Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22411.t1 | XP_003625673.1 | 89.9 | 565 | 36 | 6 | 1 | 552 | 1 | 557 | 1.10E-273 | 952.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22411.t1 | Q9LD95 | 50.4 | 558 | 246 | 7 | 2 | 552 | 14 | 547 | 2.1e-137 | 490.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22411.t1 | G7L3V2 | 89.9 | 565 | 36 | 6 | 1 | 552 | 1 | 557 | 7.6e-274 | 952.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene22411 | 0.824636 | 7.25E-54 | -1.69E-46 |
| MS.gene049257 | MS.gene22411 | 0.823769 | 1.16E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene22411 | 0.805193 | 1.50E-49 | -1.69E-46 |
| MS.gene050315 | MS.gene22411 | 0.80181 | 7.55E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene22411 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene22411 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene22411 | 0.859509 | 3.94E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene22411 | 0.818836 | 1.59E-52 | -1.69E-46 |
| MS.gene051171 | MS.gene22411 | 0.856261 | 3.63E-62 | -1.69E-46 |
| MS.gene051208 | MS.gene22411 | 0.82128 | 4.39E-53 | -1.69E-46 |
| MS.gene051242 | MS.gene22411 | 0.838124 | 3.46E-57 | -1.69E-46 |
| MS.gene051244 | MS.gene22411 | 0.856289 | 3.56E-62 | -1.69E-46 |
| MS.gene051525 | MS.gene22411 | 0.847527 | 1.09E-59 | -1.69E-46 |
| MS.gene051552 | MS.gene22411 | -0.812782 | 3.56E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene22411 | 0.853875 | 1.79E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene22411 | -0.806282 | 8.87E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene22411 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene22411 | 0.808605 | 2.85E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene22411 | 0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene22411 | 0.809 | 2.35E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene22411 | 0.802355 | 5.84E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene22411 | 0.810152 | 1.33E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene22411 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene053107 | MS.gene22411 | 0.805152 | 1.53E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene22411 | 0.886635 | 2.88E-72 | -1.69E-46 |
| MS.gene053579 | MS.gene22411 | 0.809585 | 1.76E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene22411 | 0.815742 | 7.91E-52 | -1.69E-46 |
| MS.gene054102 | MS.gene22411 | 0.823859 | 1.10E-53 | -1.69E-46 |
| MS.gene054107 | MS.gene22411 | 0.815793 | 7.71E-52 | -1.69E-46 |
| MS.gene054110 | MS.gene22411 | 0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene22411 | 0.854869 | 9.23E-62 | -1.69E-46 |
| MS.gene054884 | MS.gene22411 | -0.824194 | 9.21E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene22411 | 0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene055370 | MS.gene22411 | 0.87838 | 2.94E-69 | -1.69E-46 |
| MS.gene055412 | MS.gene22411 | 0.8116 | 6.45E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene22411 | 0.839426 | 1.60E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene22411 | 0.853409 | 2.44E-61 | -1.69E-46 |
| MS.gene05556 | MS.gene22411 | 0.805777 | 1.13E-49 | -1.69E-46 |
| MS.gene055605 | MS.gene22411 | 0.832144 | 1.12E-55 | -1.69E-46 |
| MS.gene055971 | MS.gene22411 | 0.818869 | 1.57E-52 | -1.69E-46 |
| MS.gene056351 | MS.gene22411 | 0.813655 | 2.29E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene22411 | 0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene056451 | MS.gene22411 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene056633 | MS.gene22411 | 0.853228 | 2.74E-61 | -1.69E-46 |
| MS.gene056664 | MS.gene22411 | 0.877816 | 4.64E-69 | -1.69E-46 |
| MS.gene056796 | MS.gene22411 | 0.802646 | 5.08E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene22411 | 0.81272 | 3.68E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene22411 | 0.806361 | 8.54E-50 | -1.69E-46 |
| MS.gene057196 | MS.gene22411 | 0.8442 | 8.76E-59 | -1.69E-46 |
| MS.gene057332 | MS.gene22411 | 0.823498 | 1.34E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene22411 | 0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene22411 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene22411 | 0.8048 | 1.82E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene22411 | 0.843708 | 1.19E-58 | -1.69E-46 |
| MS.gene058276 | MS.gene22411 | 0.869306 | 3.42E-66 | -1.69E-46 |
| MS.gene058444 | MS.gene22411 | 0.83164 | 1.49E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene22411 | 0.80457 | 2.03E-49 | -1.69E-46 |
| MS.gene058746 | MS.gene22411 | 0.858728 | 6.75E-63 | -1.69E-46 |
| MS.gene059141 | MS.gene22411 | 0.839639 | 1.41E-57 | -1.69E-46 |
| MS.gene05914 | MS.gene22411 | 0.809114 | 2.22E-50 | -1.69E-46 |
| MS.gene059512 | MS.gene22411 | 0.822762 | 1.99E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene22411 | 0.860051 | 2.70E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene22411 | 0.800259 | 1.57E-48 | -1.69E-46 |
| MS.gene061231 | MS.gene22411 | 0.836502 | 9.01E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22411.t1 | MTR_7g101840 | 92.389 | 565 | 22 | 6 | 1 | 552 | 1 | 557 | 0.0 | 1024 |
| MS.gene22411.t1 | MTR_1g063850 | 55.929 | 565 | 226 | 6 | 1 | 552 | 7 | 561 | 0.0 | 615 |
| MS.gene22411.t1 | MTR_3g118290 | 36.340 | 388 | 238 | 3 | 164 | 547 | 187 | 569 | 1.08e-71 | 240 |
| MS.gene22411.t1 | MTR_3g033420 | 39.496 | 238 | 144 | 0 | 311 | 548 | 165 | 402 | 5.83e-51 | 180 |
| MS.gene22411.t1 | MTR_1g007370 | 30.065 | 306 | 207 | 2 | 246 | 550 | 250 | 549 | 2.45e-42 | 159 |
| MS.gene22411.t1 | MTR_0172s0030 | 32.119 | 302 | 197 | 5 | 251 | 546 | 200 | 499 | 2.17e-36 | 142 |
| MS.gene22411.t1 | MTR_3g090900 | 30.693 | 303 | 199 | 5 | 252 | 548 | 216 | 513 | 6.53e-30 | 123 |
| MS.gene22411.t1 | MTR_3g090900 | 31.633 | 196 | 130 | 3 | 252 | 444 | 216 | 410 | 1.02e-20 | 95.5 |
| MS.gene22411.t1 | MTR_3g033150 | 33.333 | 153 | 102 | 0 | 396 | 548 | 1 | 153 | 4.43e-20 | 87.4 |
| MS.gene22411.t1 | MTR_1g007370 | 29.371 | 143 | 101 | 0 | 248 | 390 | 252 | 394 | 6.00e-19 | 89.7 |
| MS.gene22411.t1 | MTR_3g090900 | 35.294 | 136 | 85 | 2 | 252 | 384 | 216 | 351 | 1.70e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22411.t1 | AT2G36990 | 51.107 | 542 | 234 | 7 | 18 | 552 | 30 | 547 | 2.28e-177 | 511 |
| MS.gene22411.t1 | AT1G08540 | 38.398 | 362 | 218 | 1 | 187 | 548 | 212 | 568 | 4.48e-79 | 259 |
| MS.gene22411.t1 | AT5G13730 | 35.135 | 296 | 189 | 1 | 252 | 547 | 122 | 414 | 1.50e-46 | 169 |
| MS.gene22411.t1 | AT3G53920 | 30.034 | 293 | 204 | 1 | 258 | 549 | 278 | 570 | 1.87e-42 | 160 |
| MS.gene22411.t1 | AT1G64860 | 30.392 | 306 | 205 | 5 | 249 | 548 | 196 | 499 | 3.52e-33 | 133 |
| MS.gene22411.t1 | AT5G24120 | 29.552 | 335 | 223 | 5 | 221 | 548 | 188 | 516 | 1.06e-32 | 132 |
| MS.gene22411.t1 | AT5G24120 | 29.552 | 335 | 223 | 5 | 221 | 548 | 188 | 516 | 1.06e-32 | 132 |
| MS.gene22411.t1 | AT5G24120 | 29.552 | 335 | 223 | 5 | 221 | 548 | 188 | 516 | 1.06e-32 | 132 |
| MS.gene22411.t1 | AT1G64860 | 29.259 | 270 | 184 | 4 | 240 | 503 | 187 | 455 | 2.40e-27 | 115 |
| MS.gene22411.t1 | AT3G53920 | 26.866 | 134 | 98 | 0 | 257 | 390 | 277 | 410 | 2.12e-17 | 85.1 |
Find 120 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAAAGTTGCTTTGTTTC+AGG | 0.090588 | 7.3:+11585907 | None:intergenic |
| GGGTGATTTGTCTTCTTTAC+AGG | 0.153277 | 7.3:+11586742 | None:intergenic |
| CTGTTCCTGCAGCTTCTTCT+TGG | 0.172620 | 7.3:-11586847 | MS.gene22411:CDS |
| ATCAAACTTCAGTCTCATTT+TGG | 0.184227 | 7.3:-11585733 | MS.gene22411:CDS |
| GAGAAATCTTTGTCAGAAAT+TGG | 0.213726 | 7.3:-11582769 | MS.gene22411:CDS |
| CTGAGTACCTTCCTTTCTTT+TGG | 0.217852 | 7.3:+11582820 | None:intergenic |
| TCGCTTTGCTATTTCTTCTT+TGG | 0.231759 | 7.3:+11584625 | None:intergenic |
| AGAATTCTTCCTTCCCCTTC+AGG | 0.247343 | 7.3:-11587045 | MS.gene22411:intron |
| ATGCTCTGCGCTTGTTCTTA+TGG | 0.275437 | 7.3:-11585933 | MS.gene22411:CDS |
| TCAATTGATTGCTCAAATTC+AGG | 0.275870 | 7.3:-11585869 | MS.gene22411:intron |
| GGTTCAGTACTTACGCTTAC+TGG | 0.283353 | 7.3:-11585257 | MS.gene22411:CDS |
| GGAGAATTTCTATGCCCTTT+TGG | 0.304880 | 7.3:-11584702 | MS.gene22411:CDS |
| CTGCCTTCAGGACTTATTGC+AGG | 0.346270 | 7.3:-11585551 | MS.gene22411:intron |
| AATATCATAGGAGGGAAGTA+TGG | 0.346762 | 7.3:-11585325 | MS.gene22411:intron |
| GGGGCGTGGTCTCTGCCTTC+AGG | 0.350007 | 7.3:-11585563 | MS.gene22411:CDS |
| TACCGGCAGACGAATTGTTT+TGG | 0.351152 | 7.3:+11585194 | None:intergenic |
| ACATTAAACACGAGGGTAAC+AGG | 0.352590 | 7.3:-11586618 | MS.gene22411:CDS |
| GGGGAAGGAAGAATTCTAGA+AGG | 0.369676 | 7.3:+11587051 | None:intergenic |
| ACTGAACCGGCAACCAGCTT+GGG | 0.373184 | 7.3:+11585272 | None:intergenic |
| GGTGGATAAGGCAAACAATA+AGG | 0.378088 | 7.3:-11585236 | MS.gene22411:CDS |
| CTTCCGCAATCTTGCCCAAA+AGG | 0.380574 | 7.3:+11584687 | None:intergenic |
| TCAAACCCCAAGCTGGTTGC+CGG | 0.391074 | 7.3:-11585278 | MS.gene22411:CDS |
| GGAACCAACTTTGGCTGAAT+GGG | 0.405490 | 7.3:-11585707 | MS.gene22411:CDS |
| CTTTGCTATTTCTTCTTTGG+TGG | 0.415934 | 7.3:+11584628 | None:intergenic |
| AGTGGCTGAAGAGTTGAAAT+TGG | 0.417620 | 7.3:-11586276 | MS.gene22411:CDS |
| GCCTGCTGATGGTTTCCAAT+GGG | 0.420481 | 7.3:-11586351 | MS.gene22411:CDS |
| AGGAATTACAGTAGATAGGT+TGG | 0.431039 | 7.3:-11584600 | MS.gene22411:CDS |
| GGCTGAATGGGCAGATGGTG+TGG | 0.432577 | 7.3:-11585695 | MS.gene22411:CDS |
| TACTGAACCGGCAACCAGCT+TGG | 0.433442 | 7.3:+11585271 | None:intergenic |
| CAAGGTGTTGGGTGTGTGTA+AGG | 0.434469 | 7.3:-11582746 | MS.gene22411:CDS |
| GGGAACCAACTTTGGCTGAA+TGG | 0.437966 | 7.3:-11585708 | MS.gene22411:CDS |
| GATGATGATTCACTACCTCT+TGG | 0.440294 | 7.3:-11586233 | MS.gene22411:CDS |
| GTATGCAGCAGTTGCATCTT+CGG | 0.440704 | 7.3:-11586536 | MS.gene22411:CDS |
| AAGAGCATCGCGATGAGTAT+AGG | 0.444608 | 7.3:-11586778 | MS.gene22411:CDS |
| CTAAGATTTGGTATTGAAGA+TGG | 0.445284 | 7.3:-11582796 | MS.gene22411:CDS |
| TAAGGAGAGGGTCAGACAAT+TGG | 0.454557 | 7.3:-11582728 | MS.gene22411:CDS |
| AAGGTACTCAGGCTAAGATT+TGG | 0.454745 | 7.3:-11582808 | MS.gene22411:CDS |
| GAAGAAACGAAATCCTCTTC+CGG | 0.460270 | 7.3:+11586392 | None:intergenic |
| TTTGCTATTTCTTCTTTGGT+GGG | 0.461967 | 7.3:+11584629 | None:intergenic |
| TACCTAGGAGGTTGCGTACA+TGG | 0.462181 | 7.3:+11582851 | None:intergenic |
| TTTCGATGGAGCGAGCTGTA+TGG | 0.462748 | 7.3:-11584547 | MS.gene22411:CDS |
| AGACTCGGACACAACTTTCC+AGG | 0.467003 | 7.3:-11584522 | MS.gene22411:intron |
| ATTGGCTTCTTCGCCGGAAG+AGG | 0.467488 | 7.3:-11586405 | MS.gene22411:CDS |
| TCAGAAATTGGCAAGGTGTT+GGG | 0.477054 | 7.3:-11582757 | MS.gene22411:CDS |
| TCAACTATGCTGCCTGCTGA+TGG | 0.478314 | 7.3:-11586362 | MS.gene22411:CDS |
| ATGATGATTCACTACCTCTT+GGG | 0.478340 | 7.3:-11586232 | MS.gene22411:intron |
| TTCCAAAACAATTCGTCTGC+CGG | 0.487773 | 7.3:-11585196 | MS.gene22411:intron |
| GTCAGAAATTGGCAAGGTGT+TGG | 0.493182 | 7.3:-11582758 | MS.gene22411:CDS |
| TTCGATGGAGCGAGCTGTAT+GGG | 0.496745 | 7.3:-11584546 | MS.gene22411:CDS |
| CTTCAGATTGGCTTCTTCGC+CGG | 0.497531 | 7.3:-11586411 | MS.gene22411:intron |
| AGACTGGCCGACTCTTCACT+TGG | 0.501392 | 7.3:-11586123 | MS.gene22411:CDS |
| GCTGAATGGGCAGATGGTGT+GGG | 0.502616 | 7.3:-11585694 | MS.gene22411:CDS |
| AGTAAGCGTAAGTACTGAAC+CGG | 0.503207 | 7.3:+11585259 | None:intergenic |
| TTCCGCAATCTTGCCCAAAA+GGG | 0.503563 | 7.3:+11584688 | None:intergenic |
| GAGTAGGAATTACAGTAGAT+AGG | 0.505400 | 7.3:-11584604 | MS.gene22411:CDS |
| CTTACGCTTACTGGTGGATA+AGG | 0.505548 | 7.3:-11585248 | MS.gene22411:CDS |
| TACAAGAACTCCGCTTTCGA+TGG | 0.512841 | 7.3:-11584561 | MS.gene22411:CDS |
| CTCAAAACAAGCTGCTGCAG+TGG | 0.518614 | 7.3:-11586294 | MS.gene22411:CDS |
| TGCCTGCTGATGGTTTCCAA+TGG | 0.519704 | 7.3:-11586352 | MS.gene22411:CDS |
| ACAAAATCGTGAGGTCAATA+CGG | 0.521532 | 7.3:-11586095 | MS.gene22411:CDS |
| TCTGCCCATTCAGCCAAAGT+TGG | 0.529812 | 7.3:+11585703 | None:intergenic |
| AGGGAAGTATGGGCCTTATG+AGG | 0.530509 | 7.3:-11585314 | MS.gene22411:CDS |
| GCGAGCTGTATGGGCAGACT+CGG | 0.531907 | 7.3:-11584537 | MS.gene22411:CDS |
| AAGTTGAAAGAAGGACTTGA+CGG | 0.532097 | 7.3:-11585961 | MS.gene22411:CDS |
| TCACATTGCTAAATATTACC+AGG | 0.536733 | 7.3:-11585584 | MS.gene22411:CDS |
| TCCCATTGGAAACCATCAGC+AGG | 0.540739 | 7.3:+11586350 | None:intergenic |
| GTGAACTACCAGGCGTAAGT+TGG | 0.541331 | 7.3:+11585603 | None:intergenic |
| GAAGGCAGAGACCACGCCCC+TGG | 0.545314 | 7.3:+11585566 | None:intergenic |
| ATTTGTGAGAAAATCAATAC+CGG | 0.546496 | 7.3:-11586585 | MS.gene22411:CDS |
| CAAGAGTAAGTGCATCCCAT+TGG | 0.548221 | 7.3:+11586336 | None:intergenic |
| GGTCAATACGGCTTAAAGAA+AGG | 0.550085 | 7.3:-11586083 | MS.gene22411:CDS |
| GGGAAGGAAGAATTCTAGAA+GGG | 0.551200 | 7.3:+11587052 | None:intergenic |
| CAAAAGAAAGGAAGGTACTC+AGG | 0.556105 | 7.3:-11582819 | MS.gene22411:CDS |
| GTAGGCCAAGAAGAAGCTGC+AGG | 0.556382 | 7.3:+11586842 | None:intergenic |
| GTTCTTTCCAAGTGAAGAGT+CGG | 0.560295 | 7.3:+11586116 | None:intergenic |
| ATATCATAGGAGGGAAGTAT+GGG | 0.564621 | 7.3:-11585324 | MS.gene22411:intron |
| TTTGCCTCCAAAAGAAAGGA+AGG | 0.566764 | 7.3:-11582827 | MS.gene22411:CDS |
| GATTCATGCCAACTTACGCC+TGG | 0.569755 | 7.3:-11585611 | MS.gene22411:CDS |
| CACAATGAAGTCGTTTCTGA+AGG | 0.570570 | 7.3:+11585656 | None:intergenic |
| GAAAAGTTCAAACCCCAAGC+TGG | 0.571259 | 7.3:-11585285 | MS.gene22411:CDS |
| GCAGGAACAGCTTGGTCATG+AGG | 0.572256 | 7.3:+11586860 | None:intergenic |
| GCTAAATATTACCAGGGGCG+TGG | 0.578026 | 7.3:-11585577 | MS.gene22411:CDS |
| GAAGAAATAGCAAAGCGAGT+AGG | 0.578606 | 7.3:-11584620 | MS.gene22411:CDS |
| AAGAAGCTGCAGGAACAGCT+TGG | 0.580401 | 7.3:+11586852 | None:intergenic |
| AGCCATGTACGCAACCTCCT+AGG | 0.580915 | 7.3:-11582853 | MS.gene22411:CDS |
| AAAAGTCCGATGTACAAAGA+AGG | 0.581605 | 7.3:-11585999 | MS.gene22411:CDS |
| TTGCTATTTCTTCTTTGGTG+GGG | 0.584906 | 7.3:+11584630 | None:intergenic |
| GTTGGGTGTGTGTAAGGAGA+GGG | 0.590883 | 7.3:-11582740 | MS.gene22411:CDS |
| CACATTGCTAAATATTACCA+GGG | 0.594851 | 7.3:-11585583 | MS.gene22411:CDS |
| TAGGAATACGGGTACCTGAA+GGG | 0.595294 | 7.3:+11587031 | None:intergenic |
| CATCAAGTTGTTGACTAACA+AGG | 0.596849 | 7.3:+11582674 | None:intergenic |
| AGGAATACGGGTACCTGAAG+GGG | 0.597970 | 7.3:+11587032 | None:intergenic |
| TCTTGTAAAAGAACAGAGGT+AGG | 0.599319 | 7.3:+11586797 | None:intergenic |
| TCTTTACAGGTATGAAGTAG+CGG | 0.600256 | 7.3:+11586755 | None:intergenic |
| ATCTTTGTCAGAAATTGGCA+AGG | 0.600345 | 7.3:-11582764 | MS.gene22411:CDS |
| GGAAGAATTCTAGAAGGGAA+TGG | 0.601143 | 7.3:+11587057 | None:intergenic |
| ACGTAACCTTCTTTGTACAT+CGG | 0.606013 | 7.3:+11585993 | None:intergenic |
| CTAGAAGGGAATGGTGTAGA+CGG | 0.606997 | 7.3:+11587066 | None:intergenic |
| TCTGAAGGTCACGACAGCTA+AGG | 0.610151 | 7.3:+11585671 | None:intergenic |
| GTGTTGCAAAACAACTAATG+AGG | 0.615119 | 7.3:-11582876 | MS.gene22411:CDS |
| CGTCAACTCATCAACATCGC+CGG | 0.618555 | 7.3:+11586566 | None:intergenic |
| CTGAACCGGCAACCAGCTTG+GGG | 0.623406 | 7.3:+11585273 | None:intergenic |
| ATACCTGCAATAAGTCCTGA+AGG | 0.625468 | 7.3:+11585548 | None:intergenic |
| ATACGGGTACCTGAAGGGGA+AGG | 0.626180 | 7.3:+11587036 | None:intergenic |
| ACAGCTCGCTCCATCGAAAG+CGG | 0.630654 | 7.3:+11584551 | None:intergenic |
| ATTTAGCAATGTGAACTACC+AGG | 0.636377 | 7.3:+11585593 | None:intergenic |
| CTTCAGAAACGACTTCATTG+TGG | 0.636469 | 7.3:-11585655 | MS.gene22411:CDS |
| TAAAGAAGACAAATCACCCC+AGG | 0.636708 | 7.3:-11586738 | MS.gene22411:intron |
| TCAGTACTTACGCTTACTGG+TGG | 0.637515 | 7.3:-11585254 | MS.gene22411:CDS |
| TGTTGGGTGTGTGTAAGGAG+AGG | 0.638170 | 7.3:-11582741 | MS.gene22411:CDS |
| TTGGAGGCAAAATACCTAGG+AGG | 0.638755 | 7.3:+11582839 | None:intergenic |
| GGATAAGGCAAACAATAAGG+AGG | 0.639166 | 7.3:-11585233 | MS.gene22411:CDS |
| ACTTTGGCTGAATGGGCAGA+TGG | 0.654006 | 7.3:-11585700 | MS.gene22411:CDS |
| GATAAGGCAAACAATAAGGA+GGG | 0.667443 | 7.3:-11585232 | MS.gene22411:CDS |
| TAAGCTAGAACTAACCCAAG+AGG | 0.669306 | 7.3:+11586218 | None:intergenic |
| TGAAGGCAACATTAAACACG+AGG | 0.685715 | 7.3:-11586626 | MS.gene22411:intron |
| TTGGAAAGAACAAAATCGTG+AGG | 0.689756 | 7.3:-11586104 | MS.gene22411:CDS |
| ACATTGCTAAATATTACCAG+GGG | 0.701498 | 7.3:-11585582 | MS.gene22411:CDS |
| ATGCTCTTGTAAAAGAACAG+AGG | 0.718644 | 7.3:+11586793 | None:intergenic |
| GAAGGCAACATTAAACACGA+GGG | 0.746893 | 7.3:-11586625 | MS.gene22411:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATGTATATATATATATA+TGG | + | chr7.3:11585790-11585809 | None:intergenic | 10.0% |
| !! | TACATGTATTAAATAAAATA+AGG | + | chr7.3:11586568-11586587 | None:intergenic | 10.0% |
| !! | TATATATATATACATTGTAT+AGG | - | chr7.3:11585792-11585811 | MS.gene22411:intron | 10.0% |
| !! | AATATGAATAGATAGAATAA+TGG | - | chr7.3:11586347-11586366 | MS.gene22411:CDS | 15.0% |
| !! | ACATACTTAAATATATGATT+TGG | + | chr7.3:11585756-11585775 | None:intergenic | 15.0% |
| !! | ATCTATTAAAGAAACAAATT+TGG | + | chr7.3:11583280-11583299 | None:intergenic | 15.0% |
| !!! | TCTATATTTTATTTTACTGA+AGG | - | chr7.3:11583083-11583102 | MS.gene22411:intron | 15.0% |
| !!! | TTATTGATAACAAAAGAAAT+AGG | + | chr7.3:11582717-11582736 | None:intergenic | 15.0% |
| !! | AAAAAATCGTACATTAAAGA+AGG | - | chr7.3:11585064-11585083 | MS.gene22411:intron | 20.0% |
| !! | AAAATTGATATTTACGTTGA+AGG | + | chr7.3:11585235-11585254 | None:intergenic | 20.0% |
| !! | ACATGTAAGTAAACTATATT+AGG | - | chr7.3:11586581-11586600 | MS.gene22411:CDS | 20.0% |
| !! | CAAAACATTTCAATGAAATA+TGG | + | chr7.3:11583897-11583916 | None:intergenic | 20.0% |
| !! | CAAAATCTTATTATAATTGC+AGG | - | chr7.3:11586788-11586807 | MS.gene22411:CDS | 20.0% |
| !! | TAACAAAAGAAATAGGAATA+CGG | + | chr7.3:11582710-11582729 | None:intergenic | 20.0% |
| !! | TGATAACTGTTTAAACATAT+TGG | - | chr7.3:11585411-11585430 | MS.gene22411:intron | 20.0% |
| !!! | ACCATTAAAAAAGAAACTTT+TGG | + | chr7.3:11585548-11585567 | None:intergenic | 20.0% |
| !!! | ATTCTTTTGGTTTAGTATTT+TGG | - | chr7.3:11585719-11585738 | MS.gene22411:CDS | 20.0% |
| !!! | ATTTCATTGAAATGTTTTGT+AGG | - | chr7.3:11583898-11583917 | MS.gene22411:intron | 20.0% |
| !!! | CTGCAATTATAATAAGATTT+TGG | + | chr7.3:11586790-11586809 | None:intergenic | 20.0% |
| !!! | TAATAAGATTTTGGTCAATT+TGG | + | chr7.3:11586781-11586800 | None:intergenic | 20.0% |
| !!! | TGTAATGGTAGTTATTTTAT+TGG | + | chr7.3:11584923-11584942 | None:intergenic | 20.0% |
| !!! | TTCTTTTGGTTTAGTATTTT+GGG | - | chr7.3:11585720-11585739 | MS.gene22411:CDS | 20.0% |
| ! | AAAACCTCAAGATAAATGTT+TGG | - | chr7.3:11584242-11584261 | MS.gene22411:intron | 25.0% |
| ! | AACAAAAGAAATAGGAATAC+GGG | + | chr7.3:11582709-11582728 | None:intergenic | 25.0% |
| ! | AACATACTACCATAAACATA+AGG | - | chr7.3:11585626-11585645 | MS.gene22411:CDS | 25.0% |
| ! | ACATACTACCATAAACATAA+GGG | - | chr7.3:11585627-11585646 | MS.gene22411:CDS | 25.0% |
| ! | AGTAATAAAAAGCCAAATCA+AGG | + | chr7.3:11583551-11583570 | None:intergenic | 25.0% |
| ! | AGTTTATATTAGATAAGCCT+GGG | - | chr7.3:11585597-11585616 | MS.gene22411:CDS | 25.0% |
| ! | ATTATTATTGAACTTCTCTG+TGG | - | chr7.3:11586383-11586402 | MS.gene22411:CDS | 25.0% |
| ! | ATTTGTGAGAAAATCAATAC+CGG | - | chr7.3:11583141-11583160 | MS.gene22411:intron | 25.0% |
| ! | CTAGTTTGATAAAACCTTAA+GGG | - | chr7.3:11584579-11584598 | MS.gene22411:CDS | 25.0% |
| ! | GAAATAATTTAAACAGCCAT+TGG | + | chr7.3:11584212-11584231 | None:intergenic | 25.0% |
| ! | GCTTATCTAATATAAACTGT+TGG | + | chr7.3:11585595-11585614 | None:intergenic | 25.0% |
| ! | TAAACTAGTTAAACAAAACC+AGG | - | chr7.3:11585666-11585685 | MS.gene22411:CDS | 25.0% |
| ! | TGTTGCAGTAATTATCTTAA+TGG | - | chr7.3:11584336-11584355 | MS.gene22411:intron | 25.0% |
| ! | TTAGAGAAAAAGTTGAAAGA+AGG | - | chr7.3:11583756-11583775 | MS.gene22411:intron | 25.0% |
| ! | TTGAAATACTGAAAAGAGAT+AGG | - | chr7.3:11586103-11586122 | MS.gene22411:CDS | 25.0% |
| !! | AATAGATAGAATAATGGAGA+TGG | - | chr7.3:11586353-11586372 | MS.gene22411:CDS | 25.0% |
| !! | ACTAGTTTGATAAAACCTTA+AGG | - | chr7.3:11584578-11584597 | MS.gene22411:CDS | 25.0% |
| !! | ATGTTTTGTAGGTTCAATTA+AGG | - | chr7.3:11583909-11583928 | MS.gene22411:intron | 25.0% |
| !! | CTTTAACATTCATTTTCTGA+TGG | - | chr7.3:11584377-11584396 | MS.gene22411:intron | 25.0% |
| !! | TACAATTTTACAATTCCTCT+AGG | - | chr7.3:11586476-11586495 | MS.gene22411:intron | 25.0% |
| !! | TATATGTTTGTTAGTTGAAG+CGG | - | chr7.3:11584799-11584818 | MS.gene22411:intron | 25.0% |
| !! | TCTTGTAGTCAATTACATTT+TGG | + | chr7.3:11585459-11585478 | None:intergenic | 25.0% |
| !! | TTTTCTGATGGTAATATCAT+AGG | - | chr7.3:11584389-11584408 | MS.gene22411:intron | 25.0% |
| !!! | AGGTTTTATCAAACTAGTTA+AGG | + | chr7.3:11584576-11584595 | None:intergenic | 25.0% |
| !!! | ATTGATTTTCTCACAAATTG+AGG | + | chr7.3:11583139-11583158 | None:intergenic | 25.0% |
| !!! | GCCAAAAGTTTCTTTTTTAA+TGG | - | chr7.3:11585544-11585563 | MS.gene22411:intron | 25.0% |
| !!! | TATATTAGGCCTTGTTTATT+GGG | - | chr7.3:11586595-11586614 | MS.gene22411:CDS | 25.0% |
| !!! | TTTCTTTTTTAATGGTGTGA+GGG | - | chr7.3:11585552-11585571 | MS.gene22411:CDS | 25.0% |
| AAACCTACTAAATATGCATG+TGG | - | chr7.3:11585891-11585910 | MS.gene22411:CDS | 30.0% | |
| AAGAAACGTGAGAAGTAAAT+GGG | - | chr7.3:11584832-11584851 | MS.gene22411:intron | 30.0% | |
| AAGAGAGTGGATCAAATATA+GGG | - | chr7.3:11586239-11586258 | MS.gene22411:CDS | 30.0% | |
| AAGCTTGTGAAATATGATGT+TGG | - | chr7.3:11585820-11585839 | MS.gene22411:intron | 30.0% | |
| ACAAGTATTAAGTTCTGTTG+TGG | - | chr7.3:11585495-11585514 | MS.gene22411:intron | 30.0% | |
| ACATTGCTAAATATTACCAG+GGG | - | chr7.3:11584144-11584163 | MS.gene22411:intron | 30.0% | |
| AGAAAGTAAACAAACCCTTA+AGG | + | chr7.3:11584596-11584615 | None:intergenic | 30.0% | |
| AGTTAAGGAAATGAACAGAT+TGG | + | chr7.3:11584561-11584580 | None:intergenic | 30.0% | |
| ATACTTGTGCAAATTTGAGA+TGG | + | chr7.3:11585483-11585502 | None:intergenic | 30.0% | |
| CAATTGTGATAGAGAAAAGA+TGG | - | chr7.3:11584700-11584719 | MS.gene22411:CDS | 30.0% | |
| CACATTGCTAAATATTACCA+GGG | - | chr7.3:11584143-11584162 | MS.gene22411:intron | 30.0% | |
| CAGTTTATATTAGATAAGCC+TGG | - | chr7.3:11585596-11585615 | MS.gene22411:CDS | 30.0% | |
| CATAATGTGTTATATGCAAC+AGG | - | chr7.3:11583944-11583963 | MS.gene22411:intron | 30.0% | |
| CTAAAATTTACGATTCAGAC+TGG | - | chr7.3:11583587-11583606 | MS.gene22411:intron | 30.0% | |
| CTGTTGCATATAACACATTA+TGG | + | chr7.3:11583946-11583965 | None:intergenic | 30.0% | |
| CTTCAAAATGAGAAAAGCTT+AGG | + | chr7.3:11584859-11584878 | None:intergenic | 30.0% | |
| GAGAAATCTTTGTCAGAAAT+TGG | - | chr7.3:11586957-11586976 | MS.gene22411:intron | 30.0% | |
| GATAAATGTTTGGCTAAAGT+TGG | - | chr7.3:11584252-11584271 | MS.gene22411:intron | 30.0% | |
| GTATATTGTCTACTTCAGAT+TGG | - | chr7.3:11583303-11583322 | MS.gene22411:intron | 30.0% | |
| TAAGAGAGTGGATCAAATAT+AGG | - | chr7.3:11586238-11586257 | MS.gene22411:CDS | 30.0% | |
| TCAATTCTGTAATAAGAGAG+TGG | - | chr7.3:11586226-11586245 | MS.gene22411:intron | 30.0% | |
| TCAATTGATTGCTCAAATTC+AGG | - | chr7.3:11583857-11583876 | MS.gene22411:intron | 30.0% | |
| TCACATTGCTAAATATTACC+AGG | - | chr7.3:11584142-11584161 | MS.gene22411:intron | 30.0% | |
| TGTTTATGTTGGATTACCTT+GGG | + | chr7.3:11586522-11586541 | None:intergenic | 30.0% | |
| TTAATTTATGCCTGTATGTG+AGG | + | chr7.3:11586693-11586712 | None:intergenic | 30.0% | |
| TTAGCCAAACATTTATCTTG+AGG | + | chr7.3:11584249-11584268 | None:intergenic | 30.0% | |
| TTCTCCTGAAAATAATATGC+TGG | + | chr7.3:11585010-11585029 | None:intergenic | 30.0% | |
| TTGTTTATGTTGGATTACCT+TGG | + | chr7.3:11586523-11586542 | None:intergenic | 30.0% | |
| ! | ATCAAACTTCAGTCTCATTT+TGG | - | chr7.3:11583993-11584012 | MS.gene22411:intron | 30.0% |
| ! | ATTTAGTCTAGTTTAACCTG+AGG | + | chr7.3:11585863-11585882 | None:intergenic | 30.0% |
| ! | ATTTTGTTCCTTACAGAAGT+TGG | - | chr7.3:11585943-11585962 | MS.gene22411:CDS | 30.0% |
| ! | CAGTCTGAATCGTAAATTTT+AGG | + | chr7.3:11583589-11583608 | None:intergenic | 30.0% |
| ! | CTAAGATTTGGTATTGAAGA+TGG | - | chr7.3:11586930-11586949 | MS.gene22411:intron | 30.0% |
| ! | GGTTTCATTCATCATTCTTT+TGG | - | chr7.3:11585706-11585725 | MS.gene22411:CDS | 30.0% |
| ! | TCTAGCTTAATGGTTAACTT+TGG | - | chr7.3:11583522-11583541 | MS.gene22411:intron | 30.0% |
| ! | TGTCTTAATTGTTGTTGAGA+AGG | - | chr7.3:11582818-11582837 | MS.gene22411:CDS | 30.0% |
| !! | CGTTTTAAATTGCTAGGAAA+GGG | - | chr7.3:11584655-11584674 | MS.gene22411:CDS | 30.0% |
| !! | CTATATTAGGCCTTGTTTAT+TGG | - | chr7.3:11586594-11586613 | MS.gene22411:CDS | 30.0% |
| !! | TATGATGTTGGTCTTGTTTA+AGG | - | chr7.3:11585832-11585851 | MS.gene22411:intron | 30.0% |
| !! | TCGATTCTATTTCTGTAACA+TGG | - | chr7.3:11584982-11585001 | MS.gene22411:intron | 30.0% |
| !! | TCGTTTTAAATTGCTAGGAA+AGG | - | chr7.3:11584654-11584673 | MS.gene22411:CDS | 30.0% |
| !! | TGTGTTCGTTTTAAATTGCT+AGG | - | chr7.3:11584649-11584668 | MS.gene22411:CDS | 30.0% |
| !! | TTTGCTATTTCTTCTTTGGT+GGG | + | chr7.3:11585100-11585119 | None:intergenic | 30.0% |
| !!! | AATGAACAGATTGGTTTTAC+CGG | + | chr7.3:11584552-11584571 | None:intergenic | 30.0% |
| !!! | GTTTCTTTTTTAATGGTGTG+AGG | - | chr7.3:11585551-11585570 | MS.gene22411:intron | 30.0% |
| !!! | TGTTTTGGAATGCAGAAATA+AGG | + | chr7.3:11584520-11584539 | None:intergenic | 30.0% |
| AAAAGTCCGATGTACAAAGA+AGG | - | chr7.3:11583727-11583746 | MS.gene22411:intron | 35.0% | |
| AAGTTGAAAGAAGGACTTGA+CGG | - | chr7.3:11583765-11583784 | MS.gene22411:intron | 35.0% | |
| AATATCATAGGAGGGAAGTA+TGG | - | chr7.3:11584401-11584420 | MS.gene22411:intron | 35.0% | |
| ACAAAATCGTGAGGTCAATA+CGG | - | chr7.3:11583631-11583650 | MS.gene22411:intron | 35.0% | |
| ACACGTAAAAATGTGAACCT+GGG | + | chr7.3:11583008-11583027 | None:intergenic | 35.0% | |
| ACGTAACCTTCTTTGTACAT+CGG | + | chr7.3:11583736-11583755 | None:intergenic | 35.0% | |
| ACTAGTTAAACAAAACCAGG+TGG | - | chr7.3:11585669-11585688 | MS.gene22411:CDS | 35.0% | |
| AGATATATTCATGCTAGAGC+GGG | - | chr7.3:11586626-11586645 | MS.gene22411:intron | 35.0% | |
| AGCATGAATATATCTCTAGC+AGG | + | chr7.3:11586621-11586640 | None:intergenic | 35.0% | |
| AGGAATTACAGTAGATAGGT+TGG | - | chr7.3:11585126-11585145 | MS.gene22411:intron | 35.0% | |
| AGGCATGGAATTGTTGTATA+TGG | - | chr7.3:11584893-11584912 | MS.gene22411:intron | 35.0% | |
| ATCAGTGCAAGCAAAAAACT+CGG | + | chr7.3:11585395-11585414 | None:intergenic | 35.0% | |
| ATCTTTGTCAGAAATTGGCA+AGG | - | chr7.3:11586962-11586981 | MS.gene22411:intron | 35.0% | |
| ATGATGATTCACTACCTCTT+GGG | - | chr7.3:11583494-11583513 | MS.gene22411:intron | 35.0% | |
| ATGCTCTTGTAAAAGAACAG+AGG | + | chr7.3:11582936-11582955 | None:intergenic | 35.0% | |
| ATTGCAACATTAGAGAGAGT+CGG | - | chr7.3:11586133-11586152 | MS.gene22411:intron | 35.0% | |
| ATTTAGCAATGTGAACTACC+AGG | + | chr7.3:11584136-11584155 | None:intergenic | 35.0% | |
| CAAATGATCCAACTTCTGTA+AGG | + | chr7.3:11585954-11585973 | None:intergenic | 35.0% | |
| CAAGAAACGTGAGAAGTAAA+TGG | - | chr7.3:11584831-11584850 | MS.gene22411:intron | 35.0% | |
| CTGATGGTAATATCATAGGA+GGG | - | chr7.3:11584393-11584412 | MS.gene22411:intron | 35.0% | |
| GACCAAGAAAAGCTAACTAT+TGG | - | chr7.3:11586286-11586305 | MS.gene22411:CDS | 35.0% | |
| GACGAACATTTACTACGATT+CGG | + | chr7.3:11586546-11586565 | None:intergenic | 35.0% | |
| GAGATATATTCATGCTAGAG+CGG | - | chr7.3:11586625-11586644 | MS.gene22411:intron | 35.0% | |
| GAGTAGGAATTACAGTAGAT+AGG | - | chr7.3:11585122-11585141 | MS.gene22411:intron | 35.0% | |
| GATAAGGCAAACAATAAGGA+GGG | - | chr7.3:11584494-11584513 | MS.gene22411:intron | 35.0% | |
| GCTTGATACCCTTATGTTTA+TGG | + | chr7.3:11585638-11585657 | None:intergenic | 35.0% | |
| GTGTTGCAAAACAACTAATG+AGG | - | chr7.3:11586850-11586869 | MS.gene22411:CDS | 35.0% | |
| TAACTTTGGCATCCTTGATT+TGG | - | chr7.3:11583536-11583555 | MS.gene22411:intron | 35.0% | |
| TACACGTAAAAATGTGAACC+TGG | + | chr7.3:11583009-11583028 | None:intergenic | 35.0% | |
| TACTGTGCAGAAAAACTAGT+AGG | + | chr7.3:11582905-11582924 | None:intergenic | 35.0% | |
| TAGTAAGTGATATCGTTGCA+GGG | + | chr7.3:11585259-11585278 | None:intergenic | 35.0% | |
| TCTGATGGTAATATCATAGG+AGG | - | chr7.3:11584392-11584411 | MS.gene22411:intron | 35.0% | |
| TCTTGTAAAAGAACAGAGGT+AGG | + | chr7.3:11582932-11582951 | None:intergenic | 35.0% | |
| TCTTTACAGGTATGAAGTAG+CGG | + | chr7.3:11582974-11582993 | None:intergenic | 35.0% | |
| TGTGATAGAGAAAAGATGGA+AGG | - | chr7.3:11584704-11584723 | MS.gene22411:CDS | 35.0% | |
| TTAAACAAAACCAGGTGGTT+TGG | - | chr7.3:11585674-11585693 | MS.gene22411:CDS | 35.0% | |
| TTAAGTTCTGTTGTGGATGA+TGG | - | chr7.3:11585502-11585521 | MS.gene22411:intron | 35.0% | |
| TTGGAAAGAACAAAATCGTG+AGG | - | chr7.3:11583622-11583641 | MS.gene22411:intron | 35.0% | |
| ! | AACTTCAGTCTCATTTTGGA+AGG | - | chr7.3:11583997-11584016 | MS.gene22411:intron | 35.0% |
| ! | ATATCATAGGAGGGAAGTAT+GGG | - | chr7.3:11584402-11584421 | MS.gene22411:intron | 35.0% |
| ! | CATCAAGTTGTTGACTAACA+AGG | + | chr7.3:11587055-11587074 | None:intergenic | 35.0% |
| ! | GAGAATTTCTATGCCCTTTT+GGG | - | chr7.3:11585025-11585044 | MS.gene22411:intron | 35.0% |
| ! | GGTACCAGCATATTATTTTC+AGG | - | chr7.3:11585003-11585022 | MS.gene22411:intron | 35.0% |
| ! | GTATTTTGCCTCCAAAAGAA+AGG | - | chr7.3:11586895-11586914 | MS.gene22411:intron | 35.0% |
| ! | GTTTTGCAACACATACAGTT+GGG | + | chr7.3:11586842-11586861 | None:intergenic | 35.0% |
| ! | TCTTGCTATGTCTAACGATT+GGG | + | chr7.3:11586268-11586287 | None:intergenic | 35.0% |
| ! | TGTTTTGCAACACATACAGT+TGG | + | chr7.3:11586843-11586862 | None:intergenic | 35.0% |
| !! | ACTTCAGTCTCATTTTGGAA+GGG | - | chr7.3:11583998-11584017 | MS.gene22411:intron | 35.0% |
| !! | CATTGAGTTTACTTTTGTGC+TGG | + | chr7.3:11586054-11586073 | None:intergenic | 35.0% |
| !! | CTCAAAAGTTGCTTTGTTTC+AGG | + | chr7.3:11583822-11583841 | None:intergenic | 35.0% |
| !! | CTTTGCTATTTCTTCTTTGG+TGG | + | chr7.3:11585101-11585120 | None:intergenic | 35.0% |
| !! | GTACATCGGACTTTTTAGTA+AGG | + | chr7.3:11583722-11583741 | None:intergenic | 35.0% |
| !! | TACGATTCGGTTGTTTATGT+TGG | + | chr7.3:11586533-11586552 | None:intergenic | 35.0% |
| !! | TCGCTTTGCTATTTCTTCTT+TGG | + | chr7.3:11585104-11585123 | None:intergenic | 35.0% |
| !! | TTGCTATTTCTTCTTTGGTG+GGG | + | chr7.3:11585099-11585118 | None:intergenic | 35.0% |
| !! | TTGGGTTAGTTCTAGCTTAA+TGG | - | chr7.3:11583512-11583531 | MS.gene22411:intron | 35.0% |
| !!! | CATTTTGAAGTGTGGATTGT+CGG | - | chr7.3:11584869-11584888 | MS.gene22411:intron | 35.0% |
| !!! | CTCCAATAGTTAGCTTTTCT+TGG | + | chr7.3:11586291-11586310 | None:intergenic | 35.0% |
| !!! | GCTTTTCTCATTTTGAAGTG+TGG | - | chr7.3:11584861-11584880 | MS.gene22411:intron | 35.0% |
| AAAACAGGCATACCATCAAG+AGG | + | chr7.3:11586000-11586019 | None:intergenic | 40.0% | |
| AAACAGGCATACCATCAAGA+GGG | + | chr7.3:11585999-11586018 | None:intergenic | 40.0% | |
| AAAGTTGGAACTGCAGTTGT+AGG | - | chr7.3:11584267-11584286 | MS.gene22411:intron | 40.0% | |
| AACAGAGTGGTTACACAACA+GGG | - | chr7.3:11586416-11586435 | MS.gene22411:intron | 40.0% | |
| AATATGCATGTGGCAGTGAT+TGG | - | chr7.3:11585901-11585920 | MS.gene22411:CDS | 40.0% | |
| AATCTCGACTTAGGTGGTTT+GGG | - | chr7.3:11586185-11586204 | MS.gene22411:intron | 40.0% | |
| ACATTAAACACGAGGGTAAC+AGG | - | chr7.3:11583108-11583127 | MS.gene22411:intron | 40.0% | |
| AGATGCTTGAATCTCGACTT+AGG | - | chr7.3:11586176-11586195 | MS.gene22411:intron | 40.0% | |
| AGTGGCTGAAGAGTTGAAAT+TGG | - | chr7.3:11583450-11583469 | MS.gene22411:intron | 40.0% | |
| ATACCTGCAATAAGTCCTGA+AGG | + | chr7.3:11584181-11584200 | None:intergenic | 40.0% | |
| CAAATCAAAACCAAACCACC+TGG | + | chr7.3:11585687-11585706 | None:intergenic | 40.0% | |
| CACAATGAAGTCGTTTCTGA+AGG | + | chr7.3:11584073-11584092 | None:intergenic | 40.0% | |
| CACGTAAAAATGTGAACCTG+GGG | + | chr7.3:11583007-11583026 | None:intergenic | 40.0% | |
| CTAGTAAGTGATATCGTTGC+AGG | + | chr7.3:11585260-11585279 | None:intergenic | 40.0% | |
| CTGCCACATGCATATTTAGT+AGG | + | chr7.3:11585897-11585916 | None:intergenic | 40.0% | |
| CTTCAGAAACGACTTCATTG+TGG | - | chr7.3:11584071-11584090 | MS.gene22411:intron | 40.0% | |
| GAAGAAACGAAATCCTCTTC+CGG | + | chr7.3:11583337-11583356 | None:intergenic | 40.0% | |
| GAAGAAATAGCAAAGCGAGT+AGG | - | chr7.3:11585106-11585125 | MS.gene22411:intron | 40.0% | |
| GAAGGCAACATTAAACACGA+GGG | - | chr7.3:11583101-11583120 | MS.gene22411:intron | 40.0% | |
| GATGATGATTCACTACCTCT+TGG | - | chr7.3:11583493-11583512 | MS.gene22411:intron | 40.0% | |
| GGATAAGGCAAACAATAAGG+AGG | - | chr7.3:11584493-11584512 | MS.gene22411:intron | 40.0% | |
| GGTCAATACGGCTTAAAGAA+AGG | - | chr7.3:11583643-11583662 | MS.gene22411:intron | 40.0% | |
| GGTGGATAAGGCAAACAATA+AGG | - | chr7.3:11584490-11584509 | MS.gene22411:intron | 40.0% | |
| GTTAATATGCACCCTCTTGA+TGG | - | chr7.3:11585985-11586004 | MS.gene22411:CDS | 40.0% | |
| GTTCTTTCCAAGTGAAGAGT+CGG | + | chr7.3:11583613-11583632 | None:intergenic | 40.0% | |
| TAAAGAAGACAAATCACCCC+AGG | - | chr7.3:11582988-11583007 | MS.gene22411:intron | 40.0% | |
| TAAGCTAGAACTAACCCAAG+AGG | + | chr7.3:11583511-11583530 | None:intergenic | 40.0% | |
| TGAAGGCAACATTAAACACG+AGG | - | chr7.3:11583100-11583119 | MS.gene22411:intron | 40.0% | |
| TTCCAAAACAATTCGTCTGC+CGG | - | chr7.3:11584530-11584549 | MS.gene22411:CDS | 40.0% | |
| TTGCAACATTAGAGAGAGTC+GGG | - | chr7.3:11586134-11586153 | MS.gene22411:intron | 40.0% | |
| TTTATGCCTGTATGTGAGGT+CGG | + | chr7.3:11586689-11586708 | None:intergenic | 40.0% | |
| TTTGCCTCCAAAAGAAAGGA+AGG | - | chr7.3:11586899-11586918 | MS.gene22411:intron | 40.0% | |
| ! | AAGGTACTCAGGCTAAGATT+TGG | - | chr7.3:11586918-11586937 | MS.gene22411:intron | 40.0% |
| ! | ACTTTTCGACACTCCTCATA+AGG | + | chr7.3:11584428-11584447 | None:intergenic | 40.0% |
| ! | AGTACCTTCCTTTCTTTTGG+AGG | + | chr7.3:11586906-11586925 | None:intergenic | 40.0% |
| ! | CTGAGTACCTTCCTTTCTTT+TGG | + | chr7.3:11586909-11586928 | None:intergenic | 40.0% |
| ! | CTTGTTTAAGGTTGATCCTC+AGG | - | chr7.3:11585844-11585863 | MS.gene22411:intron | 40.0% |
| ! | GGAAGAATTCTAGAAGGGAA+TGG | + | chr7.3:11582672-11582691 | None:intergenic | 40.0% |
| ! | GGAGAATTTCTATGCCCTTT+TGG | - | chr7.3:11585024-11585043 | MS.gene22411:intron | 40.0% |
| ! | GGGAAGGAAGAATTCTAGAA+GGG | + | chr7.3:11582677-11582696 | None:intergenic | 40.0% |
| ! | GGGTGATTTGTCTTCTTTAC+AGG | + | chr7.3:11582987-11583006 | None:intergenic | 40.0% |
| ! | GTCTTGCTATGTCTAACGAT+TGG | + | chr7.3:11586269-11586288 | None:intergenic | 40.0% |
| ! | TCAAGAGGGTGCATATTAAC+AGG | + | chr7.3:11585985-11586004 | None:intergenic | 40.0% |
| ! | TCAGAAATTGGCAAGGTGTT+GGG | - | chr7.3:11586969-11586988 | MS.gene22411:intron | 40.0% |
| ! | TTCAACTCCCCATTTTGTAC+TGG | - | chr7.3:11585350-11585369 | MS.gene22411:intron | 40.0% |
| !! | AGTAAGCGTAAGTACTGAAC+CGG | + | chr7.3:11584470-11584489 | None:intergenic | 40.0% |
| !! | CAAAAGAAAGGAAGGTACTC+AGG | - | chr7.3:11586907-11586926 | MS.gene22411:intron | 40.0% |
| !! | CTTTTGGAGGCAAAATACCT+AGG | + | chr7.3:11586893-11586912 | None:intergenic | 40.0% |
| !! | TTTTGGAAGGGAACCAACTT+TGG | - | chr7.3:11584010-11584029 | MS.gene22411:intron | 40.0% |
| !!! | ATGCCTGTTTTTGCAAGTGA+CGG | - | chr7.3:11586009-11586028 | MS.gene22411:CDS | 40.0% |
| !!! | CAGGTGGTTTGGTTTTGATT+TGG | - | chr7.3:11585685-11585704 | MS.gene22411:CDS | 40.0% |
| ACAGAGTGGTTACACAACAG+GGG | - | chr7.3:11586417-11586436 | MS.gene22411:intron | 45.0% | |
| ACTCCGTCACTTGCAAAAAC+AGG | + | chr7.3:11586015-11586034 | None:intergenic | 45.0% | |
| AGAATTCTTCCTTCCCCTTC+AGG | - | chr7.3:11582681-11582700 | MS.gene22411:CDS | 45.0% | |
| ATAGGAATACGGGTACCTGA+AGG | + | chr7.3:11582699-11582718 | None:intergenic | 45.0% | |
| ATGCTCTGCGCTTGTTCTTA+TGG | - | chr7.3:11583793-11583812 | MS.gene22411:intron | 45.0% | |
| CAACAGAGTGGTTACACAAC+AGG | - | chr7.3:11586415-11586434 | MS.gene22411:intron | 45.0% | |
| CAAGAGTAAGTGCATCCCAT+TGG | + | chr7.3:11583393-11583412 | None:intergenic | 45.0% | |
| CCACTCACCAGTACAAAATG+GGG | + | chr7.3:11585360-11585379 | None:intergenic | 45.0% | |
| CTAGAAGGGAATGGTGTAGA+CGG | + | chr7.3:11582663-11582682 | None:intergenic | 45.0% | |
| CTAGGCTCTCTAATTCCTAG+AGG | + | chr7.3:11586494-11586513 | None:intergenic | 45.0% | |
| CTGTTGTGTAACCACTCTGT+TGG | + | chr7.3:11586417-11586436 | None:intergenic | 45.0% | |
| GAAAAGTTCAAACCCCAAGC+TGG | - | chr7.3:11584441-11584460 | MS.gene22411:intron | 45.0% | |
| GAATCTCGACTTAGGTGGTT+TGG | - | chr7.3:11586184-11586203 | MS.gene22411:intron | 45.0% | |
| GCCACTCACCAGTACAAAAT+GGG | + | chr7.3:11585361-11585380 | None:intergenic | 45.0% | |
| GGAACCAACTTTGGCTGAAT+GGG | - | chr7.3:11584019-11584038 | MS.gene22411:intron | 45.0% | |
| GGGGAAGGAAGAATTCTAGA+AGG | + | chr7.3:11582678-11582697 | None:intergenic | 45.0% | |
| GGTAGTATGTTATGCTTCCC+AGG | + | chr7.3:11585617-11585636 | None:intergenic | 45.0% | |
| GGTTCAGTACTTACGCTTAC+TGG | - | chr7.3:11584469-11584488 | MS.gene22411:intron | 45.0% | |
| GTATGCAGCAGTTGCATCTT+CGG | - | chr7.3:11583190-11583209 | MS.gene22411:intron | 45.0% | |
| GTCAGAAATTGGCAAGGTGT+TGG | - | chr7.3:11586968-11586987 | MS.gene22411:intron | 45.0% | |
| TAAGGAGAGGGTCAGACAAT+TGG | - | chr7.3:11586998-11587017 | MS.gene22411:intron | 45.0% | |
| TACAAGAACTCCGCTTTCGA+TGG | - | chr7.3:11585165-11585184 | MS.gene22411:intron | 45.0% | |
| TAGGAATACGGGTACCTGAA+GGG | + | chr7.3:11582698-11582717 | None:intergenic | 45.0% | |
| TCAGTACTTACGCTTACTGG+TGG | - | chr7.3:11584472-11584491 | MS.gene22411:intron | 45.0% | |
| TCTAGCAGGCCCAATAAACA+AGG | + | chr7.3:11586607-11586626 | None:intergenic | 45.0% | |
| TGCAACATTAGAGAGAGTCG+GGG | - | chr7.3:11586135-11586154 | MS.gene22411:intron | 45.0% | |
| TGCTTGAATCTCGACTTAGG+TGG | - | chr7.3:11586179-11586198 | MS.gene22411:intron | 45.0% | |
| TGGATAACTGTCCAACAGAG+TGG | - | chr7.3:11586403-11586422 | MS.gene22411:CDS | 45.0% | |
| TTCCGCAATCTTGCCCAAAA+GGG | + | chr7.3:11585041-11585060 | None:intergenic | 45.0% | |
| TTGGAGGCAAAATACCTAGG+AGG | + | chr7.3:11586890-11586909 | None:intergenic | 45.0% | |
| ! | CTTACGCTTACTGGTGGATA+AGG | - | chr7.3:11584478-11584497 | MS.gene22411:intron | 45.0% |
| ! | TACCGGCAGACGAATTGTTT+TGG | + | chr7.3:11584535-11584554 | None:intergenic | 45.0% |
| ! | TTGAAGTGTGGATTGTCGGT+AGG | - | chr7.3:11584873-11584892 | MS.gene22411:intron | 45.0% |
| ! | TTTGCAAGTGACGGAGTGTT+GGG | - | chr7.3:11586018-11586037 | MS.gene22411:CDS | 45.0% |
| !! | AAGAGCATCGCGATGAGTAT+AGG | - | chr7.3:11582948-11582967 | MS.gene22411:intron | 45.0% |
| !! | TTTTGCAAGTGACGGAGTGT+TGG | - | chr7.3:11586017-11586036 | MS.gene22411:CDS | 45.0% |
| !! | ATTAAAAAAAATTAATGTAA+TGG | + | chr7.3:11584938-11584957 | None:intergenic | 5.0% |
| AAGAAGCTGCAGGAACAGCT+TGG | + | chr7.3:11582877-11582896 | None:intergenic | 50.0% | |
| ACTTTGGCTGAATGGGCAGA+TGG | - | chr7.3:11584026-11584045 | MS.gene22411:intron | 50.0% | |
| AGACTCGGACACAACTTTCC+AGG | - | chr7.3:11585204-11585223 | MS.gene22411:CDS | 50.0% | |
| AGGAATACGGGTACCTGAAG+GGG | + | chr7.3:11582697-11582716 | None:intergenic | 50.0% | |
| CGCCACTCACCAGTACAAAA+TGG | + | chr7.3:11585362-11585381 | None:intergenic | 50.0% | |
| CGGACACAACTTTCCAGGTA+GGG | - | chr7.3:11585209-11585228 | MS.gene22411:CDS | 50.0% | |
| CGTCAACTCATCAACATCGC+CGG | + | chr7.3:11583163-11583182 | None:intergenic | 50.0% | |
| CTCAAAACAAGCTGCTGCAG+TGG | - | chr7.3:11583432-11583451 | MS.gene22411:intron | 50.0% | |
| CTGCCTTCAGGACTTATTGC+AGG | - | chr7.3:11584175-11584194 | MS.gene22411:intron | 50.0% | |
| CTGTAACCGACCTCACATAC+AGG | - | chr7.3:11586680-11586699 | MS.gene22411:intron | 50.0% | |
| CTGTTCCTGCAGCTTCTTCT+TGG | - | chr7.3:11582879-11582898 | MS.gene22411:CDS | 50.0% | |
| CTTCCGCAATCTTGCCCAAA+AGG | + | chr7.3:11585042-11585061 | None:intergenic | 50.0% | |
| GATTCATGCCAACTTACGCC+TGG | - | chr7.3:11584115-11584134 | MS.gene22411:intron | 50.0% | |
| GCCTGCTGATGGTTTCCAAT+GGG | - | chr7.3:11583375-11583394 | MS.gene22411:intron | 50.0% | |
| GCTAAATATTACCAGGGGCG+TGG | - | chr7.3:11584149-11584168 | MS.gene22411:intron | 50.0% | |
| GGATTACCTTGGGAGAGACT+AGG | + | chr7.3:11586512-11586531 | None:intergenic | 50.0% | |
| GGGAACCAACTTTGGCTGAA+TGG | - | chr7.3:11584018-11584037 | MS.gene22411:intron | 50.0% | |
| GTGAACTACCAGGCGTAAGT+TGG | + | chr7.3:11584126-11584145 | None:intergenic | 50.0% | |
| GTTGGGTGTGTGTAAGGAGA+GGG | - | chr7.3:11586986-11587005 | MS.gene22411:intron | 50.0% | |
| TACCTAGGAGGTTGCGTACA+TGG | + | chr7.3:11586878-11586897 | None:intergenic | 50.0% | |
| TCAACTATGCTGCCTGCTGA+TGG | - | chr7.3:11583364-11583383 | MS.gene22411:intron | 50.0% | |
| TCCCATTGGAAACCATCAGC+AGG | + | chr7.3:11583379-11583398 | None:intergenic | 50.0% | |
| TCGGACACAACTTTCCAGGT+AGG | - | chr7.3:11585208-11585227 | MS.gene22411:CDS | 50.0% | |
| TCTGAAGGTCACGACAGCTA+AGG | + | chr7.3:11584058-11584077 | None:intergenic | 50.0% | |
| TCTGCCCATTCAGCCAAAGT+TGG | + | chr7.3:11584026-11584045 | None:intergenic | 50.0% | |
| TGCCTGCTGATGGTTTCCAA+TGG | - | chr7.3:11583374-11583393 | MS.gene22411:intron | 50.0% | |
| TGTTGGGTGTGTGTAAGGAG+AGG | - | chr7.3:11586985-11587004 | MS.gene22411:intron | 50.0% | |
| TTCGATGGAGCGAGCTGTAT+GGG | - | chr7.3:11585180-11585199 | MS.gene22411:intron | 50.0% | |
| TTTACGTTGAAGGCCCTACC+TGG | + | chr7.3:11585225-11585244 | None:intergenic | 50.0% | |
| TTTCGATGGAGCGAGCTGTA+TGG | - | chr7.3:11585179-11585198 | MS.gene22411:intron | 50.0% | |
| ! | AGGGAAGTATGGGCCTTATG+AGG | - | chr7.3:11584412-11584431 | MS.gene22411:intron | 50.0% |
| ! | GCAGGTATCGTCACTACCAA+TGG | - | chr7.3:11584193-11584212 | MS.gene22411:intron | 50.0% |
| ! | TGCCCTTTTGGGCAAGATTG+CGG | - | chr7.3:11585036-11585055 | MS.gene22411:intron | 50.0% |
| !! | CAAGGTGTTGGGTGTGTGTA+AGG | - | chr7.3:11586980-11586999 | MS.gene22411:intron | 50.0% |
| !! | CCCCATTTTGTACTGGTGAG+TGG | - | chr7.3:11585357-11585376 | MS.gene22411:intron | 50.0% |
| !! | CTTCAGATTGGCTTCTTCGC+CGG | - | chr7.3:11583315-11583334 | MS.gene22411:intron | 50.0% |
| !!! | CACTGCAGCAGCTTGTTTTG+AGG | + | chr7.3:11583434-11583453 | None:intergenic | 50.0% |
| ACAGCTCGCTCCATCGAAAG+CGG | + | chr7.3:11585178-11585197 | None:intergenic | 55.0% | |
| ACTGAACCGGCAACCAGCTT+GGG | + | chr7.3:11584457-11584476 | None:intergenic | 55.0% | |
| AGAGAGCCTAGTCTCTCCCA+AGG | - | chr7.3:11586503-11586522 | MS.gene22411:intron | 55.0% | |
| AGCCATGTACGCAACCTCCT+AGG | - | chr7.3:11586873-11586892 | MS.gene22411:intron | 55.0% | |
| ATACGGGTACCTGAAGGGGA+AGG | + | chr7.3:11582693-11582712 | None:intergenic | 55.0% | |
| GCAGGAACAGCTTGGTCATG+AGG | + | chr7.3:11582869-11582888 | None:intergenic | 55.0% | |
| GCTGAATGGGCAGATGGTGT+GGG | - | chr7.3:11584032-11584051 | MS.gene22411:intron | 55.0% | |
| GTAGGCCAAGAAGAAGCTGC+AGG | + | chr7.3:11582887-11582906 | None:intergenic | 55.0% | |
| TACTGAACCGGCAACCAGCT+TGG | + | chr7.3:11584458-11584477 | None:intergenic | 55.0% | |
| TCAAACCCCAAGCTGGTTGC+CGG | - | chr7.3:11584448-11584467 | MS.gene22411:intron | 55.0% | |
| ! | AGACTGGCCGACTCTTCACT+TGG | - | chr7.3:11583603-11583622 | MS.gene22411:intron | 55.0% |
| ! | ATTGGCTTCTTCGCCGGAAG+AGG | - | chr7.3:11583321-11583340 | MS.gene22411:intron | 55.0% |
| ! | GTGTGGATTGTCGGTAGGCA+TGG | - | chr7.3:11584878-11584897 | MS.gene22411:intron | 55.0% |
| CTGAACCGGCAACCAGCTTG+GGG | + | chr7.3:11584456-11584475 | None:intergenic | 60.0% | |
| GCGAGCTGTATGGGCAGACT+CGG | - | chr7.3:11585189-11585208 | MS.gene22411:intron | 60.0% | |
| GGCTGAATGGGCAGATGGTG+TGG | - | chr7.3:11584031-11584050 | MS.gene22411:intron | 60.0% | |
| GAAGGCAGAGACCACGCCCC+TGG | + | chr7.3:11584163-11584182 | None:intergenic | 70.0% | |
| GGGGCGTGGTCTCTGCCTTC+AGG | - | chr7.3:11584163-11584182 | MS.gene22411:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 11582651 | 11587097 | 11582651 | ID=MS.gene22411 |
| chr7.3 | mRNA | 11582651 | 11587097 | 11582651 | ID=MS.gene22411.t1;Parent=MS.gene22411 |
| chr7.3 | exon | 11587046 | 11587097 | 11587046 | ID=MS.gene22411.t1.exon1;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11587046 | 11587097 | 11587046 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11586739 | 11586890 | 11586739 | ID=MS.gene22411.t1.exon2;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11586739 | 11586890 | 11586739 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11586519 | 11586643 | 11586519 | ID=MS.gene22411.t1.exon3;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11586519 | 11586643 | 11586519 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11586233 | 11586427 | 11586233 | ID=MS.gene22411.t1.exon4;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11586233 | 11586427 | 11586233 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11585870 | 11586143 | 11585870 | ID=MS.gene22411.t1.exon5;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11585870 | 11586143 | 11585870 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11585552 | 11585782 | 11585552 | ID=MS.gene22411.t1.exon6;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11585552 | 11585782 | 11585552 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11585197 | 11585337 | 11585197 | ID=MS.gene22411.t1.exon7;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11585197 | 11585337 | 11585197 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11584523 | 11584723 | 11584523 | ID=MS.gene22411.t1.exon8;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11584523 | 11584723 | 11584523 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| chr7.3 | exon | 11582651 | 11582938 | 11582651 | ID=MS.gene22411.t1.exon9;Parent=MS.gene22411.t1 |
| chr7.3 | CDS | 11582651 | 11582938 | 11582651 | ID=cds.MS.gene22411.t1;Parent=MS.gene22411.t1 |
| Gene Sequence |
| Protein sequence |
