Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25652.t1 | XP_013450324.1 | 98.4 | 251 | 4 | 0 | 5 | 255 | 70 | 320 | 7.30E-137 | 496.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25652.t1 | O23044 | 55.9 | 256 | 107 | 4 | 5 | 255 | 71 | 325 | 1.3e-73 | 277.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25652.t1 | G8A179 | 98.4 | 251 | 4 | 0 | 5 | 255 | 70 | 320 | 5.3e-137 | 496.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene25652 | 0.810757 | 9.84E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene25652 | 0.824622 | 7.31E-54 | -1.69E-46 |
| MS.gene050133 | MS.gene25652 | 0.802272 | 6.07E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene25652 | 0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene051158 | MS.gene25652 | 0.832369 | 9.83E-56 | -1.69E-46 |
| MS.gene051996 | MS.gene25652 | 0.834345 | 3.16E-56 | -1.69E-46 |
| MS.gene052011 | MS.gene25652 | 0.826408 | 2.76E-54 | -1.69E-46 |
| MS.gene052211 | MS.gene25652 | 0.808859 | 2.52E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene25652 | 0.845911 | 3.02E-59 | -1.69E-46 |
| MS.gene05233 | MS.gene25652 | 0.824101 | 9.69E-54 | -1.69E-46 |
| MS.gene053406 | MS.gene25652 | 0.852557 | 4.27E-61 | -1.69E-46 |
| MS.gene054138 | MS.gene25652 | 0.814312 | 1.64E-51 | -1.69E-46 |
| MS.gene054146 | MS.gene25652 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene054147 | MS.gene25652 | 0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene054277 | MS.gene25652 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene25652 | 0.839886 | 1.21E-57 | -1.69E-46 |
| MS.gene055240 | MS.gene25652 | 0.820032 | 8.50E-53 | -1.69E-46 |
| MS.gene055601 | MS.gene25652 | 0.830287 | 3.20E-55 | -1.69E-46 |
| MS.gene056330 | MS.gene25652 | 0.851555 | 8.23E-61 | -1.69E-46 |
| MS.gene056590 | MS.gene25652 | 0.808073 | 3.70E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene25652 | 0.806126 | 9.57E-50 | -1.69E-46 |
| MS.gene056680 | MS.gene25652 | 0.822 | 2.99E-53 | -1.69E-46 |
| MS.gene056690 | MS.gene25652 | 0.800333 | 1.51E-48 | -1.69E-46 |
| MS.gene056691 | MS.gene25652 | 0.814576 | 1.44E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene25652 | 0.836031 | 1.19E-56 | -1.69E-46 |
| MS.gene056920 | MS.gene25652 | 0.848957 | 4.40E-60 | -1.69E-46 |
| MS.gene056922 | MS.gene25652 | 0.822782 | 1.97E-53 | -1.69E-46 |
| MS.gene056923 | MS.gene25652 | 0.831756 | 1.39E-55 | -1.69E-46 |
| MS.gene056924 | MS.gene25652 | 0.837113 | 6.29E-57 | -1.69E-46 |
| MS.gene057544 | MS.gene25652 | 0.815542 | 8.77E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene25652 | 0.816299 | 5.94E-52 | -1.69E-46 |
| MS.gene058381 | MS.gene25652 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene059043 | MS.gene25652 | 0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene059891 | MS.gene25652 | 0.801021 | 1.10E-48 | -1.69E-46 |
| MS.gene059892 | MS.gene25652 | 0.831337 | 1.77E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene25652 | 0.877644 | 5.32E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25652.t1 | MTR_7g107520 | 98.406 | 251 | 4 | 0 | 5 | 255 | 70 | 320 | 0.0 | 510 |
| MS.gene25652.t1 | MTR_4g046713 | 54.510 | 255 | 112 | 3 | 5 | 255 | 72 | 326 | 7.87e-96 | 284 |
| MS.gene25652.t1 | MTR_2g088770 | 53.906 | 256 | 112 | 4 | 5 | 255 | 71 | 325 | 1.18e-90 | 271 |
| MS.gene25652.t1 | MTR_8g075100 | 46.484 | 256 | 125 | 5 | 5 | 255 | 71 | 319 | 8.48e-76 | 233 |
| MS.gene25652.t1 | MTR_5g022870 | 48.263 | 259 | 116 | 8 | 5 | 255 | 68 | 316 | 2.64e-74 | 229 |
| MS.gene25652.t1 | MTR_3g092990 | 48.077 | 260 | 130 | 4 | 1 | 255 | 56 | 315 | 1.43e-73 | 227 |
| MS.gene25652.t1 | MTR_3g092990 | 48.249 | 257 | 128 | 4 | 4 | 255 | 70 | 326 | 2.45e-73 | 227 |
| MS.gene25652.t1 | MTR_1g038680 | 48.649 | 259 | 125 | 5 | 5 | 255 | 74 | 332 | 8.66e-73 | 226 |
| MS.gene25652.t1 | MTR_1g025980 | 46.245 | 253 | 129 | 4 | 5 | 254 | 69 | 317 | 2.88e-72 | 224 |
| MS.gene25652.t1 | MTR_2g029815 | 46.693 | 257 | 131 | 4 | 5 | 255 | 74 | 330 | 2.15e-70 | 220 |
| MS.gene25652.t1 | MTR_2g029820 | 46.693 | 257 | 131 | 4 | 5 | 255 | 74 | 330 | 2.45e-70 | 220 |
| MS.gene25652.t1 | MTR_1g101830 | 46.457 | 254 | 130 | 4 | 5 | 255 | 72 | 322 | 4.21e-70 | 218 |
| MS.gene25652.t1 | MTR_2g029830 | 45.211 | 261 | 137 | 4 | 1 | 255 | 1 | 261 | 1.01e-68 | 214 |
| MS.gene25652.t1 | MTR_2g008710 | 45.349 | 258 | 130 | 4 | 5 | 255 | 72 | 325 | 1.64e-68 | 214 |
| MS.gene25652.t1 | MTR_4g125940 | 44.402 | 259 | 134 | 4 | 5 | 255 | 18 | 274 | 7.64e-68 | 211 |
| MS.gene25652.t1 | MTR_2g029830 | 45.703 | 256 | 133 | 4 | 6 | 255 | 74 | 329 | 2.69e-67 | 212 |
| MS.gene25652.t1 | MTR_4g125940 | 44.402 | 259 | 134 | 4 | 5 | 255 | 73 | 329 | 6.87e-67 | 210 |
| MS.gene25652.t1 | MTR_2g029850 | 45.914 | 257 | 133 | 4 | 5 | 255 | 74 | 330 | 1.81e-66 | 210 |
| MS.gene25652.t1 | MTR_2g029860 | 45.914 | 257 | 133 | 4 | 5 | 255 | 74 | 330 | 2.33e-66 | 210 |
| MS.gene25652.t1 | MTR_7g029030 | 44.922 | 256 | 131 | 5 | 5 | 255 | 70 | 320 | 4.35e-66 | 208 |
| MS.gene25652.t1 | MTR_1g054205 | 44.358 | 257 | 136 | 5 | 6 | 255 | 70 | 326 | 2.18e-65 | 206 |
| MS.gene25652.t1 | MTR_5g017860 | 46.667 | 255 | 130 | 5 | 6 | 255 | 73 | 326 | 3.62e-65 | 206 |
| MS.gene25652.t1 | MTR_2g029800 | 43.750 | 256 | 138 | 4 | 6 | 255 | 75 | 330 | 4.83e-65 | 206 |
| MS.gene25652.t1 | MTR_7g093370 | 44.747 | 257 | 135 | 5 | 6 | 255 | 115 | 371 | 2.39e-64 | 205 |
| MS.gene25652.t1 | MTR_2g008730 | 45.228 | 241 | 124 | 3 | 22 | 255 | 62 | 301 | 3.57e-64 | 202 |
| MS.gene25652.t1 | MTR_2g028980 | 43.580 | 257 | 139 | 4 | 5 | 255 | 74 | 330 | 5.91e-64 | 204 |
| MS.gene25652.t1 | MTR_6g027440 | 44.269 | 253 | 133 | 5 | 6 | 255 | 67 | 314 | 7.68e-64 | 202 |
| MS.gene25652.t1 | MTR_1g009750 | 45.736 | 258 | 132 | 5 | 5 | 255 | 72 | 328 | 4.64e-63 | 201 |
| MS.gene25652.t1 | MTR_4g114210 | 41.313 | 259 | 140 | 4 | 5 | 255 | 66 | 320 | 6.22e-63 | 200 |
| MS.gene25652.t1 | MTR_2g029740 | 44.358 | 257 | 137 | 4 | 5 | 255 | 74 | 330 | 1.15e-62 | 200 |
| MS.gene25652.t1 | MTR_5g017850 | 44.706 | 255 | 135 | 6 | 6 | 255 | 73 | 326 | 1.77e-62 | 199 |
| MS.gene25652.t1 | MTR_4g095450 | 45.914 | 257 | 127 | 5 | 5 | 254 | 72 | 323 | 1.77e-62 | 199 |
| MS.gene25652.t1 | MTR_5g021060 | 44.922 | 256 | 136 | 4 | 5 | 255 | 75 | 330 | 4.05e-62 | 198 |
| MS.gene25652.t1 | MTR_0155s0040 | 41.732 | 254 | 135 | 7 | 5 | 255 | 72 | 315 | 4.95e-62 | 197 |
| MS.gene25652.t1 | MTR_8g062780 | 42.578 | 256 | 141 | 4 | 6 | 255 | 69 | 324 | 7.25e-62 | 197 |
| MS.gene25652.t1 | MTR_1g086320 | 42.471 | 259 | 141 | 4 | 5 | 255 | 75 | 333 | 1.42e-61 | 197 |
| MS.gene25652.t1 | MTR_5g016010 | 43.191 | 257 | 139 | 4 | 5 | 254 | 72 | 328 | 5.66e-61 | 195 |
| MS.gene25652.t1 | MTR_2g029560 | 43.191 | 257 | 140 | 4 | 5 | 255 | 69 | 325 | 1.67e-60 | 194 |
| MS.gene25652.t1 | MTR_1g077000 | 40.945 | 254 | 137 | 5 | 5 | 255 | 84 | 327 | 2.66e-60 | 193 |
| MS.gene25652.t1 | MTR_7g086820 | 40.551 | 254 | 142 | 5 | 5 | 255 | 65 | 312 | 6.05e-60 | 192 |
| MS.gene25652.t1 | MTR_2g029750 | 43.969 | 257 | 138 | 4 | 5 | 255 | 74 | 330 | 1.12e-59 | 192 |
| MS.gene25652.t1 | MTR_2g029730 | 43.969 | 257 | 138 | 4 | 5 | 255 | 70 | 326 | 1.74e-59 | 192 |
| MS.gene25652.t1 | MTR_2g040000 | 43.462 | 260 | 134 | 6 | 6 | 255 | 75 | 331 | 1.81e-59 | 191 |
| MS.gene25652.t1 | MTR_8g076820 | 43.750 | 256 | 139 | 4 | 5 | 255 | 75 | 330 | 2.10e-59 | 191 |
| MS.gene25652.t1 | MTR_1g086490 | 40.226 | 266 | 144 | 4 | 5 | 255 | 75 | 340 | 4.37e-59 | 191 |
| MS.gene25652.t1 | MTR_2g437770 | 42.188 | 256 | 138 | 5 | 3 | 255 | 93 | 341 | 6.61e-59 | 190 |
| MS.gene25652.t1 | MTR_3g094650 | 42.460 | 252 | 132 | 5 | 6 | 251 | 74 | 318 | 1.14e-58 | 189 |
| MS.gene25652.t1 | MTR_2g084080 | 41.732 | 254 | 137 | 4 | 6 | 255 | 71 | 317 | 3.11e-58 | 187 |
| MS.gene25652.t1 | MTR_3g072190 | 40.625 | 256 | 141 | 4 | 4 | 255 | 3 | 251 | 5.46e-58 | 185 |
| MS.gene25652.t1 | MTR_4g127670 | 43.411 | 258 | 136 | 5 | 5 | 255 | 69 | 323 | 1.90e-57 | 186 |
| MS.gene25652.t1 | MTR_4g087965 | 40.310 | 258 | 145 | 6 | 5 | 253 | 87 | 344 | 2.52e-57 | 186 |
| MS.gene25652.t1 | MTR_2g084110 | 41.732 | 254 | 137 | 4 | 6 | 255 | 71 | 317 | 5.77e-57 | 184 |
| MS.gene25652.t1 | MTR_3g072190 | 40.945 | 254 | 139 | 4 | 6 | 255 | 72 | 318 | 8.92e-57 | 184 |
| MS.gene25652.t1 | MTR_2g084090 | 41.961 | 255 | 136 | 5 | 6 | 255 | 71 | 318 | 1.74e-56 | 183 |
| MS.gene25652.t1 | MTR_2g099175 | 40.310 | 258 | 142 | 5 | 6 | 255 | 82 | 335 | 4.47e-56 | 183 |
| MS.gene25652.t1 | MTR_2g084010 | 42.745 | 255 | 134 | 4 | 6 | 255 | 71 | 318 | 6.27e-56 | 182 |
| MS.gene25652.t1 | MTR_4g133800 | 42.023 | 257 | 138 | 6 | 3 | 255 | 84 | 333 | 1.58e-55 | 181 |
| MS.gene25652.t1 | MTR_2g084020 | 41.961 | 255 | 136 | 4 | 6 | 255 | 71 | 318 | 2.89e-55 | 180 |
| MS.gene25652.t1 | MTR_7g086870 | 38.976 | 254 | 143 | 5 | 5 | 255 | 67 | 311 | 3.70e-55 | 180 |
| MS.gene25652.t1 | MTR_4g122640 | 42.969 | 256 | 137 | 6 | 6 | 255 | 84 | 336 | 4.81e-55 | 180 |
| MS.gene25652.t1 | MTR_1g090760 | 40.310 | 258 | 145 | 6 | 6 | 255 | 74 | 330 | 1.99e-54 | 178 |
| MS.gene25652.t1 | MTR_1g115900 | 41.085 | 258 | 137 | 6 | 5 | 255 | 72 | 321 | 2.32e-54 | 178 |
| MS.gene25652.t1 | MTR_2g029910 | 41.473 | 258 | 144 | 5 | 5 | 255 | 75 | 332 | 3.38e-54 | 178 |
| MS.gene25652.t1 | MTR_1g009750 | 42.023 | 257 | 126 | 6 | 5 | 255 | 72 | 311 | 1.17e-53 | 176 |
| MS.gene25652.t1 | MTR_4g030890 | 39.370 | 254 | 147 | 5 | 6 | 255 | 146 | 396 | 3.58e-53 | 177 |
| MS.gene25652.t1 | MTR_7g072510 | 39.608 | 255 | 143 | 4 | 5 | 255 | 65 | 312 | 4.22e-53 | 174 |
| MS.gene25652.t1 | MTR_4g083710 | 39.768 | 259 | 142 | 5 | 5 | 255 | 72 | 324 | 6.87e-53 | 174 |
| MS.gene25652.t1 | MTR_2g084000 | 40.392 | 255 | 140 | 4 | 6 | 255 | 72 | 319 | 1.16e-52 | 173 |
| MS.gene25652.t1 | MTR_1g022970 | 42.023 | 257 | 143 | 4 | 5 | 255 | 91 | 347 | 1.30e-52 | 174 |
| MS.gene25652.t1 | MTR_5g014100 | 41.154 | 260 | 143 | 5 | 6 | 255 | 72 | 331 | 3.88e-52 | 172 |
| MS.gene25652.t1 | MTR_5g083860 | 39.453 | 256 | 142 | 5 | 6 | 255 | 77 | 325 | 5.97e-52 | 172 |
| MS.gene25652.t1 | MTR_7g026990 | 40.467 | 257 | 137 | 6 | 5 | 255 | 76 | 322 | 5.01e-51 | 169 |
| MS.gene25652.t1 | MTR_6g043460 | 37.500 | 256 | 147 | 6 | 5 | 255 | 81 | 328 | 6.38e-51 | 170 |
| MS.gene25652.t1 | MTR_6g043280 | 39.216 | 255 | 141 | 7 | 6 | 255 | 87 | 332 | 2.08e-50 | 168 |
| MS.gene25652.t1 | MTR_4g029190 | 39.300 | 257 | 143 | 5 | 5 | 255 | 91 | 340 | 2.18e-50 | 168 |
| MS.gene25652.t1 | MTR_4g029180 | 38.672 | 256 | 144 | 6 | 6 | 255 | 73 | 321 | 2.85e-50 | 167 |
| MS.gene25652.t1 | MTR_6g043240 | 39.844 | 256 | 138 | 7 | 5 | 255 | 87 | 331 | 3.98e-50 | 168 |
| MS.gene25652.t1 | MTR_4g029170 | 39.062 | 256 | 143 | 6 | 6 | 255 | 73 | 321 | 4.11e-50 | 167 |
| MS.gene25652.t1 | MTR_7g107500 | 91.765 | 85 | 7 | 0 | 171 | 255 | 13 | 97 | 5.16e-50 | 159 |
| MS.gene25652.t1 | MTR_3g094670 | 40.873 | 252 | 136 | 5 | 6 | 251 | 74 | 318 | 6.54e-50 | 166 |
| MS.gene25652.t1 | MTR_5g074970 | 38.760 | 258 | 143 | 6 | 6 | 255 | 76 | 326 | 7.39e-50 | 166 |
| MS.gene25652.t1 | MTR_0286s0010 | 40.078 | 257 | 144 | 6 | 6 | 255 | 81 | 334 | 7.53e-50 | 167 |
| MS.gene25652.t1 | MTR_6g008075 | 40.078 | 257 | 144 | 6 | 6 | 255 | 81 | 334 | 7.53e-50 | 167 |
| MS.gene25652.t1 | MTR_4g031140 | 37.008 | 254 | 153 | 5 | 6 | 255 | 74 | 324 | 2.60e-49 | 166 |
| MS.gene25652.t1 | MTR_5g074710 | 41.538 | 260 | 133 | 8 | 6 | 255 | 71 | 321 | 7.23e-49 | 164 |
| MS.gene25652.t1 | MTR_4g074995 | 38.931 | 262 | 127 | 7 | 5 | 255 | 69 | 308 | 8.17e-49 | 163 |
| MS.gene25652.t1 | MTR_4g029200 | 37.647 | 255 | 148 | 4 | 5 | 255 | 91 | 338 | 2.80e-48 | 162 |
| MS.gene25652.t1 | MTR_7g072480 | 38.039 | 255 | 147 | 4 | 5 | 255 | 69 | 316 | 3.22e-48 | 162 |
| MS.gene25652.t1 | MTR_3g094630 | 41.016 | 256 | 138 | 5 | 6 | 255 | 74 | 322 | 4.74e-48 | 162 |
| MS.gene25652.t1 | MTR_2g008160 | 39.231 | 260 | 144 | 6 | 5 | 255 | 69 | 323 | 6.15e-48 | 161 |
| MS.gene25652.t1 | MTR_3g105790 | 41.245 | 257 | 141 | 5 | 5 | 255 | 70 | 322 | 7.09e-48 | 161 |
| MS.gene25652.t1 | MTR_3g466180 | 39.370 | 254 | 143 | 4 | 6 | 255 | 77 | 323 | 2.81e-47 | 160 |
| MS.gene25652.t1 | MTR_5g074860 | 39.615 | 260 | 136 | 9 | 6 | 254 | 75 | 324 | 1.11e-46 | 158 |
| MS.gene25652.t1 | MTR_5g074760 | 40.769 | 260 | 135 | 9 | 6 | 255 | 71 | 321 | 1.27e-46 | 158 |
| MS.gene25652.t1 | MTR_5g074740 | 40.840 | 262 | 132 | 10 | 6 | 255 | 71 | 321 | 2.80e-46 | 157 |
| MS.gene25652.t1 | MTR_3g466200 | 36.576 | 257 | 149 | 6 | 6 | 255 | 71 | 320 | 6.58e-46 | 156 |
| MS.gene25652.t1 | MTR_0147s0010 | 37.349 | 249 | 134 | 3 | 28 | 254 | 133 | 381 | 8.40e-46 | 157 |
| MS.gene25652.t1 | MTR_2g067440 | 35.336 | 283 | 149 | 6 | 5 | 254 | 105 | 386 | 8.97e-46 | 157 |
| MS.gene25652.t1 | MTR_2g077990 | 34.507 | 284 | 149 | 6 | 5 | 252 | 121 | 403 | 2.35e-45 | 157 |
| MS.gene25652.t1 | MTR_2g078610 | 34.859 | 284 | 148 | 6 | 5 | 252 | 121 | 403 | 5.64e-45 | 156 |
| MS.gene25652.t1 | MTR_5g049280 | 35.878 | 262 | 155 | 9 | 5 | 255 | 78 | 337 | 7.92e-45 | 154 |
| MS.gene25652.t1 | MTR_3g105790 | 40.984 | 244 | 137 | 4 | 18 | 255 | 4 | 246 | 1.24e-44 | 150 |
| MS.gene25652.t1 | MTR_4g074990 | 37.548 | 261 | 129 | 6 | 5 | 255 | 69 | 305 | 2.61e-44 | 151 |
| MS.gene25652.t1 | MTR_4g132490 | 35.409 | 257 | 157 | 6 | 5 | 255 | 74 | 327 | 1.53e-43 | 150 |
| MS.gene25652.t1 | MTR_1g066380 | 34.470 | 264 | 154 | 7 | 2 | 255 | 1 | 255 | 1.54e-43 | 148 |
| MS.gene25652.t1 | MTR_4g132110 | 36.398 | 261 | 151 | 7 | 3 | 255 | 75 | 328 | 2.16e-43 | 150 |
| MS.gene25652.t1 | MTR_3g467600 | 38.610 | 259 | 143 | 7 | 6 | 255 | 73 | 324 | 3.48e-43 | 149 |
| MS.gene25652.t1 | MTR_4g132110 | 35.714 | 266 | 151 | 7 | 3 | 255 | 75 | 333 | 1.49e-42 | 148 |
| MS.gene25652.t1 | MTR_1g066380 | 34.483 | 261 | 152 | 7 | 5 | 255 | 72 | 323 | 9.74e-42 | 145 |
| MS.gene25652.t1 | MTR_5g033470 | 34.733 | 262 | 156 | 8 | 6 | 255 | 119 | 377 | 3.11e-41 | 145 |
| MS.gene25652.t1 | MTR_1g066710 | 35.632 | 261 | 149 | 7 | 5 | 255 | 72 | 323 | 3.41e-41 | 144 |
| MS.gene25652.t1 | MTR_2g078280 | 34.432 | 273 | 142 | 6 | 5 | 241 | 121 | 392 | 6.93e-41 | 145 |
| MS.gene25652.t1 | MTR_1g066640 | 34.363 | 259 | 151 | 7 | 7 | 255 | 74 | 323 | 1.99e-40 | 142 |
| MS.gene25652.t1 | MTR_2g067450 | 35.798 | 257 | 156 | 5 | 5 | 254 | 55 | 309 | 5.41e-39 | 138 |
| MS.gene25652.t1 | MTR_4g074980 | 36.471 | 255 | 128 | 7 | 5 | 255 | 70 | 294 | 5.45e-39 | 137 |
| MS.gene25652.t1 | MTR_2g029880 | 42.857 | 189 | 95 | 4 | 70 | 255 | 10 | 188 | 3.91e-38 | 133 |
| MS.gene25652.t1 | MTR_1g066680 | 32.812 | 256 | 161 | 4 | 6 | 255 | 72 | 322 | 9.43e-38 | 135 |
| MS.gene25652.t1 | MTR_4g074980 | 37.824 | 193 | 102 | 4 | 5 | 188 | 70 | 253 | 2.35e-34 | 124 |
| MS.gene25652.t1 | MTR_2g008160 | 34.231 | 260 | 122 | 6 | 5 | 255 | 69 | 288 | 1.49e-33 | 123 |
| MS.gene25652.t1 | MTR_5g074700 | 36.681 | 229 | 117 | 9 | 34 | 255 | 7 | 214 | 5.28e-33 | 119 |
| MS.gene25652.t1 | MTR_3g072210 | 36.508 | 189 | 110 | 4 | 70 | 255 | 57 | 238 | 1.34e-30 | 114 |
| MS.gene25652.t1 | MTR_2g077980 | 27.465 | 284 | 160 | 7 | 12 | 252 | 1 | 281 | 9.27e-28 | 107 |
| MS.gene25652.t1 | MTR_2g008160 | 47.287 | 129 | 61 | 4 | 5 | 130 | 69 | 193 | 2.18e-27 | 105 |
| MS.gene25652.t1 | MTR_5g074860 | 32.308 | 260 | 116 | 10 | 6 | 254 | 75 | 285 | 8.38e-26 | 102 |
| MS.gene25652.t1 | MTR_7g086790 | 34.021 | 194 | 105 | 4 | 7 | 198 | 17 | 189 | 6.87e-25 | 98.2 |
| MS.gene25652.t1 | MTR_7g072490 | 32.479 | 234 | 93 | 6 | 6 | 235 | 2 | 174 | 4.75e-24 | 96.3 |
| MS.gene25652.t1 | MTR_5g058120 | 33.540 | 161 | 95 | 3 | 92 | 251 | 6 | 155 | 6.67e-23 | 94.4 |
| MS.gene25652.t1 | MTR_2g078560 | 28.837 | 215 | 121 | 3 | 70 | 252 | 103 | 317 | 1.02e-21 | 92.4 |
| MS.gene25652.t1 | MTR_1g089005 | 75.000 | 56 | 14 | 0 | 10 | 65 | 71 | 126 | 1.11e-20 | 85.9 |
| MS.gene25652.t1 | MTR_6g048160 | 62.295 | 61 | 20 | 1 | 5 | 65 | 28 | 85 | 1.51e-18 | 78.6 |
| MS.gene25652.t1 | MTR_1g098320 | 50.000 | 78 | 38 | 1 | 179 | 255 | 47 | 124 | 4.01e-16 | 73.6 |
| MS.gene25652.t1 | MTR_6g071110 | 43.529 | 85 | 38 | 2 | 26 | 110 | 80 | 154 | 7.58e-15 | 70.5 |
| MS.gene25652.t1 | MTR_3g072260 | 55.738 | 61 | 26 | 1 | 6 | 65 | 72 | 132 | 8.61e-14 | 67.0 |
| MS.gene25652.t1 | MTR_4g114220 | 41.000 | 100 | 38 | 4 | 5 | 96 | 48 | 134 | 3.24e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25652.t1 | AT1G05260 | 55.859 | 256 | 107 | 4 | 5 | 255 | 71 | 325 | 2.41e-96 | 285 |
| MS.gene25652.t1 | AT4G11290 | 55.253 | 257 | 109 | 4 | 5 | 255 | 70 | 326 | 1.77e-92 | 276 |
| MS.gene25652.t1 | AT5G15180 | 52.941 | 255 | 114 | 4 | 5 | 255 | 77 | 329 | 1.27e-88 | 266 |
| MS.gene25652.t1 | AT2G39040 | 51.538 | 260 | 117 | 4 | 5 | 255 | 91 | 350 | 3.96e-86 | 260 |
| MS.gene25652.t1 | AT3G01190 | 53.725 | 255 | 110 | 5 | 5 | 255 | 71 | 321 | 6.35e-86 | 259 |
| MS.gene25652.t1 | AT1G05240 | 49.805 | 257 | 121 | 4 | 5 | 255 | 71 | 325 | 2.43e-85 | 257 |
| MS.gene25652.t1 | AT1G05250 | 49.805 | 257 | 121 | 4 | 5 | 255 | 71 | 325 | 2.43e-85 | 257 |
| MS.gene25652.t1 | AT3G21770 | 51.373 | 255 | 118 | 4 | 5 | 254 | 74 | 327 | 1.16e-84 | 256 |
| MS.gene25652.t1 | AT5G42180 | 45.850 | 253 | 130 | 4 | 5 | 254 | 68 | 316 | 6.05e-72 | 223 |
| MS.gene25652.t1 | AT5G64120 | 45.669 | 254 | 130 | 5 | 5 | 255 | 80 | 328 | 2.43e-68 | 214 |
| MS.gene25652.t1 | AT2G24800 | 48.062 | 258 | 123 | 6 | 5 | 255 | 76 | 329 | 1.28e-66 | 209 |
| MS.gene25652.t1 | AT5G51890 | 45.098 | 255 | 133 | 5 | 5 | 255 | 71 | 322 | 1.47e-66 | 209 |
| MS.gene25652.t1 | AT5G14130 | 45.312 | 256 | 133 | 5 | 5 | 255 | 77 | 330 | 6.13e-65 | 205 |
| MS.gene25652.t1 | AT5G14130 | 45.312 | 256 | 133 | 5 | 5 | 255 | 118 | 371 | 2.32e-64 | 205 |
| MS.gene25652.t1 | AT5G06720 | 43.750 | 256 | 138 | 4 | 6 | 255 | 78 | 333 | 2.69e-64 | 204 |
| MS.gene25652.t1 | AT5G19890 | 44.186 | 258 | 130 | 6 | 6 | 255 | 76 | 327 | 6.38e-64 | 202 |
| MS.gene25652.t1 | AT4G31760 | 45.525 | 257 | 130 | 5 | 5 | 255 | 74 | 326 | 1.61e-63 | 202 |
| MS.gene25652.t1 | AT2G41480 | 41.313 | 259 | 140 | 4 | 5 | 255 | 74 | 328 | 1.76e-63 | 201 |
| MS.gene25652.t1 | AT5G64100 | 42.802 | 257 | 134 | 5 | 5 | 255 | 82 | 331 | 2.02e-63 | 201 |
| MS.gene25652.t1 | AT5G17820 | 41.339 | 254 | 137 | 5 | 5 | 255 | 69 | 313 | 8.15e-63 | 199 |
| MS.gene25652.t1 | AT4G33420 | 42.126 | 254 | 134 | 5 | 5 | 255 | 82 | 325 | 8.54e-63 | 200 |
| MS.gene25652.t1 | AT5G06730 | 44.141 | 256 | 137 | 4 | 6 | 255 | 79 | 334 | 3.39e-62 | 199 |
| MS.gene25652.t1 | AT2G18140 | 41.406 | 256 | 145 | 4 | 5 | 255 | 80 | 335 | 3.78e-62 | 198 |
| MS.gene25652.t1 | AT5G64110 | 43.580 | 257 | 134 | 4 | 5 | 255 | 79 | 330 | 4.40e-62 | 198 |
| MS.gene25652.t1 | AT4G33420 | 42.126 | 254 | 134 | 5 | 5 | 255 | 129 | 372 | 4.41e-62 | 199 |
| MS.gene25652.t1 | AT2G18150 | 42.188 | 256 | 143 | 4 | 5 | 255 | 81 | 336 | 6.74e-62 | 198 |
| MS.gene25652.t1 | AT5G67400 | 43.580 | 257 | 138 | 4 | 6 | 255 | 73 | 329 | 6.96e-62 | 197 |
| MS.gene25652.t1 | AT4G37530 | 43.191 | 257 | 139 | 4 | 6 | 255 | 73 | 329 | 8.01e-62 | 197 |
| MS.gene25652.t1 | AT5G19880 | 43.629 | 259 | 137 | 6 | 6 | 255 | 71 | 329 | 8.73e-62 | 197 |
| MS.gene25652.t1 | AT1G71695 | 43.580 | 257 | 133 | 6 | 5 | 255 | 89 | 339 | 1.23e-61 | 198 |
| MS.gene25652.t1 | AT5G39580 | 42.745 | 255 | 137 | 6 | 5 | 255 | 70 | 319 | 1.30e-61 | 196 |
| MS.gene25652.t1 | AT5G17820 | 41.339 | 254 | 137 | 5 | 5 | 255 | 122 | 366 | 1.59e-61 | 197 |
| MS.gene25652.t1 | AT3G49960 | 44.358 | 257 | 136 | 4 | 6 | 255 | 73 | 329 | 2.80e-61 | 196 |
| MS.gene25652.t1 | AT4G36430 | 41.406 | 256 | 145 | 4 | 5 | 255 | 75 | 330 | 5.71e-61 | 195 |
| MS.gene25652.t1 | AT3G03670 | 39.764 | 254 | 150 | 2 | 5 | 255 | 68 | 321 | 2.16e-60 | 193 |
| MS.gene25652.t1 | AT2G38390 | 44.186 | 258 | 137 | 5 | 5 | 255 | 76 | 333 | 2.54e-60 | 194 |
| MS.gene25652.t1 | AT5G66390 | 43.969 | 257 | 137 | 5 | 5 | 255 | 78 | 333 | 5.97e-60 | 193 |
| MS.gene25652.t1 | AT4G37520 | 42.353 | 255 | 141 | 4 | 6 | 255 | 73 | 326 | 1.41e-59 | 191 |
| MS.gene25652.t1 | AT2G18980 | 43.411 | 258 | 135 | 5 | 5 | 255 | 70 | 323 | 1.87e-59 | 191 |
| MS.gene25652.t1 | AT4G37520 | 42.023 | 257 | 142 | 4 | 6 | 255 | 73 | 329 | 1.90e-59 | 191 |
| MS.gene25652.t1 | AT2G38380 | 44.186 | 258 | 137 | 5 | 5 | 255 | 76 | 333 | 2.59e-59 | 191 |
| MS.gene25652.t1 | AT4G30170 | 41.860 | 258 | 139 | 5 | 5 | 255 | 72 | 325 | 1.50e-58 | 189 |
| MS.gene25652.t1 | AT3G32980 | 42.471 | 259 | 139 | 5 | 6 | 255 | 77 | 334 | 1.93e-58 | 189 |
| MS.gene25652.t1 | AT1G14550 | 41.313 | 259 | 136 | 6 | 5 | 255 | 71 | 321 | 3.06e-58 | 188 |
| MS.gene25652.t1 | AT4G08770 | 41.085 | 258 | 144 | 5 | 6 | 255 | 70 | 327 | 1.49e-57 | 187 |
| MS.gene25652.t1 | AT5G22410 | 39.130 | 253 | 142 | 5 | 6 | 251 | 74 | 321 | 1.75e-57 | 186 |
| MS.gene25652.t1 | AT3G50990 | 41.961 | 255 | 143 | 3 | 6 | 255 | 87 | 341 | 2.70e-57 | 186 |
| MS.gene25652.t1 | AT1G44970 | 43.580 | 257 | 139 | 4 | 5 | 255 | 90 | 346 | 1.07e-55 | 182 |
| MS.gene25652.t1 | AT5G24070 | 39.535 | 258 | 143 | 5 | 6 | 255 | 83 | 335 | 1.28e-55 | 182 |
| MS.gene25652.t1 | AT1G49570 | 42.292 | 253 | 139 | 5 | 6 | 251 | 94 | 346 | 4.51e-55 | 181 |
| MS.gene25652.t1 | AT4G33870 | 37.413 | 286 | 141 | 5 | 5 | 252 | 113 | 398 | 1.97e-54 | 181 |
| MS.gene25652.t1 | AT4G26010 | 38.824 | 255 | 140 | 6 | 5 | 255 | 67 | 309 | 2.19e-54 | 177 |
| MS.gene25652.t1 | AT4G26010 | 38.824 | 255 | 140 | 6 | 5 | 255 | 95 | 337 | 3.40e-54 | 178 |
| MS.gene25652.t1 | AT3G28200 | 41.016 | 256 | 139 | 5 | 6 | 255 | 67 | 316 | 6.36e-54 | 177 |
| MS.gene25652.t1 | AT4G17690 | 40.310 | 258 | 141 | 6 | 5 | 255 | 71 | 322 | 8.94e-54 | 177 |
| MS.gene25652.t1 | AT5G05340 | 38.672 | 256 | 144 | 5 | 6 | 255 | 76 | 324 | 9.96e-54 | 176 |
| MS.gene25652.t1 | AT3G49110 | 39.922 | 258 | 147 | 4 | 6 | 255 | 79 | 336 | 1.18e-53 | 177 |
| MS.gene25652.t1 | AT2G22420 | 38.976 | 254 | 148 | 5 | 6 | 255 | 69 | 319 | 2.77e-53 | 175 |
| MS.gene25652.t1 | AT1G14540 | 39.216 | 255 | 144 | 4 | 6 | 255 | 67 | 315 | 4.73e-53 | 174 |
| MS.gene25652.t1 | AT2G35380 | 41.154 | 260 | 143 | 5 | 6 | 255 | 76 | 335 | 1.16e-52 | 174 |
| MS.gene25652.t1 | AT3G49120 | 39.922 | 258 | 147 | 4 | 6 | 255 | 78 | 335 | 1.19e-52 | 174 |
| MS.gene25652.t1 | AT5G40150 | 40.467 | 257 | 140 | 6 | 6 | 255 | 78 | 328 | 2.60e-52 | 173 |
| MS.gene25652.t1 | AT2G43480 | 37.984 | 258 | 147 | 5 | 6 | 255 | 83 | 335 | 2.70e-52 | 173 |
| MS.gene25652.t1 | AT1G77100 | 38.610 | 259 | 143 | 6 | 5 | 255 | 69 | 319 | 3.48e-52 | 172 |
| MS.gene25652.t1 | AT1G30870 | 38.372 | 258 | 142 | 7 | 6 | 255 | 97 | 345 | 1.22e-51 | 172 |
| MS.gene25652.t1 | AT4G37530 | 45.411 | 207 | 107 | 3 | 6 | 206 | 73 | 279 | 1.22e-51 | 170 |
| MS.gene25652.t1 | AT4G08780 | 38.760 | 258 | 150 | 4 | 6 | 255 | 70 | 327 | 1.28e-51 | 172 |
| MS.gene25652.t1 | AT4G25980 | 37.838 | 259 | 150 | 5 | 5 | 255 | 71 | 326 | 5.54e-51 | 169 |
| MS.gene25652.t1 | AT5G47000 | 37.354 | 257 | 151 | 5 | 5 | 255 | 78 | 330 | 2.20e-49 | 166 |
| MS.gene25652.t1 | AT2G34060 | 38.760 | 258 | 149 | 6 | 5 | 253 | 87 | 344 | 6.80e-49 | 164 |
| MS.gene25652.t1 | AT1G34510 | 37.255 | 255 | 144 | 6 | 5 | 255 | 67 | 309 | 1.19e-48 | 163 |
| MS.gene25652.t1 | AT1G68850 | 38.577 | 267 | 142 | 9 | 5 | 255 | 75 | 335 | 2.74e-48 | 162 |
| MS.gene25652.t1 | AT4G16270 | 38.431 | 255 | 150 | 5 | 6 | 255 | 96 | 348 | 6.17e-48 | 162 |
| MS.gene25652.t1 | AT2G35380 | 40.408 | 245 | 136 | 5 | 21 | 255 | 3 | 247 | 9.00e-48 | 159 |
| MS.gene25652.t1 | AT1G24110 | 39.147 | 258 | 146 | 6 | 6 | 255 | 68 | 322 | 1.12e-46 | 158 |
| MS.gene25652.t1 | AT5G58390 | 37.354 | 257 | 147 | 6 | 6 | 255 | 67 | 316 | 3.78e-46 | 157 |
| MS.gene25652.t1 | AT4G21960 | 36.293 | 259 | 154 | 5 | 3 | 255 | 74 | 327 | 2.90e-45 | 155 |
| MS.gene25652.t1 | AT5G58400 | 37.008 | 254 | 144 | 7 | 6 | 251 | 76 | 321 | 2.48e-42 | 147 |
| MS.gene25652.t1 | AT2G37130 | 34.351 | 262 | 152 | 8 | 5 | 255 | 44 | 296 | 9.16e-39 | 137 |
| MS.gene25652.t1 | AT2G37130 | 34.351 | 262 | 152 | 8 | 5 | 255 | 75 | 327 | 1.64e-38 | 137 |
| MS.gene25652.t1 | AT3G17070 | 33.333 | 261 | 160 | 8 | 5 | 255 | 83 | 339 | 1.10e-35 | 130 |
| MS.gene25652.t1 | AT3G17070 | 32.824 | 262 | 162 | 8 | 4 | 255 | 19 | 276 | 1.29e-35 | 128 |
| MS.gene25652.t1 | AT5G39580 | 46.341 | 123 | 60 | 3 | 5 | 125 | 70 | 188 | 7.17e-27 | 104 |
| MS.gene25652.t1 | AT2G24800 | 50.000 | 120 | 55 | 2 | 5 | 122 | 76 | 192 | 2.59e-26 | 103 |
| MS.gene25652.t1 | AT4G25980 | 42.623 | 122 | 65 | 3 | 5 | 124 | 116 | 234 | 1.54e-22 | 94.0 |
Find 0 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATATGTATAAATTAA+TGG | - | 51723:14942-14961 | None:intergenic | 10.0% |
| !! | TAAATATGAATGAATAAATC+AGG | - | 51723:14977-14996 | None:intergenic | 15.0% |
| !! | AACTAGTTAAATTAACATGT+TGG | + | 51723:15418-15437 | MS.gene25652:intron | 20.0% |
| !! | AGTTTAAGAATAAACCAAAT+TGG | + | 51723:15004-15023 | MS.gene25652:intron | 20.0% |
| !! | GTTTAAGAATAAACCAAATT+GGG | + | 51723:15005-15024 | MS.gene25652:intron | 20.0% |
| !! | TATAAATTGGTTAATTAGCA+TGG | - | 51723:15273-15292 | None:intergenic | 20.0% |
| ! | AGAAGACATAAAAAAAGCTT+TGG | + | 51723:14829-14848 | MS.gene25652:CDS | 25.0% |
| ! | ATTCCTAATTTATCATTAGC+AGG | + | 51723:14794-14813 | MS.gene25652:CDS | 25.0% |
| ! | CAATTCATTAACAATGTTTC+TGG | - | 51723:15724-15743 | None:intergenic | 25.0% |
| ! | CAGAAACATTGTTAATGAAT+TGG | + | 51723:15722-15741 | MS.gene25652:CDS | 25.0% |
| ! | CCAATTTATATTAAGTAGCA+CGG | + | 51723:15283-15302 | MS.gene25652:intron | 25.0% |
| ! | TGCTAATGATAAATTAGGAA+TGG | - | 51723:14795-14814 | None:intergenic | 25.0% |
| ! | TTCAAGAAATTTGCATAAGT+TGG | - | 51723:15552-15571 | None:intergenic | 25.0% |
| !! | GTAATGAGTTGAGAAAATAT+AGG | + | 51723:15351-15370 | MS.gene25652:intron | 25.0% |
| !! | TGTTGGCTATATGTATTTAT+AGG | + | 51723:15435-15454 | MS.gene25652:intron | 25.0% |
| !!! | AGACTATATTTTAAGTAGCT+TGG | - | 51723:15247-15266 | None:intergenic | 25.0% |
| AAGCCTGCTAATGATAAATT+AGG | - | 51723:14800-14819 | None:intergenic | 30.0% | |
| GTTTGAATGGAGAAATTAGA+AGG | + | 51723:15817-15836 | MS.gene25652:CDS | 30.0% | |
| TCAAATGTTGTTGAGCTATT+TGG | - | 51723:15624-15643 | None:intergenic | 30.0% | |
| ! | AGACATAAAAAAAGCTTTGG+AGG | + | 51723:14832-14851 | MS.gene25652:CDS | 30.0% |
| !! | CCGTGCTACTTAATATAAAT+TGG | - | 51723:15286-15305 | None:intergenic | 30.0% |
| AAAGCTTACTCTTCATGACT+TGG | + | 51723:15140-15159 | MS.gene25652:CDS | 35.0% | |
| AGCTGTGTGATATTATGGAA+AGG | - | 51723:15099-15118 | None:intergenic | 35.0% | |
| ATTGCAACTTATTCAGCAAC+AGG | + | 51723:15481-15500 | MS.gene25652:CDS | 35.0% | |
| CCTGTACTTCTACAAAACAA+GGG | + | 51723:15657-15676 | MS.gene25652:CDS | 35.0% | |
| TCCTGTACTTCTACAAAACA+AGG | + | 51723:15656-15675 | MS.gene25652:CDS | 35.0% | |
| TTGTATATGACCACATGTGT+CGG | + | 51723:15377-15396 | MS.gene25652:intron | 35.0% | |
| ! | AGTTTTCTCAGTCAATGAAG+AGG | + | 51723:15769-15788 | MS.gene25652:CDS | 35.0% |
| ! | ATGTGCTGATATACTCACAT+TGG | + | 51723:14877-14896 | MS.gene25652:CDS | 35.0% |
| ! | CTTCATTGACTGAGAAAACT+CGG | - | 51723:15769-15788 | None:intergenic | 35.0% |
| ! | CTTTTCAACTTCACTGGAAA+AGG | + | 51723:15504-15523 | MS.gene25652:CDS | 35.0% |
| ! | TTTATAGGAGCACACACAAT+TGG | + | 51723:15450-15469 | MS.gene25652:intron | 35.0% |
| !! | AACAATGTTTCTGGATTGCT+TGG | - | 51723:15715-15734 | None:intergenic | 35.0% |
| !! | CATGACTTGGTTGTATTATC+AGG | + | 51723:15153-15172 | MS.gene25652:CDS | 35.0% |
| CACGGACATAGAACAAACAT+CGG | + | 51723:15301-15320 | MS.gene25652:intron | 40.0% | |
| GTCTGAGCTGTGTGATATTA+TGG | - | 51723:15104-15123 | None:intergenic | 40.0% | |
| TCAGCACATGATACAATTCC+TGG | - | 51723:14866-14885 | None:intergenic | 40.0% | |
| TCTCAGTCAATGAAGAGGAT+GGG | + | 51723:15774-15793 | MS.gene25652:CDS | 40.0% | |
| TTCTCAGTCAATGAAGAGGA+TGG | + | 51723:15773-15792 | MS.gene25652:CDS | 40.0% | |
| TTCTTGAAGACCAAATGCCA+AGG | + | 51723:15564-15583 | MS.gene25652:CDS | 40.0% | |
| TTTCTCCATTCAAACCAGTG+AGG | - | 51723:15812-15831 | None:intergenic | 40.0% | |
| ! | AACAGGCTTTTCAACTTCAC+TGG | + | 51723:15498-15517 | MS.gene25652:CDS | 40.0% |
| ! | GCATAAGTTGGATTCAGAGA+TGG | - | 51723:15540-15559 | None:intergenic | 40.0% |
| ! | GTGATATTATGGAAAGGTGC+TGG | - | 51723:15093-15112 | None:intergenic | 40.0% |
| !! | AAGGTGCTGGAATATTGATC+AGG | - | 51723:15080-15099 | None:intergenic | 40.0% |
| !! | ACCAAATTGGGAAGTGCTTA+CGG | + | 51723:15017-15036 | MS.gene25652:CDS | 40.0% |
| !! | AGGTGCTGGAATATTGATCA+GGG | - | 51723:15079-15098 | None:intergenic | 40.0% |
| !!! | CCCTTGTTTTGTAGAAGTAC+AGG | - | 51723:15660-15679 | None:intergenic | 40.0% |
| ATCCATCTCTACTGTTGTGG+TGG | - | 51723:15601-15620 | None:intergenic | 45.0% | |
| TGGATCCATCTCTACTGTTG+TGG | - | 51723:15604-15623 | None:intergenic | 45.0% | |
| !! | CCAAATTGGGAAGTGCTTAC+GGG | + | 51723:15018-15037 | MS.gene25652:CDS | 45.0% |
| !! | GCTTTGGAGGAAAAATGTCC+AGG | + | 51723:14845-14864 | MS.gene25652:CDS | 45.0% |
| !! | TAATGTAGCACCGACACATG+TGG | - | 51723:15390-15409 | None:intergenic | 45.0% |
| CACCACCACAACAGTAGAGA+TGG | + | 51723:15596-15615 | MS.gene25652:CDS | 50.0% | |
| CCCGTAAGCACTTCCCAATT+TGG | - | 51723:15021-15040 | None:intergenic | 50.0% | |
| GAAGAGGATGGGAGCTATTG+AGG | + | 51723:15785-15804 | MS.gene25652:CDS | 50.0% | |
| GGAGCACACACAATTGGAGT+AGG | + | 51723:15456-15475 | MS.gene25652:intron | 50.0% | |
| GTCACTTAGGCCTTGGCATT+TGG | - | 51723:15577-15596 | None:intergenic | 50.0% | |
| GTGCTTACGGGTAGAAGAGA+TGG | + | 51723:15030-15049 | MS.gene25652:CDS | 50.0% | |
| ! | ATTTCAGGGGTGTGACGCAT+CGG | + | 51723:14727-14746 | MS.gene25652:CDS | 50.0% |
| !! | CTGTTGTGGTGGTGTCACTT+AGG | - | 51723:15590-15609 | None:intergenic | 50.0% |
| !! | GAGGTCCTCACTGGTTTGAA+TGG | + | 51723:15804-15823 | MS.gene25652:CDS | 50.0% |
| !! | GTTTTGTTGGAGTCCACTGC+TGG | + | 51723:14749-14768 | MS.gene25652:CDS | 50.0% |
| !!! | GTGTGACGCATCGGTTTTGT+TGG | + | 51723:14736-14755 | MS.gene25652:CDS | 50.0% |
| GGAGCTATTGAGGTCCTCAC+TGG | + | 51723:15795-15814 | MS.gene25652:CDS | 55.0% | |
| GTCCACTGCTGGTAACACTG+CGG | + | 51723:14760-14779 | MS.gene25652:CDS | 55.0% | |
| TCGGACATGACATTGACGCG+TGG | + | 51723:15320-15339 | MS.gene25652:intron | 55.0% | |
| !! | TGGTGGTGTCACTTAGGCCT+TGG | - | 51723:15584-15603 | None:intergenic | 55.0% |
| CTCCGCAGTGTTACCAGCAG+TGG | - | 51723:14765-14784 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51723 | gene | 14719 | 15860 | 14719 | ID=MS.gene25652 |
| 51723 | mRNA | 14719 | 15860 | 14719 | ID=MS.gene25652.t1;Parent=MS.gene25652 |
| 51723 | exon | 14719 | 14913 | 14719 | ID=MS.gene25652.t1.exon1;Parent=MS.gene25652.t1 |
| 51723 | CDS | 14719 | 14913 | 14719 | ID=cds.MS.gene25652.t1;Parent=MS.gene25652.t1 |
| 51723 | exon | 15006 | 15174 | 15006 | ID=MS.gene25652.t1.exon2;Parent=MS.gene25652.t1 |
| 51723 | CDS | 15006 | 15174 | 15006 | ID=cds.MS.gene25652.t1;Parent=MS.gene25652.t1 |
| 51723 | exon | 15457 | 15860 | 15457 | ID=MS.gene25652.t1.exon3;Parent=MS.gene25652.t1 |
| 51723 | CDS | 15457 | 15860 | 15457 | ID=cds.MS.gene25652.t1;Parent=MS.gene25652.t1 |
| Gene Sequence |
| Protein sequence |
