Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072584.t1 | XP_003626158.1 | 98.9 | 369 | 4 | 0 | 1 | 369 | 111 | 479 | 2.10E-208 | 734.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072584.t1 | Q8LEB6 | 75.8 | 355 | 81 | 1 | 20 | 369 | 96 | 450 | 2.7e-156 | 553.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072584.t1 | G7KWG4 | 98.9 | 369 | 4 | 0 | 1 | 369 | 111 | 479 | 1.5e-208 | 734.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene072584 | -0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene049195 | MS.gene072584 | 0.833964 | 3.94E-56 | -1.69E-46 |
| MS.gene04933 | MS.gene072584 | 0.828191 | 1.03E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene072584 | 0.815993 | 6.95E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene072584 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene050330 | MS.gene072584 | -0.810045 | 1.40E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene072584 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene072584 | 0.843509 | 1.34E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene072584 | 0.8219 | 3.16E-53 | -1.69E-46 |
| MS.gene050787 | MS.gene072584 | 0.976992 | 6.72E-143 | -1.69E-46 |
| MS.gene050820 | MS.gene072584 | 0.832306 | 1.02E-55 | -1.69E-46 |
| MS.gene05119 | MS.gene072584 | -0.830941 | 2.21E-55 | -1.69E-46 |
| MS.gene051265 | MS.gene072584 | 0.816231 | 6.15E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene072584 | 0.855531 | 5.93E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene072584 | -0.819079 | 1.40E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene072584 | 0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene052207 | MS.gene072584 | 0.827265 | 1.72E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene072584 | 0.813406 | 2.60E-51 | -1.69E-46 |
| MS.gene052361 | MS.gene072584 | -0.810838 | 9.44E-51 | -1.69E-46 |
| MS.gene052389 | MS.gene072584 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene072584 | 0.846216 | 2.50E-59 | -1.69E-46 |
| MS.gene054183 | MS.gene072584 | 0.82332 | 1.48E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene072584 | -0.810633 | 1.05E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene072584 | 0.823027 | 1.73E-53 | -1.69E-46 |
| MS.gene054468 | MS.gene072584 | 0.850522 | 1.61E-60 | -1.69E-46 |
| MS.gene054473 | MS.gene072584 | 0.890266 | 1.15E-73 | -1.69E-46 |
| MS.gene054930 | MS.gene072584 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene072584 | 0.804515 | 2.08E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene072584 | 0.854633 | 1.08E-61 | -1.69E-46 |
| MS.gene055358 | MS.gene072584 | 0.869761 | 2.43E-66 | -1.69E-46 |
| MS.gene056069 | MS.gene072584 | -0.806331 | 8.67E-50 | -1.69E-46 |
| MS.gene056297 | MS.gene072584 | 0.814423 | 1.55E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene072584 | 0.810775 | 9.74E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene072584 | 0.802904 | 4.50E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene072584 | 0.866684 | 2.38E-65 | -1.69E-46 |
| MS.gene058710 | MS.gene072584 | 0.816716 | 4.79E-52 | -1.69E-46 |
| MS.gene058739 | MS.gene072584 | 0.834778 | 2.46E-56 | -1.69E-46 |
| MS.gene058792 | MS.gene072584 | 0.818446 | 1.95E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene072584 | 0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene059033 | MS.gene072584 | -0.801397 | 9.18E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene072584 | 0.832404 | 9.64E-56 | -1.69E-46 |
| MS.gene059896 | MS.gene072584 | -0.807597 | 4.68E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene072584 | -0.806779 | 6.97E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene072584 | 0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene072584 | -0.834837 | 2.38E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene072584 | -0.842502 | 2.49E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACTAATATTATGTCTTT+GGG | - | 51800:34975-34994 | MS.gene072584:intron | 15.0% |
| !! | TATTACAATATCATATATGT+TGG | - | 51800:36419-36438 | MS.gene072584:CDS | 15.0% |
| !!! | AATATATTTTTCCTCATATA+TGG | - | 51800:34328-34347 | MS.gene072584:CDS | 15.0% |
| !!! | CTTTATTAAATAATTTTTGC+CGG | - | 51800:34261-34280 | MS.gene072584:intron | 15.0% |
| !!! | GAAGATTAATCTTATAATTT+TGG | - | 51800:36910-36929 | MS.gene072584:CDS | 15.0% |
| !!! | TTTTTTCAAAATGAATTTAC+TGG | - | 51800:36937-36956 | MS.gene072584:CDS | 15.0% |
| !! | ATTATGATTACCATTTATTC+CGG | + | 51800:34283-34302 | None:intergenic | 20.0% |
| !! | CAAAATGTTGTTAAAAAGTA+AGG | + | 51800:35611-35630 | None:intergenic | 20.0% |
| !! | CAAATTAAAACTAAATCTAG+AGG | + | 51800:35799-35818 | None:intergenic | 20.0% |
| !! | GTAAACTAATATTATGTCTT+TGG | - | 51800:34974-34993 | MS.gene072584:intron | 20.0% |
| !! | TAAAATAAGTCAATCCAAAA+AGG | + | 51800:33800-33819 | None:intergenic | 20.0% |
| !! | TAATGATTTAATGATGAAGT+GGG | + | 51800:36269-36288 | None:intergenic | 20.0% |
| !! | TATGATATTGTAATACTAGA+CGG | + | 51800:36414-36433 | None:intergenic | 20.0% |
| !! | TTAATGATTTAATGATGAAG+TGG | + | 51800:36270-36289 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCATAGACTATGA+TGG | + | 51800:33925-33944 | None:intergenic | 20.0% |
| !!! | GAATTTTCAGTCTAATAATA+AGG | + | 51800:34021-34040 | None:intergenic | 20.0% |
| !!! | TACTTTTGTAATTGAGAATA+TGG | + | 51800:34186-34205 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGGGTTTATGTAT+AGG | + | 51800:33981-34000 | None:intergenic | 20.0% |
| !!! | TTTTGTTACTTATTTCTACA+TGG | - | 51800:35962-35981 | MS.gene072584:CDS | 20.0% |
| ! | AAACTCTAGTATAATAGTAG+GGG | + | 51800:35529-35548 | None:intergenic | 25.0% |
| ! | AAGTATAACAATACTTAGCA+AGG | + | 51800:34770-34789 | None:intergenic | 25.0% |
| ! | AATGATTTAATGATGAAGTG+GGG | + | 51800:36268-36287 | None:intergenic | 25.0% |
| ! | ACAAACTCTAGTATAATAGT+AGG | + | 51800:35531-35550 | None:intergenic | 25.0% |
| ! | AGATTCATTTCATCAATACA+TGG | - | 51800:33422-33441 | MS.gene072584:CDS | 25.0% |
| ! | AGTATAACAATACTTAGCAA+GGG | + | 51800:34769-34788 | None:intergenic | 25.0% |
| ! | CAAACTCTAGTATAATAGTA+GGG | + | 51800:35530-35549 | None:intergenic | 25.0% |
| ! | CAAGTATATTGCTTTATACA+AGG | + | 51800:34527-34546 | None:intergenic | 25.0% |
| ! | TAAAGCAATATACTTGTTTC+AGG | - | 51800:34531-34550 | MS.gene072584:intron | 25.0% |
| ! | TATTCAATATTGTGCATTTG+TGG | - | 51800:35078-35097 | MS.gene072584:intron | 25.0% |
| !! | ACAAAAAAAAAGTCTTGTAG+TGG | + | 51800:36749-36768 | None:intergenic | 25.0% |
| !! | ACATGGAAACTTTTTATCAA+TGG | - | 51800:35979-35998 | MS.gene072584:CDS | 25.0% |
| !! | ACTTTTATTCTCAAATTGAC+CGG | + | 51800:35149-35168 | None:intergenic | 25.0% |
| !! | ATAATTTTTGCCGGAATAAA+TGG | - | 51800:34270-34289 | MS.gene072584:intron | 25.0% |
| !! | CTAAATTTTTGACAGATATG+TGG | - | 51800:34825-34844 | MS.gene072584:intron | 25.0% |
| !! | TTTAGAATCAATGGTTTACT+GGG | - | 51800:37141-37160 | MS.gene072584:CDS | 25.0% |
| !! | TTTTTAACCATAACCTCATT+AGG | - | 51800:35278-35297 | MS.gene072584:intron | 25.0% |
| !!! | ATTTTTTCATTGTCATGTTC+AGG | - | 51800:36966-36985 | MS.gene072584:CDS | 25.0% |
| !!! | CACAAGAGCATATTTTAAAA+GGG | + | 51800:33993-34012 | None:intergenic | 25.0% |
| !!! | GGATTCTTTTTTAGAATCAA+TGG | - | 51800:37132-37151 | MS.gene072584:CDS | 25.0% |
| !!! | TTTTAAAATCATGTGTGTTG+AGG | + | 51800:34229-34248 | None:intergenic | 25.0% |
| !!! | TTTTAGAATCAATGGTTTAC+TGG | - | 51800:37140-37159 | MS.gene072584:CDS | 25.0% |
| AAACATTTCTCACTCTTCTA+TGG | - | 51800:35704-35723 | MS.gene072584:intron | 30.0% | |
| AAGAGTGATGTTTATAGCTT+TGG | - | 51800:34883-34902 | MS.gene072584:intron | 30.0% | |
| ACTGTTTGATTAAGATTGGA+CGG | - | 51800:36559-36578 | MS.gene072584:intron | 30.0% | |
| ATATTGTAATACTAGACGGT+TGG | + | 51800:36410-36429 | None:intergenic | 30.0% | |
| ATCCAAATCCATCATGATAA+TGG | + | 51800:36501-36520 | None:intergenic | 30.0% | |
| ATGATTTAATGATGAAGTGG+GGG | + | 51800:36267-36286 | None:intergenic | 30.0% | |
| CGCTAAGGAAAACAAAATTA+AGG | + | 51800:33777-33796 | None:intergenic | 30.0% | |
| CTAACATAGTAATAGACAGT+TGG | - | 51800:35770-35789 | MS.gene072584:intron | 30.0% | |
| CTGAAAACATACCATATATG+AGG | + | 51800:34342-34361 | None:intergenic | 30.0% | |
| GGTTATGGAGTTGTTTATAA+GGG | - | 51800:33669-33688 | MS.gene072584:intron | 30.0% | |
| GTCTATGAGTATGTCAATAA+TGG | - | 51800:34369-34388 | MS.gene072584:CDS | 30.0% | |
| TAACTATGAAGTATGAACTC+TGG | - | 51800:35849-35868 | MS.gene072584:CDS | 30.0% | |
| TATCCTCTGATAATAATTGC+CGG | + | 51800:35882-35901 | None:intergenic | 30.0% | |
| TGAAAATGATGGTTGGAAAT+AGG | - | 51800:36060-36079 | MS.gene072584:intron | 30.0% | |
| TGGTTATGGAGTTGTTTATA+AGG | - | 51800:33668-33687 | MS.gene072584:intron | 30.0% | |
| TTTCCGAAAAATTTATGTCG+TGG | - | 51800:36353-36372 | MS.gene072584:intron | 30.0% | |
| TTTGCGAAAGAAAATGTACT+TGG | - | 51800:33639-33658 | MS.gene072584:intron | 30.0% | |
| ! | AAAGAAAATGTACTTGGTGA+AGG | - | 51800:33645-33664 | MS.gene072584:intron | 30.0% |
| ! | AAATATTTTACCAGCAAGTC+AGG | - | 51800:36806-36825 | MS.gene072584:intron | 30.0% |
| ! | AATGCTAAGGTTTCTGATTT+TGG | - | 51800:34638-34657 | MS.gene072584:intron | 30.0% |
| ! | AGTTTAAAAGTGCACAGTAA+TGG | + | 51800:35738-35757 | None:intergenic | 30.0% |
| ! | ATAATGGAAACTTAGAGCAA+TGG | - | 51800:34385-34404 | MS.gene072584:CDS | 30.0% |
| ! | CTCATATATGGTATGTTTTC+AGG | - | 51800:34340-34359 | MS.gene072584:CDS | 30.0% |
| ! | GTTTATGTATAGGCTATTTC+TGG | + | 51800:33971-33990 | None:intergenic | 30.0% |
| ! | TTCTTTTGTGTGTATAACAG+TGG | - | 51800:34054-34073 | MS.gene072584:intron | 30.0% |
| !! | AAAAACTTGGTTCGACTTTT+GGG | - | 51800:34132-34151 | MS.gene072584:intron | 30.0% |
| !! | AGTATCTTTTTAACTGCAAC+TGG | + | 51800:33714-33733 | None:intergenic | 30.0% |
| !! | ATGTGTTTACTGTTTCTGAA+AGG | + | 51800:35378-35397 | None:intergenic | 30.0% |
| !! | CATTTTGAGTGTTACAGATA+AGG | - | 51800:35624-35643 | MS.gene072584:CDS | 30.0% |
| !! | GCACAAGAGCATATTTTAAA+AGG | + | 51800:33994-34013 | None:intergenic | 30.0% |
| !!! | CATGTTTCCTGTTTTTGAAA+GGG | + | 51800:35454-35473 | None:intergenic | 30.0% |
| !!! | TCATGTTTCCTGTTTTTGAA+AGG | + | 51800:35455-35474 | None:intergenic | 30.0% |
| AAATAGGAGATCAGAAGAAG+TGG | - | 51800:36076-36095 | MS.gene072584:CDS | 35.0% | |
| AACACTCATACAACTTCTGA+CGG | - | 51800:36380-36399 | MS.gene072584:CDS | 35.0% | |
| AACTAGACTCAGCATTCTAA+TGG | + | 51800:33753-33772 | None:intergenic | 35.0% | |
| AAGCTTACATCTAACACTTC+AGG | + | 51800:35054-35073 | None:intergenic | 35.0% | |
| AATACTAAGCCAAGTTAGTG+TGG | - | 51800:36313-36332 | MS.gene072584:intron | 35.0% | |
| AGAATTCTCTCACTTAGGTT+GGG | - | 51800:33572-33591 | MS.gene072584:intron | 35.0% | |
| AGCAGAGAAAGAATTTAGAG+TGG | - | 51800:34080-34099 | MS.gene072584:intron | 35.0% | |
| AGTTTACTCACTTCATTTGC+CGG | + | 51800:34961-34980 | None:intergenic | 35.0% | |
| ATCAATACATGGAGAGAGAT+GGG | - | 51800:33433-33452 | MS.gene072584:CDS | 35.0% | |
| ATGGTTTACTGGGATGTATA+AGG | - | 51800:37151-37170 | MS.gene072584:CDS | 35.0% | |
| CACACTATAAGACATGAAGT+TGG | - | 51800:36771-36790 | MS.gene072584:intron | 35.0% | |
| CATCACTCTTCTCATTTAGA+AGG | + | 51800:34873-34892 | None:intergenic | 35.0% | |
| CCAGACAATCGAAAACATAA+TGG | + | 51800:35226-35245 | None:intergenic | 35.0% | |
| CTATTACTATGTTAGAGCAC+AGG | + | 51800:35765-35784 | None:intergenic | 35.0% | |
| CTGGACTGTTTGATTAAGAT+TGG | - | 51800:36555-36574 | MS.gene072584:intron | 35.0% | |
| CTTAGCTAGTAACCATTGAA+AGG | + | 51800:35570-35589 | None:intergenic | 35.0% | |
| CTTAGGTGAATCTAGTTGAT+TGG | - | 51800:36036-36055 | MS.gene072584:intron | 35.0% | |
| GAAAAATTCACCACTCTCAA+GGG | + | 51800:34747-34766 | None:intergenic | 35.0% | |
| GAAACATGAACAACATTCTC+AGG | - | 51800:35466-35485 | MS.gene072584:intron | 35.0% | |
| GAGAGAGAGATTGAAATTGT+TGG | - | 51800:36459-36478 | MS.gene072584:CDS | 35.0% | |
| GAGAGATTGAAATTGTTGGA+AGG | - | 51800:36463-36482 | MS.gene072584:CDS | 35.0% | |
| TACTGTGTACAAACACTCTT+CGG | - | 51800:33506-33525 | MS.gene072584:CDS | 35.0% | |
| TCAGAGGATAGTTTATACAG+AGG | - | 51800:35892-35911 | MS.gene072584:CDS | 35.0% | |
| TCATGTCAGACACAAAAACT+TGG | - | 51800:34119-34138 | MS.gene072584:intron | 35.0% | |
| TCTCTCCATGCATATATTAG+CGG | + | 51800:36445-36464 | None:intergenic | 35.0% | |
| TCTGACGATGAATAAACAGT+TGG | + | 51800:36836-36855 | None:intergenic | 35.0% | |
| TGACGATGATTTCAATGCTA+AGG | - | 51800:34625-34644 | MS.gene072584:intron | 35.0% | |
| TGATTTAATGATGAAGTGGG+GGG | + | 51800:36266-36285 | None:intergenic | 35.0% | |
| TTAATCAAACAGTCCAGATG+TGG | + | 51800:36552-36571 | None:intergenic | 35.0% | |
| TTCTCAAATTGACCGGAAAA+AGG | + | 51800:35142-35161 | None:intergenic | 35.0% | |
| TTTGAGTGTTACAGATAAGG+TGG | - | 51800:35627-35646 | MS.gene072584:CDS | 35.0% | |
| ! | AACGAAAAGTATAGATGCAG+AGG | + | 51800:34493-34512 | None:intergenic | 35.0% |
| ! | AGTTGATTGGCTGAAAATGA+TGG | - | 51800:36049-36068 | MS.gene072584:intron | 35.0% |
| ! | CCATTATGTTTTCGATTGTC+TGG | - | 51800:35223-35242 | MS.gene072584:intron | 35.0% |
| ! | CCTCCACGACATAAATTTTT+CGG | + | 51800:36359-36378 | None:intergenic | 35.0% |
| ! | GTACATTTTCTTTCGCAAAC+CGG | + | 51800:33638-33657 | None:intergenic | 35.0% |
| ! | TGTTGCTTGACTTGATATCT+CGG | + | 51800:34598-34617 | None:intergenic | 35.0% |
| ! | TTAGGTCTTTTCTCAGAATC+TGG | + | 51800:36179-36198 | None:intergenic | 35.0% |
| !! | AAAACTTGGTTCGACTTTTG+GGG | - | 51800:34133-34152 | MS.gene072584:intron | 35.0% |
| !! | ATCAACCAGAGCTTTGAAAA+GGG | - | 51800:36124-36143 | MS.gene072584:CDS | 35.0% |
| !! | ATCTTGAACTTGCTACAAAC+CGG | - | 51800:33616-33635 | MS.gene072584:intron | 35.0% |
| !! | CAAAAACTTGGTTCGACTTT+TGG | - | 51800:34131-34150 | MS.gene072584:intron | 35.0% |
| !! | CAAATCCATCATGATAATGG+TGG | + | 51800:36498-36517 | None:intergenic | 35.0% |
| !! | CACCATTATCATGATGGATT+TGG | - | 51800:36496-36515 | MS.gene072584:intron | 35.0% |
| !! | CTTAACTGCTTTAAGATGTG+TGG | - | 51800:36151-36170 | MS.gene072584:CDS | 35.0% |
| !! | TAAGGTTTCTGATTTTGGTC+TGG | - | 51800:34643-34662 | MS.gene072584:intron | 35.0% |
| !!! | TAGCTTTGGTGTTTTGCTAT+TGG | - | 51800:34897-34916 | MS.gene072584:intron | 35.0% |
| !!! | TTTGGTGTTTTGCTATTGGA+AGG | - | 51800:34901-34920 | MS.gene072584:intron | 35.0% |
| AAACAAACCTCTCGTGCTAA+AGG | + | 51800:36242-36261 | None:intergenic | 40.0% | |
| AACAAACCTCTCGTGCTAAA+GGG | + | 51800:36241-36260 | None:intergenic | 40.0% | |
| AACATACCGAGCTTGAAATC+TGG | - | 51800:36621-36640 | MS.gene072584:intron | 40.0% | |
| AACTTAGAGCAATGGCTTCA+TGG | - | 51800:34393-34412 | MS.gene072584:CDS | 40.0% | |
| AAGTGCCACCATTATCATGA+TGG | - | 51800:36490-36509 | MS.gene072584:intron | 40.0% | |
| AATTGACCGGAAAAAGGATG+AGG | + | 51800:35136-35155 | None:intergenic | 40.0% | |
| ACACTCATACAACTTCTGAC+GGG | - | 51800:36381-36400 | MS.gene072584:CDS | 40.0% | |
| ACCATAACGTCATCCTAATG+AGG | + | 51800:35294-35313 | None:intergenic | 40.0% | |
| ACCTCATTAGGATGACGTTA+TGG | - | 51800:35290-35309 | MS.gene072584:intron | 40.0% | |
| ACGTCATCCTAATGAGGTTA+TGG | + | 51800:35288-35307 | None:intergenic | 40.0% | |
| AGACTGTTTGGAAGAGCTTA+CGG | - | 51800:33847-33866 | MS.gene072584:intron | 40.0% | |
| AGAGTGGAAGTTGAAGCTAT+TGG | - | 51800:34096-34115 | MS.gene072584:intron | 40.0% | |
| AGGACAGTCTAATCAAAGAC+CGG | + | 51800:36652-36671 | None:intergenic | 40.0% | |
| ATGGCTTCACCTCAATGTTT+GGG | + | 51800:36106-36125 | None:intergenic | 40.0% | |
| ATTGTCATGTTCAGGATCGA+AGG | - | 51800:36974-36993 | MS.gene072584:CDS | 40.0% | |
| CAACCTAAGTGAGAGAATTC+TGG | + | 51800:33573-33592 | None:intergenic | 40.0% | |
| CAGAATTCTCTCACTTAGGT+TGG | - | 51800:33571-33590 | MS.gene072584:intron | 40.0% | |
| CATCAATACATGGAGAGAGA+TGG | - | 51800:33432-33451 | MS.gene072584:CDS | 40.0% | |
| CATGTCACAACTCGAGTTAT+GGG | - | 51800:34692-34711 | MS.gene072584:intron | 40.0% | |
| CCGAAAAATTTATGTCGTGG+AGG | - | 51800:36356-36375 | MS.gene072584:intron | 40.0% | |
| CTAAGTGAGAGAATTCTGGA+AGG | + | 51800:33569-33588 | None:intergenic | 40.0% | |
| CTTCCAGAATTCTCTCACTT+AGG | - | 51800:33567-33586 | MS.gene072584:intron | 40.0% | |
| GCAAGAAAATACTGACCCAA+AGG | + | 51800:34720-34739 | None:intergenic | 40.0% | |
| GGAAAAATTCACCACTCTCA+AGG | + | 51800:34748-34767 | None:intergenic | 40.0% | |
| GGAAGAGATCCAGTTGATTA+TGG | - | 51800:34931-34950 | MS.gene072584:intron | 40.0% | |
| TAAGCTCTTGTGAGACTGTT+TGG | - | 51800:33835-33854 | MS.gene072584:intron | 40.0% | |
| TATAAGGGACAGCTGATCAA+TGG | - | 51800:33684-33703 | MS.gene072584:intron | 40.0% | |
| TCAATACATGGAGAGAGATG+GGG | - | 51800:33434-33453 | MS.gene072584:CDS | 40.0% | |
| TCATGTCACAACTCGAGTTA+TGG | - | 51800:34691-34710 | MS.gene072584:intron | 40.0% | |
| TCTTGCTGCATACCTTTCAA+TGG | - | 51800:35555-35574 | MS.gene072584:intron | 40.0% | |
| TGAAGAAGGTAGTTCAGGAA+CGG | - | 51800:33482-33501 | MS.gene072584:CDS | 40.0% | |
| TGAGCTGTTAAATCGCAGTT+AGG | - | 51800:35321-35340 | MS.gene072584:intron | 40.0% | |
| TGATAATAATTGCCGGTGCT+AGG | + | 51800:35875-35894 | None:intergenic | 40.0% | |
| TGGTTACTAGCTAAGCTTTG+TGG | - | 51800:35575-35594 | MS.gene072584:intron | 40.0% | |
| TGTGAAACGTCAATGCTCTT+AGG | - | 51800:36019-36038 | MS.gene072584:intron | 40.0% | |
| TGTTTGCAGTTATCCACATC+TGG | - | 51800:36536-36555 | MS.gene072584:intron | 40.0% | |
| TTGATTAGACTGTCCTGATG+TGG | - | 51800:36656-36675 | MS.gene072584:intron | 40.0% | |
| TTTGGTCTGGCCAAATTACT+GGG | - | 51800:34656-34675 | MS.gene072584:intron | 40.0% | |
| ! | AATTCTGGAAGGCCAGATAA+AGG | + | 51800:33558-33577 | None:intergenic | 40.0% |
| ! | ACTACACCTCATCCTTTTTC+CGG | - | 51800:35127-35146 | MS.gene072584:intron | 40.0% |
| ! | CTTGTAGTGGAATCACAAGT+CGG | + | 51800:36736-36755 | None:intergenic | 40.0% |
| ! | GAAAATGTACTTGGTGAAGG+TGG | - | 51800:33648-33667 | MS.gene072584:intron | 40.0% |
| ! | GAAGCATCCCTTTCAAAAAC+AGG | - | 51800:35444-35463 | MS.gene072584:intron | 40.0% |
| ! | GAATTCTCTCACTTAGGTTG+GGG | - | 51800:33573-33592 | MS.gene072584:intron | 40.0% |
| ! | GATAGTCTCAGCAAAGTGTT+AGG | - | 51800:35398-35417 | MS.gene072584:intron | 40.0% |
| ! | GATTGGCTGAAAATGATGGT+TGG | - | 51800:36053-36072 | MS.gene072584:intron | 40.0% |
| ! | GCATTGACGTTTCACAGTAA+AGG | + | 51800:36015-36034 | None:intergenic | 40.0% |
| ! | GGTTACTAGCTAAGCTTTGT+GGG | - | 51800:35576-35595 | MS.gene072584:intron | 40.0% |
| ! | TGTTTTCCTTAGCGCCTTTT+TGG | - | 51800:33783-33802 | MS.gene072584:intron | 40.0% |
| ! | TTGAAAGGTATGCAGCAAGA+AGG | + | 51800:35555-35574 | None:intergenic | 40.0% |
| ! | TTGCTATTGGAAGGAATCAC+TGG | - | 51800:34910-34929 | MS.gene072584:intron | 40.0% |
| ! | TTTTGGTCTGGCCAAATTAC+TGG | - | 51800:34655-34674 | MS.gene072584:intron | 40.0% |
| !! | CATCAACCAGAGCTTTGAAA+AGG | - | 51800:36123-36142 | MS.gene072584:CDS | 40.0% |
| !! | CTTTTCAAAGCTCTGGTTGA+TGG | + | 51800:36125-36144 | None:intergenic | 40.0% |
| !! | GGGTCATTGGTTTACTTTGA+GGG | - | 51800:33593-33612 | MS.gene072584:intron | 40.0% |
| !! | TGATGGATTTGGATTGTGTG+TGG | - | 51800:36507-36526 | MS.gene072584:intron | 40.0% |
| AAAGGCGAAGGAGCTGTTAT+AGG | + | 51800:33540-33559 | None:intergenic | 45.0% | |
| AAGGCGAAGGAGCTGTTATA+GGG | + | 51800:33539-33558 | None:intergenic | 45.0% | |
| AATCTCACTCCTGTCTGTGT+CGG | + | 51800:37055-37074 | None:intergenic | 45.0% | |
| ACTCGAGTTATGGGAACCTT+TGG | - | 51800:34701-34720 | MS.gene072584:intron | 45.0% | |
| AGCTTGAAATCTGGATCAGC+CGG | - | 51800:36630-36649 | MS.gene072584:intron | 45.0% | |
| AGGCACAGGAGAAGAAATCA+AGG | - | 51800:36994-37013 | MS.gene072584:CDS | 45.0% | |
| AGGCCAGTGTTTGCATATTC+AGG | + | 51800:34853-34872 | None:intergenic | 45.0% | |
| AGTGGTTGACCCAAACATTG+AGG | - | 51800:36094-36113 | MS.gene072584:CDS | 45.0% | |
| CAATACATGGAGAGAGATGG+GGG | - | 51800:33435-33454 | MS.gene072584:CDS | 45.0% | |
| CACAGGAGAAGAAATCAAGG+GGG | - | 51800:36997-37016 | MS.gene072584:CDS | 45.0% | |
| CATTCGCAATCAGGTGAAGA+AGG | - | 51800:33468-33487 | MS.gene072584:CDS | 45.0% | |
| CTCGAGTTATGGGAACCTTT+GGG | - | 51800:34702-34721 | MS.gene072584:intron | 45.0% | |
| GAAAAGACCTAAGATGAGCC+AGG | - | 51800:36187-36206 | MS.gene072584:intron | 45.0% | |
| GATGGCTTCACCTCAATGTT+TGG | + | 51800:36107-36126 | None:intergenic | 45.0% | |
| GCACAGGAGAAGAAATCAAG+GGG | - | 51800:36996-37015 | MS.gene072584:CDS | 45.0% | |
| GCTCCTGAATATGCAAACAC+TGG | - | 51800:34847-34866 | MS.gene072584:intron | 45.0% | |
| GCTGATCCAGATTTCAAGCT+CGG | + | 51800:36630-36649 | None:intergenic | 45.0% | |
| GGCACAGGAGAAGAAATCAA+GGG | - | 51800:36995-37014 | MS.gene072584:CDS | 45.0% | |
| GGTTGATTGTGTGCAGTCAT+AGG | - | 51800:36677-36696 | MS.gene072584:intron | 45.0% | |
| GTTGGCCGCTAATATATGCA+TGG | - | 51800:36437-36456 | MS.gene072584:CDS | 45.0% | |
| TAACGGCACACATGACTCAA+AGG | - | 51800:37108-37127 | MS.gene072584:CDS | 45.0% | |
| TAGGGGCAGCTAAAAACACA+CGG | + | 51800:35512-35531 | None:intergenic | 45.0% | |
| TCACCATGGCTATCTTACGT+GGG | - | 51800:34425-34444 | MS.gene072584:CDS | 45.0% | |
| TCAGGTGAAGAAGGTAGTTC+AGG | - | 51800:33477-33496 | MS.gene072584:CDS | 45.0% | |
| TCCAGTTGATTATGGTCGTC+CGG | - | 51800:34939-34958 | MS.gene072584:intron | 45.0% | |
| TGCAACAAGCCACACTAACT+TGG | + | 51800:36325-36344 | None:intergenic | 45.0% | |
| TGCACACAATCAACCACATC+AGG | + | 51800:36672-36691 | None:intergenic | 45.0% | |
| TGTGTCGGAAAATTCCCTCT+GGG | + | 51800:37040-37059 | None:intergenic | 45.0% | |
| ! | ATATCTCGGTGTACCACCTT+TGG | + | 51800:34584-34603 | None:intergenic | 45.0% |
| ! | GCACCGGCAATTATTATCAG+AGG | - | 51800:35876-35895 | MS.gene072584:CDS | 45.0% |
| ! | GTACTTGGTGAAGGTGGTTA+TGG | - | 51800:33654-33673 | MS.gene072584:intron | 45.0% |
| !! | AGTTCTAGAGAAGAGAGCAG+AGG | - | 51800:37078-37097 | MS.gene072584:CDS | 45.0% |
| !! | GGGGTCATTGGTTTACTTTG+AGG | - | 51800:33592-33611 | MS.gene072584:intron | 45.0% |
| !! | GTCAATCCAAAAAGGCGCTA+AGG | + | 51800:33792-33811 | None:intergenic | 45.0% |
| !! | GTTCTAGAGAAGAGAGCAGA+GGG | - | 51800:37079-37098 | MS.gene072584:CDS | 45.0% |
| !! | TTGTTAATAATAAATATTAA+TGG | + | 51800:35930-35949 | None:intergenic | 5.0% |
| ACAGCTCCTTCGCCTTTATC+TGG | - | 51800:33543-33562 | MS.gene072584:CDS | 50.0% | |
| ACTCCAGCATACGTACAACC+TGG | + | 51800:36208-36227 | None:intergenic | 50.0% | |
| CGAAGCAATTGAGCCAAAGG+TGG | - | 51800:34568-34587 | MS.gene072584:intron | 50.0% | |
| CGTACAACCTGGCTCATCTT+AGG | + | 51800:36197-36216 | None:intergenic | 50.0% | |
| CTGTGTCGGAAAATTCCCTC+TGG | + | 51800:37041-37060 | None:intergenic | 50.0% | |
| CTTCCCACGTAAGATAGCCA+TGG | + | 51800:34431-34450 | None:intergenic | 50.0% | |
| CTTCCCAGCACCCAGTAATT+TGG | + | 51800:34669-34688 | None:intergenic | 50.0% | |
| GAATCACAAGTCGGACAGCT+TGG | + | 51800:36727-36746 | None:intergenic | 50.0% | |
| GAGAAGAGAGCAGAGGGTAA+CGG | - | 51800:37085-37104 | MS.gene072584:CDS | 50.0% | |
| GCACGAAGCAATTGAGCCAA+AGG | - | 51800:34565-34584 | MS.gene072584:intron | 50.0% | |
| GCACGCATCAAGATTCTCCT+AGG | - | 51800:34450-34469 | MS.gene072584:CDS | 50.0% | |
| GGAATACCCTTTAGCACGAG+AGG | - | 51800:36232-36251 | MS.gene072584:intron | 50.0% | |
| GGTTGTACGTATGCTGGAGT+CGG | - | 51800:36208-36227 | MS.gene072584:intron | 50.0% | |
| GTCACCATGGCTATCTTACG+TGG | - | 51800:34424-34443 | MS.gene072584:CDS | 50.0% | |
| TATGAACTCTGGCCTAGCAC+CGG | - | 51800:35860-35879 | MS.gene072584:CDS | 50.0% | |
| TCTTGCTCTACCCTTGAGAG+TGG | - | 51800:34734-34753 | MS.gene072584:intron | 50.0% | |
| TGGCCAAATTACTGGGTGCT+GGG | - | 51800:34663-34682 | MS.gene072584:intron | 50.0% | |
| ! | AAGATAGCCATGGTGACGCA+TGG | + | 51800:34421-34440 | None:intergenic | 50.0% |
| ! | AGAGCAGAGGGTAACGGTAA+CGG | - | 51800:37091-37110 | MS.gene072584:CDS | 50.0% |
| ! | AGTTGGATCACCTGACTTGC+TGG | + | 51800:36819-36838 | None:intergenic | 50.0% |
| ! | ATGTTCAGGATCGAAGGCAC+AGG | - | 51800:36980-36999 | MS.gene072584:CDS | 50.0% |
| ! | GAGAGCCCTTTTCAAAGCTC+TGG | + | 51800:36132-36151 | None:intergenic | 50.0% |
| ! | GGGAATTTTCCGACACAGAC+AGG | - | 51800:37043-37062 | MS.gene072584:CDS | 50.0% |
| ! | TGCAGAAATCGACTCCCAGA+GGG | - | 51800:37023-37042 | MS.gene072584:CDS | 50.0% |
| !! | CTCACTTAGGTTGGGGTCAT+TGG | - | 51800:33580-33599 | MS.gene072584:intron | 50.0% |
| AGATGCAGAGGCTCACGCTT+TGG | + | 51800:34481-34500 | None:intergenic | 55.0% | |
| CAAGTCGGACAGCTTGGATC+TGG | + | 51800:36721-36740 | None:intergenic | 55.0% | |
| CGGCACACATGACTCAAAGG+CGG | - | 51800:37111-37130 | MS.gene072584:CDS | 55.0% | |
| CTGGCCAAATTACTGGGTGC+TGG | - | 51800:34662-34681 | MS.gene072584:intron | 55.0% | |
| GAGCCAGGTTGTACGTATGC+TGG | - | 51800:36202-36221 | MS.gene072584:intron | 55.0% | |
| GCCGGACGACCATAATCAAC+TGG | + | 51800:34943-34962 | None:intergenic | 55.0% | |
| GGAAGGCCAGATAAAGGCGA+AGG | + | 51800:33552-33571 | None:intergenic | 55.0% | |
| GGAGGGTCACATTCGCAATC+AGG | - | 51800:33459-33478 | MS.gene072584:CDS | 55.0% | |
| TACATGGAGAGAGATGGGGG+TGG | - | 51800:33438-33457 | MS.gene072584:CDS | 55.0% | |
| TGTACGTATGCTGGAGTCGG+AGG | - | 51800:36211-36230 | MS.gene072584:intron | 55.0% | |
| ! | GTGCAGAAATCGACTCCCAG+AGG | - | 51800:37022-37041 | MS.gene072584:CDS | 55.0% |
| !!! | ACTTTTGGGGTTCTGCGTCG+AGG | - | 51800:34146-34165 | MS.gene072584:intron | 55.0% |
| !!! | CTTTTGGGGTTCTGCGTCGA+GGG | - | 51800:34147-34166 | MS.gene072584:intron | 55.0% |
| ATGGAGAGAGATGGGGGTGG+AGG | - | 51800:33441-33460 | MS.gene072584:CDS | 60.0% | |
| CATGGAGCCATGCGTCACCA+TGG | - | 51800:34411-34430 | MS.gene072584:CDS | 60.0% | |
| CTCACGCTTTGGCTGTGCCT+AGG | + | 51800:34470-34489 | None:intergenic | 60.0% | |
| TCTGCGTCGAGGGAACTCAC+AGG | - | 51800:34157-34176 | MS.gene072584:intron | 60.0% | |
| TGGAGAGAGATGGGGGTGGA+GGG | - | 51800:33442-33461 | MS.gene072584:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51800 | gene | 33385 | 37171 | 33385 | ID=MS.gene072584 |
| 51800 | mRNA | 33385 | 37171 | 33385 | ID=MS.gene072584.t1;Parent=MS.gene072584 |
| 51800 | exon | 36814 | 37171 | 36814 | ID=MS.gene072584.t1.exon1;Parent=MS.gene072584.t1 |
| 51800 | CDS | 36814 | 37171 | 36814 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 36378 | 36482 | 36378 | ID=MS.gene072584.t1.exon2;Parent=MS.gene072584.t1 |
| 51800 | CDS | 36378 | 36482 | 36378 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 36072 | 36194 | 36072 | ID=MS.gene072584.t1.exon3;Parent=MS.gene072584.t1 |
| 51800 | CDS | 36072 | 36194 | 36072 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 35833 | 36003 | 35833 | ID=MS.gene072584.t1.exon4;Parent=MS.gene072584.t1 |
| 51800 | CDS | 35833 | 36003 | 35833 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 35587 | 35716 | 35587 | ID=MS.gene072584.t1.exon5;Parent=MS.gene072584.t1 |
| 51800 | CDS | 35587 | 35716 | 35587 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 34303 | 34515 | 34303 | ID=MS.gene072584.t1.exon6;Parent=MS.gene072584.t1 |
| 51800 | CDS | 34303 | 34515 | 34303 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 33729 | 33736 | 33729 | ID=MS.gene072584.t1.exon7;Parent=MS.gene072584.t1 |
| 51800 | CDS | 33729 | 33736 | 33729 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| 51800 | exon | 33385 | 33568 | 33385 | ID=MS.gene072584.t1.exon8;Parent=MS.gene072584.t1 |
| 51800 | CDS | 33385 | 33568 | 33385 | ID=cds.MS.gene072584.t1;Parent=MS.gene072584.t1 |
| Gene Sequence |
| Protein sequence |
