 2.20e-15 | 73.2 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.21e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.21e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.21e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.21e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.21e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.46e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.46e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.46e-15 | 74.7 |
MS.gene071960.t1 | AT5G55550 | 42.045 | 88 | 49 | 1 | 8 | 95 | 7 | 92 | 2.46e-15 | 74.7 |
MS.gene071960.t1 | AT3G20930 | 40.476 | 84 | 50 | 0 | 8 | 91 | 283 | 366 | 4.13e-15 | 73.9 |
MS.gene071960.t1 | AT2G37510 | 48.649 | 74 | 38 | 0 | 8 | 81 | 35 | 108 | 1.66e-14 | 68.6 |
MS.gene071960.t1 | AT1G22910 | 46.575 | 73 | 38 | 1 | 1 | 72 | 7 | 79 | 1.95e-14 | 71.6 |
MS.gene071960.t1 | AT1G73530 | 31.731 | 104 | 68 | 1 | 8 | 111 | 78 | 178 | 2.03e-14 | 69.3 |
MS.gene071960.t1 | AT1G20880 | 47.297 | 74 | 38 | 1 | 3 | 76 | 20 | 92 | 2.11e-14 | 70.9 |
MS.gene071960.t1 | AT1G20880 | 47.297 | 74 | 38 | 1 | 3 | 76 | 20 | 92 | 2.11e-14 | 70.9 |
MS.gene071960.t1 | AT1G20880 | 47.297 | 74 | 38 | 1 | 3 | 76 | 20 | 92 | 2.11e-14 | 70.9 |
MS.gene071960.t1 | AT5G47320 | 40.217 | 92 | 53 | 1 | 8 | 97 | 32 | 123 | 2.49e-14 | 69.7 |
MS.gene071960.t1 | AT5G47620 | 41.667 | 84 | 44 | 2 | 8 | 91 | 7 | 85 | 2.49e-14 | 71.6 |
MS.gene071960.t1 | AT5G47620 | 41.667 | 84 | 44 | 2 | 8 | 91 | 7 | 85 | 2.49e-14 | 71.6 |
MS.gene071960.t1 | AT5G47620 | 41.667 | 84 | 44 | 2 | 8 | 91 | 7 | 85 | 2.49e-14 | 71.6 |
MS.gene071960.t1 | AT1G60000 | 44.304 | 79 | 44 | 0 | 6 | 84 | 176 | 254 | 2.53e-14 | 70.5 |
MS.gene071960.t1 | AT4G14300 | 32.576 | 132 | 80 | 4 | 3 | 134 | 2 | 124 | 2.73e-14 | 71.6 |
MS.gene071960.t1 | AT4G14300 | 32.911 | 79 | 52 | 1 | 8 | 86 | 111 | 188 | 3.66e-11 | 62.4 |
MS.gene071960.t1 | AT4G14300 | 32.576 | 132 | 80 | 4 | 3 | 134 | 2 | 124 | 2.73e-14 | 71.6 |
MS.gene071960.t1 | AT4G14300 | 32.911 | 79 | 52 | 1 | 8 | 86 | 111 | 188 | 3.66e-11 | 62.4 |
MS.gene071960.t1 | AT2G27330 | 31.915 | 94 | 64 | 0 | 9 | 102 | 23 | 116 | 3.96e-14 | 67.0 |
MS.gene071960.t1 | AT1G22330 | 39.189 | 74 | 44 | 1 | 3 | 76 | 13 | 85 | 5.76e-14 | 70.1 |
MS.gene071960.t1 | AT5G50250 | 43.590 | 78 | 44 | 0 | 7 | 84 | 207 | 284 | 5.89e-14 | 69.7 |
MS.gene071960.t1 | AT5G50250 | 35.632 | 87 | 56 | 0 | 5 | 91 | 111 | 197 | 3.23e-12 | 65.1 |
MS.gene071960.t1 | AT4G13860 | 42.466 | 73 | 42 | 0 | 8 | 80 | 4 | 76 | 7.66e-14 | 65.5 |
MS.gene071960.t1 | AT1G78260 | 39.189 | 74 | 44 | 1 | 3 | 76 | 13 | 85 | 2.36e-13 | 68.2 |
MS.gene071960.t1 | AT3G54770 | 46.875 | 64 | 34 | 0 | 3 | 66 | 13 | 76 | 2.47e-13 | 67.8 |
MS.gene071960.t1 | AT3G54770 | 46.875 | 64 | 34 | 0 | 3 | 66 | 13 | 76 | 2.79e-13 | 67.8 |
MS.gene071960.t1 | AT3G20930 | 38.202 | 89 | 50 | 1 | 8 | 91 | 283 | 371 | 5.53e-13 | 67.8 |
MS.gene071960.t1 | AT5G55550 | 45.070 | 71 | 37 | 1 | 8 | 78 | 7 | 75 | 6.15e-13 | 67.8 |
MS.gene071960.t1 | AT5G55550 | 45.070 | 71 | 37 | 1 | 8 | 78 | 7 | 75 | 6.45e-13 | 67.8 |
MS.gene071960.t1 | AT3G08000 | 46.053 | 76 | 41 | 0 | 8 | 83 | 42 | 117 | 7.34e-13 | 64.3 |
MS.gene071960.t1 | AT5G47620 | 35.955 | 89 | 55 | 1 | 3 | 91 | 2 | 88 | 9.78e-13 | 67.0 |
MS.gene071960.t1 | AT1G17640 | 32.258 | 93 | 61 | 1 | 8 | 100 | 67 | 157 | 1.08e-12 | 67.0 |
MS.gene071960.t1 | AT1G17640 | 32.258 | 93 | 61 | 1 | 8 | 100 | 67 | 157 | 1.08e-12 | 67.0 |
MS.gene071960.t1 | AT1G17640 | 32.258 | 93 | 61 | 1 | 8 | 100 | 67 | 157 | 1.08e-12 | 67.0 |
MS.gene071960.t1 | AT5G53720 | 42.308 | 78 | 44 | 1 | 6 | 83 | 8 | 84 | 1.61e-12 | 62.4 |
MS.gene071960.t1 | AT1G78260 | 39.189 | 74 | 44 | 1 | 3 | 76 | 13 | 85 | 1.69e-12 | 65.5 |
MS.gene071960.t1 | AT2G21690 | 39.706 | 68 | 41 | 0 | 1 | 68 | 1 | 68 | 3.68e-12 | 61.6 |
MS.gene071960.t1 | AT3G52380 | 36.842 | 76 | 48 | 0 | 8 | 83 | 220 | 295 | 6.80e-12 | 64.3 |
MS.gene071960.t1 | AT3G52380 | 33.051 | 118 | 67 | 3 | 8 | 118 | 117 | 229 | 7.62e-12 | 64.3 |
MS.gene071960.t1 | AT1G03457 | 38.356 | 73 | 45 | 0 | 9 | 81 | 227 | 299 | 1.02e-11 | 63.9 |
MS.gene071960.t1 | AT3G13224 | 40.000 | 75 | 45 | 0 | 8 | 82 | 110 | 184 | 1.27e-11 | 62.8 |
MS.gene071960.t1 | AT5G19030 | 40.000 | 80 | 48 | 0 | 10 | 89 | 80 | 159 | 1.48e-11 | 61.2 |
MS.gene071960.t1 | AT1G03457 | 38.889 | 72 | 44 | 0 | 10 | 81 | 342 | 413 | 2.29e-11 | 63.2 |
MS.gene071960.t1 | AT1G03457 | 38.356 | 73 | 45 | 0 | 9 | 81 | 332 | 404 | 2.41e-11 | 63.2 |
MS.gene071960.t1 | AT3G47120 | 28.696 | 115 | 73 | 2 | 9 | 122 | 38 | 144 | 2.47e-11 | 62.4 |
MS.gene071960.t1 | AT5G40490 | 35.443 | 79 | 51 | 0 | 8 | 86 | 131 | 209 | 2.49e-11 | 63.2 |
MS.gene071960.t1 | AT3G47120 | 28.696 | 115 | 73 | 2 | 9 | 122 | 38 | 144 | 2.79e-11 | 62.8 |
MS.gene071960.t1 | AT2G33410 | 34.286 | 70 | 46 | 0 | 3 | 72 | 2 | 71 | 3.65e-11 | 62.4 |
MS.gene071960.t1 | AT3G06970 | 38.272 | 81 | 49 | 1 | 3 | 83 | 8 | 87 | 4.11e-11 | 62.0 |
MS.gene071960.t1 | AT4G13850 | 33.577 | 137 | 50 | 2 | 8 | 142 | 36 | 133 | 8.83e-11 | 58.9 |
Find 93 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGGGCGTTCTCGTGGTTT+TGG | 0.181319 | 2.4:-74777235 | MS.gene071960:CDS |
CGCAATCGTAGCCGAGATTA+TGG | 0.231031 | 2.4:-74777052 | MS.gene071960:CDS |
GGTGGGCGCGACAGGGATTC+TGG | 0.257534 | 2.4:-74776866 | MS.gene071960:CDS |
GGGATGGTGGTGGGCGTGAC+AGG | 0.302789 | 2.4:-74776748 | MS.gene071960:CDS |
GGGATGGCGGTGGGCGTGAC+AGG | 0.307692 | 2.4:-74776769 | MS.gene071960:CDS |
GCTCTTATGGTGGGCGCGAC+AGG | 0.315939 | 2.4:-74776874 | MS.gene071960:CDS |
CCTCCTCTTTCTCCTTCACT+AGG | 0.321904 | 2.4:+74776959 | None:intergenic |
GTGGTGGTTGACAAATTCTC+TGG | 0.342986 | 2.4:-74777253 | MS.gene071960:CDS |
GGGATGGCGGTGGTCGTGAT+AGG | 0.344211 | 2.4:-74776811 | MS.gene071960:CDS |
GGGATGGTGGTGGTCGTGAT+AGG | 0.344211 | 2.4:-74776832 | MS.gene071960:CDS |
CCGTATGAGCGTCGTGGATC+TGG | 0.346433 | 2.4:-74776707 | MS.gene071960:CDS |
ATCTCTAGATCCTTGTGGTT+GGG | 0.361996 | 2.4:+74777117 | None:intergenic |
GAGCGATCTGCATTCCTATC+AGG | 0.364268 | 2.4:+74776893 | None:intergenic |
GATGAGTTTCGTTGCTTCAT+TGG | 0.366302 | 2.4:-74778044 | MS.gene071960:CDS |
GGGCGTGACAGGGATGGTGG+TGG | 0.385485 | 2.4:-74776758 | MS.gene071960:CDS |
AGGAATGCAGATCGCTCTTA+TGG | 0.388029 | 2.4:-74776887 | MS.gene071960:CDS |
GGAGAAAGAGGAGGAAGGTA+TGG | 0.416433 | 2.4:-74776950 | MS.gene071960:CDS |
GGGATTCTGGTGGTCGTGAC+AGG | 0.420547 | 2.4:-74776853 | MS.gene071960:CDS |
GGGATGGCGGTGGACGTGAC+AGG | 0.434655 | 2.4:-74776790 | MS.gene071960:CDS |
GGAGGTAGTCGAGGGTCTAA+TGG | 0.442975 | 2.4:-74777031 | MS.gene071960:CDS |
GGTGGGCGTGACAGGGATGG+TGG | 0.446830 | 2.4:-74776761 | MS.gene071960:CDS |
GTGAGTCACGACCACGTTCT+CGG | 0.471685 | 2.4:+74777080 | None:intergenic |
AAAGATGCATTTGAAAAGTA+CGG | 0.478989 | 2.4:-74777987 | MS.gene071960:CDS |
GGCAGAGAAAGTAGATATAG+TGG | 0.479639 | 2.4:-74776926 | MS.gene071960:CDS |
GGACGTGACAGGGATGGCGG+TGG | 0.479797 | 2.4:-74776779 | MS.gene071960:CDS |
CATCTCTAGATCCTTGTGGT+TGG | 0.481683 | 2.4:+74777116 | None:intergenic |
CTCCTCTTTCTCCTTCACTA+GGG | 0.489943 | 2.4:+74776960 | None:intergenic |
GGCGTGACAGGGATGGTGGT+GGG | 0.492470 | 2.4:-74776757 | MS.gene071960:CDS |
CTCTTATGGTGGGCGCGACA+GGG | 0.500774 | 2.4:-74776873 | MS.gene071960:CDS |
GAGTTTCGTTGCTTCATTGG+TGG | 0.502387 | 2.4:-74778041 | MS.gene071960:CDS |
TGCCCTAGTGAAGGAGAAAG+AGG | 0.503529 | 2.4:-74776962 | MS.gene071960:CDS |
GAAAGAGGAGGAAGGTATGG+TGG | 0.504556 | 2.4:-74776947 | MS.gene071960:CDS |
CACTCCCTTGCAAAATGACC+GGG | 0.506117 | 2.4:+74776983 | None:intergenic |
TGCTTTAAGTGTGGTAAACC+CGG | 0.508262 | 2.4:-74777001 | MS.gene071960:CDS |
GGATGGCGGTGGTCGTGATA+GGG | 0.515261 | 2.4:-74776810 | MS.gene071960:CDS |
AGTAGATATAGTGGTGGCTA+TGG | 0.515924 | 2.4:-74776917 | MS.gene071960:CDS |
GCACTCCCTTGCAAAATGAC+CGG | 0.518487 | 2.4:+74776982 | None:intergenic |
GGCTATGAATGGAATTGACT+TGG | 0.522243 | 2.4:-74777167 | MS.gene071960:CDS |
AAATTCTCTGGGCGTTCTCG+TGG | 0.522551 | 2.4:-74777241 | MS.gene071960:CDS |
GGATGGTGGTGGTCGTGATA+GGG | 0.522834 | 2.4:-74776831 | MS.gene071960:CDS |
GGTCGTGACAGGGATGGTGG+TGG | 0.527932 | 2.4:-74776842 | MS.gene071960:CDS |
GCTTCATTGGTGGCCTTGCA+TGG | 0.529203 | 2.4:-74778031 | MS.gene071960:CDS |
GAGGCTATTGAGGCTATGAA+TGG | 0.532703 | 2.4:-74777178 | MS.gene071960:CDS |
GGCGGTGGGCGTGACAGGGA+TGG | 0.543513 | 2.4:-74776764 | MS.gene071960:CDS |
CGGCAAGCTTGTTGAGGCAA+AGG | 0.545418 | 2.4:-74777967 | MS.gene071960:intron |
GGATGGTGGTGGGCGTGACA+GGG | 0.545644 | 2.4:-74776747 | MS.gene071960:CDS |
CTCGACTACCTCCATAATCT+CGG | 0.546127 | 2.4:+74777041 | None:intergenic |
AGCAATGGAAGAGGCTATTG+AGG | 0.547802 | 2.4:-74777188 | MS.gene071960:CDS |
ATTTGATGACAAGGAAGCAA+TGG | 0.550117 | 2.4:-74777203 | MS.gene071960:CDS |
GGATGGCGGTGGGCGTGACA+GGG | 0.550547 | 2.4:-74776768 | MS.gene071960:CDS |
TATCAGAAGTTGACCATGCA+AGG | 0.550661 | 2.4:+74778018 | None:intergenic |
GTAGTTTCAAATGTCGGATA+CGG | 0.558465 | 2.4:-74778066 | None:intergenic |
CCAGATCCACGACGCTCATA+CGG | 0.559082 | 2.4:+74776707 | None:intergenic |
GTGGTGGCTATGGTCCTGAT+AGG | 0.564092 | 2.4:-74776907 | MS.gene071960:CDS |
GGATGGCGGTGGACGTGACA+GGG | 0.565962 | 2.4:-74776789 | MS.gene071960:CDS |
GACAGGGATCGCGATCGTGC+GGG | 0.566766 | 2.4:-74776731 | MS.gene071960:CDS |
GGCGGTGGACGTGACAGGGA+TGG | 0.569612 | 2.4:-74776785 | MS.gene071960:CDS |
TGACAGGGATCGCGATCGTG+CGG | 0.569790 | 2.4:-74776732 | MS.gene071960:CDS |
GCAAGGGAGTGCCCTAGTGA+AGG | 0.574118 | 2.4:-74776971 | MS.gene071960:CDS |
GACGTGACAGGGATGGCGGT+GGG | 0.581614 | 2.4:-74776778 | MS.gene071960:CDS |
CGAGATTATGGAGGTAGTCG+AGG | 0.583349 | 2.4:-74777040 | MS.gene071960:CDS |
AATGCAGATCGCTCTTATGG+TGG | 0.584861 | 2.4:-74776884 | MS.gene071960:CDS |
GGTGGTCGTGACAGGGATGG+TGG | 0.589081 | 2.4:-74776845 | MS.gene071960:CDS |
TGGTGGTTGACAAATTCTCT+GGG | 0.595910 | 2.4:-74777252 | MS.gene071960:CDS |
GGATTCTGGTGGTCGTGACA+GGG | 0.596366 | 2.4:-74776852 | MS.gene071960:CDS |
TGACAAGGAAGCAATGGAAG+AGG | 0.600324 | 2.4:-74777197 | MS.gene071960:CDS |
GGTCGTGATAGGGATGGCGG+TGG | 0.600939 | 2.4:-74776800 | MS.gene071960:CDS |
ATGCAGATCGCTCTTATGGT+GGG | 0.607336 | 2.4:-74776883 | MS.gene071960:CDS |
GATGATCGTCACCGAGAACG+TGG | 0.610333 | 2.4:-74777091 | MS.gene071960:CDS |
TCTGGTGGTCGTGACAGGGA+TGG | 0.611424 | 2.4:-74776848 | MS.gene071960:CDS |
GTTTGTCACATTTGATGACA+AGG | 0.613183 | 2.4:-74777212 | MS.gene071960:CDS |
GGTGGACGTGACAGGGATGG+CGG | 0.615987 | 2.4:-74776782 | MS.gene071960:CDS |
GGCGGTGGTCGTGATAGGGA+TGG | 0.616824 | 2.4:-74776806 | MS.gene071960:CDS |
GTGAAGGAGAAAGAGGAGGA+AGG | 0.620131 | 2.4:-74776955 | MS.gene071960:CDS |
ATGAATGGAATTGACTTGGA+TGG | 0.625730 | 2.4:-74777163 | MS.gene071960:CDS |
GGTGGTGGTCGTGATAGGGA+TGG | 0.627036 | 2.4:-74776827 | MS.gene071960:CDS |
GAGATTATGGAGGTAGTCGA+GGG | 0.639832 | 2.4:-74777039 | MS.gene071960:CDS |
TCATCATCTCTAGATCCTTG+TGG | 0.641739 | 2.4:+74777112 | None:intergenic |
GGTCGTGATAGGGATGGCGG+TGG | 0.641846 | 2.4:-74776821 | MS.gene071960:CDS |
GGTGGTCGTGATAGGGATGG+CGG | 0.656307 | 2.4:-74776824 | MS.gene071960:CDS |
GGGCGCGACAGGGATTCTGG+TGG | 0.659692 | 2.4:-74776863 | MS.gene071960:CDS |
TATGAGCGTCGTGGATCTGG+AGG | 0.659825 | 2.4:-74776704 | MS.gene071960:CDS |
ATGGAATTGACTTGGATGGA+CGG | 0.661188 | 2.4:-74777159 | MS.gene071960:CDS |
AAAGTACGGCAAGCTTGTTG+AGG | 0.663446 | 2.4:-74777973 | MS.gene071960:CDS |
CCTAGTGAAGGAGAAAGAGG+AGG | 0.670336 | 2.4:-74776959 | MS.gene071960:CDS |
GCGGGACCGTATGAGCGTCG+TGG | 0.672558 | 2.4:-74776713 | MS.gene071960:CDS |
GTTGATAAAGCCCAACCACA+AGG | 0.676735 | 2.4:-74777127 | MS.gene071960:CDS |
AGAGAAAGTAGATATAGTGG+TGG | 0.687288 | 2.4:-74776923 | MS.gene071960:CDS |
AATCGTAGCCGAGATTATGG+AGG | 0.691072 | 2.4:-74777049 | MS.gene071960:CDS |
GGTAGTCGAGGGTCTAATGG+CGG | 0.694342 | 2.4:-74777028 | MS.gene071960:CDS |
GAAGCTAGAGGTATCAACGA+TGG | 0.695562 | 2.4:+74776681 | None:intergenic |
GGTGGTCGTGATAGGGATGG+CGG | 0.702840 | 2.4:-74776803 | MS.gene071960:CDS |
GGCGGTGAATGCTTTAAGTG+TGG | 0.713199 | 2.4:-74777010 | MS.gene071960:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAGAAAACCAATTTTATTAT+GGG | + | chr2.4:74777287-74777306 | None:intergenic | 15.0% |
!! | TAATCATTCATTGACATTTA+AGG | - | chr2.4:74777454-74777473 | MS.gene071960:intron | 20.0% |
!!! | CTTTTATTCATTGATAACAT+TGG | - | chr2.4:74776939-74776958 | MS.gene071960:CDS | 20.0% |
!!! | GTAGAAAACCAATTTTATTA+TGG | + | chr2.4:74777288-74777307 | None:intergenic | 20.0% |
!!! | TACTGAATTTATTTTGTAAG+TGG | - | chr2.4:74777305-74777324 | MS.gene071960:intron | 20.0% |
! | AAAAGAAAAATCACAGAAGT+TGG | + | chr2.4:74776924-74776943 | None:intergenic | 25.0% |
! | AAAATTAGCATACCAAACAT+AGG | - | chr2.4:74776998-74777017 | MS.gene071960:CDS | 25.0% |
! | AAAGATGCATTTGAAAAGTA+CGG | - | chr2.4:74776763-74776782 | MS.gene071960:CDS | 25.0% |
! | TCAAATTAGTCAATTCAAAC+AGG | - | chr2.4:74777261-74777280 | MS.gene071960:intron | 25.0% |
! | TGATAACATTGGATGAAAAA+TGG | - | chr2.4:74776950-74776969 | MS.gene071960:CDS | 25.0% |
AAACAGGCCCATAATAAAAT+TGG | - | chr2.4:74777277-74777296 | MS.gene071960:intron | 30.0% | |
AATTATACATGGAAGGTCAA+TGG | + | chr2.4:74777339-74777358 | None:intergenic | 30.0% | |
ACTTATAGCATCTATGAAAC+AGG | + | chr2.4:74777142-74777161 | None:intergenic | 30.0% | |
AGCATACAATTATACATGGA+AGG | + | chr2.4:74777346-74777365 | None:intergenic | 30.0% | |
AGCATGAAATTGTAACAAGA+TGG | + | chr2.4:74776856-74776875 | None:intergenic | 30.0% | |
ATTAGCAAGAAAATGTGTGA+TGG | + | chr2.4:74777435-74777454 | None:intergenic | 30.0% | |
CCATGTATAATTGTATGCTT+GGG | - | chr2.4:74777347-74777366 | MS.gene071960:intron | 30.0% | |
GTTATTTGTATGAGAGTGAA+AGG | + | chr2.4:74777380-74777399 | None:intergenic | 30.0% | |
TCCATGTATAATTGTATGCT+TGG | - | chr2.4:74777346-74777365 | MS.gene071960:intron | 30.0% | |
TTAGCAAGAAAATGTGTGAT+GGG | + | chr2.4:74777434-74777453 | None:intergenic | 30.0% | |
!!! | AAATATTTTGAGTTAGGTGG+TGG | - | chr2.4:74777481-74777500 | MS.gene071960:intron | 30.0% |
!!! | GCTAAATATTTTGAGTTAGG+TGG | - | chr2.4:74777478-74777497 | MS.gene071960:intron | 30.0% |
AGAGAAAGTAGATATAGTGG+TGG | - | chr2.4:74777827-74777846 | MS.gene071960:intron | 35.0% | |
AGGGGATGTATATAGTGAAA+GGG | + | chr2.4:74777402-74777421 | None:intergenic | 35.0% | |
CATCACCAATATCCTATGTT+TGG | + | chr2.4:74777013-74777032 | None:intergenic | 35.0% | |
CCCAAGCATACAATTATACA+TGG | + | chr2.4:74777350-74777369 | None:intergenic | 35.0% | |
CTACACTATCTATCCAAACA+TGG | + | chr2.4:74777036-74777055 | None:intergenic | 35.0% | |
GAAGTTGGCAAAAGTAAAGA+AGG | + | chr2.4:74776909-74776928 | None:intergenic | 35.0% | |
GCATACCAAACATAGGATAT+TGG | - | chr2.4:74777005-74777024 | MS.gene071960:CDS | 35.0% | |
! | AAGAAAATGTGTGATGGGAA+TGG | + | chr2.4:74777429-74777448 | None:intergenic | 35.0% |
! | AGAAAATGTGTGATGGGAAT+GGG | + | chr2.4:74777428-74777447 | None:intergenic | 35.0% |
! | ATTTGATGACAAGGAAGCAA+TGG | - | chr2.4:74777547-74777566 | MS.gene071960:intron | 35.0% |
! | GTTTGTCACATTTGATGACA+AGG | - | chr2.4:74777538-74777557 | MS.gene071960:intron | 35.0% |
!! | ATGAATGGAATTGACTTGGA+TGG | - | chr2.4:74777587-74777606 | MS.gene071960:intron | 35.0% |
!!! | GGCGCTAAATATTTTGAGTT+AGG | - | chr2.4:74777475-74777494 | MS.gene071960:intron | 35.0% |
AGTAGATATAGTGGTGGCTA+TGG | - | chr2.4:74777833-74777852 | MS.gene071960:intron | 40.0% | |
ATCTCTAGATCCTTGTGGTT+GGG | + | chr2.4:74777636-74777655 | None:intergenic | 40.0% | |
CAGGGGATGTATATAGTGAA+AGG | + | chr2.4:74777403-74777422 | None:intergenic | 40.0% | |
GATGAGTTTCGTTGCTTCAT+TGG | - | chr2.4:74776706-74776725 | MS.gene071960:CDS | 40.0% | |
GGCAGAGAAAGTAGATATAG+TGG | - | chr2.4:74777824-74777843 | MS.gene071960:intron | 40.0% | |
GGCTATGAATGGAATTGACT+TGG | - | chr2.4:74777583-74777602 | MS.gene071960:intron | 40.0% | |
TATCAGAAGTTGACCATGCA+AGG | + | chr2.4:74776735-74776754 | None:intergenic | 40.0% | |
TCATCATCTCTAGATCCTTG+TGG | + | chr2.4:74777641-74777660 | None:intergenic | 40.0% | |
TGGTGGTTGACAAATTCTCT+GGG | - | chr2.4:74777498-74777517 | MS.gene071960:intron | 40.0% | |
! | TGCTTTAAGTGTGGTAAACC+CGG | - | chr2.4:74777749-74777768 | MS.gene071960:intron | 40.0% |
!! | ATGGAATTGACTTGGATGGA+CGG | - | chr2.4:74777591-74777610 | MS.gene071960:intron | 40.0% |
!! | GATATTGGTGATGCCATGTT+TGG | - | chr2.4:74777020-74777039 | MS.gene071960:CDS | 40.0% |
!! | TAAACCCGGTCATTTTGCAA+GGG | - | chr2.4:74777763-74777782 | MS.gene071960:intron | 40.0% |
AATCGTAGCCGAGATTATGG+AGG | - | chr2.4:74777701-74777720 | MS.gene071960:intron | 45.0% | |
AATGCAGATCGCTCTTATGG+TGG | - | chr2.4:74777866-74777885 | MS.gene071960:intron | 45.0% | |
AGCAATGGAAGAGGCTATTG+AGG | - | chr2.4:74777562-74777581 | MS.gene071960:intron | 45.0% | |
AGGAATGCAGATCGCTCTTA+TGG | - | chr2.4:74777863-74777882 | MS.gene071960:intron | 45.0% | |
ATGCAGATCGCTCTTATGGT+GGG | - | chr2.4:74777867-74777886 | MS.gene071960:intron | 45.0% | |
CATCTCTAGATCCTTGTGGT+TGG | + | chr2.4:74777637-74777656 | None:intergenic | 45.0% | |
CTCCTCTTTCTCCTTCACTA+GGG | + | chr2.4:74777793-74777812 | None:intergenic | 45.0% | |
CTCGACTACCTCCATAATCT+CGG | + | chr2.4:74777712-74777731 | None:intergenic | 45.0% | |
GAGATTATGGAGGTAGTCGA+GGG | - | chr2.4:74777711-74777730 | MS.gene071960:intron | 45.0% | |
GAGGCTATTGAGGCTATGAA+TGG | - | chr2.4:74777572-74777591 | MS.gene071960:intron | 45.0% | |
GAGTTTCGTTGCTTCATTGG+TGG | - | chr2.4:74776709-74776728 | MS.gene071960:CDS | 45.0% | |
GTGGTGGTTGACAAATTCTC+TGG | - | chr2.4:74777497-74777516 | MS.gene071960:intron | 45.0% | |
TGACAAGGAAGCAATGGAAG+AGG | - | chr2.4:74777553-74777572 | MS.gene071960:intron | 45.0% | |
! | GTTGATAAAGCCCAACCACA+AGG | - | chr2.4:74777623-74777642 | MS.gene071960:intron | 45.0% |
!! | AAAGTACGGCAAGCTTGTTG+AGG | - | chr2.4:74776777-74776796 | MS.gene071960:CDS | 45.0% |
!! | GTAAACCCGGTCATTTTGCA+AGG | - | chr2.4:74777762-74777781 | MS.gene071960:intron | 45.0% |
AAATTCTCTGGGCGTTCTCG+TGG | - | chr2.4:74777509-74777528 | MS.gene071960:intron | 50.0% | |
AAGCCATCCTAGAGAGCTTC+TGG | - | chr2.4:74777171-74777190 | MS.gene071960:CDS | 50.0% | |
CACTCCCTTGCAAAATGACC+GGG | + | chr2.4:74777770-74777789 | None:intergenic | 50.0% | |
CCTAGTGAAGGAGAAAGAGG+AGG | - | chr2.4:74777791-74777810 | MS.gene071960:intron | 50.0% | |
CCTCCTCTTTCTCCTTCACT+AGG | + | chr2.4:74777794-74777813 | None:intergenic | 50.0% | |
CGAGATTATGGAGGTAGTCG+AGG | - | chr2.4:74777710-74777729 | MS.gene071960:intron | 50.0% | |
CGCAATCGTAGCCGAGATTA+TGG | - | chr2.4:74777698-74777717 | MS.gene071960:intron | 50.0% | |
GAGCGATCTGCATTCCTATC+AGG | + | chr2.4:74777860-74777879 | None:intergenic | 50.0% | |
GCACTCCCTTGCAAAATGAC+CGG | + | chr2.4:74777771-74777790 | None:intergenic | 50.0% | |
GGAGAAAGAGGAGGAAGGTA+TGG | - | chr2.4:74777800-74777819 | MS.gene071960:intron | 50.0% | |
GTCATGTCCAGAAGCTCTCT+AGG | + | chr2.4:74777181-74777200 | None:intergenic | 50.0% | |
GTGAAGGAGAAAGAGGAGGA+AGG | - | chr2.4:74777795-74777814 | MS.gene071960:intron | 50.0% | |
TGCCCTAGTGAAGGAGAAAG+AGG | - | chr2.4:74777788-74777807 | MS.gene071960:intron | 50.0% | |
! | GAAAGAGGAGGAAGGTATGG+TGG | - | chr2.4:74777803-74777822 | MS.gene071960:intron | 50.0% |
! | GGCGGTGAATGCTTTAAGTG+TGG | - | chr2.4:74777740-74777759 | MS.gene071960:intron | 50.0% |
! | GTGTGATGGGAATGGGATCA+GGG | + | chr2.4:74777421-74777440 | None:intergenic | 50.0% |
! | TGTCCAGAAGCTCTCTAGGA+TGG | + | chr2.4:74777177-74777196 | None:intergenic | 50.0% |
! | TGTGATGGGAATGGGATCAG+GGG | + | chr2.4:74777420-74777439 | None:intergenic | 50.0% |
! | TGTGTGATGGGAATGGGATC+AGG | + | chr2.4:74777422-74777441 | None:intergenic | 50.0% |
CCAGATCCACGACGCTCATA+CGG | + | chr2.4:74778046-74778065 | None:intergenic | 55.0% | |
GATGATCGTCACCGAGAACG+TGG | - | chr2.4:74777659-74777678 | MS.gene071960:intron | 55.0% | |
GGAGGTAGTCGAGGGTCTAA+TGG | - | chr2.4:74777719-74777738 | MS.gene071960:intron | 55.0% | |
GGATTCTGGTGGTCGTGACA+GGG | - | chr2.4:74777898-74777917 | MS.gene071960:intron | 55.0% | |
GGTAGTCGAGGGTCTAATGG+CGG | - | chr2.4:74777722-74777741 | MS.gene071960:intron | 55.0% | |
GTGAGTCACGACCACGTTCT+CGG | + | chr2.4:74777673-74777692 | None:intergenic | 55.0% | |
GTGGTGGCTATGGTCCTGAT+AGG | - | chr2.4:74777843-74777862 | MS.gene071960:intron | 55.0% | |
! | CTGGGCGTTCTCGTGGTTTT+GGG | - | chr2.4:74777516-74777535 | MS.gene071960:intron | 55.0% |
! | GCTTCATTGGTGGCCTTGCA+TGG | - | chr2.4:74776719-74776738 | MS.gene071960:CDS | 55.0% |
! | TATGAGCGTCGTGGATCTGG+AGG | - | chr2.4:74778046-74778065 | MS.gene071960:CDS | 55.0% |
! | TCTGGGCGTTCTCGTGGTTT+TGG | - | chr2.4:74777515-74777534 | MS.gene071960:intron | 55.0% |
!! | CGGCAAGCTTGTTGAGGCAA+AGG | - | chr2.4:74776783-74776802 | MS.gene071960:CDS | 55.0% |
!! | GGATGGTGGTGGTCGTGATA+GGG | - | chr2.4:74777919-74777938 | MS.gene071960:intron | 55.0% |
GGGATTCTGGTGGTCGTGAC+AGG | - | chr2.4:74777897-74777916 | MS.gene071960:intron | 60.0% | |
GGTGGTCGTGATAGGGATGG+CGG | - | chr2.4:74777926-74777945 | MS.gene071960:intron | 60.0% | |
TCTGGTGGTCGTGACAGGGA+TGG | - | chr2.4:74777902-74777921 | MS.gene071960:intron | 60.0% | |
TGACAGGGATCGCGATCGTG+CGG | - | chr2.4:74778018-74778037 | MS.gene071960:CDS | 60.0% | |
! | CCGTATGAGCGTCGTGGATC+TGG | - | chr2.4:74778043-74778062 | MS.gene071960:CDS | 60.0% |
! | GGATGGCGGTGGTCGTGATA+GGG | - | chr2.4:74777940-74777959 | MS.gene071960:intron | 60.0% |
! | GGTGGTGGTCGTGATAGGGA+TGG | - | chr2.4:74777923-74777942 | MS.gene071960:intron | 60.0% |
!! | CTCTTATGGTGGGCGCGACA+GGG | - | chr2.4:74777877-74777896 | MS.gene071960:intron | 60.0% |
!! | GCAAGGGAGTGCCCTAGTGA+AGG | - | chr2.4:74777779-74777798 | MS.gene071960:intron | 60.0% |
!! | GGGATGGTGGTGGTCGTGAT+AGG | - | chr2.4:74777918-74777937 | MS.gene071960:intron | 60.0% |
GACAGGGATCGCGATCGTGC+GGG | - | chr2.4:74778019-74778038 | MS.gene071960:CDS | 65.0% | |
GGCGGTGGTCGTGATAGGGA+TGG | - | chr2.4:74777944-74777963 | MS.gene071960:intron | 65.0% | |
GGTGGACGTGACAGGGATGG+CGG | - | chr2.4:74777968-74777987 | MS.gene071960:CDS | 65.0% | |
GGTGGTCGTGACAGGGATGG+TGG | - | chr2.4:74777905-74777924 | MS.gene071960:intron | 65.0% | |
! | GACGTGACAGGGATGGCGGT+GGG | - | chr2.4:74777972-74777991 | MS.gene071960:CDS | 65.0% |
! | GGATGGCGGTGGACGTGACA+GGG | - | chr2.4:74777961-74777980 | MS.gene071960:intron | 65.0% |
! | GGCGTGACAGGGATGGTGGT+GGG | - | chr2.4:74777993-74778012 | MS.gene071960:CDS | 65.0% |
! | GGGATGGCGGTGGTCGTGAT+AGG | - | chr2.4:74777939-74777958 | MS.gene071960:intron | 65.0% |
! | GGTCGTGACAGGGATGGTGG+TGG | - | chr2.4:74777908-74777927 | MS.gene071960:intron | 65.0% |
! | GGTCGTGATAGGGATGGCGG+TGG | - | chr2.4:74777929-74777948 | MS.gene071960:intron | 65.0% |
!! | GCTCTTATGGTGGGCGCGAC+AGG | - | chr2.4:74777876-74777895 | MS.gene071960:intron | 65.0% |
!! | GGATGGTGGTGGGCGTGACA+GGG | - | chr2.4:74778003-74778022 | MS.gene071960:CDS | 65.0% |
GGCGGTGGACGTGACAGGGA+TGG | - | chr2.4:74777965-74777984 | MS.gene071960:intron | 70.0% | |
GGGCGCGACAGGGATTCTGG+TGG | - | chr2.4:74777887-74777906 | MS.gene071960:intron | 70.0% | |
GGTGGGCGCGACAGGGATTC+TGG | - | chr2.4:74777884-74777903 | MS.gene071960:intron | 70.0% | |
GGTGGGCGTGACAGGGATGG+TGG | - | chr2.4:74777989-74778008 | MS.gene071960:CDS | 70.0% | |
! | GCGGGACCGTATGAGCGTCG+TGG | - | chr2.4:74778037-74778056 | MS.gene071960:CDS | 70.0% |
! | GGACGTGACAGGGATGGCGG+TGG | - | chr2.4:74777971-74777990 | MS.gene071960:CDS | 70.0% |
! | GGATGGCGGTGGGCGTGACA+GGG | - | chr2.4:74777982-74778001 | MS.gene071960:CDS | 70.0% |
! | GGGATGGCGGTGGACGTGAC+AGG | - | chr2.4:74777960-74777979 | MS.gene071960:intron | 70.0% |
! | GGGCGTGACAGGGATGGTGG+TGG | - | chr2.4:74777992-74778011 | MS.gene071960:CDS | 70.0% |
!! | GGGATGGTGGTGGGCGTGAC+AGG | - | chr2.4:74778002-74778021 | MS.gene071960:CDS | 70.0% |
GGCGGTGGGCGTGACAGGGA+TGG | - | chr2.4:74777986-74778005 | MS.gene071960:CDS | 75.0% | |
! | GGGATGGCGGTGGGCGTGAC+AGG | - | chr2.4:74777981-74778000 | MS.gene071960:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 74776694 | 74778078 | 74776694 | ID=MS.gene071960 |
chr2.4 | mRNA | 74776694 | 74778078 | 74776694 | ID=MS.gene071960.t1;Parent=MS.gene071960 |
chr2.4 | exon | 74777968 | 74778078 | 74777968 | ID=MS.gene071960.t1.exon1;Parent=MS.gene071960.t1 |
chr2.4 | CDS | 74777968 | 74778078 | 74777968 | ID=cds.MS.gene071960.t1;Parent=MS.gene071960.t1 |
chr2.4 | exon | 74776694 | 74777275 | 74776694 | ID=MS.gene071960.t1.exon2;Parent=MS.gene071960.t1 |
chr2.4 | CDS | 74776694 | 74777275 | 74776694 | ID=cds.MS.gene071960.t1;Parent=MS.gene071960.t1 |
Gene Sequence |
Protein sequence |