Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29700.t1 | XP_003616703.1 | 93 | 516 | 5 | 1 | 1 | 485 | 1 | 516 | 4.80E-254 | 886.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29700.t1 | Q8L5Z7 | 64.2 | 489 | 126 | 4 | 43 | 483 | 96 | 583 | 1.7e-162 | 573.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29700.t1 | G7K781 | 93.0 | 516 | 5 | 1 | 1 | 485 | 1 | 516 | 3.5e-254 | 886.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04998 | MS.gene29700 | 0.810513 | 1.11E-50 | -1.69E-46 |
MS.gene050752 | MS.gene29700 | 0.814319 | 1.64E-51 | -1.69E-46 |
MS.gene050838 | MS.gene29700 | 0.851132 | 1.08E-60 | -1.69E-46 |
MS.gene050955 | MS.gene29700 | 0.806683 | 7.30E-50 | -1.69E-46 |
MS.gene051003 | MS.gene29700 | 0.817719 | 2.85E-52 | -1.69E-46 |
MS.gene051234 | MS.gene29700 | 0.81224 | 4.68E-51 | -1.69E-46 |
MS.gene051343 | MS.gene29700 | 0.803365 | 3.61E-49 | -1.69E-46 |
MS.gene051676 | MS.gene29700 | 0.819369 | 1.20E-52 | -1.69E-46 |
MS.gene051746 | MS.gene29700 | 0.805552 | 1.26E-49 | -1.69E-46 |
MS.gene051748 | MS.gene29700 | 0.808613 | 2.84E-50 | -1.69E-46 |
MS.gene051902 | MS.gene29700 | 0.831508 | 1.60E-55 | -1.69E-46 |
MS.gene051903 | MS.gene29700 | 0.818561 | 1.84E-52 | -1.69E-46 |
MS.gene052072 | MS.gene29700 | 0.80039 | 1.47E-48 | -1.69E-46 |
MS.gene052296 | MS.gene29700 | 0.844866 | 5.80E-59 | -1.69E-46 |
MS.gene052342 | MS.gene29700 | 0.808545 | 2.94E-50 | -1.69E-46 |
MS.gene052434 | MS.gene29700 | 0.810098 | 1.36E-50 | -1.69E-46 |
MS.gene052479 | MS.gene29700 | 0.825443 | 4.68E-54 | -1.69E-46 |
MS.gene052818 | MS.gene29700 | -0.836341 | 9.91E-57 | -1.69E-46 |
MS.gene053298 | MS.gene29700 | 0.80305 | 4.19E-49 | -1.69E-46 |
MS.gene053564 | MS.gene29700 | 0.823022 | 1.73E-53 | -1.69E-46 |
MS.gene053786 | MS.gene29700 | 0.804902 | 1.73E-49 | -1.69E-46 |
MS.gene054403 | MS.gene29700 | 0.814074 | 1.85E-51 | -1.69E-46 |
MS.gene05469 | MS.gene29700 | 0.803555 | 3.30E-49 | -1.69E-46 |
MS.gene056752 | MS.gene29700 | 0.810533 | 1.10E-50 | -1.69E-46 |
MS.gene057094 | MS.gene29700 | 0.812137 | 4.93E-51 | -1.69E-46 |
MS.gene057102 | MS.gene29700 | 0.810369 | 1.19E-50 | -1.69E-46 |
MS.gene057234 | MS.gene29700 | 0.813874 | 2.05E-51 | -1.69E-46 |
MS.gene057999 | MS.gene29700 | 0.825909 | 3.62E-54 | -1.69E-46 |
MS.gene058074 | MS.gene29700 | 0.866398 | 2.94E-65 | -1.69E-46 |
MS.gene058261 | MS.gene29700 | 0.824788 | 6.68E-54 | -1.69E-46 |
MS.gene059170 | MS.gene29700 | 0.803045 | 4.20E-49 | -1.69E-46 |
MS.gene059227 | MS.gene29700 | 0.805891 | 1.07E-49 | -1.69E-46 |
MS.gene06011 | MS.gene29700 | 0.85343 | 2.40E-61 | -1.69E-46 |
MS.gene060259 | MS.gene29700 | 0.837829 | 4.12E-57 | -1.69E-46 |
MS.gene060763 | MS.gene29700 | 0.81158 | 6.52E-51 | -1.69E-46 |
MS.gene061100 | MS.gene29700 | 0.800805 | 1.21E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29700.t1 | MTR_5g083370 | 93.023 | 516 | 5 | 1 | 1 | 485 | 1 | 516 | 0.0 | 971 |
MS.gene29700.t1 | MTR_5g073280 | 59.928 | 554 | 145 | 8 | 6 | 485 | 15 | 565 | 0.0 | 613 |
MS.gene29700.t1 | MTR_1g059650 | 25.917 | 409 | 252 | 11 | 79 | 482 | 41 | 403 | 1.52e-19 | 90.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29700.t1 | AT5G58440 | 64.865 | 481 | 120 | 4 | 48 | 480 | 101 | 580 | 0.0 | 625 |
MS.gene29700.t1 | AT5G07120 | 58.393 | 560 | 147 | 7 | 11 | 485 | 14 | 572 | 0.0 | 622 |
MS.gene29700.t1 | AT5G07120 | 58.393 | 560 | 147 | 7 | 11 | 485 | 14 | 572 | 0.0 | 622 |
MS.gene29700.t1 | AT5G07120 | 58.240 | 534 | 137 | 7 | 11 | 459 | 14 | 546 | 0.0 | 589 |
MS.gene29700.t1 | AT5G06140 | 25.167 | 449 | 265 | 13 | 31 | 473 | 9 | 392 | 7.47e-22 | 97.8 |
Find 132 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGAAGATAAGGAGTTTA+TGG | 0.131203 | 5.3:+67570453 | MS.gene29700:CDS |
TGGTGTAAGGAGGAGGTTTC+GGG | 0.165443 | 5.3:+67569585 | MS.gene29700:CDS |
GGCTGCCACGGCAGCTGTTT+GGG | 0.165894 | 5.3:+67570299 | MS.gene29700:CDS |
GAGAAGTATCTGAGGAAATT+AGG | 0.188004 | 5.3:+67570160 | MS.gene29700:CDS |
GTTGCTTCATCCAGAATATT+TGG | 0.216818 | 5.3:+67571829 | MS.gene29700:CDS |
AATGAATTGAACGGTGATTT+AGG | 0.226921 | 5.3:-67569328 | None:intergenic |
AGGCTGCCACGGCAGCTGTT+TGG | 0.229002 | 5.3:+67570298 | MS.gene29700:CDS |
CGGCGGTTGTTGAACGTTGC+CGG | 0.271445 | 5.3:-67569299 | None:intergenic |
AGCTGTTTGGGGCGGAGAGT+GGG | 0.297842 | 5.3:+67570311 | MS.gene29700:CDS |
CTTGTCTCCACCAAATATTC+TGG | 0.315427 | 5.3:-67571839 | None:intergenic |
CAGCTGTTTGGGGCGGAGAG+TGG | 0.335447 | 5.3:+67570310 | MS.gene29700:CDS |
AACAATCTGTTAGTAATGAT+TGG | 0.339972 | 5.3:+67570407 | MS.gene29700:CDS |
TACATTGTCGGAGCGGTTAT+CGG | 0.341514 | 5.3:+67569615 | MS.gene29700:CDS |
TTGGTGTAAGGAGGAGGTTT+CGG | 0.349103 | 5.3:+67569584 | MS.gene29700:CDS |
TATCTGATTACGACGAGAAC+TGG | 0.349647 | 5.3:+67569550 | MS.gene29700:CDS |
GTAACGAACTCGCTGGTTCC+AGG | 0.362396 | 5.3:+67569508 | MS.gene29700:CDS |
AGAAGTATCTGAGGAAATTA+GGG | 0.377649 | 5.3:+67570161 | MS.gene29700:CDS |
AAGGAGGAGGTTTCGGGAGG+TGG | 0.379579 | 5.3:+67569591 | MS.gene29700:CDS |
AAACTTTGCAGGAAAATAAT+AGG | 0.382071 | 5.3:+67573882 | MS.gene29700:intron |
TTATCGTGGTTATGTGATTC+CGG | 0.384264 | 5.3:+67569642 | MS.gene29700:CDS |
ACAATCTGTTAGTAATGATT+GGG | 0.384603 | 5.3:+67570408 | MS.gene29700:CDS |
AACTAGCTTCTTTACATTCA+CGG | 0.389779 | 5.3:+67571791 | MS.gene29700:CDS |
TTAGGGTTGCATCCTGTGAT+TGG | 0.408182 | 5.3:+67570178 | MS.gene29700:CDS |
GTGACTCCATTTCATCGTCT+TGG | 0.412162 | 5.3:-67569234 | None:intergenic |
GCGAGGGTTTGTTGTCAATC+AGG | 0.412246 | 5.3:+67573958 | MS.gene29700:CDS |
GGAGAAGAAGGATAAGTTGA+TGG | 0.424046 | 5.3:+67570474 | MS.gene29700:CDS |
TCGGGAGGTGGTTACATTGT+CGG | 0.424832 | 5.3:+67569603 | MS.gene29700:CDS |
TGACTCCATTTCATCGTCTT+GGG | 0.429228 | 5.3:-67569233 | None:intergenic |
GGAATTATCGCCGCCGTTGT+CGG | 0.430205 | 5.3:-67569275 | None:intergenic |
TAAGGAGTTTATGGAGAAGA+AGG | 0.434834 | 5.3:+67570462 | MS.gene29700:CDS |
CTCTCCACCGAACTCTTCTC+TGG | 0.440093 | 5.3:-67569670 | None:intergenic |
AGAACTGGAAAATCGGAGTT+TGG | 0.443673 | 5.3:+67569565 | MS.gene29700:CDS |
CGGAGTTTGGTGTAAGGAGG+AGG | 0.443749 | 5.3:+67569578 | MS.gene29700:CDS |
AACGGTGATTTAGGACTTTG+CGG | 0.447787 | 5.3:-67569319 | None:intergenic |
AATTCGAATCTCAAAGAGTA+AGG | 0.452607 | 5.3:+67571435 | MS.gene29700:CDS |
TACACAAACAATCAAACATC+TGG | 0.453598 | 5.3:+67571523 | MS.gene29700:CDS |
GATGCAGAAGGAGGAGTTTG+TGG | 0.457480 | 5.3:+67570117 | MS.gene29700:CDS |
TACGACGAGAACTGGAAAAT+CGG | 0.458964 | 5.3:+67569558 | MS.gene29700:CDS |
GGTGAAACAATGGGTGAGCT+AGG | 0.463965 | 5.3:+67571368 | MS.gene29700:CDS |
TGGCGTCAAGGATGCTTGAT+GGG | 0.464255 | 5.3:+67570269 | MS.gene29700:CDS |
AAAGTGGAAGGGATTTGCTT+AGG | 0.466015 | 5.3:+67570368 | MS.gene29700:CDS |
AAGCGCGAAGAACGTGATCT+TGG | 0.468626 | 5.3:-67569210 | None:intergenic |
GTGGCGTCAAGGATGCTTGA+TGG | 0.468981 | 5.3:+67570268 | MS.gene29700:CDS |
TAGGGTTGCATCCTGTGATT+GGG | 0.469279 | 5.3:+67570179 | MS.gene29700:CDS |
CGCTTCCCAAGACGATGAAA+TGG | 0.471624 | 5.3:+67569228 | MS.gene29700:CDS |
ATTGGTTGTTGAAGAAGATA+AGG | 0.471684 | 5.3:+67570444 | MS.gene29700:CDS |
GTCAGCAAAAGCATTGTTGA+TGG | 0.489842 | 5.3:-67571728 | None:intergenic |
GCTGCCACGGCAGCTGTTTG+GGG | 0.491006 | 5.3:+67570300 | MS.gene29700:CDS |
ACTTAGCAATGTTTCTCAGC+AGG | 0.492076 | 5.3:+67570510 | MS.gene29700:CDS |
GCTGTTTGGGGCGGAGAGTG+GGG | 0.492352 | 5.3:+67570312 | MS.gene29700:CDS |
TTATCTTCTTCAACAACCAA+TGG | 0.498912 | 5.3:-67570442 | None:intergenic |
TTTGAATGATGTGGCTCAGC+CGG | 0.506966 | 5.3:+67570342 | MS.gene29700:CDS |
GGAGCAGAGGAGATTAGCGT+TGG | 0.508817 | 5.3:+67570138 | MS.gene29700:CDS |
GGCAGGCTATGCAGAGAAGA+TGG | 0.512741 | 5.3:+67574081 | MS.gene29700:intron |
GAACTCTTCTCTGGCCTCAC+CGG | 0.519186 | 5.3:-67569661 | None:intergenic |
GCAAGACATGGGTGAAACAA+TGG | 0.520277 | 5.3:+67571358 | MS.gene29700:CDS |
GAAGAGTTCGGTGGAGAGGA+AGG | 0.521077 | 5.3:+67569675 | MS.gene29700:CDS |
CTGCAGCTGTCAAAGCAAGC+AGG | 0.522471 | 5.3:+67571483 | MS.gene29700:CDS |
CAAGACATGGGTGAAACAAT+GGG | 0.522777 | 5.3:+67571359 | MS.gene29700:CDS |
TCCTCACTCTTCCCAATCAC+AGG | 0.526809 | 5.3:-67570190 | None:intergenic |
TTGAAAGAATTGACAAGGAA+AGG | 0.529294 | 5.3:+67573912 | MS.gene29700:CDS |
GATAAACTCCACGAATACCT+TGG | 0.530791 | 5.3:+67571694 | MS.gene29700:CDS |
ATAAACTCCACGAATACCTT+GGG | 0.530869 | 5.3:+67571695 | MS.gene29700:CDS |
GTGGCTCAGCCGGCGAAAAG+TGG | 0.533089 | 5.3:+67570352 | MS.gene29700:CDS |
CTCAGCCGGCGAAAAGTGGA+AGG | 0.538183 | 5.3:+67570356 | MS.gene29700:CDS |
ATGGGGCGGTGAGGCTGCCA+CGG | 0.539166 | 5.3:+67570287 | MS.gene29700:CDS |
AAGATTGCTTCAGCGTAAGA+AGG | 0.540494 | 5.3:-67569361 | None:intergenic |
GGTTGTTGATTTGAATGATG+TGG | 0.541262 | 5.3:+67570333 | MS.gene29700:CDS |
GAAAATCGGAGTTTGGTGTA+AGG | 0.545372 | 5.3:+67569572 | MS.gene29700:CDS |
TAGAGAGTATGAACGAATCA+AGG | 0.545450 | 5.3:+67571933 | MS.gene29700:CDS |
TGTCAAGTTTCAGCAAGACA+TGG | 0.545641 | 5.3:+67571346 | MS.gene29700:CDS |
GTTGATGAGGACGACGGATG+TGG | 0.546141 | 5.3:+67570249 | MS.gene29700:CDS |
TCCGCCCCAAACAGCTGCCG+TGG | 0.549263 | 5.3:-67570304 | None:intergenic |
AACGGCGGCGATAATTCCTC+CGG | 0.554692 | 5.3:+67569280 | MS.gene29700:CDS |
AGGAGGAGTTTGTGGAGCAG+AGG | 0.558001 | 5.3:+67570125 | MS.gene29700:CDS |
CAGAGAAGAGTTCGGTGGAG+AGG | 0.558893 | 5.3:+67569671 | MS.gene29700:CDS |
GCATTGTCCCAAGGTATTCG+TGG | 0.559449 | 5.3:-67571702 | None:intergenic |
GTCAAGGATGCTTGATGGGG+CGG | 0.562029 | 5.3:+67570273 | MS.gene29700:CDS |
GCCACGGCAGCTGTTTGGGG+CGG | 0.564908 | 5.3:+67570303 | MS.gene29700:CDS |
CTGTCAACAATGCACTTGAT+CGG | 0.565466 | 5.3:-67571750 | None:intergenic |
CACGACGACGCCGACAACGG+CGG | 0.577601 | 5.3:+67569265 | MS.gene29700:CDS |
AGCACTCTCAGTTACTCTAA+CGG | 0.577710 | 5.3:-67571896 | None:intergenic |
GCTTCATCCAGAATATTTGG+TGG | 0.579181 | 5.3:+67571832 | MS.gene29700:CDS |
GGTGAGGCCAGAGAAGAGTT+CGG | 0.579558 | 5.3:+67569663 | MS.gene29700:CDS |
AAGGGAAGTTGCCGTTGATG+AGG | 0.580166 | 5.3:+67570236 | MS.gene29700:CDS |
AGAGAAGATGGCTGCTGTGT+GGG | 0.582156 | 5.3:+67574093 | MS.gene29700:CDS |
GTCAAGTTTCAGCAAGACAT+GGG | 0.591750 | 5.3:+67571347 | MS.gene29700:CDS |
CGCCGTTGTCGGCGTCGTCG+TGG | 0.591851 | 5.3:-67569264 | None:intergenic |
AATCGGAGTTTGGTGTAAGG+AGG | 0.592363 | 5.3:+67569575 | MS.gene29700:CDS |
AACAATGGGTGAGCTAGGGT+TGG | 0.592568 | 5.3:+67571373 | MS.gene29700:CDS |
ATTGTCGGAGCGGTTATCGG+AGG | 0.593370 | 5.3:+67569618 | MS.gene29700:CDS |
TTGGGGAGGTGCTAAGCCAT+TGG | 0.595216 | 5.3:+67570426 | MS.gene29700:CDS |
TGCTGTGTGGGAAAAGCTTG+CGG | 0.596149 | 5.3:+67574105 | MS.gene29700:CDS |
ACTTTCAAAACATGCTGCGA+GGG | 0.598205 | 5.3:+67573942 | MS.gene29700:CDS |
TTCACTTCATTCGACACCAA+CGG | 0.599087 | 5.3:+67569382 | MS.gene29700:CDS |
TATTTGGTGGAGACAAGTCT+AGG | 0.601151 | 5.3:+67571845 | MS.gene29700:CDS |
TGTAAGGAGGAGGTTTCGGG+AGG | 0.601303 | 5.3:+67569588 | MS.gene29700:CDS |
GGATGCTTGATGGGGCGGTG+AGG | 0.604410 | 5.3:+67570278 | MS.gene29700:CDS |
CGGTTGTTGAACGTTGCCGG+AGG | 0.608629 | 5.3:-67569296 | None:intergenic |
CTCCACGACGACGCCGACAA+CGG | 0.609403 | 5.3:+67569262 | MS.gene29700:CDS |
GGCGTCAAGGATGCTTGATG+GGG | 0.610367 | 5.3:+67570270 | MS.gene29700:CDS |
ACATCCGTCGTCCTCATCAA+CGG | 0.610443 | 5.3:-67570247 | None:intergenic |
ATTCGAATCTCAAAGAGTAA+GGG | 0.612875 | 5.3:+67571436 | MS.gene29700:CDS |
CGGTTATCGGAGGTTTATCG+TGG | 0.619246 | 5.3:+67569628 | MS.gene29700:CDS |
GGACGACGGATGTGGCGTCA+AGG | 0.620316 | 5.3:+67570257 | MS.gene29700:CDS |
GTGAAACAATGGGTGAGCTA+GGG | 0.620469 | 5.3:+67571369 | MS.gene29700:CDS |
GACTTTCAAAACATGCTGCG+AGG | 0.622052 | 5.3:+67573941 | MS.gene29700:CDS |
GTATGATAACTACTTCCACC+TGG | 0.623384 | 5.3:-67569526 | None:intergenic |
GCAAGAGGTAACGAACTCGC+TGG | 0.627266 | 5.3:+67569501 | MS.gene29700:CDS |
TGATCCTCAAGAGGAGCAAG+AGG | 0.633181 | 5.3:+67569486 | MS.gene29700:intron |
CTATCAGGTGATGCAGAAGG+AGG | 0.634617 | 5.3:+67570108 | MS.gene29700:intron |
ATTCTATCAGGTGATGCAGA+AGG | 0.635217 | 5.3:+67570105 | MS.gene29700:intron |
TGTCTTGCTGAAACTTGACA+AGG | 0.636299 | 5.3:-67571343 | None:intergenic |
GAGGCCAGAGAAGAGTTCGG+TGG | 0.640891 | 5.3:+67569666 | MS.gene29700:CDS |
GTCTTGCTGAAACTTGACAA+GGG | 0.646463 | 5.3:-67571342 | None:intergenic |
CAATCTGTTAGTAATGATTG+GGG | 0.646740 | 5.3:+67570409 | MS.gene29700:CDS |
CGTTGTCGGCGTCGTCGTGG+AGG | 0.648470 | 5.3:-67569261 | None:intergenic |
GGATCGAGGAATGAATTGAA+CGG | 0.649991 | 5.3:-67569337 | None:intergenic |
TCAGCCGGCGAAAAGTGGAA+GGG | 0.652000 | 5.3:+67570357 | MS.gene29700:CDS |
ATTGCTTCAGCGTAAGAAGG+AGG | 0.654082 | 5.3:-67569358 | None:intergenic |
TGATGGCTAGCATTGTCCCA+AGG | 0.654220 | 5.3:-67571711 | None:intergenic |
TGAGCTTGAAAGAATTGACA+AGG | 0.655714 | 5.3:+67573907 | MS.gene29700:CDS |
CAGCGTAAGAAGGAGGATCG+AGG | 0.672129 | 5.3:-67569351 | None:intergenic |
TAGCGTTGGAGAAGTATCTG+AGG | 0.672262 | 5.3:+67570152 | MS.gene29700:CDS |
CAGAGAAGATGGCTGCTGTG+TGG | 0.678220 | 5.3:+67574092 | MS.gene29700:CDS |
AGGTGGTTACATTGTCGGAG+CGG | 0.698989 | 5.3:+67569608 | MS.gene29700:CDS |
TCTGTTAGTAATGATTGGGG+AGG | 0.700339 | 5.3:+67570412 | MS.gene29700:CDS |
ACGAACTCGCTGGTTCCAGG+TGG | 0.701801 | 5.3:+67569511 | MS.gene29700:CDS |
GTGGTTATGTGATTCCGGTG+AGG | 0.703172 | 5.3:+67569647 | MS.gene29700:CDS |
TCCTGTGATTGGGAAGAGTG+AGG | 0.720504 | 5.3:+67570189 | MS.gene29700:CDS |
GTTGCCGTTGATGAGGACGA+CGG | 0.733554 | 5.3:+67570243 | MS.gene29700:CDS |
GGTGATTTAGGACTTTGCGG+CGG | 0.746382 | 5.3:-67569316 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTGTTAATTACAATAAA+TGG | - | chr5.3:67570023-67570042 | None:intergenic | 10.0% |
!! | ATTTACATATTATTTCAAAA+AGG | - | chr5.3:67573842-67573861 | None:intergenic | 10.0% |
!!! | AAAAAGAAAAAATAGTTTTA+AGG | + | chr5.3:67573799-67573818 | MS.gene29700:intron | 10.0% |
!!! | AAAAATACATTTTTTGTATT+CGG | + | chr5.3:67571962-67571981 | MS.gene29700:intron | 10.0% |
!! | TCATCATACAATTATATAAT+TGG | - | chr5.3:67571594-67571613 | None:intergenic | 15.0% |
!!! | ATAGAAATACAGATTTTAAA+TGG | - | chr5.3:67573775-67573794 | None:intergenic | 15.0% |
!! | AATAATATCAAGTGTAAATG+TGG | + | chr5.3:67573859-67573878 | MS.gene29700:intron | 20.0% |
!! | ACTAAACATGATATAATAGT+CGG | + | chr5.3:67571118-67571137 | MS.gene29700:intron | 20.0% |
!! | CAAAATATTGATATTAAGCA+CGG | - | chr5.3:67570082-67570101 | None:intergenic | 20.0% |
!! | GACAATAATCTTCATAATAA+TGG | - | chr5.3:67572138-67572157 | None:intergenic | 20.0% |
!! | TATAGACACATGAATATATA+TGG | - | chr5.3:67572111-67572130 | None:intergenic | 20.0% |
!! | TATCTTAATTGCAAATTAGT+CGG | + | chr5.3:67569715-67569734 | MS.gene29700:intron | 20.0% |
!! | TTAATTACAATAAATGGTGT+CGG | - | chr5.3:67570017-67570036 | None:intergenic | 20.0% |
!! | TTATCAAAATCATCAAATAG+TGG | + | chr5.3:67572752-67572771 | MS.gene29700:intron | 20.0% |
!! | TTTACAAATGCATCAAAATA+TGG | - | chr5.3:67572491-67572510 | None:intergenic | 20.0% |
!!! | AATATTTTGCATATTCTATC+AGG | + | chr5.3:67570093-67570112 | MS.gene29700:intron | 20.0% |
!!! | AATCATTGGATTTTACATAT+AGG | - | chr5.3:67572612-67572631 | None:intergenic | 20.0% |
!!! | ACAAGATTTTAAATGATCAT+TGG | - | chr5.3:67571029-67571048 | None:intergenic | 20.0% |
!!! | ATCATTTAAAATCTTGTTTG+TGG | + | chr5.3:67571032-67571051 | MS.gene29700:intron | 20.0% |
!!! | ATTCTGGTTTTTTAAATCAT+TGG | - | chr5.3:67572626-67572645 | None:intergenic | 20.0% |
!!! | ATTTTACTTCTTTGATTGTT+AGG | + | chr5.3:67571274-67571293 | MS.gene29700:intron | 20.0% |
!!! | GTAGAATCAATTATCAATTT+TGG | + | chr5.3:67569926-67569945 | MS.gene29700:intron | 20.0% |
!!! | TCTTTGATAATCTAATTAGA+TGG | - | chr5.3:67572318-67572337 | None:intergenic | 20.0% |
!!! | TTTTACTTCTTTGATTGTTA+GGG | + | chr5.3:67571275-67571294 | MS.gene29700:intron | 20.0% |
!!! | TTTTATACTTGTTATGTACT+TGG | - | chr5.3:67572951-67572970 | None:intergenic | 20.0% |
! | AAACTTTGCAGGAAAATAAT+AGG | + | chr5.3:67573882-67573901 | MS.gene29700:intron | 25.0% |
! | AAATCATAAGATAGGTTCAA+AGG | - | chr5.3:67573663-67573682 | None:intergenic | 25.0% |
! | AACAATCTGTTAGTAATGAT+TGG | + | chr5.3:67570407-67570426 | MS.gene29700:CDS | 25.0% |
! | ACAATCTGTTAGTAATGATT+GGG | + | chr5.3:67570408-67570427 | MS.gene29700:CDS | 25.0% |
! | AGTAAAATGTAGATTCATTG+TGG | + | chr5.3:67570603-67570622 | MS.gene29700:intron | 25.0% |
! | ATGTGATGTTAGTTAAAAGT+AGG | + | chr5.3:67570783-67570802 | MS.gene29700:intron | 25.0% |
! | CCTTTATAGATGGATAAAAA+GGG | - | chr5.3:67573374-67573393 | None:intergenic | 25.0% |
! | CTCAATGATCAATAAAACAT+AGG | - | chr5.3:67572841-67572860 | None:intergenic | 25.0% |
! | CTTTATAGATGGATAAAAAG+GGG | - | chr5.3:67573373-67573392 | None:intergenic | 25.0% |
! | GCTTTCATAAATCATAAGAT+AGG | - | chr5.3:67573671-67573690 | None:intergenic | 25.0% |
! | TAAACAAAATCAGATATCAG+AGG | - | chr5.3:67570563-67570582 | None:intergenic | 25.0% |
! | TAGATATGCCTAAAATGATT+AGG | + | chr5.3:67573310-67573329 | MS.gene29700:intron | 25.0% |
! | TCAAAAATCAAAATCGCTAA+AGG | - | chr5.3:67573586-67573605 | None:intergenic | 25.0% |
! | TGATGCATTTAATTCAAAGT+AGG | + | chr5.3:67570694-67570713 | MS.gene29700:intron | 25.0% |
! | TGTGTCAAATTATCAAATAG+TGG | - | chr5.3:67572218-67572237 | None:intergenic | 25.0% |
!! | TAATATTTTATGTGTGTTGC+AGG | + | chr5.3:67571672-67571691 | MS.gene29700:intron | 25.0% |
!! | TAGGATTTTACATAATGAGA+TGG | - | chr5.3:67572822-67572841 | None:intergenic | 25.0% |
!!! | TCTGATTTTGTTTACGAAAA+AGG | + | chr5.3:67570569-67570588 | MS.gene29700:intron | 25.0% |
!!! | TTTTAACTAACATCACATTG+CGG | - | chr5.3:67570781-67570800 | None:intergenic | 25.0% |
AAAGGTTCATAACCACAATA+TGG | + | chr5.3:67570738-67570757 | MS.gene29700:intron | 30.0% | |
AACTAATCCAAGTGTATGTT+TGG | - | chr5.3:67569969-67569988 | None:intergenic | 30.0% | |
AAGAAAAGAGAAGATAAACG+AGG | - | chr5.3:67573988-67574007 | None:intergenic | 30.0% | |
AAGGTTCATAACCACAATAT+GGG | + | chr5.3:67570739-67570758 | MS.gene29700:intron | 30.0% | |
AAGTTCAAGTGATTCATGTT+TGG | + | chr5.3:67569819-67569838 | MS.gene29700:intron | 30.0% | |
AATCTGAATCGAATCGAATT+CGG | - | chr5.3:67569458-67569477 | None:intergenic | 30.0% | |
AATGAATTGAACGGTGATTT+AGG | - | chr5.3:67569331-67569350 | None:intergenic | 30.0% | |
AATTCGAATCTCAAAGAGTA+AGG | + | chr5.3:67571435-67571454 | MS.gene29700:CDS | 30.0% | |
AATTGCATTGCATTATAGAG+AGG | - | chr5.3:67572412-67572431 | None:intergenic | 30.0% | |
ACAATTCACTAATCCAATCA+GGG | + | chr5.3:67572879-67572898 | MS.gene29700:intron | 30.0% | |
AGAAAAGAGAAGATAAACGA+GGG | - | chr5.3:67573987-67574006 | None:intergenic | 30.0% | |
AGACAGCTAAAGATTATACT+TGG | - | chr5.3:67571634-67571653 | None:intergenic | 30.0% | |
AGTGCTTAAAATTTCAACAC+AGG | + | chr5.3:67572996-67573015 | MS.gene29700:intron | 30.0% | |
ATCCAAGGTATAACTTAACA+TGG | + | chr5.3:67573064-67573083 | MS.gene29700:intron | 30.0% | |
ATCCATGTTAAGTTATACCT+TGG | - | chr5.3:67573069-67573088 | None:intergenic | 30.0% | |
ATGTTGATATGTATGCTGAA+GGG | - | chr5.3:67572050-67572069 | None:intergenic | 30.0% | |
ATTCGAATCTCAAAGAGTAA+GGG | + | chr5.3:67571436-67571455 | MS.gene29700:CDS | 30.0% | |
ATTGGTTGTTGAAGAAGATA+AGG | + | chr5.3:67570444-67570463 | MS.gene29700:CDS | 30.0% | |
CAATCTGTTAGTAATGATTG+GGG | + | chr5.3:67570409-67570428 | MS.gene29700:CDS | 30.0% | |
CATAACAAGTTCAAACTGAT+GGG | - | chr5.3:67573623-67573642 | None:intergenic | 30.0% | |
GCCTTTATAGATGGATAAAA+AGG | - | chr5.3:67573375-67573394 | None:intergenic | 30.0% | |
GTCTTTATAGACAAGTTTCA+TGG | + | chr5.3:67572432-67572451 | MS.gene29700:intron | 30.0% | |
TACAATTCACTAATCCAATC+AGG | + | chr5.3:67572878-67572897 | MS.gene29700:intron | 30.0% | |
TACACAAACAATCAAACATC+TGG | + | chr5.3:67571523-67571542 | MS.gene29700:CDS | 30.0% | |
TACCAGTCAAATTTATACCA+GGG | - | chr5.3:67572362-67572381 | None:intergenic | 30.0% | |
TATGTTGATATGTATGCTGA+AGG | - | chr5.3:67572051-67572070 | None:intergenic | 30.0% | |
TCATCAATCAATAGCTGATT+TGG | + | chr5.3:67572549-67572568 | MS.gene29700:intron | 30.0% | |
TGAAGAAGATAAGGAGTTTA+TGG | + | chr5.3:67570453-67570472 | MS.gene29700:CDS | 30.0% | |
TGCAAGCATACAATATAAGT+TGG | + | chr5.3:67572909-67572928 | MS.gene29700:intron | 30.0% | |
TTATCAAATAGTGGTAGATC+TGG | - | chr5.3:67572209-67572228 | None:intergenic | 30.0% | |
TTATCTTCTTCAACAACCAA+TGG | - | chr5.3:67570445-67570464 | None:intergenic | 30.0% | |
TTGAAAGAATTGACAAGGAA+AGG | + | chr5.3:67573912-67573931 | MS.gene29700:CDS | 30.0% | |
TTGTGGTGTAATCAAGTATT+AGG | + | chr5.3:67571049-67571068 | MS.gene29700:intron | 30.0% | |
! | AACTAGCTTCTTTACATTCA+CGG | + | chr5.3:67571791-67571810 | MS.gene29700:CDS | 30.0% |
! | ATGGTAATGCAATTCTTCAA+AGG | - | chr5.3:67571208-67571227 | None:intergenic | 30.0% |
! | CCCTTTTTATCCATCTATAA+AGG | + | chr5.3:67573371-67573390 | MS.gene29700:intron | 30.0% |
! | CTACAAAGCCTAATCATTTT+AGG | - | chr5.3:67573321-67573340 | None:intergenic | 30.0% |
! | GTTTATCTTCTCTTTTCTTC+AGG | + | chr5.3:67573989-67574008 | MS.gene29700:intron | 30.0% |
! | TCAAAGTAGGTTTGAAGTTA+GGG | + | chr5.3:67570707-67570726 | MS.gene29700:intron | 30.0% |
! | TGGAACTGAATGAATTGTTT+TGG | + | chr5.3:67571239-67571258 | MS.gene29700:intron | 30.0% |
! | TTCAAAGTAGGTTTGAAGTT+AGG | + | chr5.3:67570706-67570725 | MS.gene29700:intron | 30.0% |
!! | AGAAGTATCTGAGGAAATTA+GGG | + | chr5.3:67570161-67570180 | MS.gene29700:CDS | 30.0% |
!! | AGTTTGAGACTTCATTTTGT+TGG | - | chr5.3:67573437-67573456 | None:intergenic | 30.0% |
!! | ATACAATATAAGTTGGTGAG+CGG | + | chr5.3:67572916-67572935 | MS.gene29700:intron | 30.0% |
!! | ATACTTGTTATGTACTTGGT+TGG | - | chr5.3:67572947-67572966 | None:intergenic | 30.0% |
!! | ATGAGTCTTTAACTTGATTG+TGG | + | chr5.3:67573276-67573295 | MS.gene29700:intron | 30.0% |
!! | GTTTGAGACTTCATTTTGTT+GGG | - | chr5.3:67573436-67573455 | None:intergenic | 30.0% |
!! | TCTAGTGTCATTGTGTTTTA+TGG | + | chr5.3:67571162-67571181 | MS.gene29700:intron | 30.0% |
!!! | CATATTTTTGCTTTTAGAGC+TGG | + | chr5.3:67572067-67572086 | MS.gene29700:intron | 30.0% |
!!! | CTGAATGAATTGTTTTGGAA+TGG | + | chr5.3:67571244-67571263 | MS.gene29700:intron | 30.0% |
!!! | GAAGTTAGGGTTTTAGAAAA+AGG | + | chr5.3:67570720-67570739 | MS.gene29700:intron | 30.0% |
AAAAAAGAATTGCGTCTGCA+TGG | + | chr5.3:67570926-67570945 | MS.gene29700:intron | 35.0% | |
AACTTGACTTCTAAATCTGC+TGG | + | chr5.3:67572583-67572602 | MS.gene29700:intron | 35.0% | |
AATCGAAGTTACAGATGCTA+AGG | - | chr5.3:67571999-67572018 | None:intergenic | 35.0% | |
AATGGAACCAAACATACACT+TGG | + | chr5.3:67569959-67569978 | MS.gene29700:intron | 35.0% | |
ACTTATCCATAAGGTTATGC+AGG | - | chr5.3:67572288-67572307 | None:intergenic | 35.0% | |
ACTTGAATAGAATGCGAGTT+TGG | + | chr5.3:67573243-67573262 | MS.gene29700:intron | 35.0% | |
AGAAAACACAGACATAACCA+TGG | + | chr5.3:67573459-67573478 | MS.gene29700:intron | 35.0% | |
ATAAACTCCACGAATACCTT+GGG | + | chr5.3:67571695-67571714 | MS.gene29700:CDS | 35.0% | |
ATCGAAGTTACAGATGCTAA+GGG | - | chr5.3:67571998-67572017 | None:intergenic | 35.0% | |
ATGAATCAAATGGCAATGAG+GGG | + | chr5.3:67573531-67573550 | MS.gene29700:intron | 35.0% | |
ATTCAGATATGACCCAAGTA+TGG | - | chr5.3:67570984-67571003 | None:intergenic | 35.0% | |
CAATAACCTGCATAACCTTA+TGG | + | chr5.3:67572279-67572298 | MS.gene29700:intron | 35.0% | |
CAGCTAAAGATTATACTTGG+AGG | - | chr5.3:67571631-67571650 | None:intergenic | 35.0% | |
CATAACAAGTATAAAAGCCG+AGG | + | chr5.3:67572955-67572974 | MS.gene29700:intron | 35.0% | |
CCAAATCAGCTATTACATTC+TGG | - | chr5.3:67572642-67572661 | None:intergenic | 35.0% | |
CCAGAATGTAATAGCTGATT+TGG | + | chr5.3:67572639-67572658 | MS.gene29700:intron | 35.0% | |
CGCATTCTATTCAAGTCTAT+AGG | - | chr5.3:67573239-67573258 | None:intergenic | 35.0% | |
CTACCAGTCAAATTTATACC+AGG | - | chr5.3:67572363-67572382 | None:intergenic | 35.0% | |
CTTGAATAGAATGCGAGTTT+GGG | + | chr5.3:67573244-67573263 | MS.gene29700:intron | 35.0% | |
GAGATATCAAACCCATATTG+TGG | - | chr5.3:67570753-67570772 | None:intergenic | 35.0% | |
GATGAATCAAATGGCAATGA+GGG | + | chr5.3:67573530-67573549 | MS.gene29700:intron | 35.0% | |
GCATAACAAGTTCAAACTGA+TGG | - | chr5.3:67573624-67573643 | None:intergenic | 35.0% | |
GTTAAAAGTAGGACTCATTG+TGG | + | chr5.3:67570794-67570813 | MS.gene29700:intron | 35.0% | |
GTTGCTTCATCCAGAATATT+TGG | + | chr5.3:67571829-67571848 | MS.gene29700:CDS | 35.0% | |
TAAGGAGTTTATGGAGAAGA+AGG | + | chr5.3:67570462-67570481 | MS.gene29700:CDS | 35.0% | |
TCAACTAGACGAAAGAGAAA+AGG | - | chr5.3:67571090-67571109 | None:intergenic | 35.0% | |
TCATCAAATAGTGGTAGATC+TGG | + | chr5.3:67572761-67572780 | MS.gene29700:intron | 35.0% | |
TCCTAACCTCAAATTAACTG+TGG | - | chr5.3:67570901-67570920 | None:intergenic | 35.0% | |
TGAGCTTGAAAGAATTGACA+AGG | + | chr5.3:67573907-67573926 | MS.gene29700:CDS | 35.0% | |
TGATGAATCAAATGGCAATG+AGG | + | chr5.3:67573529-67573548 | MS.gene29700:intron | 35.0% | |
TGTAAATGTGGAAACTTTGC+AGG | + | chr5.3:67573871-67573890 | MS.gene29700:intron | 35.0% | |
TGTTGATATGTATGCTGAAG+GGG | - | chr5.3:67572049-67572068 | None:intergenic | 35.0% | |
TTATCGTGGTTATGTGATTC+CGG | + | chr5.3:67569642-67569661 | MS.gene29700:CDS | 35.0% | |
TTGAATAGAATGCGAGTTTG+GGG | + | chr5.3:67573245-67573264 | MS.gene29700:intron | 35.0% | |
! | AATTGATTCTACTCGAAGCT+AGG | - | chr5.3:67569918-67569937 | None:intergenic | 35.0% |
! | ATGTTTGGTTCCATTTCTAG+AGG | - | chr5.3:67569954-67569973 | None:intergenic | 35.0% |
! | TAGAGAGTATGAACGAATCA+AGG | + | chr5.3:67571933-67571952 | MS.gene29700:CDS | 35.0% |
! | TCCACAGTTAATTTGAGGTT+AGG | + | chr5.3:67570897-67570916 | MS.gene29700:intron | 35.0% |
! | TGTTTGGTTCCATTTCTAGA+GGG | - | chr5.3:67569953-67569972 | None:intergenic | 35.0% |
! | TTAGCTCCACAGTTAATTTG+AGG | + | chr5.3:67570892-67570911 | MS.gene29700:intron | 35.0% |
! | TTCATTTTGTTGGGAGCTAT+GGG | - | chr5.3:67573427-67573446 | None:intergenic | 35.0% |
!! | GAGAAGTATCTGAGGAAATT+AGG | + | chr5.3:67570160-67570179 | MS.gene29700:CDS | 35.0% |
!! | GGATTTGCTTAGGATTTTCA+AGG | + | chr5.3:67570378-67570397 | MS.gene29700:CDS | 35.0% |
!! | GGTTGTTGATTTGAATGATG+TGG | + | chr5.3:67570333-67570352 | MS.gene29700:CDS | 35.0% |
!!! | ATGCAGACGCAATTCTTTTT+TGG | - | chr5.3:67570927-67570946 | None:intergenic | 35.0% |
!!! | CATTACCATTTTTTGTCACG+TGG | + | chr5.3:67571219-67571238 | MS.gene29700:intron | 35.0% |
AAGATTGCTTCAGCGTAAGA+AGG | - | chr5.3:67569364-67569383 | None:intergenic | 40.0% | |
ACCATACATGAGATAGTGAG+TGG | + | chr5.3:67573038-67573057 | MS.gene29700:intron | 40.0% | |
ACTAATCCAATCAGGGTTGA+TGG | + | chr5.3:67572886-67572905 | MS.gene29700:intron | 40.0% | |
ACTGCAATGTGACCATACTT+GGG | + | chr5.3:67570969-67570988 | MS.gene29700:intron | 40.0% | |
ACTTAGCAATGTTTCTCAGC+AGG | + | chr5.3:67570510-67570529 | MS.gene29700:CDS | 40.0% | |
ACTTCCTAACATGCACTAAG+AGG | - | chr5.3:67570653-67570672 | None:intergenic | 40.0% | |
ACTTTCAAAACATGCTGCGA+GGG | + | chr5.3:67573942-67573961 | MS.gene29700:CDS | 40.0% | |
AGAACTGGAAAATCGGAGTT+TGG | + | chr5.3:67569565-67569584 | MS.gene29700:CDS | 40.0% | |
AGCAACACGATAGTTATCCT+CGG | - | chr5.3:67572975-67572994 | None:intergenic | 40.0% | |
AGCACTCTCAGTTACTCTAA+CGG | - | chr5.3:67571899-67571918 | None:intergenic | 40.0% | |
ATCTGACCATCTCATATCCA+TGG | + | chr5.3:67573109-67573128 | MS.gene29700:intron | 40.0% | |
ATGGATATGAGATGGTCAGA+TGG | - | chr5.3:67573110-67573129 | None:intergenic | 40.0% | |
ATTCTATCAGGTGATGCAGA+AGG | + | chr5.3:67570105-67570124 | MS.gene29700:intron | 40.0% | |
ATTTCCAAACCCACACTAAG+AGG | - | chr5.3:67570844-67570863 | None:intergenic | 40.0% | |
CAAAAAGGACTTCAGTGCAT+TGG | - | chr5.3:67573827-67573846 | None:intergenic | 40.0% | |
CAAAATCGCTAAAGGCCAAA+GGG | - | chr5.3:67573578-67573597 | None:intergenic | 40.0% | |
CAACTTCAAATTGTGATGCC+AGG | + | chr5.3:67573697-67573716 | MS.gene29700:intron | 40.0% | |
CAAGACATGGGTGAAACAAT+GGG | + | chr5.3:67571359-67571378 | MS.gene29700:CDS | 40.0% | |
CACCCTGGTATAAATTTGAC+TGG | + | chr5.3:67572357-67572376 | MS.gene29700:intron | 40.0% | |
CAGTTCCACGTGACAAAAAA+TGG | - | chr5.3:67571227-67571246 | None:intergenic | 40.0% | |
CATCCAGCTGATGAATCAAA+TGG | + | chr5.3:67573521-67573540 | MS.gene29700:intron | 40.0% | |
CATTTGATTCATCAGCTGGA+TGG | - | chr5.3:67573523-67573542 | None:intergenic | 40.0% | |
CTAGAAAACTCGAATCAAGC+CGG | + | chr5.3:67569418-67569437 | MS.gene29700:intron | 40.0% | |
CTAGACGAAAGAGAAAAGGT+TGG | - | chr5.3:67571086-67571105 | None:intergenic | 40.0% | |
CTGTCAACAATGCACTTGAT+CGG | - | chr5.3:67571753-67571772 | None:intergenic | 40.0% | |
CTTGTCTCCACCAAATATTC+TGG | - | chr5.3:67571842-67571861 | None:intergenic | 40.0% | |
GATAAACTCCACGAATACCT+TGG | + | chr5.3:67571694-67571713 | MS.gene29700:CDS | 40.0% | |
GATCAGAACTAGAAATAGCC+AGG | - | chr5.3:67574026-67574045 | None:intergenic | 40.0% | |
GCTTCATCCAGAATATTTGG+TGG | + | chr5.3:67571832-67571851 | MS.gene29700:CDS | 40.0% | |
GGATCGAGGAATGAATTGAA+CGG | - | chr5.3:67569340-67569359 | None:intergenic | 40.0% | |
GGGAATGTTAGATGCATCTA+TGG | - | chr5.3:67573353-67573372 | None:intergenic | 40.0% | |
GTATGATAACTACTTCCACC+TGG | - | chr5.3:67569529-67569548 | None:intergenic | 40.0% | |
GTCAAGTTTCAGCAAGACAT+GGG | + | chr5.3:67571347-67571366 | MS.gene29700:CDS | 40.0% | |
GTCTTGCTGAAACTTGACAA+GGG | - | chr5.3:67571345-67571364 | None:intergenic | 40.0% | |
TACGACGAGAACTGGAAAAT+CGG | + | chr5.3:67569558-67569577 | MS.gene29700:CDS | 40.0% | |
TATCTGATTACGACGAGAAC+TGG | + | chr5.3:67569550-67569569 | MS.gene29700:CDS | 40.0% | |
TCAAAATCGCTAAAGGCCAA+AGG | - | chr5.3:67573579-67573598 | None:intergenic | 40.0% | |
TCAAGTCTATAGGAGTCTAC+TGG | - | chr5.3:67573229-67573248 | None:intergenic | 40.0% | |
TCCACTCACTATCTCATGTA+TGG | - | chr5.3:67573042-67573061 | None:intergenic | 40.0% | |
TCTGTTAGTAATGATTGGGG+AGG | + | chr5.3:67570412-67570431 | MS.gene29700:CDS | 40.0% | |
TGACTCCATTTCATCGTCTT+GGG | - | chr5.3:67569236-67569255 | None:intergenic | 40.0% | |
TGTCAAGTTTCAGCAAGACA+TGG | + | chr5.3:67571346-67571365 | MS.gene29700:CDS | 40.0% | |
TGTCTTGCTGAAACTTGACA+AGG | - | chr5.3:67571346-67571365 | None:intergenic | 40.0% | |
TGTTCCATTGAGAGCTTCAT+TGG | + | chr5.3:67572723-67572742 | MS.gene29700:intron | 40.0% | |
TTCAAATTGTGATGCCAGGT+TGG | + | chr5.3:67573701-67573720 | MS.gene29700:intron | 40.0% | |
TTCACTTCATTCGACACCAA+CGG | + | chr5.3:67569382-67569401 | MS.gene29700:CDS | 40.0% | |
! | AAAGTGGAAGGGATTTGCTT+AGG | + | chr5.3:67570368-67570387 | MS.gene29700:CDS | 40.0% |
! | AACGGTGATTTAGGACTTTG+CGG | - | chr5.3:67569322-67569341 | None:intergenic | 40.0% |
! | AACTGATGGGCAAAATCACA+AGG | - | chr5.3:67573610-67573629 | None:intergenic | 40.0% |
! | AAGGGGAAGCACAAATTTAC+AGG | - | chr5.3:67572032-67572051 | None:intergenic | 40.0% |
! | CATCTGCATTTACTTGTTGC+AGG | + | chr5.3:67571313-67571332 | MS.gene29700:intron | 40.0% |
! | CTCTACATCACGTGTTTTAC+AGG | + | chr5.3:67574060-67574079 | MS.gene29700:intron | 40.0% |
! | CTTCATTTTGTTGGGAGCTA+TGG | - | chr5.3:67573428-67573447 | None:intergenic | 40.0% |
! | GGAGAAGAAGGATAAGTTGA+TGG | + | chr5.3:67570474-67570493 | MS.gene29700:CDS | 40.0% |
! | GTTTGGTTCCATTTCTAGAG+GGG | - | chr5.3:67569952-67569971 | None:intergenic | 40.0% |
! | TATTTGGTGGAGACAAGTCT+AGG | + | chr5.3:67571845-67571864 | MS.gene29700:CDS | 40.0% |
! | TCGTTTGCTGCCTTTATAGA+TGG | - | chr5.3:67573384-67573403 | None:intergenic | 40.0% |
! | TTAGTGTCATTCAAACACCC+TGG | + | chr5.3:67572342-67572361 | MS.gene29700:intron | 40.0% |
! | TTGCCATTTGATTCATCAGC+TGG | - | chr5.3:67573527-67573546 | None:intergenic | 40.0% |
!! | AATTTTGGCCCCTCTAGAAA+TGG | + | chr5.3:67569941-67569960 | MS.gene29700:intron | 40.0% |
!! | AGAGTGTTTTTGCAGGTTCA+AGG | + | chr5.3:67570217-67570236 | MS.gene29700:CDS | 40.0% |
!! | GAAAATCGGAGTTTGGTGTA+AGG | + | chr5.3:67569572-67569591 | MS.gene29700:CDS | 40.0% |
!! | GAGTGTTTTTGCAGGTTCAA+GGG | + | chr5.3:67570218-67570237 | MS.gene29700:CDS | 40.0% |
!! | GGCACTGATACTTATCCATA+AGG | - | chr5.3:67572297-67572316 | None:intergenic | 40.0% |
!! | GGCTTGATTCGAGTTTTCTA+GGG | - | chr5.3:67569419-67569438 | None:intergenic | 40.0% |
!! | GTCAGCAAAAGCATTGTTGA+TGG | - | chr5.3:67571731-67571750 | None:intergenic | 40.0% |
AAAGAGAACTACACCACCCT+AGG | - | chr5.3:67573727-67573746 | None:intergenic | 45.0% | |
AAAGGCCAAAGGGTGAAATG+TGG | - | chr5.3:67573568-67573587 | None:intergenic | 45.0% | |
AAGCACGGAAGAGAGAAAAG+TGG | - | chr5.3:67570067-67570086 | None:intergenic | 45.0% | |
ACATGCACTAAGAGGACACA+AGG | - | chr5.3:67570645-67570664 | None:intergenic | 45.0% | |
ACGTCCAATGAAGCTCTCAA+TGG | - | chr5.3:67572730-67572749 | None:intergenic | 45.0% | |
ATAGAATGCGAGTTTGGGGA+CGG | + | chr5.3:67573249-67573268 | MS.gene29700:intron | 45.0% | |
ATCCACCACATTTCACCCTT+TGG | + | chr5.3:67573560-67573579 | MS.gene29700:intron | 45.0% | |
ATTGCTTCAGCGTAAGAAGG+AGG | - | chr5.3:67569361-67569380 | None:intergenic | 45.0% | |
CATAACCATGGTTGCAAGTC+TGG | + | chr5.3:67573471-67573490 | MS.gene29700:intron | 45.0% | |
CATCAGCTGGATGGTCTATT+GGG | - | chr5.3:67573514-67573533 | None:intergenic | 45.0% | |
CATGCACTAAGAGGACACAA+GGG | - | chr5.3:67570644-67570663 | None:intergenic | 45.0% | |
CTCCTCTTGAGGATCAGAAA+CGG | - | chr5.3:67569482-67569501 | None:intergenic | 45.0% | |
CTTCAGGCTGTTATGTTACC+TGG | + | chr5.3:67574005-67574024 | MS.gene29700:intron | 45.0% | |
GACTGCAATGTGACCATACT+TGG | + | chr5.3:67570968-67570987 | MS.gene29700:intron | 45.0% | |
GACTTTCAAAACATGCTGCG+AGG | + | chr5.3:67573941-67573960 | MS.gene29700:CDS | 45.0% | |
GCAAGACATGGGTGAAACAA+TGG | + | chr5.3:67571358-67571377 | MS.gene29700:CDS | 45.0% | |
GTGAAACAATGGGTGAGCTA+GGG | + | chr5.3:67571369-67571388 | MS.gene29700:CDS | 45.0% | |
GTGACTCCATTTCATCGTCT+TGG | - | chr5.3:67569237-67569256 | None:intergenic | 45.0% | |
GTGTCCTCTTAGTGCATGTT+AGG | + | chr5.3:67570646-67570665 | MS.gene29700:intron | 45.0% | |
TACATTGTCGGAGCGGTTAT+CGG | + | chr5.3:67569615-67569634 | MS.gene29700:CDS | 45.0% | |
TAGGGTTGCATCCTGTGATT+GGG | + | chr5.3:67570179-67570198 | MS.gene29700:CDS | 45.0% | |
TAGGGTTTGATCATGACCGT+TGG | - | chr5.3:67569401-67569420 | None:intergenic | 45.0% | |
TCATCAGCTGGATGGTCTAT+TGG | - | chr5.3:67573515-67573534 | None:intergenic | 45.0% | |
TCGAGTTAACTCAGAATCGC+AGG | + | chr5.3:67573142-67573161 | MS.gene29700:intron | 45.0% | |
TCGCAGGAGTTTATCACTCT+AGG | + | chr5.3:67573158-67573177 | MS.gene29700:intron | 45.0% | |
TCTTTCCAGACTTGCAACCA+TGG | - | chr5.3:67573479-67573498 | None:intergenic | 45.0% | |
TTAGGGTTGCATCCTGTGAT+TGG | + | chr5.3:67570178-67570197 | MS.gene29700:CDS | 45.0% | |
TTCCGTTTCTGATCCTCAAG+AGG | + | chr5.3:67569477-67569496 | MS.gene29700:intron | 45.0% | |
TTGCAGCCATGGATATGAGA+TGG | - | chr5.3:67573118-67573137 | None:intergenic | 45.0% | |
TTGGTGTAAGGAGGAGGTTT+CGG | + | chr5.3:67569584-67569603 | MS.gene29700:CDS | 45.0% | |
TTTGAATGATGTGGCTCAGC+CGG | + | chr5.3:67570342-67570361 | MS.gene29700:CDS | 45.0% | |
! | AACTCGAGATTTTGCAGCCA+TGG | - | chr5.3:67573129-67573148 | None:intergenic | 45.0% |
! | ACATCACGTGTTTTACAGGC+AGG | + | chr5.3:67574064-67574083 | MS.gene29700:intron | 45.0% |
! | GATAGTGAGTGGAGTATCCA+AGG | + | chr5.3:67573049-67573068 | MS.gene29700:intron | 45.0% |
!! | AAATCCCTTCCACTTTTCGC+CGG | - | chr5.3:67570364-67570383 | None:intergenic | 45.0% |
!! | AAGGGTGAAATGTGGTGGAT+TGG | - | chr5.3:67573560-67573579 | None:intergenic | 45.0% |
!! | AATCGGAGTTTGGTGTAAGG+AGG | + | chr5.3:67569575-67569594 | MS.gene29700:CDS | 45.0% |
!! | AGGGTGAAATGTGGTGGATT+GGG | - | chr5.3:67573559-67573578 | None:intergenic | 45.0% |
!! | CGGCTTGATTCGAGTTTTCT+AGG | - | chr5.3:67569420-67569439 | None:intergenic | 45.0% |
!! | TAGCGTTGGAGAAGTATCTG+AGG | + | chr5.3:67570152-67570171 | MS.gene29700:CDS | 45.0% |
!!! | GGAGTTGAGAGTGTTTTTGC+AGG | + | chr5.3:67570210-67570229 | MS.gene29700:CDS | 45.0% |
AACAATGGGTGAGCTAGGGT+TGG | + | chr5.3:67571373-67571392 | MS.gene29700:CDS | 50.0% | |
AACTCGAATCAAGCCGGATC+CGG | + | chr5.3:67569424-67569443 | MS.gene29700:intron | 50.0% | |
AAGCGCGAAGAACGTGATCT+TGG | - | chr5.3:67569213-67569232 | None:intergenic | 50.0% | |
AAGGGAAGTTGCCGTTGATG+AGG | + | chr5.3:67570236-67570255 | MS.gene29700:CDS | 50.0% | |
ACATCCGTCGTCCTCATCAA+CGG | - | chr5.3:67570250-67570269 | None:intergenic | 50.0% | |
ACCCACACTAAGAGGACACA+AGG | - | chr5.3:67570836-67570855 | None:intergenic | 50.0% | |
AGAGAAGATGGCTGCTGTGT+GGG | + | chr5.3:67574093-67574112 | MS.gene29700:CDS | 50.0% | |
AGGTGGTTACATTGTCGGAG+CGG | + | chr5.3:67569608-67569627 | MS.gene29700:CDS | 50.0% | |
ATCGAATTCGGTTCCCGATC+CGG | - | chr5.3:67569446-67569465 | None:intergenic | 50.0% | |
CCCACACTAAGAGGACACAA+GGG | - | chr5.3:67570835-67570854 | None:intergenic | 50.0% | |
CCCTTGTGTCCTCTTAGTGT+GGG | + | chr5.3:67570832-67570851 | MS.gene29700:intron | 50.0% | |
CGCTTCCCAAGACGATGAAA+TGG | + | chr5.3:67569228-67569247 | MS.gene29700:CDS | 50.0% | |
CGGTTATCGGAGGTTTATCG+TGG | + | chr5.3:67569628-67569647 | MS.gene29700:CDS | 50.0% | |
CTATCAGGTGATGCAGAAGG+AGG | + | chr5.3:67570108-67570127 | MS.gene29700:intron | 50.0% | |
CTTGCACCATCAACCCTGAT+TGG | - | chr5.3:67572895-67572914 | None:intergenic | 50.0% | |
GATGCAGAAGGAGGAGTTTG+TGG | + | chr5.3:67570117-67570136 | MS.gene29700:CDS | 50.0% | |
GGTGAAACAATGGGTGAGCT+AGG | + | chr5.3:67571368-67571387 | MS.gene29700:CDS | 50.0% | |
GTATGGTCACATTGCAGTCG+CGG | - | chr5.3:67570967-67570986 | None:intergenic | 50.0% | |
GTGGTTATGTGATTCCGGTG+AGG | + | chr5.3:67569647-67569666 | MS.gene29700:CDS | 50.0% | |
GTGTCCTCTTAGTGTGGGTT+TGG | + | chr5.3:67570837-67570856 | MS.gene29700:intron | 50.0% | |
GTTACCTCTTGCTCCTCTTG+AGG | - | chr5.3:67569493-67569512 | None:intergenic | 50.0% | |
TCCTCACTCTTCCCAATCAC+AGG | - | chr5.3:67570193-67570212 | None:intergenic | 50.0% | |
TCCTGTGATTGGGAAGAGTG+AGG | + | chr5.3:67570189-67570208 | MS.gene29700:CDS | 50.0% | |
TCGGGAGGTGGTTACATTGT+CGG | + | chr5.3:67569603-67569622 | MS.gene29700:CDS | 50.0% | |
TGATCCTCAAGAGGAGCAAG+AGG | + | chr5.3:67569486-67569505 | MS.gene29700:intron | 50.0% | |
TGATGGCTAGCATTGTCCCA+AGG | - | chr5.3:67571714-67571733 | None:intergenic | 50.0% | |
TGCTGTGTGGGAAAAGCTTG+CGG | + | chr5.3:67574105-67574124 | MS.gene29700:CDS | 50.0% | |
TGGCGTCAAGGATGCTTGAT+GGG | + | chr5.3:67570269-67570288 | MS.gene29700:CDS | 50.0% | |
TGGTGTAAGGAGGAGGTTTC+GGG | + | chr5.3:67569585-67569604 | MS.gene29700:CDS | 50.0% | |
! | GCATTGTCCCAAGGTATTCG+TGG | - | chr5.3:67571705-67571724 | None:intergenic | 50.0% |
! | GGTGATTTAGGACTTTGCGG+CGG | - | chr5.3:67569319-67569338 | None:intergenic | 50.0% |
!! | GCGAGGGTTTGTTGTCAATC+AGG | + | chr5.3:67573958-67573977 | MS.gene29700:CDS | 50.0% |
AACGGCGGCGATAATTCCTC+CGG | + | chr5.3:67569280-67569299 | MS.gene29700:CDS | 55.0% | |
AATCAAGCCGGATCCGGATC+GGG | + | chr5.3:67569430-67569449 | MS.gene29700:intron | 55.0% | |
AGGAGGAGTTTGTGGAGCAG+AGG | + | chr5.3:67570125-67570144 | MS.gene29700:CDS | 55.0% | |
ATTGTCGGAGCGGTTATCGG+AGG | + | chr5.3:67569618-67569637 | MS.gene29700:CDS | 55.0% | |
CAGAGAAGATGGCTGCTGTG+TGG | + | chr5.3:67574092-67574111 | MS.gene29700:CDS | 55.0% | |
CAGCGTAAGAAGGAGGATCG+AGG | - | chr5.3:67569354-67569373 | None:intergenic | 55.0% | |
CTCTCCACCGAACTCTTCTC+TGG | - | chr5.3:67569673-67569692 | None:intergenic | 55.0% | |
CTGCAGCTGTCAAAGCAAGC+AGG | + | chr5.3:67571483-67571502 | MS.gene29700:CDS | 55.0% | |
GAACTCTTCTCTGGCCTCAC+CGG | - | chr5.3:67569664-67569683 | None:intergenic | 55.0% | |
GAATCAAGCCGGATCCGGAT+CGG | + | chr5.3:67569429-67569448 | MS.gene29700:intron | 55.0% | |
GCAAGAGGTAACGAACTCGC+TGG | + | chr5.3:67569501-67569520 | MS.gene29700:CDS | 55.0% | |
GCCCTTGTGTCCTCTTAGTG+TGG | + | chr5.3:67570640-67570659 | MS.gene29700:intron | 55.0% | |
GGAATTATCGCCGCCGTTGT+CGG | - | chr5.3:67569278-67569297 | None:intergenic | 55.0% | |
GGAGCAGAGGAGATTAGCGT+TGG | + | chr5.3:67570138-67570157 | MS.gene29700:CDS | 55.0% | |
GGCAGGCTATGCAGAGAAGA+TGG | + | chr5.3:67574081-67574100 | MS.gene29700:intron | 55.0% | |
GGCCAAAGGGTGAAATGTGG+TGG | - | chr5.3:67573565-67573584 | None:intergenic | 55.0% | |
GGCGTCAAGGATGCTTGATG+GGG | + | chr5.3:67570270-67570289 | MS.gene29700:CDS | 55.0% | |
GGTGAGGCCAGAGAAGAGTT+CGG | + | chr5.3:67569663-67569682 | MS.gene29700:CDS | 55.0% | |
GTCAAGGATGCTTGATGGGG+CGG | + | chr5.3:67570273-67570292 | MS.gene29700:CDS | 55.0% | |
GTGGCGTCAAGGATGCTTGA+TGG | + | chr5.3:67570268-67570287 | MS.gene29700:CDS | 55.0% | |
TCAGCCGGCGAAAAGTGGAA+GGG | + | chr5.3:67570357-67570376 | MS.gene29700:CDS | 55.0% | |
TGTAAGGAGGAGGTTTCGGG+AGG | + | chr5.3:67569588-67569607 | MS.gene29700:CDS | 55.0% | |
! | CAGAGAAGAGTTCGGTGGAG+AGG | + | chr5.3:67569671-67569690 | MS.gene29700:CDS | 55.0% |
! | GAAGAGTTCGGTGGAGAGGA+AGG | + | chr5.3:67569675-67569694 | MS.gene29700:CDS | 55.0% |
! | GTTGATGAGGACGACGGATG+TGG | + | chr5.3:67570249-67570268 | MS.gene29700:CDS | 55.0% |
! | GTTGCCGTTGATGAGGACGA+CGG | + | chr5.3:67570243-67570262 | MS.gene29700:CDS | 55.0% |
!! | CGGAGTTTGGTGTAAGGAGG+AGG | + | chr5.3:67569578-67569597 | MS.gene29700:CDS | 55.0% |
!! | GTAACGAACTCGCTGGTTCC+AGG | + | chr5.3:67569508-67569527 | MS.gene29700:CDS | 55.0% |
!! | TGTGATGCCAGGTTGGCCTA+GGG | + | chr5.3:67573708-67573727 | MS.gene29700:intron | 55.0% |
!! | TTGGGGAGGTGCTAAGCCAT+TGG | + | chr5.3:67570426-67570445 | MS.gene29700:CDS | 55.0% |
!! | TTGTGATGCCAGGTTGGCCT+AGG | + | chr5.3:67573707-67573726 | MS.gene29700:intron | 55.0% |
AAGGAGGAGGTTTCGGGAGG+TGG | + | chr5.3:67569591-67569610 | MS.gene29700:CDS | 60.0% | |
CGGCGGTTGTTGAACGTTGC+CGG | - | chr5.3:67569302-67569321 | None:intergenic | 60.0% | |
CGGTTGTTGAACGTTGCCGG+AGG | - | chr5.3:67569299-67569318 | None:intergenic | 60.0% | |
CTCAGCCGGCGAAAAGTGGA+AGG | + | chr5.3:67570356-67570375 | MS.gene29700:CDS | 60.0% | |
GAGGCCAGAGAAGAGTTCGG+TGG | + | chr5.3:67569666-67569685 | MS.gene29700:CDS | 60.0% | |
TACACCACCCTAGGCCAACC+TGG | - | chr5.3:67573718-67573737 | None:intergenic | 60.0% | |
TTCGGTTCCCGATCCGGATC+CGG | - | chr5.3:67569440-67569459 | None:intergenic | 60.0% | |
! | AGCTGTTTGGGGCGGAGAGT+GGG | + | chr5.3:67570311-67570330 | MS.gene29700:CDS | 60.0% |
!! | ACGAACTCGCTGGTTCCAGG+TGG | + | chr5.3:67569511-67569530 | MS.gene29700:CDS | 60.0% |
AGGCTGCCACGGCAGCTGTT+TGG | + | chr5.3:67570298-67570317 | MS.gene29700:CDS | 65.0% | |
CTCCACGACGACGCCGACAA+CGG | + | chr5.3:67569262-67569281 | MS.gene29700:CDS | 65.0% | |
GCTGCCACGGCAGCTGTTTG+GGG | + | chr5.3:67570300-67570319 | MS.gene29700:CDS | 65.0% | |
GGACGACGGATGTGGCGTCA+AGG | + | chr5.3:67570257-67570276 | MS.gene29700:CDS | 65.0% | |
GGATGCTTGATGGGGCGGTG+AGG | + | chr5.3:67570278-67570297 | MS.gene29700:CDS | 65.0% | |
GGCTGCCACGGCAGCTGTTT+GGG | + | chr5.3:67570299-67570318 | MS.gene29700:CDS | 65.0% | |
GTGGCTCAGCCGGCGAAAAG+TGG | + | chr5.3:67570352-67570371 | MS.gene29700:CDS | 65.0% | |
! | CAGCTGTTTGGGGCGGAGAG+TGG | + | chr5.3:67570310-67570329 | MS.gene29700:CDS | 65.0% |
! | GCTGTTTGGGGCGGAGAGTG+GGG | + | chr5.3:67570312-67570331 | MS.gene29700:CDS | 65.0% |
!! | GATGCCAGGTTGGCCTAGGG+TGG | + | chr5.3:67573711-67573730 | MS.gene29700:intron | 65.0% |
ATGGGGCGGTGAGGCTGCCA+CGG | + | chr5.3:67570287-67570306 | MS.gene29700:CDS | 70.0% | |
CACGACGACGCCGACAACGG+CGG | + | chr5.3:67569265-67569284 | MS.gene29700:CDS | 70.0% | |
CGTTGTCGGCGTCGTCGTGG+AGG | - | chr5.3:67569264-67569283 | None:intergenic | 70.0% | |
GCCACGGCAGCTGTTTGGGG+CGG | + | chr5.3:67570303-67570322 | MS.gene29700:CDS | 70.0% | |
TCCGCCCCAAACAGCTGCCG+TGG | - | chr5.3:67570307-67570326 | None:intergenic | 70.0% | |
CGCCGTTGTCGGCGTCGTCG+TGG | - | chr5.3:67569267-67569286 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 67569202 | 67574162 | 67569202 | ID=MS.gene29700 |
chr5.3 | mRNA | 67569202 | 67574162 | 67569202 | ID=MS.gene29700.t1;Parent=MS.gene29700 |
chr5.3 | exon | 67569202 | 67569403 | 67569202 | ID=MS.gene29700.t1.exon1;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67569202 | 67569403 | 67569202 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
chr5.3 | exon | 67569497 | 67569696 | 67569497 | ID=MS.gene29700.t1.exon2;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67569497 | 67569696 | 67569497 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
chr5.3 | exon | 67570115 | 67570531 | 67570115 | ID=MS.gene29700.t1.exon3;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67570115 | 67570531 | 67570115 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
chr5.3 | exon | 67571335 | 67571544 | 67571335 | ID=MS.gene29700.t1.exon4;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67571335 | 67571544 | 67571335 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
chr5.3 | exon | 67571694 | 67571954 | 67571694 | ID=MS.gene29700.t1.exon5;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67571694 | 67571954 | 67571694 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
chr5.3 | exon | 67573893 | 67573979 | 67573893 | ID=MS.gene29700.t1.exon6;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67573893 | 67573979 | 67573893 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
chr5.3 | exon | 67574082 | 67574162 | 67574082 | ID=MS.gene29700.t1.exon7;Parent=MS.gene29700.t1 |
chr5.3 | CDS | 67574082 | 67574162 | 67574082 | ID=cds.MS.gene29700.t1;Parent=MS.gene29700.t1 |
Gene Sequence |
Protein sequence |