Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33763.t1 | XP_013457082.1 | 96.3 | 655 | 24 | 0 | 1 | 655 | 1 | 655 | 0.00E+00 | 1084.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33763.t1 | Q9C950 | 64.6 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 5.5e-193 | 675.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33763.t1 | A0A072UPW1 | 96.3 | 655 | 24 | 0 | 1 | 655 | 1 | 655 | 0.0e+00 | 1084.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene33763 | 0.801237 | 9.90E-49 | -1.69E-46 |
| MS.gene049411 | MS.gene33763 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene049807 | MS.gene33763 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene050359 | MS.gene33763 | 0.835389 | 1.73E-56 | -1.69E-46 |
| MS.gene050384 | MS.gene33763 | 0.810094 | 1.37E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene33763 | 0.817001 | 4.14E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene33763 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene33763 | 0.848958 | 4.40E-60 | -1.69E-46 |
| MS.gene050646 | MS.gene33763 | 0.853108 | 2.97E-61 | -1.69E-46 |
| MS.gene050689 | MS.gene33763 | 0.828942 | 6.79E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene33763 | 0.837248 | 5.81E-57 | -1.69E-46 |
| MS.gene051029 | MS.gene33763 | 0.809732 | 1.64E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene33763 | 0.813152 | 2.96E-51 | -1.69E-46 |
| MS.gene051233 | MS.gene33763 | 0.816678 | 4.89E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene33763 | 0.834559 | 2.79E-56 | -1.69E-46 |
| MS.gene051343 | MS.gene33763 | 0.833899 | 4.09E-56 | -1.69E-46 |
| MS.gene051381 | MS.gene33763 | 0.837897 | 3.96E-57 | -1.69E-46 |
| MS.gene051642 | MS.gene33763 | 0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene051902 | MS.gene33763 | 0.811359 | 7.28E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene33763 | 0.824487 | 7.86E-54 | -1.69E-46 |
| MS.gene052242 | MS.gene33763 | -0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene33763 | 0.827713 | 1.34E-54 | -1.69E-46 |
| MS.gene052335 | MS.gene33763 | 0.861026 | 1.37E-63 | -1.69E-46 |
| MS.gene052342 | MS.gene33763 | 0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene33763 | 0.870456 | 1.44E-66 | -1.69E-46 |
| MS.gene052609 | MS.gene33763 | 0.848767 | 4.97E-60 | -1.69E-46 |
| MS.gene053058 | MS.gene33763 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene33763 | 0.806197 | 9.24E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene33763 | 0.826758 | 2.28E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene33763 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene33763 | 0.81011 | 1.36E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene33763 | 0.818116 | 2.32E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene33763 | 0.806443 | 8.21E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene33763 | 0.812404 | 4.31E-51 | -1.69E-46 |
| MS.gene056097 | MS.gene33763 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene33763 | 0.814908 | 1.21E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene33763 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene33763 | 0.811018 | 8.63E-51 | -1.69E-46 |
| MS.gene057576 | MS.gene33763 | 0.804565 | 2.03E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene33763 | 0.802792 | 4.74E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene33763 | 0.811303 | 7.49E-51 | -1.69E-46 |
| MS.gene058639 | MS.gene33763 | 0.812541 | 4.03E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene33763 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene33763 | 0.805774 | 1.13E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene33763 | 0.806876 | 6.65E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene33763 | 0.817759 | 2.79E-52 | -1.69E-46 |
| MS.gene060343 | MS.gene33763 | -0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene061006 | MS.gene33763 | 0.833674 | 4.66E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene33763 | 0.825564 | 4.38E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33763 | MS.gene64820 | PPI |
| MS.gene33763 | MS.gene67685 | PPI |
| MS.gene33763 | MS.gene67503 | PPI |
| MS.gene33763 | MS.gene063673 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33763.t1 | MTR_4g089070 | 99.237 | 655 | 5 | 0 | 1 | 655 | 1 | 655 | 0.0 | 1314 |
| MS.gene33763.t1 | MTR_7g099060 | 69.681 | 564 | 158 | 5 | 94 | 655 | 72 | 624 | 0.0 | 726 |
| MS.gene33763.t1 | MTR_4g032885 | 49.852 | 676 | 289 | 15 | 1 | 655 | 1 | 647 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33763.t1 | AT1G61040 | 64.643 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 721 |
| MS.gene33763.t1 | AT1G61040 | 64.643 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 721 |
| MS.gene33763.t1 | AT1G61040 | 64.643 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 721 |
Find 180 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAGGGGCTATCCTTTC+AGG | 0.171046 | 4.4:-23637105 | MS.gene33763:CDS |
| GAAACTTGCGAAATGGTTTA+TGG | 0.192619 | 4.4:-23637054 | MS.gene33763:CDS |
| TTCATTTAATGCTTCATTCT+TGG | 0.222704 | 4.4:+23637361 | None:intergenic |
| CTTGTCCACCTTCTTGAAAA+TGG | 0.242437 | 4.4:+23636372 | None:intergenic |
| AGGAGCTCAGGCAGGATTTA+TGG | 0.245228 | 4.4:-23636070 | MS.gene33763:CDS |
| GTCCAACACATCCTGCTTGC+TGG | 0.246370 | 4.4:+23636743 | None:intergenic |
| CTCAATCTACGGCGAGCTTC+TGG | 0.252204 | 4.4:+23637308 | None:intergenic |
| CTAGACCACTATGGCAGATT+TGG | 0.280131 | 4.4:-23637909 | None:intergenic |
| ACAAGTATTTGAATGTTGTT+TGG | 0.305232 | 4.4:-23636881 | MS.gene33763:CDS |
| CGGATGGTGGGAGTGATTCT+AGG | 0.310126 | 4.4:-23637790 | MS.gene33763:CDS |
| TTAGCATTACTTCATAAGTA+TGG | 0.312059 | 4.4:-23636102 | MS.gene33763:CDS |
| GTCCTTCACCTTTGCATGTC+TGG | 0.313091 | 4.4:+23636509 | None:intergenic |
| CAAGTATTTGAATGTTGTTT+GGG | 0.325352 | 4.4:-23636880 | MS.gene33763:CDS |
| TTACGGGACCCTGAGCTTCT+AGG | 0.331353 | 4.4:+23637278 | None:intergenic |
| AAAGGACGATAAAAGTTTAC+TGG | 0.334647 | 4.4:-23637495 | MS.gene33763:CDS |
| TTCAGCCAGCTTCAGAGCTT+TGG | 0.335439 | 4.4:+23636485 | None:intergenic |
| GGAATATAAGCAGTGGGTTA+AGG | 0.335444 | 4.4:-23636793 | MS.gene33763:CDS |
| GGCCGACAGAGATGATGATT+TGG | 0.344579 | 4.4:-23637684 | MS.gene33763:CDS |
| TGAAGTAATGCTAATGAAAC+TGG | 0.345518 | 4.4:+23636111 | None:intergenic |
| GATGATGATAGGGCATTATC+TGG | 0.351955 | 4.4:-23637128 | MS.gene33763:CDS |
| GCAGGAAGAACTGGTGCAGC+TGG | 0.367596 | 4.4:-23637866 | MS.gene33763:CDS |
| GCTATCCTTTCAGGATATAA+AGG | 0.369861 | 4.4:-23637096 | MS.gene33763:CDS |
| TAAATCCTGCCTGAGCTCCT+TGG | 0.376568 | 4.4:+23636073 | None:intergenic |
| TTGGAAGCTGCTGCTGATGC+TGG | 0.377240 | 4.4:-23636204 | MS.gene33763:CDS |
| AGTGATGATGAAGGGTCAAC+TGG | 0.380812 | 4.4:-23637173 | MS.gene33763:CDS |
| AAATCCTGCCTGAGCTCCTT+GGG | 0.381424 | 4.4:+23636074 | None:intergenic |
| TCTAGTTTATACTGTCGATC+AGG | 0.382459 | 4.4:+23636918 | None:intergenic |
| AGATTTGGAAAATTTGCTTT+TGG | 0.383099 | 4.4:-23637894 | MS.gene33763:CDS |
| TCCAACACATCCTGCTTGCT+GGG | 0.387672 | 4.4:+23636744 | None:intergenic |
| GGCAAGACTGCTAGAATTAG+AGG | 0.388259 | 4.4:-23636535 | MS.gene33763:CDS |
| GATGCAGGCGCCAACGGAAC+TGG | 0.389784 | 4.4:-23636273 | MS.gene33763:CDS |
| GGATCGGTTAAGGAGCGATT+TGG | 0.389865 | 4.4:-23636604 | MS.gene33763:CDS |
| AGAGAGGCTCCTAGAAGCTC+AGG | 0.394299 | 4.4:-23637287 | MS.gene33763:CDS |
| ACCTACTTTCACTATCACTA+TGG | 0.400930 | 4.4:+23637201 | None:intergenic |
| TTGGAGGCTGCAGGAAGAAC+TGG | 0.405599 | 4.4:-23637875 | MS.gene33763:CDS |
| CTGGTGCAGCTGGGAGAAAT+CGG | 0.410742 | 4.4:-23637856 | MS.gene33763:CDS |
| GGCTGACCTATCGGCAGATC+TGG | 0.420016 | 4.4:+23637382 | None:intergenic |
| AGATGATGATTTGGGTAGTC+AGG | 0.424756 | 4.4:-23637675 | MS.gene33763:CDS |
| CATCCTGCTTGCTGGGCATC+CGG | 0.425090 | 4.4:+23636751 | None:intergenic |
| GCGCCAGACTCTGCAGTTAC+CGG | 0.428066 | 4.4:+23636246 | None:intergenic |
| GTTGGTTGCTTTGTAAGAGT+TGG | 0.430881 | 4.4:-23637008 | MS.gene33763:CDS |
| GCTTTGGTGGGGAAAAGTTA+CGG | 0.432496 | 4.4:+23637261 | None:intergenic |
| TTCTTCGAGGAGTTGATAGT+TGG | 0.436708 | 4.4:-23637026 | MS.gene33763:CDS |
| CTTTGGTGGGGAAAAGTTAC+GGG | 0.440397 | 4.4:+23637262 | None:intergenic |
| TGGTGGAGCCCAAGGAGCTC+AGG | 0.441296 | 4.4:-23636082 | MS.gene33763:CDS |
| GGAATTGGTAGATCTAAAAC+TGG | 0.441526 | 4.4:-23636987 | MS.gene33763:CDS |
| TGATTCTAGGGACGATGATT+CGG | 0.441920 | 4.4:-23637777 | MS.gene33763:CDS |
| CTCTGCTGCGAGGTGGCAAA+TGG | 0.444979 | 4.4:-23636847 | MS.gene33763:CDS |
| TTGCTGACAGTGATGATGAT+AGG | 0.449554 | 4.4:-23637139 | MS.gene33763:CDS |
| CAAGAAGGTGGACAAGATCA+AGG | 0.452160 | 4.4:-23636365 | MS.gene33763:CDS |
| GTACCGGTAACTGCAGAGTC+TGG | 0.458427 | 4.4:-23636249 | MS.gene33763:CDS |
| ACCAGTGATGAATCAAATAT+CGG | 0.459937 | 4.4:-23637611 | MS.gene33763:CDS |
| TCAAGAATGCTTCTGAATTG+AGG | 0.460579 | 4.4:-23636434 | MS.gene33763:CDS |
| GCCGACAGAGATGATGATTT+GGG | 0.461153 | 4.4:-23637683 | MS.gene33763:CDS |
| ACGACATGATGGCTCCTATT+CGG | 0.462155 | 4.4:-23637810 | MS.gene33763:CDS |
| GATGAAGGGTCAACTGGGGA+TGG | 0.465099 | 4.4:-23637167 | MS.gene33763:CDS |
| GTTGGCTTAGTTTCTGATGC+AGG | 0.468889 | 4.4:-23636288 | MS.gene33763:CDS |
| CTGCTGAGAAGGATCGGTTA+AGG | 0.472424 | 4.4:-23636614 | MS.gene33763:CDS |
| GCAGGTCGAAACTTGCGAAA+TGG | 0.472493 | 4.4:-23637061 | MS.gene33763:CDS |
| TTCATTCTTGGCTGACCTAT+CGG | 0.475537 | 4.4:+23637373 | None:intergenic |
| GATGTGAAAGACTTGCGCTT+TGG | 0.476371 | 4.4:+23637245 | None:intergenic |
| CCATTAACCGGTTTAAAAGA+AGG | 0.478030 | 4.4:-23636411 | MS.gene33763:CDS |
| TCTGAATTGAGGCCATTAAC+CGG | 0.478837 | 4.4:-23636423 | MS.gene33763:CDS |
| TTCTCAGCAGCAATATTTAG+CGG | 0.479881 | 4.4:+23636627 | None:intergenic |
| ATCACTCCCACCATCCGAAT+AGG | 0.488688 | 4.4:+23637796 | None:intergenic |
| ACGAGTGCTCCGGTGGATCA+AGG | 0.488751 | 4.4:-23636168 | MS.gene33763:CDS |
| TCTAAAGAAAAGATTAGATC+CGG | 0.489106 | 4.4:-23637705 | MS.gene33763:CDS |
| GGTTTAAAAGAAGGGGATGC+AGG | 0.489652 | 4.4:-23636402 | MS.gene33763:CDS |
| GGTGGCTACTGCCATTGCCT+TGG | 0.489865 | 4.4:-23636223 | MS.gene33763:CDS |
| TATGCAAGCAGAAAGCCATC+TGG | 0.492063 | 4.4:-23637740 | MS.gene33763:CDS |
| TGCTGCTGATGCTGGAAAGT+TGG | 0.493452 | 4.4:-23636196 | MS.gene33763:CDS |
| GGCACTCTCTCCCACCTTCG+AGG | 0.493621 | 4.4:-23637835 | MS.gene33763:CDS |
| TAAGCAGTGGGTTAAGGAAG+TGG | 0.495237 | 4.4:-23636787 | MS.gene33763:CDS |
| TGCTTTGTAAGAGTTGGAAT+TGG | 0.497334 | 4.4:-23637002 | MS.gene33763:CDS |
| CAGGAAGAAGCAGATGATGA+TGG | 0.500980 | 4.4:-23637656 | MS.gene33763:CDS |
| ATTGCATCAAAGCGTGAGAA+AGG | 0.501489 | 4.4:-23637467 | MS.gene33763:CDS |
| GTTTATGGAGCCTTTCTTCG+AGG | 0.503115 | 4.4:-23637039 | MS.gene33763:CDS |
| TGGCCGGATGCCCAGCAAGC+AGG | 0.503690 | 4.4:-23636754 | MS.gene33763:CDS |
| GCCCAGCAAGCAGGATGTGT+TGG | 0.504729 | 4.4:-23636745 | MS.gene33763:CDS |
| AGGGCATTATCTGGATCTGA+GGG | 0.508292 | 4.4:-23637119 | MS.gene33763:CDS |
| CATTAACCGGTTTAAAAGAA+GGG | 0.511793 | 4.4:-23636410 | MS.gene33763:CDS |
| AAGTGGAACGGAGTGGTGGC+CGG | 0.511876 | 4.4:-23636770 | MS.gene33763:CDS |
| GCTAAATATTGCTGCTGAGA+AGG | 0.511981 | 4.4:-23636625 | MS.gene33763:CDS |
| ACTATCAACTCCTCGAAGAA+AGG | 0.513788 | 4.4:+23637029 | None:intergenic |
| AAAGGAAAGGCAATAATGAC+TGG | 0.514262 | 4.4:-23637449 | MS.gene33763:CDS |
| GCCGATATTTGATTCATCAC+TGG | 0.517944 | 4.4:+23637610 | None:intergenic |
| TGTTGCAACACCTAGTGAAA+AGG | 0.522228 | 4.4:-23636334 | MS.gene33763:CDS |
| GCTTTGAATAATAATACAGT+TGG | 0.523899 | 4.4:-23636306 | MS.gene33763:CDS |
| TTTAAACTCTCGGAAAATGA+TGG | 0.524376 | 4.4:-23636015 | MS.gene33763:CDS |
| TAAGAACGATGATGTGGAAG+TGG | 0.526485 | 4.4:-23636568 | MS.gene33763:CDS |
| TGCTTATATTCCTCTTCAAG+TGG | 0.530910 | 4.4:+23636804 | None:intergenic |
| CGACTCTCCTCCACTTGAAG+AGG | 0.532180 | 4.4:-23636814 | MS.gene33763:CDS |
| GGACGCCAAAGCTCTGAAGC+TGG | 0.533086 | 4.4:-23636490 | MS.gene33763:CDS |
| AACAGTTGGATTTAAACTCT+CGG | 0.535156 | 4.4:-23636025 | MS.gene33763:CDS |
| ACCATGCAGAGCCGATAGAT+AGG | 0.535837 | 4.4:+23636963 | None:intergenic |
| TCATGTCGTCTCCTCGAAGG+TGG | 0.537598 | 4.4:+23637824 | None:intergenic |
| AACTCTCGGAAAATGATGGC+AGG | 0.539618 | 4.4:-23636011 | MS.gene33763:CDS |
| GGAGCCCAAGGAGCTCAGGC+AGG | 0.540666 | 4.4:-23636078 | MS.gene33763:CDS |
| GTGAAAGACTTGCGCTTTGG+TGG | 0.540925 | 4.4:+23637248 | None:intergenic |
| GTTTCTGATGCAGGCGCCAA+CGG | 0.547991 | 4.4:-23636279 | MS.gene33763:CDS |
| GAAGGGTCAACTGGGGATGG+AGG | 0.548587 | 4.4:-23637164 | MS.gene33763:CDS |
| TATTTCCTTTATATCCTGAA+AGG | 0.548926 | 4.4:+23637091 | None:intergenic |
| CTAGTTTATACTGTCGATCA+GGG | 0.549414 | 4.4:+23636919 | None:intergenic |
| AAATCATCATCTCTGTCGGC+CGG | 0.550882 | 4.4:+23637686 | None:intergenic |
| TTGAAGAGGAATATAAGCAG+TGG | 0.551720 | 4.4:-23636800 | MS.gene33763:CDS |
| TAGGAGCCTCTCTCAATCTA+CGG | 0.552930 | 4.4:+23637297 | None:intergenic |
| AGGAAGAAGCAGATGATGAT+GGG | 0.553651 | 4.4:-23637655 | MS.gene33763:CDS |
| CAGGAAGAACTGGTGCAGCT+GGG | 0.554030 | 4.4:-23637865 | MS.gene33763:CDS |
| GATTCCGTCCCTTGATCCAC+CGG | 0.555339 | 4.4:+23636159 | None:intergenic |
| TAAAGGAAATAACTATTCGC+AGG | 0.556325 | 4.4:-23637079 | MS.gene33763:CDS |
| AGAGGAACTTGTGATCCAGA+TGG | 0.558880 | 4.4:+23637725 | None:intergenic |
| CGCCAACGGAACTGGAGTAC+CGG | 0.559046 | 4.4:-23636265 | MS.gene33763:CDS |
| AGGTCTCACAGTGATGATGA+AGG | 0.560003 | 4.4:-23637182 | MS.gene33763:CDS |
| GTGATGATGAAGGGTCAACT+GGG | 0.560268 | 4.4:-23637172 | MS.gene33763:CDS |
| TACCGGTACTCCAGTTCCGT+TGG | 0.560498 | 4.4:+23636263 | None:intergenic |
| AGCATCAGCAGCAGCTTCCA+AGG | 0.560846 | 4.4:+23636206 | None:intergenic |
| CGAGTGCTCCGGTGGATCAA+GGG | 0.561052 | 4.4:-23636167 | MS.gene33763:CDS |
| CATAAGTATGGTGGAGCCCA+AGG | 0.561256 | 4.4:-23636090 | MS.gene33763:CDS |
| TGAAAGACTTGCGCTTTGGT+GGG | 0.565341 | 4.4:+23637249 | None:intergenic |
| AGCAGCAGCTTCCAAGGCAA+TGG | 0.566339 | 4.4:+23636212 | None:intergenic |
| GGATGGTGGGAGTGATTCTA+GGG | 0.568352 | 4.4:-23637789 | MS.gene33763:CDS |
| ACCTATCTATCGGCTCTGCA+TGG | 0.568699 | 4.4:-23636964 | MS.gene33763:CDS |
| GTTGGTGGATACGAGTGCTC+CGG | 0.569612 | 4.4:-23636178 | MS.gene33763:CDS |
| TGCTGACAGTGATGATGATA+GGG | 0.571331 | 4.4:-23637138 | MS.gene33763:CDS |
| CTAAAACTGGACCTATCTAT+CGG | 0.572540 | 4.4:-23636974 | MS.gene33763:CDS |
| GGTGATTACAAAAGAAGAAG+AGG | 0.573086 | 4.4:-23635964 | MS.gene33763:CDS |
| CAAAGAATAGAATCAACAGT+TGG | 0.573933 | 4.4:-23636039 | MS.gene33763:CDS |
| TGCTGATGCTGGAAAGTTGG+TGG | 0.573970 | 4.4:-23636193 | MS.gene33763:CDS |
| ATGGCTCCTATTCGGATGGT+GGG | 0.577523 | 4.4:-23637802 | MS.gene33763:CDS |
| TGTGGAAGTGGAGAGGATCA+AGG | 0.577964 | 4.4:-23636556 | MS.gene33763:CDS |
| TCTACAAAGACGAAGATGAC+AGG | 0.581505 | 4.4:-23637580 | MS.gene33763:CDS |
| TAGGGCATTATCTGGATCTG+AGG | 0.584974 | 4.4:-23637120 | MS.gene33763:CDS |
| GCATTACTTCATAAGTATGG+TGG | 0.585022 | 4.4:-23636099 | MS.gene33763:CDS |
| AAGGACGATAAAAGTTTACT+GGG | 0.586185 | 4.4:-23637494 | MS.gene33763:CDS |
| GGTGGATACGAGTGCTCCGG+TGG | 0.588884 | 4.4:-23636175 | MS.gene33763:CDS |
| AACTGCAGAGTCTGGCGCGG+TGG | 0.592507 | 4.4:-23636241 | MS.gene33763:CDS |
| ATATTGCTGCTGAGAAGGAT+CGG | 0.593340 | 4.4:-23636620 | MS.gene33763:CDS |
| GATGGCTCCTATTCGGATGG+TGG | 0.594177 | 4.4:-23637803 | MS.gene33763:CDS |
| ATCCAGACATGCAAAGGTGA+AGG | 0.594199 | 4.4:-23636511 | MS.gene33763:CDS |
| CCATCATGTCGTCTCCTCGA+AGG | 0.596373 | 4.4:+23637821 | None:intergenic |
| ACCCAAATCATCATCTCTGT+CGG | 0.596745 | 4.4:+23637682 | None:intergenic |
| ATTAACCGGTTTAAAAGAAG+GGG | 0.598511 | 4.4:-23636409 | MS.gene33763:CDS |
| AATATTTAGCGGCCTTGACG+AGG | 0.600006 | 4.4:+23636638 | None:intergenic |
| AGAGGCATCCAGACATGCAA+AGG | 0.600916 | 4.4:-23636517 | MS.gene33763:CDS |
| GCATGCGAGATGATGAAAGT+GGG | 0.602189 | 4.4:+23637414 | None:intergenic |
| AAGTATTTGAATGTTGTTTG+GGG | 0.602265 | 4.4:-23636879 | MS.gene33763:CDS |
| GCCATAGTGATAGTGAAAGT+AGG | 0.603787 | 4.4:-23637202 | MS.gene33763:CDS |
| TTATATTCCTCTTCAAGTGG+AGG | 0.604750 | 4.4:+23636807 | None:intergenic |
| CATGATGGCTCCTATTCGGA+TGG | 0.607216 | 4.4:-23637806 | MS.gene33763:CDS |
| TAAATGAACTGCGTGCAAAG+AGG | 0.617319 | 4.4:-23637346 | MS.gene33763:CDS |
| CGCATGCGAGATGATGAAAG+TGG | 0.622352 | 4.4:+23637413 | None:intergenic |
| TGAAGAGGAATATAAGCAGT+GGG | 0.622796 | 4.4:-23636799 | MS.gene33763:CDS |
| TGCTCCGGTGGATCAAGGGA+CGG | 0.626963 | 4.4:-23636163 | MS.gene33763:CDS |
| GAAAGACTTGCGCTTTGGTG+GGG | 0.627091 | 4.4:+23637250 | None:intergenic |
| ATACTGTCGATCAGGGTCTG+AGG | 0.628006 | 4.4:+23636926 | None:intergenic |
| AGCTCGCCGTAGATTGAGAG+AGG | 0.631416 | 4.4:-23637303 | MS.gene33763:CDS |
| CATGTATTGACTCTGTCAGT+TGG | 0.631980 | 4.4:-23635985 | MS.gene33763:CDS |
| GGTCTCACAGTGATGATGAA+GGG | 0.632087 | 4.4:-23637181 | MS.gene33763:CDS |
| CATGTCGTCTCCTCGAAGGT+GGG | 0.633501 | 4.4:+23637825 | None:intergenic |
| ATGCGAGATGATGAAAGTGG+GGG | 0.633726 | 4.4:+23637416 | None:intergenic |
| TGCGAGATGATGAAAGTGGG+GGG | 0.635142 | 4.4:+23637417 | None:intergenic |
| ACGATGATGTGGAAGTGGAG+AGG | 0.638337 | 4.4:-23636563 | MS.gene33763:CDS |
| GTTAAGGAAGTGGAACGGAG+TGG | 0.638804 | 4.4:-23636777 | MS.gene33763:CDS |
| CCTTCGAGGAGACGACATGA+TGG | 0.639492 | 4.4:-23637821 | MS.gene33763:CDS |
| GAGAGGCTCCTAGAAGCTCA+GGG | 0.641941 | 4.4:-23637286 | MS.gene33763:CDS |
| AAGGAAGTGGAACGGAGTGG+TGG | 0.642363 | 4.4:-23636774 | MS.gene33763:CDS |
| GATGGGCGAAGCGATCGTGA+AGG | 0.642869 | 4.4:-23637638 | MS.gene33763:CDS |
| CATCTGCCAGATCTGCCGAT+AGG | 0.645205 | 4.4:-23637388 | MS.gene33763:CDS |
| CATGCGAGATGATGAAAGTG+GGG | 0.650744 | 4.4:+23637415 | None:intergenic |
| ATCAAAGCGTGAGAAAGGAA+AGG | 0.653833 | 4.4:-23637462 | MS.gene33763:CDS |
| ATGAAAGCTCTGCTGCGAGG+TGG | 0.660569 | 4.4:-23636854 | MS.gene33763:CDS |
| AGCGATTTGGAAAGAGCACA+AGG | 0.666283 | 4.4:-23636591 | MS.gene33763:CDS |
| ACAAGGTAAGAACGATGATG+TGG | 0.678810 | 4.4:-23636574 | MS.gene33763:CDS |
| GGTAACTGCAGAGTCTGGCG+CGG | 0.695507 | 4.4:-23636244 | MS.gene33763:CDS |
| GCGAGATGATGAAAGTGGGG+GGG | 0.695667 | 4.4:+23637418 | None:intergenic |
| AGTGGGTTAAGGAAGTGGAA+CGG | 0.697326 | 4.4:-23636782 | MS.gene33763:CDS |
| ACAAAGACGAAGATGACAGG+CGG | 0.721953 | 4.4:-23637577 | MS.gene33763:CDS |
| GAAATGAAAGCTCTGCTGCG+AGG | 0.724498 | 4.4:-23636857 | MS.gene33763:CDS |
| GGGCATTATCTGGATCTGAG+GGG | 0.759567 | 4.4:-23637118 | MS.gene33763:CDS |
| TGATGATGAAGGGTCAACTG+GGG | 0.771361 | 4.4:-23637171 | MS.gene33763:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACAAGTATTTGAATGTTGTT+TGG | - | chr4.4:23636972-23636991 | MS.gene33763:CDS | 25.0% |
| ! | TATTTCCTTTATATCCTGAA+AGG | + | chr4.4:23636765-23636784 | None:intergenic | 25.0% |
| ! | TCTAAAGAAAAGATTAGATC+CGG | - | chr4.4:23636148-23636167 | MS.gene33763:CDS | 25.0% |
| ! | TGAAATGAACAGAAAAAACA+GGG | - | chr4.4:23637387-23637406 | MS.gene33763:CDS | 25.0% |
| ! | TTAGCATTACTTCATAAGTA+TGG | - | chr4.4:23637751-23637770 | MS.gene33763:CDS | 25.0% |
| ! | TTCATTTAATGCTTCATTCT+TGG | + | chr4.4:23636495-23636514 | None:intergenic | 25.0% |
| !! | AAGTATTTGAATGTTGTTTG+GGG | - | chr4.4:23636974-23636993 | MS.gene33763:CDS | 25.0% |
| !! | CAAGTATTTGAATGTTGTTT+GGG | - | chr4.4:23636973-23636992 | MS.gene33763:CDS | 25.0% |
| !! | GCTTTGAATAATAATACAGT+TGG | - | chr4.4:23637547-23637566 | MS.gene33763:CDS | 25.0% |
| !!! | AGATTTGGAAAATTTGCTTT+TGG | - | chr4.4:23635959-23635978 | MS.gene33763:CDS | 25.0% |
| AAAGGACGATAAAAGTTTAC+TGG | - | chr4.4:23636358-23636377 | MS.gene33763:CDS | 30.0% | |
| AACAGTTGGATTTAAACTCT+CGG | - | chr4.4:23637828-23637847 | MS.gene33763:CDS | 30.0% | |
| AAGGACGATAAAAGTTTACT+GGG | - | chr4.4:23636359-23636378 | MS.gene33763:CDS | 30.0% | |
| ACCAGTGATGAATCAAATAT+CGG | - | chr4.4:23636242-23636261 | MS.gene33763:CDS | 30.0% | |
| CAAAGAATAGAATCAACAGT+TGG | - | chr4.4:23637814-23637833 | MS.gene33763:CDS | 30.0% | |
| CTGAAATGAACAGAAAAAAC+AGG | - | chr4.4:23637386-23637405 | MS.gene33763:CDS | 30.0% | |
| TAAAGGAAATAACTATTCGC+AGG | - | chr4.4:23636774-23636793 | MS.gene33763:CDS | 30.0% | |
| TGAAGTAATGCTAATGAAAC+TGG | + | chr4.4:23637745-23637764 | None:intergenic | 30.0% | |
| TTTAAACTCTCGGAAAATGA+TGG | - | chr4.4:23637838-23637857 | MS.gene33763:CDS | 30.0% | |
| ! | ATTAACCGGTTTAAAAGAAG+GGG | - | chr4.4:23637444-23637463 | MS.gene33763:CDS | 30.0% |
| ! | CATTAACCGGTTTAAAAGAA+GGG | - | chr4.4:23637443-23637462 | MS.gene33763:CDS | 30.0% |
| ! | GGATCTAATCTTTTCTTTAG+AGG | + | chr4.4:23636149-23636168 | None:intergenic | 30.0% |
| ! | TCAAAGAGAGATGATTTTGT+CGG | - | chr4.4:23636322-23636341 | MS.gene33763:CDS | 30.0% |
| !! | GTTATGATCCATTTTCAAGA+AGG | - | chr4.4:23637473-23637492 | MS.gene33763:CDS | 30.0% |
| !! | TTTGGAAAATTTGCTTTTGG+AGG | - | chr4.4:23635962-23635981 | MS.gene33763:CDS | 30.0% |
| AAAGGAAAGGCAATAATGAC+TGG | - | chr4.4:23636404-23636423 | MS.gene33763:CDS | 35.0% | |
| ACCTACTTTCACTATCACTA+TGG | + | chr4.4:23636655-23636674 | None:intergenic | 35.0% | |
| CTAAAACTGGACCTATCTAT+CGG | - | chr4.4:23636879-23636898 | MS.gene33763:CDS | 35.0% | |
| CTAGTTTATACTGTCGATCA+GGG | + | chr4.4:23636937-23636956 | None:intergenic | 35.0% | |
| GAAACTTGCGAAATGGTTTA+TGG | - | chr4.4:23636799-23636818 | MS.gene33763:CDS | 35.0% | |
| GCATTACTTCATAAGTATGG+TGG | - | chr4.4:23637754-23637773 | MS.gene33763:CDS | 35.0% | |
| GCTATCCTTTCAGGATATAA+AGG | - | chr4.4:23636757-23636776 | MS.gene33763:CDS | 35.0% | |
| GGTGATTACAAAAGAAGAAG+AGG | - | chr4.4:23637889-23637908 | MS.gene33763:CDS | 35.0% | |
| TCAAGAATGCTTCTGAATTG+AGG | - | chr4.4:23637419-23637438 | MS.gene33763:CDS | 35.0% | |
| TGAAGAGGAATATAAGCAGT+GGG | - | chr4.4:23637054-23637073 | MS.gene33763:CDS | 35.0% | |
| TGCTTATATTCCTCTTCAAG+TGG | + | chr4.4:23637052-23637071 | None:intergenic | 35.0% | |
| TGCTTTGTAAGAGTTGGAAT+TGG | - | chr4.4:23636851-23636870 | MS.gene33763:CDS | 35.0% | |
| TTATATTCCTCTTCAAGTGG+AGG | + | chr4.4:23637049-23637068 | None:intergenic | 35.0% | |
| TTCTCAGCAGCAATATTTAG+CGG | + | chr4.4:23637229-23637248 | None:intergenic | 35.0% | |
| TTGAAGAGGAATATAAGCAG+TGG | - | chr4.4:23637053-23637072 | MS.gene33763:CDS | 35.0% | |
| ! | AGAGATGATTTTGTCGGATA+GGG | - | chr4.4:23636328-23636347 | MS.gene33763:CDS | 35.0% |
| ! | CCATTAACCGGTTTAAAAGA+AGG | - | chr4.4:23637442-23637461 | MS.gene33763:CDS | 35.0% |
| ! | CCTTCTTTTAAACCGGTTAA+TGG | + | chr4.4:23637445-23637464 | None:intergenic | 35.0% |
| ! | GGAATTGGTAGATCTAAAAC+TGG | - | chr4.4:23636866-23636885 | MS.gene33763:CDS | 35.0% |
| ! | TCTAGTTTATACTGTCGATC+AGG | + | chr4.4:23636938-23636957 | None:intergenic | 35.0% |
| !! | ATGATCCATTTTCAAGAAGG+TGG | - | chr4.4:23637476-23637495 | MS.gene33763:CDS | 35.0% |
| ACAAGGTAAGAACGATGATG+TGG | - | chr4.4:23637279-23637298 | MS.gene33763:CDS | 40.0% | |
| ACCCAAATCATCATCTCTGT+CGG | + | chr4.4:23636174-23636193 | None:intergenic | 40.0% | |
| ACTATCAACTCCTCGAAGAA+AGG | + | chr4.4:23636827-23636846 | None:intergenic | 40.0% | |
| AGGAAGAAGCAGATGATGAT+GGG | - | chr4.4:23636198-23636217 | MS.gene33763:CDS | 40.0% | |
| ATATTGCTGCTGAGAAGGAT+CGG | - | chr4.4:23637233-23637252 | MS.gene33763:CDS | 40.0% | |
| ATCAAAGCGTGAGAAAGGAA+AGG | - | chr4.4:23636391-23636410 | MS.gene33763:CDS | 40.0% | |
| ATTGCATCAAAGCGTGAGAA+AGG | - | chr4.4:23636386-23636405 | MS.gene33763:CDS | 40.0% | |
| CTTGTCCACCTTCTTGAAAA+TGG | + | chr4.4:23637484-23637503 | None:intergenic | 40.0% | |
| GCCGATATTTGATTCATCAC+TGG | + | chr4.4:23636246-23636265 | None:intergenic | 40.0% | |
| GCTAAATATTGCTGCTGAGA+AGG | - | chr4.4:23637228-23637247 | MS.gene33763:CDS | 40.0% | |
| TAAATGAACTGCGTGCAAAG+AGG | - | chr4.4:23636507-23636526 | MS.gene33763:CDS | 40.0% | |
| TAAGAACGATGATGTGGAAG+TGG | - | chr4.4:23637285-23637304 | MS.gene33763:CDS | 40.0% | |
| TCTACAAAGACGAAGATGAC+AGG | - | chr4.4:23636273-23636292 | MS.gene33763:CDS | 40.0% | |
| TCTGAATTGAGGCCATTAAC+CGG | - | chr4.4:23637430-23637449 | MS.gene33763:CDS | 40.0% | |
| TGTTGCAACACCTAGTGAAA+AGG | - | chr4.4:23637519-23637538 | MS.gene33763:CDS | 40.0% | |
| TTCATTCTTGGCTGACCTAT+CGG | + | chr4.4:23636483-23636502 | None:intergenic | 40.0% | |
| ! | AGATGATGATTTGGGTAGTC+AGG | - | chr4.4:23636178-23636197 | MS.gene33763:CDS | 40.0% |
| ! | GAGAGATGATTTTGTCGGAT+AGG | - | chr4.4:23636327-23636346 | MS.gene33763:CDS | 40.0% |
| ! | GATGATGATAGGGCATTATC+TGG | - | chr4.4:23636725-23636744 | MS.gene33763:CDS | 40.0% |
| ! | GCCATAGTGATAGTGAAAGT+AGG | - | chr4.4:23636651-23636670 | MS.gene33763:CDS | 40.0% |
| ! | GTTGGTTGCTTTGTAAGAGT+TGG | - | chr4.4:23636845-23636864 | MS.gene33763:CDS | 40.0% |
| ! | TGATTCTAGGGACGATGATT+CGG | - | chr4.4:23636076-23636095 | MS.gene33763:CDS | 40.0% |
| ! | TGCATCCCCTTCTTTTAAAC+CGG | + | chr4.4:23637452-23637471 | None:intergenic | 40.0% |
| ! | TGCTGACAGTGATGATGATA+GGG | - | chr4.4:23636715-23636734 | MS.gene33763:CDS | 40.0% |
| ! | TTGCTGACAGTGATGATGAT+AGG | - | chr4.4:23636714-23636733 | MS.gene33763:CDS | 40.0% |
| !! | CATGTATTGACTCTGTCAGT+TGG | - | chr4.4:23637868-23637887 | MS.gene33763:CDS | 40.0% |
| !! | GGAATATAAGCAGTGGGTTA+AGG | - | chr4.4:23637060-23637079 | MS.gene33763:CDS | 40.0% |
| !! | TTCTTCGAGGAGTTGATAGT+TGG | - | chr4.4:23636827-23636846 | MS.gene33763:CDS | 40.0% |
| AAATCATCATCTCTGTCGGC+CGG | + | chr4.4:23636170-23636189 | None:intergenic | 45.0% | |
| AACTCTCGGAAAATGATGGC+AGG | - | chr4.4:23637842-23637861 | MS.gene33763:CDS | 45.0% | |
| AATATTTAGCGGCCTTGACG+AGG | + | chr4.4:23637218-23637237 | None:intergenic | 45.0% | |
| ACAAAGACGAAGATGACAGG+CGG | - | chr4.4:23636276-23636295 | MS.gene33763:CDS | 45.0% | |
| ACGACATGATGGCTCCTATT+CGG | - | chr4.4:23636043-23636062 | MS.gene33763:CDS | 45.0% | |
| AGAAAAAGTCTGCCTCGTCA+AGG | - | chr4.4:23637203-23637222 | MS.gene33763:CDS | 45.0% | |
| AGAGGAACTTGTGATCCAGA+TGG | + | chr4.4:23636131-23636150 | None:intergenic | 45.0% | |
| ATCCAGACATGCAAAGGTGA+AGG | - | chr4.4:23637342-23637361 | MS.gene33763:CDS | 45.0% | |
| ATGCGAGATGATGAAAGTGG+GGG | + | chr4.4:23636440-23636459 | None:intergenic | 45.0% | |
| CAAGAAGGTGGACAAGATCA+AGG | - | chr4.4:23637488-23637507 | MS.gene33763:CDS | 45.0% | |
| CAGGAAGAAGCAGATGATGA+TGG | - | chr4.4:23636197-23636216 | MS.gene33763:CDS | 45.0% | |
| CATGCGAGATGATGAAAGTG+GGG | + | chr4.4:23636441-23636460 | None:intergenic | 45.0% | |
| CTTTGGTGGGGAAAAGTTAC+GGG | + | chr4.4:23636594-23636613 | None:intergenic | 45.0% | |
| GATGTGAAAGACTTGCGCTT+TGG | + | chr4.4:23636611-23636630 | None:intergenic | 45.0% | |
| GCATGCGAGATGATGAAAGT+GGG | + | chr4.4:23636442-23636461 | None:intergenic | 45.0% | |
| GCCGACAGAGATGATGATTT+GGG | - | chr4.4:23636170-23636189 | MS.gene33763:CDS | 45.0% | |
| GCTTTGGTGGGGAAAAGTTA+CGG | + | chr4.4:23636595-23636614 | None:intergenic | 45.0% | |
| GGCAAGACTGCTAGAATTAG+AGG | - | chr4.4:23637318-23637337 | MS.gene33763:CDS | 45.0% | |
| GGTTTAAAAGAAGGGGATGC+AGG | - | chr4.4:23637451-23637470 | MS.gene33763:CDS | 45.0% | |
| GTCGGATAGGGCTTCAAAAA+AGG | - | chr4.4:23636340-23636359 | MS.gene33763:CDS | 45.0% | |
| GTTTATGGAGCCTTTCTTCG+AGG | - | chr4.4:23636814-23636833 | MS.gene33763:CDS | 45.0% | |
| TAGGAGCCTCTCTCAATCTA+CGG | + | chr4.4:23636559-23636578 | None:intergenic | 45.0% | |
| TATGCAAGCAGAAAGCCATC+TGG | - | chr4.4:23636113-23636132 | MS.gene33763:CDS | 45.0% | |
| TGAAAGACTTGCGCTTTGGT+GGG | + | chr4.4:23636607-23636626 | None:intergenic | 45.0% | |
| ! | AAAGCAGCAGCCTTTTCACT+AGG | + | chr4.4:23637532-23637551 | None:intergenic | 45.0% |
| ! | AGCGATTTGGAAAGAGCACA+AGG | - | chr4.4:23637262-23637281 | MS.gene33763:CDS | 45.0% |
| ! | AGGGCATTATCTGGATCTGA+GGG | - | chr4.4:23636734-23636753 | MS.gene33763:CDS | 45.0% |
| ! | AGGTCTCACAGTGATGATGA+AGG | - | chr4.4:23636671-23636690 | MS.gene33763:CDS | 45.0% |
| ! | AGTGATGATGAAGGGTCAAC+TGG | - | chr4.4:23636680-23636699 | MS.gene33763:CDS | 45.0% |
| ! | GGTCTCACAGTGATGATGAA+GGG | - | chr4.4:23636672-23636691 | MS.gene33763:CDS | 45.0% |
| ! | GTGATGATGAAGGGTCAACT+GGG | - | chr4.4:23636681-23636700 | MS.gene33763:CDS | 45.0% |
| ! | GTTGGCTTAGTTTCTGATGC+AGG | - | chr4.4:23637565-23637584 | MS.gene33763:CDS | 45.0% |
| ! | TAGGGCATTATCTGGATCTG+AGG | - | chr4.4:23636733-23636752 | MS.gene33763:CDS | 45.0% |
| ! | TGATGATGAAGGGTCAACTG+GGG | - | chr4.4:23636682-23636701 | MS.gene33763:CDS | 45.0% |
| !! | AATTTGCTTTTGGAGGCTGC+AGG | - | chr4.4:23635969-23635988 | MS.gene33763:CDS | 45.0% |
| !! | AGTGGGTTAAGGAAGTGGAA+CGG | - | chr4.4:23637071-23637090 | MS.gene33763:CDS | 45.0% |
| !! | TAAGCAGTGGGTTAAGGAAG+TGG | - | chr4.4:23637066-23637085 | MS.gene33763:CDS | 45.0% |
| AAATCCTGCCTGAGCTCCTT+GGG | + | chr4.4:23637782-23637801 | None:intergenic | 50.0% | |
| ACCATGCAGAGCCGATAGAT+AGG | + | chr4.4:23636893-23636912 | None:intergenic | 50.0% | |
| ACGATGATGTGGAAGTGGAG+AGG | - | chr4.4:23637290-23637309 | MS.gene33763:CDS | 50.0% | |
| AGGAGCTCAGGCAGGATTTA+TGG | - | chr4.4:23637783-23637802 | MS.gene33763:CDS | 50.0% | |
| ATACTGTCGATCAGGGTCTG+AGG | + | chr4.4:23636930-23636949 | None:intergenic | 50.0% | |
| ATCACTCCCACCATCCGAAT+AGG | + | chr4.4:23636060-23636079 | None:intergenic | 50.0% | |
| ATCTGAGGGGCTATCCTTTC+AGG | - | chr4.4:23636748-23636767 | MS.gene33763:CDS | 50.0% | |
| ATGGCTCCTATTCGGATGGT+GGG | - | chr4.4:23636051-23636070 | MS.gene33763:CDS | 50.0% | |
| CATGATGGCTCCTATTCGGA+TGG | - | chr4.4:23636047-23636066 | MS.gene33763:CDS | 50.0% | |
| CGCATGCGAGATGATGAAAG+TGG | + | chr4.4:23636443-23636462 | None:intergenic | 50.0% | |
| CTGCTGAGAAGGATCGGTTA+AGG | - | chr4.4:23637239-23637258 | MS.gene33763:CDS | 50.0% | |
| GAAAGACTTGCGCTTTGGTG+GGG | + | chr4.4:23636606-23636625 | None:intergenic | 50.0% | |
| GAAATGAAAGCTCTGCTGCG+AGG | - | chr4.4:23636996-23637015 | MS.gene33763:CDS | 50.0% | |
| GCAGGTCGAAACTTGCGAAA+TGG | - | chr4.4:23636792-23636811 | MS.gene33763:CDS | 50.0% | |
| GGATCGGTTAAGGAGCGATT+TGG | - | chr4.4:23637249-23637268 | MS.gene33763:CDS | 50.0% | |
| GGCCGACAGAGATGATGATT+TGG | - | chr4.4:23636169-23636188 | MS.gene33763:CDS | 50.0% | |
| GGGCATTATCTGGATCTGAG+GGG | - | chr4.4:23636735-23636754 | MS.gene33763:CDS | 50.0% | |
| GTCCTTCACCTTTGCATGTC+TGG | + | chr4.4:23637347-23637366 | None:intergenic | 50.0% | |
| GTGAAAGACTTGCGCTTTGG+TGG | + | chr4.4:23636608-23636627 | None:intergenic | 50.0% | |
| GTTAAGGAAGTGGAACGGAG+TGG | - | chr4.4:23637076-23637095 | MS.gene33763:CDS | 50.0% | |
| TAAATCCTGCCTGAGCTCCT+TGG | + | chr4.4:23637783-23637802 | None:intergenic | 50.0% | |
| TCCAACACATCCTGCTTGCT+GGG | + | chr4.4:23637112-23637131 | None:intergenic | 50.0% | |
| TGCGAGATGATGAAAGTGGG+GGG | + | chr4.4:23636439-23636458 | None:intergenic | 50.0% | |
| TGCTGATGCTGGAAAGTTGG+TGG | - | chr4.4:23637660-23637679 | MS.gene33763:CDS | 50.0% | |
| TGCTGCTGATGCTGGAAAGT+TGG | - | chr4.4:23637657-23637676 | MS.gene33763:CDS | 50.0% | |
| TGTGGAAGTGGAGAGGATCA+AGG | - | chr4.4:23637297-23637316 | MS.gene33763:CDS | 50.0% | |
| TTCAGCCAGCTTCAGAGCTT+TGG | + | chr4.4:23637371-23637390 | None:intergenic | 50.0% | |
| ! | CATAAGTATGGTGGAGCCCA+AGG | - | chr4.4:23637763-23637782 | MS.gene33763:CDS | 50.0% |
| !! | ACCTATCTATCGGCTCTGCA+TGG | - | chr4.4:23636889-23636908 | MS.gene33763:CDS | 50.0% |
| !! | AGAGGCATCCAGACATGCAA+AGG | - | chr4.4:23637336-23637355 | MS.gene33763:CDS | 50.0% |
| !! | GGATGGTGGGAGTGATTCTA+GGG | - | chr4.4:23636064-23636083 | MS.gene33763:CDS | 50.0% |
| AAGGAAGTGGAACGGAGTGG+TGG | - | chr4.4:23637079-23637098 | MS.gene33763:CDS | 55.0% | |
| AGAGAGGCTCCTAGAAGCTC+AGG | - | chr4.4:23636566-23636585 | MS.gene33763:CDS | 55.0% | |
| AGCAGCAGCTTCCAAGGCAA+TGG | + | chr4.4:23637644-23637663 | None:intergenic | 55.0% | |
| AGCATCAGCAGCAGCTTCCA+AGG | + | chr4.4:23637650-23637669 | None:intergenic | 55.0% | |
| AGCTCGCCGTAGATTGAGAG+AGG | - | chr4.4:23636550-23636569 | MS.gene33763:CDS | 55.0% | |
| ATGAAAGCTCTGCTGCGAGG+TGG | - | chr4.4:23636999-23637018 | MS.gene33763:CDS | 55.0% | |
| CAGGAAGAACTGGTGCAGCT+GGG | - | chr4.4:23635988-23636007 | MS.gene33763:CDS | 55.0% | |
| CATCTGCCAGATCTGCCGAT+AGG | - | chr4.4:23636465-23636484 | MS.gene33763:CDS | 55.0% | |
| CATGTCGTCTCCTCGAAGGT+GGG | + | chr4.4:23636031-23636050 | None:intergenic | 55.0% | |
| CCATCATGTCGTCTCCTCGA+AGG | + | chr4.4:23636035-23636054 | None:intergenic | 55.0% | |
| CCTTCGAGGAGACGACATGA+TGG | - | chr4.4:23636032-23636051 | MS.gene33763:CDS | 55.0% | |
| CGACTCTCCTCCACTTGAAG+AGG | - | chr4.4:23637039-23637058 | MS.gene33763:CDS | 55.0% | |
| CTCAATCTACGGCGAGCTTC+TGG | + | chr4.4:23636548-23636567 | None:intergenic | 55.0% | |
| CTGGTGCAGCTGGGAGAAAT+CGG | - | chr4.4:23635997-23636016 | MS.gene33763:CDS | 55.0% | |
| GAGAGGCTCCTAGAAGCTCA+GGG | - | chr4.4:23636567-23636586 | MS.gene33763:CDS | 55.0% | |
| GATGAAGGGTCAACTGGGGA+TGG | - | chr4.4:23636686-23636705 | MS.gene33763:CDS | 55.0% | |
| GATGGCTCCTATTCGGATGG+TGG | - | chr4.4:23636050-23636069 | MS.gene33763:CDS | 55.0% | |
| GATTCCGTCCCTTGATCCAC+CGG | + | chr4.4:23637697-23637716 | None:intergenic | 55.0% | |
| GCGAGATGATGAAAGTGGGG+GGG | + | chr4.4:23636438-23636457 | None:intergenic | 55.0% | |
| GTCCAACACATCCTGCTTGC+TGG | + | chr4.4:23637113-23637132 | None:intergenic | 55.0% | |
| GTTTCTGATGCAGGCGCCAA+CGG | - | chr4.4:23637574-23637593 | MS.gene33763:CDS | 55.0% | |
| TACCGGTACTCCAGTTCCGT+TGG | + | chr4.4:23637593-23637612 | None:intergenic | 55.0% | |
| TCATGTCGTCTCCTCGAAGG+TGG | + | chr4.4:23636032-23636051 | None:intergenic | 55.0% | |
| TTACGGGACCCTGAGCTTCT+AGG | + | chr4.4:23636578-23636597 | None:intergenic | 55.0% | |
| TTGGAAGCTGCTGCTGATGC+TGG | - | chr4.4:23637649-23637668 | MS.gene33763:CDS | 55.0% | |
| TTGGAGGCTGCAGGAAGAAC+TGG | - | chr4.4:23635978-23635997 | MS.gene33763:CDS | 55.0% | |
| ! | GTACCGGTAACTGCAGAGTC+TGG | - | chr4.4:23637604-23637623 | MS.gene33763:CDS | 55.0% |
| ! | GTTGGTGGATACGAGTGCTC+CGG | - | chr4.4:23637675-23637694 | MS.gene33763:CDS | 55.0% |
| !! | CGGATGGTGGGAGTGATTCT+AGG | - | chr4.4:23636063-23636082 | MS.gene33763:CDS | 55.0% |
| AAGTGGAACGGAGTGGTGGC+CGG | - | chr4.4:23637083-23637102 | MS.gene33763:CDS | 60.0% | |
| ACGAGTGCTCCGGTGGATCA+AGG | - | chr4.4:23637685-23637704 | MS.gene33763:CDS | 60.0% | |
| CGAGTGCTCCGGTGGATCAA+GGG | - | chr4.4:23637686-23637705 | MS.gene33763:CDS | 60.0% | |
| CGCCAACGGAACTGGAGTAC+CGG | - | chr4.4:23637588-23637607 | MS.gene33763:CDS | 60.0% | |
| CTCTGCTGCGAGGTGGCAAA+TGG | - | chr4.4:23637006-23637025 | MS.gene33763:CDS | 60.0% | |
| GAAGGGTCAACTGGGGATGG+AGG | - | chr4.4:23636689-23636708 | MS.gene33763:CDS | 60.0% | |
| GATGGGCGAAGCGATCGTGA+AGG | - | chr4.4:23636215-23636234 | MS.gene33763:CDS | 60.0% | |
| GCAGGAAGAACTGGTGCAGC+TGG | - | chr4.4:23635987-23636006 | MS.gene33763:CDS | 60.0% | |
| GCCCAGCAAGCAGGATGTGT+TGG | - | chr4.4:23637108-23637127 | MS.gene33763:CDS | 60.0% | |
| GCGCCAGACTCTGCAGTTAC+CGG | + | chr4.4:23637610-23637629 | None:intergenic | 60.0% | |
| GGCTGACCTATCGGCAGATC+TGG | + | chr4.4:23636474-23636493 | None:intergenic | 60.0% | |
| GGTAACTGCAGAGTCTGGCG+CGG | - | chr4.4:23637609-23637628 | MS.gene33763:CDS | 60.0% | |
| GGTGGCTACTGCCATTGCCT+TGG | - | chr4.4:23637630-23637649 | MS.gene33763:CDS | 60.0% | |
| TGCTCCGGTGGATCAAGGGA+CGG | - | chr4.4:23637690-23637709 | MS.gene33763:CDS | 60.0% | |
| ! | CATCCTGCTTGCTGGGCATC+CGG | + | chr4.4:23637105-23637124 | None:intergenic | 60.0% |
| !! | GGACGCCAAAGCTCTGAAGC+TGG | - | chr4.4:23637363-23637382 | MS.gene33763:CDS | 60.0% |
| AACTGCAGAGTCTGGCGCGG+TGG | - | chr4.4:23637612-23637631 | MS.gene33763:CDS | 65.0% | |
| GATGCAGGCGCCAACGGAAC+TGG | - | chr4.4:23637580-23637599 | MS.gene33763:CDS | 65.0% | |
| GGCACTCTCTCCCACCTTCG+AGG | - | chr4.4:23636018-23636037 | MS.gene33763:CDS | 65.0% | |
| GGTGGATACGAGTGCTCCGG+TGG | - | chr4.4:23637678-23637697 | MS.gene33763:CDS | 65.0% | |
| TGGTGGAGCCCAAGGAGCTC+AGG | - | chr4.4:23637771-23637790 | MS.gene33763:CDS | 65.0% | |
| GGAGCCCAAGGAGCTCAGGC+AGG | - | chr4.4:23637775-23637794 | MS.gene33763:CDS | 70.0% | |
| TGGCCGGATGCCCAGCAAGC+AGG | - | chr4.4:23637099-23637118 | MS.gene33763:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 23635954 | 23637921 | 23635954 | ID=MS.gene33763 |
| chr4.4 | mRNA | 23635954 | 23637921 | 23635954 | ID=MS.gene33763.t1;Parent=MS.gene33763 |
| chr4.4 | exon | 23635954 | 23637921 | 23635954 | ID=MS.gene33763.t1.exon1;Parent=MS.gene33763.t1 |
| chr4.4 | CDS | 23635954 | 23637921 | 23635954 | ID=cds.MS.gene33763.t1;Parent=MS.gene33763.t1 |
| Gene Sequence |
| Protein sequence |
