Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40620.t1 | XP_003591073.1 | 94.9 | 331 | 15 | 2 | 1 | 330 | 1 | 330 | 1.70E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40620.t1 | Q8RXX9 | 49.5 | 329 | 133 | 10 | 17 | 340 | 16 | 316 | 7.7e-69 | 262.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40620.t1 | G7I803 | 94.9 | 331 | 15 | 2 | 1 | 330 | 1 | 330 | 1.2e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene40620 | 0.82981 | 4.18E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene40620 | 0.848535 | 5.76E-60 | -1.69E-46 |
| MS.gene05015 | MS.gene40620 | 0.820369 | 7.11E-53 | -1.69E-46 |
| MS.gene050309 | MS.gene40620 | 0.852773 | 3.70E-61 | -1.69E-46 |
| MS.gene050363 | MS.gene40620 | 0.847112 | 1.42E-59 | -1.69E-46 |
| MS.gene050883 | MS.gene40620 | 0.830416 | 2.97E-55 | -1.69E-46 |
| MS.gene050961 | MS.gene40620 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene051959 | MS.gene40620 | 0.829394 | 5.28E-55 | -1.69E-46 |
| MS.gene051960 | MS.gene40620 | 0.833355 | 5.59E-56 | -1.69E-46 |
| MS.gene052053 | MS.gene40620 | 0.866976 | 1.92E-65 | -1.69E-46 |
| MS.gene052089 | MS.gene40620 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene40620 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene40620 | 0.802109 | 6.56E-49 | -1.69E-46 |
| MS.gene053932 | MS.gene40620 | 0.848252 | 6.90E-60 | -1.69E-46 |
| MS.gene054056 | MS.gene40620 | 0.812261 | 4.63E-51 | -1.69E-46 |
| MS.gene054959 | MS.gene40620 | 0.807538 | 4.81E-50 | -1.69E-46 |
| MS.gene055549 | MS.gene40620 | 0.977912 | 9.75E-145 | -1.69E-46 |
| MS.gene055550 | MS.gene40620 | 0.987324 | 7.56E-170 | -1.69E-46 |
| MS.gene055551 | MS.gene40620 | 0.930847 | 9.01E-94 | -1.69E-46 |
| MS.gene055942 | MS.gene40620 | 0.810771 | 9.77E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene40620 | 0.816934 | 4.28E-52 | -1.69E-46 |
| MS.gene056365 | MS.gene40620 | 0.846752 | 1.78E-59 | -1.69E-46 |
| MS.gene056530 | MS.gene40620 | 0.835989 | 1.22E-56 | -1.69E-46 |
| MS.gene056761 | MS.gene40620 | 0.818065 | 2.38E-52 | -1.69E-46 |
| MS.gene057001 | MS.gene40620 | 0.837734 | 4.36E-57 | -1.69E-46 |
| MS.gene057093 | MS.gene40620 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene057226 | MS.gene40620 | 0.806102 | 9.68E-50 | -1.69E-46 |
| MS.gene058493 | MS.gene40620 | 0.842217 | 2.96E-58 | -1.69E-46 |
| MS.gene058494 | MS.gene40620 | 0.824646 | 7.21E-54 | -1.69E-46 |
| MS.gene058628 | MS.gene40620 | 0.883764 | 3.40E-71 | -1.69E-46 |
| MS.gene058629 | MS.gene40620 | 0.861895 | 7.44E-64 | -1.69E-46 |
| MS.gene058630 | MS.gene40620 | 0.881265 | 2.77E-70 | -1.69E-46 |
| MS.gene059690 | MS.gene40620 | 0.806213 | 9.18E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene40620 | 0.804223 | 2.39E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene40620 | 0.800998 | 1.11E-48 | -1.69E-46 |
| MS.gene06023 | MS.gene40620 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene060964 | MS.gene40620 | 0.820612 | 6.26E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40620 | MS.gene028573 | PPI |
| MS.gene40160 | MS.gene40620 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40620.t1 | MTR_1g082550 | 93.472 | 337 | 20 | 2 | 1 | 336 | 1 | 336 | 0.0 | 632 |
| MS.gene40620.t1 | MTR_7g113800 | 64.423 | 312 | 97 | 6 | 30 | 341 | 26 | 323 | 3.63e-139 | 399 |
| MS.gene40620.t1 | MTR_3g099650 | 45.255 | 274 | 135 | 6 | 47 | 312 | 58 | 324 | 2.18e-66 | 214 |
| MS.gene40620.t1 | MTR_5g064980 | 43.463 | 283 | 139 | 7 | 47 | 309 | 53 | 334 | 1.77e-58 | 194 |
| MS.gene40620.t1 | MTR_5g064990 | 39.928 | 278 | 163 | 3 | 28 | 304 | 44 | 318 | 8.41e-54 | 181 |
| MS.gene40620.t1 | MTR_6g055030 | 35.714 | 280 | 171 | 4 | 1 | 280 | 6 | 276 | 1.55e-47 | 163 |
| MS.gene40620.t1 | MTR_3g086730 | 36.574 | 216 | 114 | 7 | 48 | 262 | 1 | 194 | 2.99e-36 | 131 |
| MS.gene40620.t1 | MTR_3g086700 | 32.877 | 219 | 116 | 4 | 48 | 266 | 1 | 188 | 2.11e-35 | 127 |
| MS.gene40620.t1 | MTR_6g055030 | 31.071 | 280 | 153 | 5 | 1 | 280 | 6 | 245 | 1.37e-31 | 120 |
| MS.gene40620.t1 | MTR_3g110190 | 42.308 | 130 | 67 | 3 | 44 | 168 | 8 | 134 | 1.18e-29 | 116 |
| MS.gene40620.t1 | MTR_5g076990 | 36.207 | 232 | 126 | 8 | 53 | 272 | 39 | 260 | 4.38e-29 | 114 |
| MS.gene40620.t1 | MTR_8g066740 | 39.614 | 207 | 105 | 7 | 81 | 272 | 58 | 259 | 2.25e-28 | 112 |
| MS.gene40620.t1 | MTR_2g055790 | 40.000 | 145 | 70 | 3 | 30 | 174 | 21 | 148 | 3.17e-28 | 109 |
| MS.gene40620.t1 | MTR_6g087150 | 31.776 | 214 | 122 | 7 | 10 | 212 | 8 | 208 | 1.46e-26 | 108 |
| MS.gene40620.t1 | MTR_4g106680 | 36.747 | 166 | 85 | 4 | 22 | 171 | 16 | 177 | 1.74e-26 | 107 |
| MS.gene40620.t1 | MTR_4g120270 | 47.423 | 97 | 45 | 2 | 95 | 190 | 78 | 169 | 1.69e-23 | 98.6 |
| MS.gene40620.t1 | MTR_2g436100 | 56.962 | 79 | 31 | 1 | 96 | 174 | 92 | 167 | 3.01e-23 | 98.2 |
| MS.gene40620.t1 | MTR_5g066250 | 39.695 | 131 | 73 | 3 | 46 | 174 | 82 | 208 | 3.78e-23 | 100 |
| MS.gene40620.t1 | MTR_3g100400 | 50.000 | 82 | 38 | 1 | 93 | 174 | 126 | 204 | 2.12e-22 | 97.8 |
| MS.gene40620.t1 | MTR_4g129420 | 41.176 | 136 | 72 | 2 | 43 | 172 | 57 | 190 | 2.26e-22 | 98.2 |
| MS.gene40620.t1 | MTR_5g064890 | 36.416 | 173 | 75 | 6 | 32 | 172 | 31 | 200 | 2.39e-22 | 96.7 |
| MS.gene40620.t1 | MTR_1g100737 | 43.158 | 95 | 50 | 2 | 81 | 171 | 74 | 168 | 3.11e-22 | 93.2 |
| MS.gene40620.t1 | MTR_5g034790 | 33.721 | 172 | 89 | 5 | 22 | 174 | 25 | 190 | 3.57e-21 | 93.6 |
| MS.gene40620.t1 | MTR_8g009190 | 34.532 | 139 | 85 | 2 | 44 | 177 | 19 | 156 | 1.85e-20 | 90.9 |
| MS.gene40620.t1 | MTR_2g090950 | 38.614 | 101 | 59 | 1 | 94 | 191 | 88 | 188 | 1.97e-20 | 89.4 |
| MS.gene40620.t1 | MTR_1g043410 | 32.414 | 145 | 86 | 2 | 34 | 168 | 23 | 165 | 2.84e-20 | 90.5 |
| MS.gene40620.t1 | MTR_7g116220 | 32.867 | 143 | 86 | 2 | 42 | 174 | 5 | 147 | 5.74e-20 | 86.7 |
| MS.gene40620.t1 | MTR_8g093010 | 34.722 | 144 | 83 | 5 | 32 | 172 | 45 | 180 | 7.17e-20 | 87.4 |
| MS.gene40620.t1 | MTR_3g094000 | 33.540 | 161 | 86 | 6 | 30 | 175 | 14 | 168 | 1.08e-19 | 85.5 |
| MS.gene40620.t1 | MTR_1g074190 | 48.101 | 79 | 38 | 1 | 96 | 171 | 98 | 176 | 1.16e-19 | 89.0 |
| MS.gene40620.t1 | MTR_3g464780 | 46.988 | 83 | 43 | 1 | 91 | 172 | 96 | 178 | 1.43e-19 | 87.4 |
| MS.gene40620.t1 | MTR_6g007737 | 34.266 | 143 | 76 | 4 | 43 | 171 | 66 | 204 | 1.65e-19 | 89.0 |
| MS.gene40620.t1 | MTR_5g030010 | 32.624 | 141 | 78 | 2 | 45 | 171 | 56 | 193 | 2.01e-19 | 88.6 |
| MS.gene40620.t1 | MTR_7g117540 | 35.099 | 151 | 79 | 3 | 30 | 171 | 6 | 146 | 3.25e-19 | 87.0 |
| MS.gene40620.t1 | MTR_2g009310 | 52.439 | 82 | 30 | 2 | 97 | 175 | 135 | 210 | 4.43e-19 | 87.8 |
| MS.gene40620.t1 | MTR_8g066780 | 32.168 | 143 | 88 | 4 | 45 | 180 | 56 | 196 | 1.12e-18 | 86.3 |
| MS.gene40620.t1 | MTR_1g090480 | 30.282 | 142 | 92 | 3 | 34 | 173 | 13 | 149 | 1.88e-18 | 82.0 |
| MS.gene40620.t1 | MTR_8g089880 | 48.148 | 81 | 39 | 2 | 97 | 177 | 127 | 204 | 1.96e-18 | 84.3 |
| MS.gene40620.t1 | MTR_1g056350 | 39.241 | 79 | 48 | 0 | 97 | 175 | 74 | 152 | 2.25e-18 | 81.6 |
| MS.gene40620.t1 | MTR_4g093830 | 43.878 | 98 | 52 | 2 | 97 | 194 | 126 | 220 | 2.92e-18 | 85.1 |
| MS.gene40620.t1 | MTR_2g090905 | 38.636 | 88 | 51 | 1 | 98 | 182 | 40 | 127 | 4.82e-18 | 79.7 |
| MS.gene40620.t1 | MTR_8g092840 | 32.653 | 147 | 88 | 5 | 33 | 172 | 44 | 186 | 5.00e-18 | 82.4 |
| MS.gene40620.t1 | MTR_8g092960 | 30.323 | 155 | 105 | 2 | 19 | 172 | 24 | 176 | 6.23e-18 | 81.6 |
| MS.gene40620.t1 | MTR_4g056590 | 44.156 | 77 | 37 | 1 | 96 | 172 | 99 | 169 | 7.28e-18 | 81.3 |
| MS.gene40620.t1 | MTR_5g026720 | 31.447 | 159 | 88 | 6 | 31 | 180 | 1 | 147 | 1.21e-17 | 79.3 |
| MS.gene40620.t1 | MTR_8g063660 | 48.684 | 76 | 34 | 2 | 97 | 171 | 68 | 139 | 1.32e-17 | 82.8 |
| MS.gene40620.t1 | MTR_5g026730 | 32.394 | 142 | 82 | 4 | 42 | 175 | 8 | 143 | 1.77e-17 | 79.3 |
| MS.gene40620.t1 | MTR_8g073120 | 34.043 | 141 | 68 | 5 | 38 | 169 | 17 | 141 | 1.79e-17 | 80.1 |
| MS.gene40620.t1 | MTR_7g073200 | 34.839 | 155 | 83 | 7 | 35 | 182 | 19 | 162 | 2.11e-17 | 79.3 |
| MS.gene40620.t1 | MTR_2g044570 | 45.833 | 72 | 39 | 0 | 106 | 177 | 63 | 134 | 2.21e-17 | 81.6 |
| MS.gene40620.t1 | MTR_5g024730 | 32.031 | 128 | 66 | 4 | 48 | 168 | 34 | 147 | 2.58e-17 | 80.1 |
| MS.gene40620.t1 | MTR_1g070140 | 30.435 | 138 | 82 | 4 | 46 | 171 | 40 | 175 | 3.01e-17 | 82.0 |
| MS.gene40620.t1 | MTR_8g092930 | 31.034 | 145 | 94 | 3 | 32 | 172 | 43 | 185 | 5.72e-17 | 79.3 |
| MS.gene40620.t1 | MTR_7g116180 | 44.872 | 78 | 43 | 0 | 94 | 171 | 64 | 141 | 6.93e-17 | 77.8 |
| MS.gene40620.t1 | MTR_1g070425 | 44.872 | 78 | 43 | 0 | 94 | 171 | 65 | 142 | 8.06e-17 | 77.8 |
| MS.gene40620.t1 | MTR_3g091620 | 46.053 | 76 | 38 | 1 | 97 | 172 | 101 | 173 | 1.18e-16 | 80.5 |
| MS.gene40620.t1 | MTR_3g071300 | 27.778 | 126 | 90 | 1 | 52 | 176 | 31 | 156 | 1.52e-16 | 77.0 |
| MS.gene40620.t1 | MTR_1g492830 | 32.278 | 158 | 88 | 6 | 47 | 187 | 3 | 158 | 2.15e-16 | 77.8 |
| MS.gene40620.t1 | MTR_8g023400 | 47.368 | 76 | 35 | 2 | 97 | 172 | 92 | 162 | 2.22e-16 | 79.3 |
| MS.gene40620.t1 | MTR_3g095560 | 31.973 | 147 | 86 | 6 | 48 | 190 | 63 | 199 | 3.04e-16 | 77.4 |
| MS.gene40620.t1 | MTR_6g007680 | 31.496 | 127 | 76 | 3 | 53 | 179 | 4 | 119 | 3.09e-16 | 75.5 |
| MS.gene40620.t1 | MTR_7g079280 | 39.024 | 82 | 49 | 1 | 94 | 175 | 77 | 157 | 4.03e-16 | 75.9 |
| MS.gene40620.t1 | MTR_5g092790 | 40.541 | 74 | 43 | 1 | 95 | 168 | 155 | 227 | 4.47e-16 | 77.0 |
| MS.gene40620.t1 | MTR_5g082940 | 33.621 | 116 | 66 | 3 | 57 | 171 | 43 | 148 | 4.98e-16 | 75.5 |
| MS.gene40620.t1 | MTR_8g092985 | 29.371 | 143 | 97 | 2 | 32 | 172 | 44 | 184 | 6.16e-16 | 76.3 |
| MS.gene40620.t1 | MTR_3g012550 | 31.429 | 140 | 79 | 6 | 47 | 175 | 24 | 157 | 6.93e-16 | 75.1 |
| MS.gene40620.t1 | MTR_4g063070 | 35.052 | 97 | 52 | 2 | 76 | 172 | 297 | 382 | 7.23e-16 | 78.6 |
| MS.gene40620.t1 | MTR_8g071815 | 40.217 | 92 | 54 | 1 | 123 | 214 | 87 | 177 | 1.00e-15 | 74.7 |
| MS.gene40620.t1 | MTR_5g071930 | 41.772 | 79 | 40 | 1 | 96 | 174 | 65 | 137 | 1.09e-15 | 75.1 |
| MS.gene40620.t1 | MTR_7g096690 | 29.560 | 159 | 92 | 6 | 48 | 191 | 13 | 166 | 1.25e-15 | 77.0 |
| MS.gene40620.t1 | MTR_8g092970 | 31.098 | 164 | 93 | 6 | 19 | 172 | 24 | 177 | 2.20e-15 | 74.7 |
| MS.gene40620.t1 | MTR_5g092750 | 38.462 | 78 | 47 | 1 | 95 | 172 | 155 | 231 | 2.39e-15 | 75.1 |
| MS.gene40620.t1 | MTR_8g032690 | 39.130 | 92 | 54 | 2 | 126 | 217 | 19 | 108 | 3.92e-15 | 70.9 |
| MS.gene40620.t1 | MTR_7g108855 | 40.789 | 76 | 44 | 1 | 98 | 173 | 67 | 141 | 3.93e-15 | 73.6 |
| MS.gene40620.t1 | MTR_7g079290 | 36.145 | 83 | 52 | 1 | 92 | 173 | 120 | 202 | 4.00e-15 | 73.9 |
| MS.gene40620.t1 | MTR_1g090460 | 40.789 | 76 | 44 | 1 | 105 | 179 | 73 | 148 | 4.64e-15 | 72.4 |
| MS.gene40620.t1 | MTR_3g078450 | 44.156 | 77 | 42 | 1 | 95 | 171 | 74 | 149 | 4.75e-15 | 73.6 |
| MS.gene40620.t1 | MTR_7g076250 | 31.746 | 126 | 81 | 3 | 97 | 220 | 63 | 185 | 8.39e-15 | 72.4 |
| MS.gene40620.t1 | MTR_2g041200 | 33.600 | 125 | 80 | 2 | 51 | 173 | 33 | 156 | 1.34e-14 | 71.6 |
| MS.gene40620.t1 | MTR_2g096350 | 38.889 | 72 | 43 | 1 | 98 | 169 | 108 | 178 | 1.65e-14 | 72.0 |
| MS.gene40620.t1 | MTR_8g028465 | 40.506 | 79 | 42 | 2 | 97 | 175 | 90 | 163 | 1.70e-14 | 72.0 |
| MS.gene40620.t1 | MTR_4g030070 | 33.019 | 106 | 67 | 1 | 97 | 202 | 85 | 186 | 1.70e-14 | 72.4 |
| MS.gene40620.t1 | MTR_3g078470 | 44.156 | 77 | 42 | 1 | 95 | 171 | 74 | 149 | 1.88e-14 | 72.0 |
| MS.gene40620.t1 | MTR_8g019710 | 34.483 | 116 | 64 | 4 | 94 | 207 | 27 | 132 | 2.02e-14 | 70.1 |
| MS.gene40620.t1 | MTR_3g116000 | 31.915 | 141 | 82 | 4 | 48 | 183 | 30 | 161 | 2.42e-14 | 71.2 |
| MS.gene40620.t1 | MTR_3g086680 | 47.887 | 71 | 26 | 3 | 107 | 169 | 22 | 89 | 2.55e-14 | 68.9 |
| MS.gene40620.t1 | MTR_3g081030 | 45.070 | 71 | 39 | 0 | 126 | 196 | 119 | 189 | 3.46e-14 | 71.2 |
| MS.gene40620.t1 | MTR_2g035800 | 30.935 | 139 | 82 | 5 | 47 | 182 | 29 | 156 | 5.59e-14 | 69.3 |
| MS.gene40620.t1 | MTR_7g116200 | 36.957 | 92 | 52 | 2 | 79 | 169 | 50 | 136 | 8.07e-14 | 69.3 |
| MS.gene40620.t1 | MTR_3g114500 | 50.000 | 64 | 28 | 2 | 115 | 174 | 56 | 119 | 9.89e-14 | 67.8 |
| MS.gene40620.t1 | MTR_5g022920 | 38.462 | 78 | 47 | 1 | 94 | 171 | 158 | 234 | 1.26e-13 | 70.1 |
| MS.gene40620.t1 | MTR_8g092990 | 43.478 | 69 | 33 | 2 | 106 | 172 | 123 | 187 | 3.46e-13 | 68.6 |
| MS.gene40620.t1 | MTR_8g099515 | 42.667 | 75 | 40 | 2 | 95 | 168 | 307 | 379 | 4.19e-13 | 70.1 |
| MS.gene40620.t1 | MTR_8g027745 | 54.000 | 50 | 23 | 0 | 126 | 175 | 314 | 363 | 6.70e-13 | 69.3 |
| MS.gene40620.t1 | MTR_7g117350 | 38.947 | 95 | 53 | 3 | 93 | 184 | 286 | 378 | 8.15e-13 | 69.3 |
| MS.gene40620.t1 | MTR_1g026070 | 53.061 | 49 | 23 | 0 | 125 | 173 | 70 | 118 | 9.66e-13 | 65.1 |
| MS.gene40620.t1 | MTR_7g117350 | 38.947 | 95 | 53 | 3 | 93 | 184 | 278 | 370 | 9.90e-13 | 68.9 |
| MS.gene40620.t1 | MTR_4g022410 | 33.065 | 124 | 73 | 3 | 48 | 171 | 45 | 158 | 1.19e-12 | 66.2 |
| MS.gene40620.t1 | MTR_5g009200 | 43.590 | 78 | 31 | 2 | 97 | 168 | 322 | 392 | 1.28e-12 | 68.6 |
| MS.gene40620.t1 | MTR_7g116210 | 40.506 | 79 | 41 | 2 | 92 | 169 | 5 | 78 | 1.81e-12 | 63.9 |
| MS.gene40620.t1 | MTR_6g007670 | 33.333 | 93 | 55 | 3 | 87 | 179 | 1 | 86 | 2.88e-12 | 66.2 |
| MS.gene40620.t1 | MTR_6g007670 | 31.765 | 85 | 54 | 2 | 96 | 179 | 144 | 225 | 8.53e-11 | 62.0 |
| MS.gene40620.t1 | MTR_5g009210 | 43.590 | 78 | 31 | 2 | 97 | 168 | 287 | 357 | 4.01e-12 | 67.0 |
| MS.gene40620.t1 | MTR_3g091200 | 37.838 | 74 | 45 | 1 | 97 | 170 | 303 | 375 | 4.13e-12 | 67.0 |
| MS.gene40620.t1 | MTR_2g079320 | 37.313 | 67 | 40 | 1 | 107 | 171 | 138 | 204 | 5.85e-12 | 64.7 |
| MS.gene40620.t1 | MTR_8g072020 | 38.889 | 72 | 40 | 3 | 101 | 171 | 383 | 451 | 6.21e-12 | 67.0 |
| MS.gene40620.t1 | MTR_8g072020 | 38.889 | 72 | 40 | 3 | 101 | 171 | 422 | 490 | 6.88e-12 | 66.6 |
| MS.gene40620.t1 | MTR_4g094725 | 29.752 | 121 | 78 | 2 | 48 | 168 | 35 | 148 | 7.86e-12 | 63.2 |
| MS.gene40620.t1 | MTR_5g009190 | 42.308 | 78 | 32 | 2 | 97 | 168 | 266 | 336 | 9.57e-12 | 65.9 |
| MS.gene40620.t1 | MTR_8g098770 | 40.299 | 67 | 39 | 1 | 113 | 178 | 73 | 139 | 1.28e-11 | 62.8 |
| MS.gene40620.t1 | MTR_4g077570 | 45.283 | 53 | 25 | 2 | 124 | 173 | 9 | 60 | 1.33e-11 | 60.5 |
| MS.gene40620.t1 | MTR_4g108830 | 47.826 | 46 | 24 | 0 | 126 | 171 | 146 | 191 | 1.35e-11 | 63.2 |
| MS.gene40620.t1 | MTR_8g027980 | 38.889 | 72 | 40 | 2 | 102 | 171 | 95 | 164 | 1.38e-11 | 64.7 |
| MS.gene40620.t1 | MTR_4g108830 | 47.826 | 46 | 24 | 0 | 126 | 171 | 174 | 219 | 1.62e-11 | 63.5 |
| MS.gene40620.t1 | MTR_3g087900 | 50.000 | 50 | 23 | 2 | 125 | 173 | 68 | 116 | 1.72e-11 | 62.4 |
| MS.gene40620.t1 | MTR_7g059360 | 36.842 | 76 | 47 | 1 | 103 | 178 | 136 | 210 | 1.76e-11 | 63.9 |
| MS.gene40620.t1 | MTR_3g078120 | 34.409 | 93 | 53 | 2 | 77 | 169 | 44 | 128 | 2.48e-11 | 61.6 |
| MS.gene40620.t1 | MTR_8g074900 | 51.111 | 45 | 22 | 0 | 124 | 168 | 178 | 222 | 2.49e-11 | 63.2 |
| MS.gene40620.t1 | MTR_1g090450 | 31.200 | 125 | 77 | 4 | 51 | 168 | 27 | 149 | 3.89e-11 | 61.2 |
| MS.gene40620.t1 | MTR_8g099495 | 38.158 | 76 | 38 | 2 | 97 | 168 | 319 | 389 | 3.90e-11 | 64.3 |
| MS.gene40620.t1 | MTR_5g010100 | 46.000 | 50 | 26 | 1 | 126 | 174 | 81 | 130 | 4.20e-11 | 60.5 |
| MS.gene40620.t1 | MTR_3g078540 | 36.905 | 84 | 49 | 2 | 89 | 170 | 42 | 123 | 4.56e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40620.t1 | AT3G05200 | 49.405 | 336 | 137 | 11 | 13 | 343 | 12 | 319 | 2.32e-88 | 271 |
| MS.gene40620.t1 | AT5G27420 | 47.000 | 300 | 103 | 10 | 39 | 336 | 36 | 281 | 2.67e-71 | 226 |
| MS.gene40620.t1 | AT1G72200 | 44.674 | 291 | 134 | 9 | 24 | 305 | 37 | 309 | 6.08e-71 | 226 |
| MS.gene40620.t1 | AT1G22500 | 43.431 | 274 | 139 | 6 | 37 | 305 | 28 | 290 | 1.69e-62 | 204 |
| MS.gene40620.t1 | AT1G35330 | 39.172 | 314 | 168 | 9 | 11 | 314 | 9 | 309 | 6.43e-54 | 180 |
| MS.gene40620.t1 | AT4G09120 | 44.238 | 269 | 116 | 11 | 49 | 313 | 50 | 288 | 1.06e-51 | 175 |
| MS.gene40620.t1 | AT4G40070 | 38.567 | 293 | 134 | 12 | 45 | 328 | 43 | 298 | 1.44e-51 | 174 |
| MS.gene40620.t1 | AT4G09130 | 38.558 | 319 | 162 | 9 | 11 | 318 | 12 | 307 | 1.17e-50 | 172 |
| MS.gene40620.t1 | AT2G35000 | 42.449 | 245 | 116 | 8 | 48 | 277 | 51 | 285 | 2.60e-50 | 172 |
| MS.gene40620.t1 | AT2G34990 | 42.857 | 238 | 99 | 8 | 50 | 276 | 38 | 249 | 6.25e-49 | 167 |
| MS.gene40620.t1 | AT2G34990 | 42.437 | 238 | 100 | 7 | 50 | 276 | 16 | 227 | 6.62e-49 | 166 |
| MS.gene40620.t1 | AT4G09110 | 38.710 | 217 | 74 | 4 | 93 | 309 | 90 | 247 | 4.17e-39 | 140 |
| MS.gene40620.t1 | AT4G17920 | 31.469 | 286 | 167 | 8 | 44 | 315 | 19 | 289 | 4.07e-36 | 132 |
| MS.gene40620.t1 | AT5G46650 | 33.205 | 259 | 141 | 7 | 33 | 276 | 8 | 249 | 6.65e-36 | 132 |
| MS.gene40620.t1 | AT4G09100 | 56.098 | 82 | 36 | 0 | 92 | 173 | 51 | 132 | 1.73e-27 | 105 |
| MS.gene40620.t1 | AT2G27940 | 36.364 | 143 | 71 | 3 | 44 | 170 | 46 | 184 | 2.18e-27 | 108 |
| MS.gene40620.t1 | AT2G20030 | 41.096 | 146 | 71 | 5 | 46 | 181 | 39 | 179 | 3.36e-25 | 105 |
| MS.gene40620.t1 | AT5G05810 | 35.570 | 149 | 80 | 2 | 39 | 174 | 49 | 194 | 1.11e-24 | 103 |
| MS.gene40620.t1 | AT3G16720 | 35.632 | 174 | 88 | 4 | 25 | 184 | 9 | 172 | 1.16e-23 | 99.8 |
| MS.gene40620.t1 | AT4G28890 | 33.333 | 180 | 99 | 5 | 17 | 179 | 1 | 176 | 5.56e-23 | 99.8 |
| MS.gene40620.t1 | AT1G23980 | 35.616 | 146 | 75 | 3 | 42 | 171 | 47 | 189 | 2.44e-22 | 97.1 |
| MS.gene40620.t1 | AT5G40250 | 27.244 | 312 | 170 | 10 | 42 | 322 | 39 | 324 | 3.74e-22 | 96.7 |
| MS.gene40620.t1 | AT2G18650 | 40.708 | 113 | 65 | 1 | 60 | 172 | 62 | 172 | 4.50e-22 | 97.1 |
| MS.gene40620.t1 | AT2G35420 | 33.333 | 228 | 99 | 10 | 45 | 256 | 18 | 208 | 1.34e-21 | 92.8 |
| MS.gene40620.t1 | AT5G17600 | 36.641 | 131 | 65 | 4 | 51 | 169 | 61 | 185 | 1.61e-21 | 94.7 |
| MS.gene40620.t1 | AT3G62690 | 33.880 | 183 | 100 | 6 | 33 | 206 | 14 | 184 | 1.18e-20 | 90.5 |
| MS.gene40620.t1 | AT1G04360 | 33.333 | 144 | 72 | 3 | 46 | 171 | 42 | 179 | 1.43e-20 | 92.0 |
| MS.gene40620.t1 | AT4G17905 | 31.548 | 168 | 85 | 5 | 44 | 188 | 58 | 218 | 1.60e-20 | 90.9 |
| MS.gene40620.t1 | AT4G17905 | 31.548 | 168 | 85 | 5 | 44 | 188 | 84 | 244 | 2.62e-20 | 90.9 |
| MS.gene40620.t1 | AT1G72220 | 39.855 | 138 | 61 | 6 | 51 | 172 | 92 | 223 | 3.90e-20 | 91.3 |
| MS.gene40620.t1 | AT5G43420 | 29.902 | 204 | 115 | 5 | 46 | 223 | 35 | 236 | 7.59e-20 | 90.1 |
| MS.gene40620.t1 | AT4G15975 | 46.250 | 80 | 39 | 1 | 97 | 176 | 51 | 126 | 9.87e-20 | 87.4 |
| MS.gene40620.t1 | AT1G32361 | 34.356 | 163 | 91 | 4 | 97 | 255 | 130 | 280 | 1.50e-19 | 88.6 |
| MS.gene40620.t1 | AT4G30400 | 52.778 | 72 | 32 | 1 | 97 | 168 | 107 | 176 | 3.48e-19 | 89.0 |
| MS.gene40620.t1 | AT4G33565 | 53.947 | 76 | 32 | 2 | 97 | 172 | 191 | 263 | 4.26e-19 | 87.8 |
| MS.gene40620.t1 | AT2G42360 | 33.871 | 124 | 74 | 2 | 52 | 175 | 42 | 157 | 4.32e-19 | 85.5 |
| MS.gene40620.t1 | AT3G18930 | 50.602 | 83 | 34 | 2 | 97 | 172 | 120 | 202 | 6.53e-19 | 87.4 |
| MS.gene40620.t1 | AT3G18930 | 50.602 | 83 | 34 | 2 | 97 | 172 | 120 | 202 | 6.53e-19 | 87.4 |
| MS.gene40620.t1 | AT3G18930 | 50.602 | 83 | 34 | 2 | 97 | 172 | 120 | 202 | 6.53e-19 | 87.4 |
| MS.gene40620.t1 | AT3G48030 | 49.333 | 75 | 36 | 1 | 97 | 171 | 102 | 174 | 9.53e-19 | 85.1 |
| MS.gene40620.t1 | AT5G05280 | 32.192 | 146 | 75 | 5 | 36 | 172 | 29 | 159 | 1.03e-18 | 82.8 |
| MS.gene40620.t1 | AT3G48030 | 49.333 | 75 | 36 | 1 | 97 | 171 | 180 | 252 | 1.22e-18 | 86.3 |
| MS.gene40620.t1 | AT4G10150 | 34.000 | 150 | 84 | 5 | 36 | 176 | 18 | 161 | 1.31e-18 | 84.3 |
| MS.gene40620.t1 | AT3G10910 | 34.132 | 167 | 85 | 7 | 26 | 175 | 8 | 166 | 2.38e-18 | 82.0 |
| MS.gene40620.t1 | AT1G49200 | 29.730 | 185 | 109 | 6 | 39 | 220 | 50 | 216 | 2.78e-18 | 83.2 |
| MS.gene40620.t1 | AT3G03550 | 31.788 | 151 | 76 | 3 | 46 | 172 | 58 | 205 | 3.15e-18 | 85.1 |
| MS.gene40620.t1 | AT5G01880 | 43.137 | 102 | 48 | 4 | 71 | 172 | 60 | 151 | 4.89e-18 | 80.5 |
| MS.gene40620.t1 | AT4G10160 | 34.375 | 128 | 76 | 3 | 52 | 176 | 25 | 147 | 5.58e-18 | 82.0 |
| MS.gene40620.t1 | AT5G10380 | 44.340 | 106 | 44 | 5 | 97 | 197 | 109 | 204 | 6.74e-18 | 83.6 |
| MS.gene40620.t1 | AT3G18773 | 27.941 | 204 | 123 | 7 | 21 | 220 | 27 | 210 | 7.78e-18 | 81.6 |
| MS.gene40620.t1 | AT2G42350 | 46.988 | 83 | 40 | 2 | 91 | 173 | 69 | 147 | 8.04e-18 | 81.6 |
| MS.gene40620.t1 | AT2G46493 | 37.097 | 124 | 75 | 2 | 47 | 168 | 58 | 180 | 1.24e-17 | 80.1 |
| MS.gene40620.t1 | AT5G57750 | 32.374 | 139 | 78 | 4 | 44 | 170 | 32 | 166 | 1.27e-17 | 80.9 |
| MS.gene40620.t1 | AT1G49230 | 30.556 | 180 | 107 | 7 | 42 | 220 | 50 | 212 | 2.25e-17 | 80.5 |
| MS.gene40620.t1 | AT1G76410 | 36.220 | 127 | 75 | 4 | 48 | 172 | 28 | 150 | 4.41e-17 | 78.6 |
| MS.gene40620.t1 | AT3G60220 | 47.222 | 72 | 38 | 0 | 100 | 171 | 91 | 162 | 4.54e-17 | 81.6 |
| MS.gene40620.t1 | AT2G47560 | 34.000 | 150 | 93 | 4 | 26 | 173 | 10 | 155 | 4.62e-17 | 79.7 |
| MS.gene40620.t1 | AT1G49220 | 30.693 | 202 | 119 | 8 | 27 | 225 | 40 | 223 | 9.27e-17 | 79.3 |
| MS.gene40620.t1 | AT5G07040 | 31.008 | 129 | 84 | 3 | 47 | 174 | 18 | 142 | 1.55e-16 | 76.6 |
| MS.gene40620.t1 | AT2G25410 | 38.542 | 96 | 57 | 2 | 80 | 173 | 279 | 374 | 2.09e-16 | 80.1 |
| MS.gene40620.t1 | AT1G49210 | 34.127 | 126 | 65 | 3 | 96 | 220 | 107 | 215 | 3.26e-16 | 77.4 |
| MS.gene40620.t1 | AT2G34000 | 34.815 | 135 | 80 | 4 | 37 | 168 | 4 | 133 | 3.33e-16 | 75.5 |
| MS.gene40620.t1 | AT1G20823 | 31.973 | 147 | 79 | 6 | 38 | 172 | 20 | 157 | 2.64e-15 | 73.9 |
| MS.gene40620.t1 | AT5G53110 | 39.496 | 119 | 61 | 4 | 58 | 168 | 257 | 372 | 2.69e-15 | 76.6 |
| MS.gene40620.t1 | AT1G53820 | 37.647 | 85 | 48 | 2 | 97 | 181 | 95 | 174 | 3.27e-15 | 75.9 |
| MS.gene40620.t1 | AT3G14320 | 44.444 | 72 | 36 | 1 | 97 | 168 | 63 | 130 | 3.42e-15 | 73.9 |
| MS.gene40620.t1 | AT2G17450 | 32.061 | 131 | 75 | 4 | 48 | 173 | 28 | 149 | 3.66e-15 | 73.2 |
| MS.gene40620.t1 | AT1G72310 | 42.500 | 80 | 42 | 1 | 97 | 172 | 94 | 173 | 4.13e-15 | 75.5 |
| MS.gene40620.t1 | AT5G06490 | 35.714 | 84 | 50 | 1 | 97 | 176 | 96 | 179 | 4.23e-15 | 73.6 |
| MS.gene40620.t1 | AT2G46494 | 43.038 | 79 | 44 | 1 | 90 | 168 | 281 | 358 | 4.77e-15 | 75.9 |
| MS.gene40620.t1 | AT1G28040 | 44.444 | 72 | 39 | 1 | 97 | 168 | 225 | 295 | 4.84e-15 | 75.1 |
| MS.gene40620.t1 | AT2G46160 | 39.130 | 92 | 51 | 1 | 97 | 183 | 104 | 195 | 4.98e-15 | 73.6 |
| MS.gene40620.t1 | AT2G46160 | 39.130 | 92 | 51 | 1 | 97 | 183 | 104 | 195 | 4.98e-15 | 73.6 |
| MS.gene40620.t1 | AT3G61550 | 36.458 | 96 | 51 | 2 | 97 | 183 | 99 | 193 | 5.63e-15 | 73.6 |
| MS.gene40620.t1 | AT2G46495 | 33.099 | 142 | 89 | 4 | 38 | 176 | 230 | 368 | 9.29e-15 | 75.1 |
| MS.gene40620.t1 | AT2G35910 | 40.506 | 79 | 44 | 1 | 97 | 175 | 121 | 196 | 1.52e-14 | 72.4 |
| MS.gene40620.t1 | AT5G58580 | 30.709 | 127 | 86 | 1 | 88 | 214 | 102 | 226 | 2.33e-14 | 73.2 |
| MS.gene40620.t1 | AT2G46495 | 38.298 | 94 | 57 | 1 | 81 | 173 | 246 | 339 | 2.65e-14 | 73.6 |
| MS.gene40620.t1 | AT5G42200 | 57.143 | 49 | 21 | 0 | 125 | 173 | 103 | 151 | 3.96e-14 | 69.7 |
| MS.gene40620.t1 | AT1G33480 | 39.474 | 76 | 44 | 1 | 125 | 198 | 99 | 174 | 4.36e-14 | 71.6 |
| MS.gene40620.t1 | AT4G35480 | 51.852 | 54 | 26 | 0 | 120 | 173 | 107 | 160 | 4.93e-14 | 70.5 |
| MS.gene40620.t1 | AT3G11110 | 25.899 | 139 | 100 | 2 | 33 | 171 | 17 | 152 | 2.18e-13 | 67.8 |
| MS.gene40620.t1 | AT5G47610 | 37.975 | 79 | 47 | 1 | 100 | 178 | 83 | 159 | 2.68e-13 | 67.8 |
| MS.gene40620.t1 | AT5G66070 | 44.828 | 58 | 32 | 0 | 114 | 171 | 164 | 221 | 9.34e-13 | 67.4 |
| MS.gene40620.t1 | AT5G66070 | 44.828 | 58 | 32 | 0 | 114 | 171 | 164 | 221 | 9.34e-13 | 67.4 |
| MS.gene40620.t1 | AT1G74410 | 36.486 | 74 | 44 | 1 | 95 | 168 | 148 | 218 | 1.11e-12 | 67.0 |
| MS.gene40620.t1 | AT5G66070 | 44.828 | 58 | 32 | 0 | 114 | 171 | 188 | 245 | 1.34e-12 | 67.4 |
| MS.gene40620.t1 | AT3G19140 | 37.662 | 77 | 44 | 1 | 95 | 171 | 52 | 124 | 1.59e-12 | 64.7 |
| MS.gene40620.t1 | AT4G35840 | 37.647 | 85 | 39 | 2 | 94 | 171 | 159 | 236 | 1.65e-12 | 67.0 |
| MS.gene40620.t1 | AT3G60966 | 50.943 | 53 | 26 | 0 | 126 | 178 | 62 | 114 | 1.83e-12 | 64.7 |
| MS.gene40620.t1 | AT4G17245 | 33.607 | 122 | 76 | 4 | 57 | 177 | 37 | 154 | 5.97e-12 | 63.9 |
| MS.gene40620.t1 | AT2G18670 | 33.708 | 89 | 52 | 2 | 94 | 177 | 80 | 166 | 7.76e-12 | 63.9 |
| MS.gene40620.t1 | AT2G17730 | 33.333 | 78 | 52 | 0 | 94 | 171 | 164 | 241 | 1.02e-11 | 64.7 |
| MS.gene40620.t1 | AT3G20395 | 40.789 | 76 | 40 | 3 | 96 | 171 | 146 | 216 | 1.40e-11 | 63.9 |
| MS.gene40620.t1 | AT1G35625 | 31.250 | 144 | 81 | 8 | 48 | 189 | 165 | 292 | 1.41e-11 | 65.1 |
| MS.gene40620.t1 | AT5G36001 | 53.488 | 43 | 20 | 0 | 126 | 168 | 264 | 306 | 1.78e-11 | 64.7 |
| MS.gene40620.t1 | AT2G44578 | 48.000 | 50 | 26 | 0 | 126 | 175 | 70 | 119 | 2.55e-11 | 61.6 |
| MS.gene40620.t1 | AT4G24015 | 54.348 | 46 | 21 | 0 | 126 | 171 | 105 | 150 | 2.68e-11 | 62.0 |
| MS.gene40620.t1 | AT3G30460 | 34.343 | 99 | 59 | 4 | 79 | 176 | 54 | 147 | 2.87e-11 | 61.2 |
| MS.gene40620.t1 | AT3G30460 | 34.343 | 99 | 59 | 4 | 79 | 176 | 90 | 183 | 3.05e-11 | 62.0 |
| MS.gene40620.t1 | AT1G53010 | 48.936 | 47 | 24 | 0 | 125 | 171 | 129 | 175 | 4.11e-11 | 61.6 |
| MS.gene40620.t1 | AT5G41400 | 36.232 | 69 | 42 | 1 | 106 | 172 | 85 | 153 | 4.86e-11 | 61.2 |
| MS.gene40620.t1 | AT4G30370 | 36.111 | 72 | 43 | 1 | 97 | 168 | 89 | 157 | 6.37e-11 | 61.2 |
| MS.gene40620.t1 | AT1G26800 | 41.176 | 68 | 38 | 2 | 112 | 179 | 99 | 164 | 8.64e-11 | 61.2 |
Find 102 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGTTTGCAGAGCTAATT+TGG | 0.212949 | 1.4:+66758466 | MS.gene40620:CDS |
| CTTCTAGCTCTATGTAATTC+CGG | 0.266296 | 1.4:-66758815 | None:intergenic |
| AGCTAATTTGGTTCCTCAAC+CGG | 0.306735 | 1.4:+66758478 | MS.gene40620:CDS |
| CGGTCATTCGGTGGTTCAAC+CGG | 0.317157 | 1.4:+66758724 | MS.gene40620:CDS |
| CATCGCTGCTCTCTTTCTCA+TGG | 0.347514 | 1.4:+66758139 | MS.gene40620:CDS |
| GTGAACCTCTTGTACGGTTC+CGG | 0.356534 | 1.4:-66758661 | None:intergenic |
| TACGGTTCCGGTTCAGCGTC+TGG | 0.359258 | 1.4:-66758649 | None:intergenic |
| TTCTAGCTCTATGTAATTCC+GGG | 0.363125 | 1.4:-66758814 | None:intergenic |
| GTCTGTAAGGCGGTTGGACC+GGG | 0.367584 | 1.4:+66758916 | MS.gene40620:CDS |
| AGTCTGTAAGGCGGTTGGAC+CGG | 0.371626 | 1.4:+66758915 | MS.gene40620:CDS |
| TGGCTTACAGTCAACACTTC+TGG | 0.379879 | 1.4:-66758629 | None:intergenic |
| AGCTTCAATATCTTGTGGTT+CGG | 0.385992 | 1.4:-66758534 | None:intergenic |
| CACAGTCTGGTAGGCTTCGT+TGG | 0.428411 | 1.4:+66758681 | MS.gene40620:CDS |
| GTCTCACTCGACCGGTCATT+CGG | 0.429376 | 1.4:+66758712 | MS.gene40620:CDS |
| TTCTCCGGCGTCCCCTTCGC+CGG | 0.431079 | 1.4:+66758038 | MS.gene40620:CDS |
| CTGTAAGCCAGACGCTGAAC+CGG | 0.432316 | 1.4:+66758642 | MS.gene40620:CDS |
| GTTGGATTGTGCTCCGGCGA+AGG | 0.435306 | 1.4:-66758051 | None:intergenic |
| TTGGATTGTGCTCCGGCGAA+GGG | 0.440848 | 1.4:-66758050 | None:intergenic |
| GCTGTGAAGATTCATAAAAT+CGG | 0.441212 | 1.4:+66758311 | MS.gene40620:CDS |
| CGGTTCTCATACCACTTGTC+CGG | 0.441794 | 1.4:+66758448 | MS.gene40620:CDS |
| CGTACAAGAGGTTCACAGTC+TGG | 0.444556 | 1.4:+66758668 | MS.gene40620:CDS |
| GGTTCCTCAACCGGGTGAAT+CGG | 0.448219 | 1.4:+66758487 | MS.gene40620:CDS |
| ATCGCTGCTCTCTTTCTCAT+GGG | 0.451040 | 1.4:+66758140 | MS.gene40620:CDS |
| ACCCTGAGTGTATTGATGAA+TGG | 0.454351 | 1.4:+66758423 | MS.gene40620:CDS |
| ACACTGAACGGTTCACTTTG+AGG | 0.456031 | 1.4:+66758753 | MS.gene40620:CDS |
| ATTTGTTTCCTCACTTCAAC+CGG | 0.460725 | 1.4:-66758779 | None:intergenic |
| TCATCGACGACGCTCTTACA+AGG | 0.474117 | 1.4:-66758983 | None:intergenic |
| GTAGTAGAGGGAAGTCTGTA+AGG | 0.476128 | 1.4:+66758903 | MS.gene40620:CDS |
| ACCAAATTAGCTCTGCAAAC+CGG | 0.481146 | 1.4:-66758467 | None:intergenic |
| AAGATTCATAAAATCGGAAA+AGG | 0.498603 | 1.4:+66758317 | MS.gene40620:CDS |
| TGCCATGTTGCGTATGCTGT+TGG | 0.500893 | 1.4:-66758204 | None:intergenic |
| ACGGTTCACTTTGAGGCTAC+CGG | 0.501722 | 1.4:+66758760 | MS.gene40620:CDS |
| AGGGGTTATCGAACCGGTGG+TGG | 0.502322 | 1.4:+66758872 | MS.gene40620:CDS |
| GCTAATTTGGTTCCTCAACC+GGG | 0.505025 | 1.4:+66758479 | MS.gene40620:CDS |
| GTGGTTCGGTATTAATCGAC+GGG | 0.509943 | 1.4:-66758520 | None:intergenic |
| TCAAAACGAAGCTGTTGAAT+CGG | 0.511719 | 1.4:+66758556 | MS.gene40620:CDS |
| ACTACTTCCTTCACCACCAC+CGG | 0.514270 | 1.4:-66758885 | None:intergenic |
| ACAGCTGAGTATTCAAAGAT+CGG | 0.516546 | 1.4:-66758293 | None:intergenic |
| TCACGGAGGGGTTATCGAAC+CGG | 0.519162 | 1.4:+66758866 | MS.gene40620:CDS |
| CAGCTGAGTATTCAAAGATC+GGG | 0.520772 | 1.4:-66758292 | None:intergenic |
| TATCGAACCGGTGGTGGTGA+AGG | 0.528546 | 1.4:+66758878 | MS.gene40620:CDS |
| CGGTTGAACCACCGAATGAC+CGG | 0.529306 | 1.4:-66758723 | None:intergenic |
| CAACCGGGTGAATCGGTTCA+CGG | 0.534267 | 1.4:+66758494 | MS.gene40620:CDS |
| ACCGGGGTTTATTATCAGAC+CGG | 0.534594 | 1.4:+66758933 | MS.gene40620:CDS |
| CTCCGTGAACTAGTTTCTCT+CGG | 0.538814 | 1.4:-66758851 | None:intergenic |
| AGCGCGTGGTCTTGACGCAT+CGG | 0.542829 | 1.4:+66758256 | MS.gene40620:CDS |
| GTCAACACTTCTGGTTCAGT+TGG | 0.543615 | 1.4:-66758620 | None:intergenic |
| GGTGGTGAAGGAAGTAGTAG+AGG | 0.547027 | 1.4:+66758890 | MS.gene40620:CDS |
| TGCTCCGGCGAAGGGGACGC+CGG | 0.550536 | 1.4:-66758042 | None:intergenic |
| ACGATTATTATAGCCATGGA+AGG | 0.551241 | 1.4:-66758110 | None:intergenic |
| AACATGGCAGGAGGTTTAGC+TGG | 0.555970 | 1.4:+66758218 | MS.gene40620:CDS |
| CCAGAGCTACTAGCCACCCT+TGG | 0.560296 | 1.4:-66759011 | None:intergenic |
| GTGGTGAAGGAAGTAGTAGA+GGG | 0.560832 | 1.4:+66758891 | MS.gene40620:CDS |
| AGGGAAGTCTGTAAGGCGGT+TGG | 0.563226 | 1.4:+66758910 | MS.gene40620:CDS |
| GGTCATTCGGTGGTTCAACC+GGG | 0.563296 | 1.4:+66758725 | MS.gene40620:CDS |
| CGATTATTATAGCCATGGAA+GGG | 0.570321 | 1.4:-66758109 | None:intergenic |
| TAAAATCGGAAAAGGCGCGT+TGG | 0.576420 | 1.4:+66758325 | MS.gene40620:CDS |
| AATTACGATTATTATAGCCA+TGG | 0.576610 | 1.4:-66758114 | None:intergenic |
| CAACCGTGTAAGCCCTTCCA+TGG | 0.576724 | 1.4:+66758097 | MS.gene40620:CDS |
| AACCGTTCAGTGTTCTCACC+CGG | 0.577046 | 1.4:-66758743 | None:intergenic |
| CAAGAGGTTCACAGTCTGGT+AGG | 0.578814 | 1.4:+66758672 | MS.gene40620:CDS |
| TGCCGAGAGAAACTAGTTCA+CGG | 0.579406 | 1.4:+66758849 | MS.gene40620:CDS |
| CGTTCACGACGCGCAGCGCG+TGG | 0.581144 | 1.4:+66758242 | MS.gene40620:CDS |
| TGGATTGTGCTCCGGCGAAG+GGG | 0.581939 | 1.4:-66758049 | None:intergenic |
| TGAACCGATTCACCCGGTTG+AGG | 0.582525 | 1.4:-66758491 | None:intergenic |
| ATTACATAGAGCTAGAAGCT+TGG | 0.585444 | 1.4:+66758820 | MS.gene40620:CDS |
| TTGTAAGAGCGTCGTCGATG+AGG | 0.587789 | 1.4:+66758985 | MS.gene40620:CDS |
| TGTGGTTCGGTATTAATCGA+CGG | 0.592922 | 1.4:-66758521 | None:intergenic |
| TAGCCATGGAAGGGCTTACA+CGG | 0.600576 | 1.4:-66758100 | None:intergenic |
| GGGGTTTATTATCAGACCGG+TGG | 0.601732 | 1.4:+66758936 | MS.gene40620:CDS |
| CAGACTGTGAACCTCTTGTA+CGG | 0.601926 | 1.4:-66758667 | None:intergenic |
| AACAGCATACGCAACATGGC+AGG | 0.603528 | 1.4:+66758206 | MS.gene40620:CDS |
| TTCCAACAGCATACGCAACA+TGG | 0.603661 | 1.4:+66758202 | MS.gene40620:CDS |
| AGCTCTGCAAACCGGACAAG+TGG | 0.605322 | 1.4:-66758459 | None:intergenic |
| GAGAGAAACTAGTTCACGGA+GGG | 0.607219 | 1.4:+66758853 | MS.gene40620:CDS |
| ACAAATACTACTACAGAACC+CGG | 0.610210 | 1.4:+66758796 | MS.gene40620:CDS |
| TCAATCTACATCCGTCGATG+CGG | 0.611966 | 1.4:+66758170 | MS.gene40620:CDS |
| GTCGATGAGGTCACCAAGGG+TGG | 0.612726 | 1.4:+66758998 | MS.gene40620:CDS |
| TGAGGCTACCGGTTGAAGTG+AGG | 0.617089 | 1.4:+66758771 | MS.gene40620:CDS |
| AGCCATTCATCAATACACTC+AGG | 0.617765 | 1.4:-66758425 | None:intergenic |
| GGGTTTATTATCAGACCGGT+GGG | 0.618718 | 1.4:+66758937 | MS.gene40620:CDS |
| CTGAACCGGAACCGTACAAG+AGG | 0.626899 | 1.4:+66758656 | MS.gene40620:CDS |
| TCTGTAAGGCGGTTGGACCG+GGG | 0.627057 | 1.4:+66758917 | MS.gene40620:CDS |
| GACGACGCTCTTACAAGGAA+AGG | 0.631736 | 1.4:-66758978 | None:intergenic |
| GAGTGTATTGATGAATGGCT+CGG | 0.639572 | 1.4:+66758428 | MS.gene40620:CDS |
| GTCGTCGATGAGGTCACCAA+GGG | 0.640752 | 1.4:+66758995 | MS.gene40620:CDS |
| AAGGTGAATCGCCGCATCGA+CGG | 0.646247 | 1.4:-66758181 | None:intergenic |
| GACGCTCTTACAAGGAAAGG+TGG | 0.654435 | 1.4:-66758975 | None:intergenic |
| ATGTTGCGTATGCTGTTGGA+AGG | 0.655101 | 1.4:-66758200 | None:intergenic |
| CGTCGTCGATGAGGTCACCA+AGG | 0.655380 | 1.4:+66758994 | MS.gene40620:CDS |
| GCCATTCATCAATACACTCA+GGG | 0.657590 | 1.4:-66758424 | None:intergenic |
| ATACCGTGAACCGATTCACC+CGG | 0.658513 | 1.4:-66758497 | None:intergenic |
| TCACTCGACCGGTCATTCGG+TGG | 0.659670 | 1.4:+66758715 | MS.gene40620:CDS |
| AGCATACGCAACATGGCAGG+AGG | 0.660418 | 1.4:+66758209 | MS.gene40620:CDS |
| CGGAGGGGTTATCGAACCGG+TGG | 0.660988 | 1.4:+66758869 | MS.gene40620:CDS |
| AACCGGGTGAGAACACTGAA+CGG | 0.665353 | 1.4:+66758741 | MS.gene40620:CDS |
| CATGAACATCAAAACGCGGA+CGG | 0.680031 | 1.4:+66758581 | MS.gene40620:CDS |
| AGAGAAACTAGTTCACGGAG+GGG | 0.692307 | 1.4:+66758854 | MS.gene40620:CDS |
| ACCGGTCTGATAATAAACCC+CGG | 0.693889 | 1.4:-66758934 | None:intergenic |
| GTAGAGGGAAGTCTGTAAGG+CGG | 0.711054 | 1.4:+66758906 | MS.gene40620:CDS |
| CGAGAGAAACTAGTTCACGG+AGG | 0.730676 | 1.4:+66758852 | MS.gene40620:CDS |
| GGTTCATGAACATCAAAACG+CGG | 0.772463 | 1.4:+66758577 | MS.gene40620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGATTCATAAAATCGGAAA+AGG | + | chr1.4:66758317-66758336 | MS.gene40620:CDS | 25.0% |
| ! | AATTACGATTATTATAGCCA+TGG | - | chr1.4:66758117-66758136 | None:intergenic | 25.0% |
| AGAACAAGAAAAAACACACA+AGG | - | chr1.4:66758010-66758029 | None:intergenic | 30.0% | |
| GCTGTGAAGATTCATAAAAT+CGG | + | chr1.4:66758311-66758330 | MS.gene40620:CDS | 30.0% | |
| TGAAAAACATGATCACACTT+TGG | - | chr1.4:66758404-66758423 | None:intergenic | 30.0% | |
| ! | TTTTGAGCTTCAATATCTTG+TGG | - | chr1.4:66758542-66758561 | None:intergenic | 30.0% |
| ACAAATACTACTACAGAACC+CGG | + | chr1.4:66758796-66758815 | MS.gene40620:CDS | 35.0% | |
| ACAGCTGAGTATTCAAAGAT+CGG | - | chr1.4:66758296-66758315 | None:intergenic | 35.0% | |
| ACGATTATTATAGCCATGGA+AGG | - | chr1.4:66758113-66758132 | None:intergenic | 35.0% | |
| AGCTTCAATATCTTGTGGTT+CGG | - | chr1.4:66758537-66758556 | None:intergenic | 35.0% | |
| ATTACATAGAGCTAGAAGCT+TGG | + | chr1.4:66758820-66758839 | MS.gene40620:CDS | 35.0% | |
| ATTTGTTTCCTCACTTCAAC+CGG | - | chr1.4:66758782-66758801 | None:intergenic | 35.0% | |
| CGATTATTATAGCCATGGAA+GGG | - | chr1.4:66758112-66758131 | None:intergenic | 35.0% | |
| TCAAAACGAAGCTGTTGAAT+CGG | + | chr1.4:66758556-66758575 | MS.gene40620:CDS | 35.0% | |
| ! | TTGTTCTTCCTCTTTTTCTC+CGG | + | chr1.4:66758023-66758042 | MS.gene40620:CDS | 35.0% |
| !! | CTTCTAGCTCTATGTAATTC+CGG | - | chr1.4:66758818-66758837 | None:intergenic | 35.0% |
| !! | TTCTAGCTCTATGTAATTCC+GGG | - | chr1.4:66758817-66758836 | None:intergenic | 35.0% |
| AGCCATTCATCAATACACTC+AGG | - | chr1.4:66758428-66758447 | None:intergenic | 40.0% | |
| CAGCTGAGTATTCAAAGATC+GGG | - | chr1.4:66758295-66758314 | None:intergenic | 40.0% | |
| GCCATTCATCAATACACTCA+GGG | - | chr1.4:66758427-66758446 | None:intergenic | 40.0% | |
| GGTTCATGAACATCAAAACG+CGG | + | chr1.4:66758577-66758596 | MS.gene40620:CDS | 40.0% | |
| ! | ACCCTGAGTGTATTGATGAA+TGG | + | chr1.4:66758423-66758442 | MS.gene40620:CDS | 40.0% |
| ! | AGAGTCGTTTGTGTTTTCGT+TGG | - | chr1.4:66758072-66758091 | None:intergenic | 40.0% |
| ! | AGCTAATTTGGTTCCTCAAC+CGG | + | chr1.4:66758478-66758497 | MS.gene40620:CDS | 40.0% |
| ! | GAGTGTATTGATGAATGGCT+CGG | + | chr1.4:66758428-66758447 | MS.gene40620:CDS | 40.0% |
| !! | ACCAAATTAGCTCTGCAAAC+CGG | - | chr1.4:66758470-66758489 | None:intergenic | 40.0% |
| !! | TGTGGTTCGGTATTAATCGA+CGG | - | chr1.4:66758524-66758543 | None:intergenic | 40.0% |
| ACACTGAACGGTTCACTTTG+AGG | + | chr1.4:66758753-66758772 | MS.gene40620:CDS | 45.0% | |
| ACCGGGGTTTATTATCAGAC+CGG | + | chr1.4:66758933-66758952 | MS.gene40620:CDS | 45.0% | |
| ACCGGTCTGATAATAAACCC+CGG | - | chr1.4:66758937-66758956 | None:intergenic | 45.0% | |
| AGAGAAACTAGTTCACGGAG+GGG | + | chr1.4:66758854-66758873 | MS.gene40620:CDS | 45.0% | |
| ATCGCTGCTCTCTTTCTCAT+GGG | + | chr1.4:66758140-66758159 | MS.gene40620:CDS | 45.0% | |
| ATGTTGCGTATGCTGTTGGA+AGG | - | chr1.4:66758203-66758222 | None:intergenic | 45.0% | |
| CAGACTGTGAACCTCTTGTA+CGG | - | chr1.4:66758670-66758689 | None:intergenic | 45.0% | |
| CATGAACATCAAAACGCGGA+CGG | + | chr1.4:66758581-66758600 | MS.gene40620:CDS | 45.0% | |
| GAGAGAAACTAGTTCACGGA+GGG | + | chr1.4:66758853-66758872 | MS.gene40620:CDS | 45.0% | |
| GGGTTTATTATCAGACCGGT+GGG | + | chr1.4:66758937-66758956 | MS.gene40620:CDS | 45.0% | |
| GTAGTAGAGGGAAGTCTGTA+AGG | + | chr1.4:66758903-66758922 | MS.gene40620:CDS | 45.0% | |
| GTGGTGAAGGAAGTAGTAGA+GGG | + | chr1.4:66758891-66758910 | MS.gene40620:CDS | 45.0% | |
| TCAATCTACATCCGTCGATG+CGG | + | chr1.4:66758170-66758189 | MS.gene40620:CDS | 45.0% | |
| TGCCGAGAGAAACTAGTTCA+CGG | + | chr1.4:66758849-66758868 | MS.gene40620:CDS | 45.0% | |
| TGGCTTACAGTCAACACTTC+TGG | - | chr1.4:66758632-66758651 | None:intergenic | 45.0% | |
| TTCCAACAGCATACGCAACA+TGG | + | chr1.4:66758202-66758221 | MS.gene40620:CDS | 45.0% | |
| ! | CTCCGTGAACTAGTTTCTCT+CGG | - | chr1.4:66758854-66758873 | None:intergenic | 45.0% |
| ! | GCTAATTTGGTTCCTCAACC+GGG | + | chr1.4:66758479-66758498 | MS.gene40620:CDS | 45.0% |
| ! | GTTTTCGTTGGATTGTGCTC+CGG | - | chr1.4:66758060-66758079 | None:intergenic | 45.0% |
| ! | TAAAATCGGAAAAGGCGCGT+TGG | + | chr1.4:66758325-66758344 | MS.gene40620:CDS | 45.0% |
| ! | TCCGGTTTGCAGAGCTAATT+TGG | + | chr1.4:66758466-66758485 | MS.gene40620:CDS | 45.0% |
| !! | GTCAACACTTCTGGTTCAGT+TGG | - | chr1.4:66758623-66758642 | None:intergenic | 45.0% |
| !! | GTGGTTCGGTATTAATCGAC+GGG | - | chr1.4:66758523-66758542 | None:intergenic | 45.0% |
| AACAGCATACGCAACATGGC+AGG | + | chr1.4:66758206-66758225 | MS.gene40620:CDS | 50.0% | |
| AACATGGCAGGAGGTTTAGC+TGG | + | chr1.4:66758218-66758237 | MS.gene40620:CDS | 50.0% | |
| AACCGGGTGAGAACACTGAA+CGG | + | chr1.4:66758741-66758760 | MS.gene40620:CDS | 50.0% | |
| AACCGTTCAGTGTTCTCACC+CGG | - | chr1.4:66758746-66758765 | None:intergenic | 50.0% | |
| ACTACTTCCTTCACCACCAC+CGG | - | chr1.4:66758888-66758907 | None:intergenic | 50.0% | |
| CAAGAGGTTCACAGTCTGGT+AGG | + | chr1.4:66758672-66758691 | MS.gene40620:CDS | 50.0% | |
| CATCGCTGCTCTCTTTCTCA+TGG | + | chr1.4:66758139-66758158 | MS.gene40620:CDS | 50.0% | |
| CGAGAGAAACTAGTTCACGG+AGG | + | chr1.4:66758852-66758871 | MS.gene40620:CDS | 50.0% | |
| CGCCATCGTAAAAAACCCAC+CGG | - | chr1.4:66758955-66758974 | None:intergenic | 50.0% | |
| CGGTTCTCATACCACTTGTC+CGG | + | chr1.4:66758448-66758467 | MS.gene40620:CDS | 50.0% | |
| CGTACAAGAGGTTCACAGTC+TGG | + | chr1.4:66758668-66758687 | MS.gene40620:CDS | 50.0% | |
| GACGACGCTCTTACAAGGAA+AGG | - | chr1.4:66758981-66759000 | None:intergenic | 50.0% | |
| GACGCTCTTACAAGGAAAGG+TGG | - | chr1.4:66758978-66758997 | None:intergenic | 50.0% | |
| GGGGTTTATTATCAGACCGG+TGG | + | chr1.4:66758936-66758955 | MS.gene40620:CDS | 50.0% | |
| GGTGGTGAAGGAAGTAGTAG+AGG | + | chr1.4:66758890-66758909 | MS.gene40620:CDS | 50.0% | |
| GTAGAGGGAAGTCTGTAAGG+CGG | + | chr1.4:66758906-66758925 | MS.gene40620:CDS | 50.0% | |
| GTGAACCTCTTGTACGGTTC+CGG | - | chr1.4:66758664-66758683 | None:intergenic | 50.0% | |
| TAGCCATGGAAGGGCTTACA+CGG | - | chr1.4:66758103-66758122 | None:intergenic | 50.0% | |
| TCATCGACGACGCTCTTACA+AGG | - | chr1.4:66758986-66759005 | None:intergenic | 50.0% | |
| TGCCATGTTGCGTATGCTGT+TGG | - | chr1.4:66758207-66758226 | None:intergenic | 50.0% | |
| ! | ATACCGTGAACCGATTCACC+CGG | - | chr1.4:66758500-66758519 | None:intergenic | 50.0% |
| !! | ACGGTTCACTTTGAGGCTAC+CGG | + | chr1.4:66758760-66758779 | MS.gene40620:CDS | 50.0% |
| !! | TTGTAAGAGCGTCGTCGATG+AGG | + | chr1.4:66758985-66759004 | MS.gene40620:CDS | 50.0% |
| !! | TTTTCGAGGTCTCACTCGAC+CGG | + | chr1.4:66758704-66758723 | MS.gene40620:CDS | 50.0% |
| !!! | GACCGGTGGGTTTTTTACGA+TGG | + | chr1.4:66758950-66758969 | MS.gene40620:CDS | 50.0% |
| !!! | GTAGGCTTCGTTGGTTTTCG+AGG | + | chr1.4:66758690-66758709 | MS.gene40620:CDS | 50.0% |
| AAGGTGAATCGCCGCATCGA+CGG | - | chr1.4:66758184-66758203 | None:intergenic | 55.0% | |
| AGCATACGCAACATGGCAGG+AGG | + | chr1.4:66758209-66758228 | MS.gene40620:CDS | 55.0% | |
| AGCTCTGCAAACCGGACAAG+TGG | - | chr1.4:66758462-66758481 | None:intergenic | 55.0% | |
| AGGGAAGTCTGTAAGGCGGT+TGG | + | chr1.4:66758910-66758929 | MS.gene40620:CDS | 55.0% | |
| AGTCTGTAAGGCGGTTGGAC+CGG | + | chr1.4:66758915-66758934 | MS.gene40620:CDS | 55.0% | |
| CAACCGTGTAAGCCCTTCCA+TGG | + | chr1.4:66758097-66758116 | MS.gene40620:CDS | 55.0% | |
| CACAGTCTGGTAGGCTTCGT+TGG | + | chr1.4:66758681-66758700 | MS.gene40620:CDS | 55.0% | |
| CGGTTGAACCACCGAATGAC+CGG | - | chr1.4:66758726-66758745 | None:intergenic | 55.0% | |
| CTGAACCGGAACCGTACAAG+AGG | + | chr1.4:66758656-66758675 | MS.gene40620:CDS | 55.0% | |
| CTGTAAGCCAGACGCTGAAC+CGG | + | chr1.4:66758642-66758661 | MS.gene40620:CDS | 55.0% | |
| GGTTCCTCAACCGGGTGAAT+CGG | + | chr1.4:66758487-66758506 | MS.gene40620:CDS | 55.0% | |
| GTCGTCGATGAGGTCACCAA+GGG | + | chr1.4:66758995-66759014 | MS.gene40620:CDS | 55.0% | |
| GTCTCACTCGACCGGTCATT+CGG | + | chr1.4:66758712-66758731 | MS.gene40620:CDS | 55.0% | |
| TCACGGAGGGGTTATCGAAC+CGG | + | chr1.4:66758866-66758885 | MS.gene40620:CDS | 55.0% | |
| TTGGATTGTGCTCCGGCGAA+GGG | - | chr1.4:66758053-66758072 | None:intergenic | 55.0% | |
| ! | CAACCGGGTGAATCGGTTCA+CGG | + | chr1.4:66758494-66758513 | MS.gene40620:CDS | 55.0% |
| ! | CGGTCATTCGGTGGTTCAAC+CGG | + | chr1.4:66758724-66758743 | MS.gene40620:CDS | 55.0% |
| ! | GGTCATTCGGTGGTTCAACC+GGG | + | chr1.4:66758725-66758744 | MS.gene40620:CDS | 55.0% |
| ! | TATCGAACCGGTGGTGGTGA+AGG | + | chr1.4:66758878-66758897 | MS.gene40620:CDS | 55.0% |
| ! | TGAACCGATTCACCCGGTTG+AGG | - | chr1.4:66758494-66758513 | None:intergenic | 55.0% |
| ! | TGAGGCTACCGGTTGAAGTG+AGG | + | chr1.4:66758771-66758790 | MS.gene40620:CDS | 55.0% |
| AGGGGACGCCGGAGAAAAAG+AGG | - | chr1.4:66758034-66758053 | None:intergenic | 60.0% | |
| AGGGGTTATCGAACCGGTGG+TGG | + | chr1.4:66758872-66758891 | MS.gene40620:CDS | 60.0% | |
| CGTCGTCGATGAGGTCACCA+AGG | + | chr1.4:66758994-66759013 | MS.gene40620:CDS | 60.0% | |
| GTCGATGAGGTCACCAAGGG+TGG | + | chr1.4:66758998-66759017 | MS.gene40620:CDS | 60.0% | |
| GTCTGTAAGGCGGTTGGACC+GGG | + | chr1.4:66758916-66758935 | MS.gene40620:CDS | 60.0% | |
| GTTGGATTGTGCTCCGGCGA+AGG | - | chr1.4:66758054-66758073 | None:intergenic | 60.0% | |
| TACGGTTCCGGTTCAGCGTC+TGG | - | chr1.4:66758652-66758671 | None:intergenic | 60.0% | |
| TCACTCGACCGGTCATTCGG+TGG | + | chr1.4:66758715-66758734 | MS.gene40620:CDS | 60.0% | |
| TCTGTAAGGCGGTTGGACCG+GGG | + | chr1.4:66758917-66758936 | MS.gene40620:CDS | 60.0% | |
| TGGATTGTGCTCCGGCGAAG+GGG | - | chr1.4:66758052-66758071 | None:intergenic | 60.0% | |
| ! | AGCGCGTGGTCTTGACGCAT+CGG | + | chr1.4:66758256-66758275 | MS.gene40620:CDS | 60.0% |
| CGGAGGGGTTATCGAACCGG+TGG | + | chr1.4:66758869-66758888 | MS.gene40620:CDS | 65.0% | |
| TTCTCCGGCGTCCCCTTCGC+CGG | + | chr1.4:66758038-66758057 | MS.gene40620:CDS | 70.0% | |
| CGTTCACGACGCGCAGCGCG+TGG | + | chr1.4:66758242-66758261 | MS.gene40620:CDS | 75.0% | |
| TGCTCCGGCGAAGGGGACGC+CGG | - | chr1.4:66758045-66758064 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 66757975 | 66759024 | 66757975 | ID=MS.gene40620 |
| chr1.4 | mRNA | 66757975 | 66759024 | 66757975 | ID=MS.gene40620.t1;Parent=MS.gene40620 |
| chr1.4 | exon | 66757975 | 66759024 | 66757975 | ID=MS.gene40620.t1.exon1;Parent=MS.gene40620.t1 |
| chr1.4 | CDS | 66757975 | 66759024 | 66757975 | ID=cds.MS.gene40620.t1;Parent=MS.gene40620.t1 |
| Gene Sequence |
| Protein sequence |
