Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052089.t1 | XP_013465418.1 | 94.7 | 656 | 33 | 2 | 1 | 654 | 1 | 656 | 0.00E+00 | 1241.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052089.t1 | Q9XE58 | 38.4 | 756 | 353 | 13 | 7 | 654 | 17 | 767 | 2.3e-130 | 467.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052089.t1 | A0A072VDE5 | 94.7 | 656 | 33 | 2 | 1 | 654 | 1 | 656 | 0.0e+00 | 1241.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052089.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050883 | MS.gene052089 | 0.808881 | 2.49E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene052091 | 0.839737 | 1.32E-57 | -1.69E-46 |
| MS.gene052089 | MS.gene054056 | 0.817532 | 3.14E-52 | -1.69E-46 |
| MS.gene052089 | MS.gene055549 | 0.812276 | 4.60E-51 | -1.69E-46 |
| MS.gene052089 | MS.gene055550 | 0.826424 | 2.73E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene058493 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene058628 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene058629 | 0.808876 | 2.50E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene058630 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene052089 | MS.gene062071 | 0.819482 | 1.14E-52 | -1.69E-46 |
| MS.gene052089 | MS.gene064019 | 0.817987 | 2.48E-52 | -1.69E-46 |
| MS.gene052089 | MS.gene072378 | 0.82857 | 8.35E-55 | -1.69E-46 |
| MS.gene052089 | MS.gene072476 | 0.803602 | 3.22E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene21577 | 0.803484 | 3.41E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene27711 | 0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene052089 | MS.gene27835 | 0.808218 | 3.45E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene31128 | 0.891344 | 4.33E-74 | -1.69E-46 |
| MS.gene052089 | MS.gene31129 | 0.802904 | 4.50E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene31130 | 0.833305 | 5.76E-56 | -1.69E-46 |
| MS.gene052089 | MS.gene31404 | 0.814273 | 1.68E-51 | -1.69E-46 |
| MS.gene052089 | MS.gene36438 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene052089 | MS.gene38172 | 0.80086 | 1.18E-48 | -1.69E-46 |
| MS.gene052089 | MS.gene39054 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene39534 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene39535 | 0.825305 | 5.04E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene40247 | 0.801554 | 8.52E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene40619 | 0.826093 | 3.28E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene40620 | 0.820787 | 5.70E-53 | -1.69E-46 |
| MS.gene052089 | MS.gene40699 | 0.823744 | 1.17E-53 | -1.69E-46 |
| MS.gene052089 | MS.gene44723 | 0.807744 | 4.35E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene45155 | 0.804856 | 1.77E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene45522 | 0.802724 | 4.90E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene45523 | 0.923838 | 1.56E-89 | -1.69E-46 |
| MS.gene052089 | MS.gene47049 | 0.822301 | 2.55E-53 | -1.69E-46 |
| MS.gene052089 | MS.gene47576 | 0.814032 | 1.89E-51 | -1.69E-46 |
| MS.gene052089 | MS.gene47682 | 0.804006 | 2.66E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene51514 | 0.82894 | 6.80E-55 | -1.69E-46 |
| MS.gene052089 | MS.gene54882 | 0.833793 | 4.35E-56 | -1.69E-46 |
| MS.gene052089 | MS.gene60477 | 0.803806 | 2.92E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene60722 | 0.803977 | 2.69E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene63691 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene66360 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene052089 | MS.gene67682 | 0.806634 | 7.48E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene67744 | 0.839148 | 1.88E-57 | -1.69E-46 |
| MS.gene052089 | MS.gene73256 | 0.819792 | 9.64E-53 | -1.69E-46 |
| MS.gene052089 | MS.gene73753 | 0.827152 | 1.83E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene75048 | 0.818765 | 1.65E-52 | -1.69E-46 |
| MS.gene052089 | MS.gene75508 | 0.840222 | 9.90E-58 | -1.69E-46 |
| MS.gene052089 | MS.gene78593 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene78885 | 0.808388 | 3.17E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene79094 | 0.850901 | 1.26E-60 | -1.69E-46 |
| MS.gene052089 | MS.gene79201 | 0.853226 | 2.75E-61 | -1.69E-46 |
| MS.gene052089 | MS.gene80092 | 0.825361 | 4.89E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene84704 | 0.847796 | 9.22E-60 | -1.69E-46 |
| MS.gene052089 | MS.gene85298 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene88198 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene052089 | MS.gene88888 | 0.800283 | 1.55E-48 | -1.69E-46 |
| MS.gene052089 | MS.gene89082 | 0.812163 | 4.87E-51 | -1.69E-46 |
| MS.gene052089 | MS.gene92589 | 0.827172 | 1.81E-54 | -1.69E-46 |
| MS.gene052089 | MS.gene95714 | 0.818004 | 2.46E-52 | -1.69E-46 |
| MS.gene052089 | MS.gene95833 | 0.802767 | 4.80E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052089.t1 | MTR_2g097473 | 94.665 | 656 | 33 | 2 | 1 | 654 | 1 | 656 | 0.0 | 1256 |
| MS.gene052089.t1 | MTR_2g097467 | 91.921 | 656 | 51 | 2 | 1 | 654 | 1 | 656 | 0.0 | 1201 |
| MS.gene052089.t1 | MTR_2g097463 | 81.583 | 657 | 118 | 3 | 1 | 654 | 1 | 657 | 0.0 | 1088 |
| MS.gene052089.t1 | MTR_4g064200 | 53.913 | 690 | 244 | 12 | 1 | 654 | 1 | 652 | 0.0 | 677 |
| MS.gene052089.t1 | MTR_7g062120 | 43.275 | 684 | 308 | 13 | 44 | 654 | 66 | 742 | 1.32e-180 | 531 |
| MS.gene052089.t1 | MTR_4g064160 | 53.305 | 469 | 199 | 7 | 199 | 654 | 225 | 686 | 1.02e-166 | 493 |
| MS.gene052089.t1 | MTR_4g064120 | 45.024 | 633 | 308 | 15 | 38 | 654 | 20 | 628 | 2.75e-166 | 490 |
| MS.gene052089.t1 | MTR_4g064150 | 42.921 | 671 | 315 | 18 | 38 | 654 | 79 | 735 | 1.33e-163 | 487 |
| MS.gene052089.t1 | MTR_4g064180 | 44.708 | 633 | 310 | 15 | 38 | 654 | 20 | 628 | 6.93e-163 | 481 |
| MS.gene052089.t1 | MTR_2g097410 | 50.542 | 461 | 220 | 5 | 201 | 654 | 284 | 743 | 2.26e-159 | 476 |
| MS.gene052089.t1 | MTR_2g097390 | 46.189 | 433 | 219 | 6 | 228 | 654 | 219 | 643 | 3.19e-131 | 400 |
| MS.gene052089.t1 | MTR_2g097310 | 46.651 | 433 | 216 | 7 | 228 | 654 | 217 | 640 | 9.74e-131 | 399 |
| MS.gene052089.t1 | MTR_2g097350 | 50.132 | 379 | 179 | 5 | 282 | 654 | 268 | 642 | 2.12e-129 | 395 |
| MS.gene052089.t1 | MTR_2g097380 | 49.315 | 365 | 156 | 5 | 291 | 654 | 227 | 563 | 3.56e-120 | 369 |
| MS.gene052089.t1 | MTR_2g026250 | 30.027 | 373 | 257 | 3 | 283 | 651 | 223 | 595 | 3.53e-59 | 209 |
| MS.gene052089.t1 | MTR_2g082090 | 32.908 | 392 | 254 | 7 | 266 | 651 | 190 | 578 | 4.85e-58 | 206 |
| MS.gene052089.t1 | MTR_5g097480 | 32.976 | 373 | 243 | 6 | 284 | 651 | 173 | 543 | 6.65e-58 | 204 |
| MS.gene052089.t1 | MTR_4g133660 | 29.756 | 410 | 269 | 8 | 258 | 652 | 138 | 543 | 2.25e-55 | 197 |
| MS.gene052089.t1 | MTR_1g029420 | 28.883 | 367 | 258 | 2 | 288 | 651 | 225 | 591 | 1.12e-52 | 191 |
| MS.gene052089.t1 | MTR_3g056110 | 29.650 | 371 | 258 | 2 | 284 | 651 | 171 | 541 | 5.02e-52 | 188 |
| MS.gene052089.t1 | MTR_5g094450 | 30.952 | 378 | 248 | 8 | 284 | 651 | 157 | 531 | 1.60e-51 | 187 |
| MS.gene052089.t1 | MTR_7g027190 | 30.982 | 397 | 231 | 9 | 281 | 651 | 293 | 672 | 4.04e-51 | 188 |
| MS.gene052089.t1 | MTR_3g089055 | 28.338 | 367 | 260 | 2 | 288 | 651 | 203 | 569 | 6.77e-50 | 183 |
| MS.gene052089.t1 | MTR_3g089055 | 28.338 | 367 | 260 | 2 | 288 | 651 | 198 | 564 | 6.82e-50 | 183 |
| MS.gene052089.t1 | MTR_8g442410 | 30.155 | 388 | 241 | 7 | 282 | 651 | 149 | 524 | 4.30e-49 | 180 |
| MS.gene052089.t1 | MTR_4g104020 | 30.435 | 391 | 241 | 9 | 280 | 651 | 141 | 519 | 9.55e-48 | 176 |
| MS.gene052089.t1 | MTR_3g065980 | 29.610 | 385 | 245 | 8 | 282 | 651 | 166 | 539 | 9.81e-46 | 171 |
| MS.gene052089.t1 | MTR_7g074650 | 30.245 | 367 | 238 | 8 | 291 | 653 | 441 | 793 | 4.67e-43 | 166 |
| MS.gene052089.t1 | MTR_2g034260 | 30.233 | 387 | 244 | 8 | 283 | 651 | 205 | 583 | 4.83e-41 | 158 |
| MS.gene052089.t1 | MTR_3g022830 | 27.163 | 416 | 244 | 6 | 289 | 651 | 26 | 435 | 1.05e-39 | 151 |
| MS.gene052089.t1 | MTR_4g076140 | 26.464 | 427 | 245 | 7 | 288 | 651 | 48 | 468 | 3.18e-39 | 151 |
| MS.gene052089.t1 | MTR_2g034250 | 28.278 | 389 | 250 | 7 | 283 | 651 | 205 | 584 | 3.96e-38 | 149 |
| MS.gene052089.t1 | MTR_2g089100 | 26.185 | 401 | 255 | 8 | 288 | 654 | 52 | 445 | 3.15e-35 | 139 |
| MS.gene052089.t1 | MTR_4g076020 | 28.117 | 377 | 226 | 11 | 291 | 654 | 87 | 431 | 1.09e-34 | 137 |
| MS.gene052089.t1 | MTR_4g102790 | 24.227 | 388 | 268 | 10 | 282 | 653 | 286 | 663 | 1.31e-33 | 137 |
| MS.gene052089.t1 | MTR_4g077760 | 25.995 | 377 | 257 | 7 | 285 | 651 | 190 | 554 | 2.06e-33 | 135 |
| MS.gene052089.t1 | MTR_2g034280 | 27.013 | 385 | 257 | 8 | 283 | 651 | 198 | 574 | 2.32e-33 | 135 |
| MS.gene052089.t1 | MTR_4g097080 | 25.199 | 377 | 266 | 8 | 288 | 653 | 133 | 504 | 8.46e-33 | 133 |
| MS.gene052089.t1 | MTR_1g096030 | 27.020 | 396 | 243 | 12 | 288 | 651 | 77 | 458 | 7.67e-32 | 129 |
| MS.gene052089.t1 | MTR_7g109580 | 26.649 | 379 | 259 | 8 | 283 | 651 | 184 | 553 | 2.22e-30 | 126 |
| MS.gene052089.t1 | MTR_5g015490 | 25.781 | 384 | 261 | 9 | 288 | 653 | 114 | 491 | 2.39e-30 | 125 |
| MS.gene052089.t1 | MTR_1g069725 | 27.297 | 381 | 245 | 13 | 282 | 651 | 103 | 462 | 1.08e-29 | 123 |
| MS.gene052089.t1 | MTR_7g057230 | 28.674 | 279 | 192 | 4 | 374 | 651 | 384 | 656 | 6.06e-28 | 119 |
| MS.gene052089.t1 | MTR_5g058860 | 26.944 | 360 | 230 | 12 | 315 | 652 | 149 | 497 | 8.01e-28 | 118 |
| MS.gene052089.t1 | MTR_8g093070 | 24.868 | 378 | 245 | 15 | 293 | 654 | 144 | 498 | 4.23e-27 | 115 |
| MS.gene052089.t1 | MTR_3g072710 | 26.683 | 416 | 253 | 16 | 271 | 652 | 103 | 500 | 1.33e-26 | 114 |
| MS.gene052089.t1 | MTR_5g015950 | 22.300 | 426 | 278 | 9 | 278 | 654 | 27 | 448 | 6.89e-25 | 108 |
| MS.gene052089.t1 | MTR_3g053270 | 22.300 | 426 | 278 | 9 | 278 | 654 | 27 | 448 | 6.89e-25 | 108 |
| MS.gene052089.t1 | MTR_6g047750 | 26.667 | 345 | 223 | 10 | 323 | 651 | 331 | 661 | 1.82e-24 | 108 |
| MS.gene052089.t1 | MTR_5g009080 | 31.579 | 209 | 133 | 2 | 288 | 492 | 56 | 258 | 6.37e-24 | 105 |
| MS.gene052089.t1 | MTR_5g009080 | 30.872 | 149 | 102 | 1 | 504 | 651 | 329 | 477 | 2.40e-17 | 85.9 |
| MS.gene052089.t1 | MTR_4g095500 | 22.410 | 415 | 271 | 7 | 288 | 654 | 59 | 470 | 7.32e-23 | 102 |
| MS.gene052089.t1 | MTR_1g086970 | 23.164 | 354 | 244 | 8 | 315 | 651 | 135 | 477 | 8.81e-23 | 102 |
| MS.gene052089.t1 | MTR_2g099110 | 26.952 | 397 | 241 | 13 | 288 | 653 | 74 | 452 | 7.30e-22 | 99.4 |
| MS.gene052089.t1 | MTR_8g020840 | 24.750 | 400 | 242 | 15 | 288 | 651 | 171 | 547 | 3.43e-16 | 82.4 |
| MS.gene052089.t1 | MTR_0092s0100 | 23.181 | 371 | 261 | 10 | 289 | 651 | 376 | 730 | 4.32e-15 | 79.3 |
| MS.gene052089.t1 | MTR_0092s0100 | 23.181 | 371 | 261 | 10 | 289 | 651 | 373 | 727 | 4.58e-15 | 79.3 |
| MS.gene052089.t1 | MTR_4g026485 | 25.258 | 194 | 135 | 3 | 274 | 461 | 251 | 440 | 2.77e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052089.t1 | AT2G29060 | 43.265 | 631 | 301 | 13 | 50 | 653 | 56 | 656 | 6.63e-165 | 488 |
| MS.gene052089.t1 | AT2G37650 | 43.256 | 645 | 318 | 15 | 50 | 653 | 77 | 714 | 3.18e-163 | 485 |
| MS.gene052089.t1 | AT2G37650 | 43.256 | 645 | 318 | 15 | 50 | 653 | 65 | 702 | 3.47e-163 | 485 |
| MS.gene052089.t1 | AT2G29060 | 42.434 | 641 | 329 | 12 | 50 | 653 | 56 | 693 | 1.28e-161 | 480 |
| MS.gene052089.t1 | AT5G59450 | 50.968 | 465 | 211 | 8 | 203 | 654 | 140 | 600 | 3.31e-157 | 466 |
| MS.gene052089.t1 | AT1G07530 | 49.367 | 474 | 224 | 6 | 194 | 654 | 297 | 767 | 1.02e-154 | 465 |
| MS.gene052089.t1 | AT3G46600 | 51.670 | 449 | 193 | 6 | 215 | 654 | 116 | 549 | 6.59e-151 | 448 |
| MS.gene052089.t1 | AT3G46600 | 51.670 | 449 | 193 | 6 | 215 | 654 | 148 | 581 | 8.15e-151 | 449 |
| MS.gene052089.t1 | AT3G46600 | 56.757 | 370 | 157 | 2 | 288 | 654 | 4 | 373 | 1.58e-148 | 435 |
| MS.gene052089.t1 | AT2G29065 | 42.038 | 628 | 309 | 14 | 51 | 654 | 34 | 630 | 1.21e-145 | 437 |
| MS.gene052089.t1 | AT1G07520 | 44.606 | 482 | 248 | 6 | 184 | 654 | 58 | 531 | 1.45e-135 | 408 |
| MS.gene052089.t1 | AT1G07520 | 44.606 | 482 | 248 | 6 | 184 | 654 | 58 | 531 | 1.45e-135 | 408 |
| MS.gene052089.t1 | AT1G07520 | 44.606 | 482 | 248 | 6 | 184 | 654 | 223 | 696 | 4.34e-134 | 410 |
| MS.gene052089.t1 | AT1G07520 | 44.606 | 482 | 248 | 6 | 184 | 654 | 222 | 695 | 5.52e-134 | 409 |
| MS.gene052089.t1 | AT1G50600 | 33.962 | 371 | 242 | 2 | 284 | 651 | 155 | 525 | 7.61e-62 | 215 |
| MS.gene052089.t1 | AT1G50600 | 33.962 | 371 | 242 | 2 | 284 | 651 | 230 | 600 | 4.68e-61 | 214 |
| MS.gene052089.t1 | AT1G50600 | 33.962 | 371 | 242 | 2 | 284 | 651 | 226 | 596 | 4.71e-61 | 214 |
| MS.gene052089.t1 | AT5G48150 | 31.414 | 382 | 256 | 4 | 275 | 651 | 109 | 489 | 6.73e-57 | 201 |
| MS.gene052089.t1 | AT5G48150 | 31.414 | 382 | 256 | 4 | 275 | 651 | 109 | 489 | 6.73e-57 | 201 |
| MS.gene052089.t1 | AT5G48150 | 31.414 | 382 | 256 | 4 | 275 | 651 | 109 | 489 | 6.73e-57 | 201 |
| MS.gene052089.t1 | AT5G48150 | 31.414 | 382 | 256 | 4 | 275 | 651 | 109 | 489 | 6.73e-57 | 201 |
| MS.gene052089.t1 | AT2G04890 | 30.189 | 371 | 249 | 3 | 284 | 651 | 49 | 412 | 6.11e-53 | 187 |
| MS.gene052089.t1 | AT4G17230 | 30.214 | 374 | 258 | 2 | 283 | 653 | 153 | 526 | 1.55e-50 | 184 |
| MS.gene052089.t1 | AT4G17230 | 30.214 | 374 | 258 | 2 | 283 | 653 | 153 | 526 | 1.55e-50 | 184 |
| MS.gene052089.t1 | AT1G14920 | 31.733 | 375 | 239 | 9 | 282 | 651 | 166 | 528 | 2.24e-48 | 178 |
| MS.gene052089.t1 | AT3G03450 | 30.334 | 389 | 231 | 9 | 282 | 651 | 177 | 544 | 5.71e-47 | 174 |
| MS.gene052089.t1 | AT1G21450 | 28.261 | 368 | 260 | 3 | 288 | 651 | 225 | 592 | 1.04e-45 | 172 |
| MS.gene052089.t1 | AT2G01570 | 29.600 | 375 | 247 | 9 | 282 | 651 | 218 | 580 | 1.03e-44 | 169 |
| MS.gene052089.t1 | AT1G66350 | 31.217 | 378 | 231 | 11 | 282 | 651 | 149 | 505 | 1.30e-44 | 167 |
| MS.gene052089.t1 | AT3G54220 | 30.645 | 372 | 233 | 8 | 291 | 653 | 296 | 651 | 1.36e-44 | 169 |
| MS.gene052089.t1 | AT5G17490 | 30.159 | 378 | 240 | 9 | 282 | 651 | 154 | 515 | 9.43e-43 | 162 |
| MS.gene052089.t1 | AT5G66770 | 28.954 | 373 | 253 | 7 | 285 | 651 | 217 | 583 | 1.17e-42 | 163 |
| MS.gene052089.t1 | AT1G50420 | 25.522 | 431 | 251 | 7 | 285 | 651 | 54 | 478 | 7.76e-40 | 153 |
| MS.gene052089.t1 | AT3G50650 | 26.933 | 375 | 256 | 7 | 289 | 651 | 173 | 541 | 1.90e-38 | 150 |
| MS.gene052089.t1 | AT5G41920 | 27.979 | 386 | 247 | 9 | 278 | 651 | 33 | 399 | 1.12e-37 | 145 |
| MS.gene052089.t1 | AT4G37650 | 25.310 | 403 | 248 | 11 | 287 | 653 | 145 | 530 | 2.83e-34 | 137 |
| MS.gene052089.t1 | AT5G52510 | 26.525 | 377 | 253 | 8 | 291 | 651 | 271 | 639 | 4.21e-32 | 132 |
| MS.gene052089.t1 | AT1G63100 | 25.641 | 351 | 244 | 6 | 284 | 626 | 248 | 589 | 6.32e-32 | 132 |
| MS.gene052089.t1 | AT1G63100 | 25.641 | 351 | 244 | 6 | 284 | 626 | 273 | 614 | 6.67e-32 | 132 |
| MS.gene052089.t1 | AT4G08250 | 28.947 | 342 | 222 | 9 | 322 | 651 | 144 | 476 | 2.25e-30 | 125 |
| MS.gene052089.t1 | AT3G49950 | 27.013 | 385 | 257 | 10 | 288 | 653 | 30 | 409 | 2.55e-29 | 121 |
| MS.gene052089.t1 | AT1G55580 | 23.636 | 385 | 227 | 9 | 319 | 651 | 75 | 444 | 1.32e-22 | 101 |
| MS.gene052089.t1 | AT3G13840 | 24.352 | 386 | 246 | 13 | 288 | 651 | 148 | 509 | 3.12e-20 | 95.1 |
| MS.gene052089.t1 | AT4G00150 | 22.251 | 382 | 261 | 10 | 279 | 651 | 199 | 553 | 2.37e-11 | 67.4 |
| MS.gene052089.t1 | AT5G67411 | 30.198 | 202 | 124 | 9 | 401 | 589 | 1 | 198 | 5.76e-11 | 62.8 |
Find 141 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACAAGCTATAACATTTA+TGG | 0.192701 | 2.2:+5001568 | None:intergenic |
| CATCGACTACAAAATCTTTA+TGG | 0.219672 | 2.2:+5001417 | None:intergenic |
| CCATCTTCACCTTCTTCTTC+TGG | 0.229698 | 2.2:-5003198 | MS.gene052089:CDS |
| AGGCAACACTCTTCGTCTTT+TGG | 0.252568 | 2.2:-5002352 | MS.gene052089:CDS |
| TATGTATCTTAGGATGTTAT+TGG | 0.255000 | 2.2:+5003134 | None:intergenic |
| AGCGTTCATGTTATTGATTT+TGG | 0.271020 | 2.2:-5002121 | MS.gene052089:CDS |
| CCTGACCTGCCACTGCTTGT+AGG | 0.274499 | 2.2:+5001517 | None:intergenic |
| CCTCCAAAGCTTCGAATTAC+AGG | 0.281535 | 2.2:-5002037 | MS.gene052089:CDS |
| GTTACTTGGTTTACTGAGTT+TGG | 0.288731 | 2.2:+5003246 | None:intergenic |
| CACTATTTCGAAAATCGTTT+TGG | 0.292516 | 2.2:+5002156 | None:intergenic |
| ACTCCATGGAAGAATACTTT+TGG | 0.301118 | 2.2:+5001743 | None:intergenic |
| GCAGGAATGTTTAAGACTTC+AGG | 0.330542 | 2.2:-5003058 | MS.gene052089:CDS |
| CGCGATCGAAATTTCCATTT+GGG | 0.332531 | 2.2:+5002971 | None:intergenic |
| AAGTCCTTCTATGATGTTCT+TGG | 0.346747 | 2.2:-5003027 | MS.gene052089:CDS |
| ACAACTTCATTGCACAGAAA+TGG | 0.347339 | 2.2:-5001913 | MS.gene052089:CDS |
| TTTGAATGCTTTATCAGCTT+GGG | 0.351490 | 2.2:-5001354 | MS.gene052089:CDS |
| GGATGTCACTTATGTATCTT+AGG | 0.358360 | 2.2:+5003124 | None:intergenic |
| ATTCCTGTAATTCGAAGCTT+TGG | 0.359837 | 2.2:+5002034 | None:intergenic |
| GCGCGATCGAAATTTCCATT+TGG | 0.365718 | 2.2:+5002970 | None:intergenic |
| GCATCACATAATGTTGATTC+AGG | 0.366614 | 2.2:-5002526 | MS.gene052089:CDS |
| TTAGCTCATTACTTTGCTAA+TGG | 0.370579 | 2.2:-5002313 | MS.gene052089:CDS |
| TAAAGGACTTTGTAGTTGTA+TGG | 0.371367 | 2.2:+5002855 | None:intergenic |
| AAATCTTGCAGAAAGGTGTT+TGG | 0.378133 | 2.2:+5003276 | None:intergenic |
| CATTTGGTGAAGGCTGGTTA+TGG | 0.381462 | 2.2:+5003004 | None:intergenic |
| TCTTCTGGCACAAGCTCAAA+TGG | 0.388620 | 2.2:-5003183 | MS.gene052089:CDS |
| TTTGGGTCAGTGCTATCATT+TGG | 0.388999 | 2.2:+5002988 | None:intergenic |
| AGCTTCAACACAGCTTCTCT+TGG | 0.390505 | 2.2:+5001782 | None:intergenic |
| CCTCTTGATGTGGCAACTGC+TGG | 0.394427 | 2.2:-5002250 | MS.gene052089:CDS |
| TTCTGACGAGGCACGGCCAC+TGG | 0.399566 | 2.2:+5002083 | None:intergenic |
| TCAGTAAACCAAGTAACAAA+TGG | 0.401437 | 2.2:-5003240 | MS.gene052089:CDS |
| ATGCTTGAGAGAGGGTTGTT+TGG | 0.402972 | 2.2:-5001599 | MS.gene052089:CDS |
| CCTTGTGTCTCGATGACAAC+TGG | 0.405616 | 2.2:+5002799 | None:intergenic |
| ATTCAAACCCATTTGTTACT+TGG | 0.405951 | 2.2:+5003232 | None:intergenic |
| CCTACAAGCAGTGGCAGGTC+AGG | 0.408410 | 2.2:-5001517 | MS.gene052089:CDS |
| GAGCTGGGTTCAAGCAAATC+AGG | 0.413441 | 2.2:-5001487 | MS.gene052089:CDS |
| GTTTCCTCCACCCTTTCTGC+AGG | 0.420825 | 2.2:+5001986 | None:intergenic |
| GCAAAATCCCTGTATGTTGC+AGG | 0.423000 | 2.2:-5003076 | MS.gene052089:CDS |
| CAACATTATGTGATGCTTGT+TGG | 0.426130 | 2.2:+5002533 | None:intergenic |
| CAACTTCATTGCACAGAAAT+GGG | 0.427023 | 2.2:-5001912 | MS.gene052089:CDS |
| TGCCACTGCTTGTAGGTCTC+AGG | 0.429715 | 2.2:+5001524 | None:intergenic |
| ACCATTGTCATAACGGAACT+TGG | 0.436424 | 2.2:-5002771 | MS.gene052089:CDS |
| ATCGTTGTTTGATATGTTTG+AGG | 0.437931 | 2.2:-5001654 | MS.gene052089:CDS |
| ATGTTATTGGAATATCTTGT+CGG | 0.439317 | 2.2:+5003147 | None:intergenic |
| TTCAATGCCACAGTTTCATC+AGG | 0.440053 | 2.2:+5001809 | None:intergenic |
| TAAACATTCCTGCAACATAC+AGG | 0.459008 | 2.2:+5003068 | None:intergenic |
| TGCTATCATTTGGTGAAGGC+TGG | 0.460261 | 2.2:+5002998 | None:intergenic |
| AAGCTCAAATGGAGAATCCT+TGG | 0.463718 | 2.2:-5003172 | MS.gene052089:CDS |
| CATGGATGAAGAAGATGACT+TGG | 0.465816 | 2.2:-5003100 | MS.gene052089:CDS |
| GCAGAAAGGGTGGAGGAAAC+CGG | 0.469253 | 2.2:-5001983 | MS.gene052089:CDS |
| AAGCTGTGTTGAAGCTGATC+AGG | 0.474231 | 2.2:-5001775 | MS.gene052089:CDS |
| TACAAACAATGCCGCGGCTG+TGG | 0.476659 | 2.2:-5002458 | MS.gene052089:CDS |
| GTGCTTCCTTAAACCGAGTC+AGG | 0.477530 | 2.2:+5001690 | None:intergenic |
| GTCATAACGGAACTTGGAGT+TGG | 0.479661 | 2.2:-5002765 | MS.gene052089:CDS |
| AATGGCAGCAGCTGCATCGC+TGG | 0.480099 | 2.2:-5002931 | MS.gene052089:CDS |
| AGTACCTCATCTAAAATCTC+TGG | 0.483079 | 2.2:+5002589 | None:intergenic |
| AGCTTGTGAGGGTGCAGAAA+GGG | 0.483774 | 2.2:-5001555 | MS.gene052089:CDS |
| TAGTCGATGTGGATGGTAAG+TGG | 0.492425 | 2.2:-5001403 | MS.gene052089:CDS |
| ATGCCGCGGCTGTGGATTTG+TGG | 0.495407 | 2.2:-5002450 | MS.gene052089:CDS |
| GGAATTGAGCTTCCTCGGCC+AGG | 0.495711 | 2.2:-5002016 | MS.gene052089:CDS |
| CGAAGCTTTGGAGGACCACC+AGG | 0.497005 | 2.2:+5002046 | None:intergenic |
| CCTGTAATTCGAAGCTTTGG+AGG | 0.497546 | 2.2:+5002037 | None:intergenic |
| AATGATAGCACTGACCCAAA+TGG | 0.500557 | 2.2:-5002985 | MS.gene052089:CDS |
| TGGAGGATCTAAAGATAGAC+AGG | 0.500668 | 2.2:-5001877 | MS.gene052089:CDS |
| ATGGCCAAGAACATCATAGA+AGG | 0.501527 | 2.2:+5003023 | None:intergenic |
| TAATGGTCTTGAGATAAGAT+TGG | 0.503318 | 2.2:-5002296 | MS.gene052089:CDS |
| CTTTCTGCAGGTCTAAATCC+TGG | 0.504296 | 2.2:+5001998 | None:intergenic |
| ATGAGCTACTCAAACAGATT+AGG | 0.511922 | 2.2:-5002372 | MS.gene052089:CDS |
| CAGTAAACCAAGTAACAAAT+GGG | 0.514266 | 2.2:-5003239 | MS.gene052089:CDS |
| TTACAGGAATTGAGCTTCCT+CGG | 0.515630 | 2.2:-5002021 | MS.gene052089:CDS |
| TGTCTATCTTTAGATCCTCC+AGG | 0.515870 | 2.2:+5001879 | None:intergenic |
| CAGGTCAGGAATAAGAGAGC+TGG | 0.517229 | 2.2:-5001503 | MS.gene052089:CDS |
| AAAACTTCTTCCACCATCAC+TGG | 0.518831 | 2.2:+5002730 | None:intergenic |
| CGGTGCGCTATAACTTCCAT+TGG | 0.522432 | 2.2:+5001718 | None:intergenic |
| AGGATTTAGACCTGCAGAAA+GGG | 0.522516 | 2.2:-5001996 | MS.gene052089:CDS |
| CTTTAGATCCTCCAGGCAGA+TGG | 0.523098 | 2.2:+5001886 | None:intergenic |
| AATCCAAAAGTATTCTTCCA+TGG | 0.523808 | 2.2:-5001746 | MS.gene052089:CDS |
| TTCTTCCATGGAGTTTCCAA+TGG | 0.524367 | 2.2:-5001734 | MS.gene052089:CDS |
| ACATCAAGAGGCTGATATGA+TGG | 0.524913 | 2.2:+5002262 | None:intergenic |
| GGAATATCTTGTCGGTTCCA+AGG | 0.526658 | 2.2:+5003155 | None:intergenic |
| GAGCTTGTGCCAGAAGAAGA+AGG | 0.528577 | 2.2:+5003189 | None:intergenic |
| CTGTGGCGAGCTACGATCAA+AGG | 0.536487 | 2.2:-5002402 | MS.gene052089:CDS |
| GAAATGGGAAACCATCTGCC+TGG | 0.536630 | 2.2:-5001897 | MS.gene052089:CDS |
| GTAGTTTGCTAGACGCCGTC+CGG | 0.538457 | 2.2:+5001964 | None:intergenic |
| CAGGATTTAGACCTGCAGAA+AGG | 0.540009 | 2.2:-5001997 | MS.gene052089:CDS |
| GCAATGAAGTTGTATTCAAA+TGG | 0.550757 | 2.2:+5001923 | None:intergenic |
| AGTCGATGTGGATGGTAAGT+GGG | 0.556259 | 2.2:-5001402 | MS.gene052089:CDS |
| TAATGTTGATTCAGGAGGAA+AGG | 0.556753 | 2.2:-5002518 | MS.gene052089:CDS |
| AACACTAAAATCTTGCAGAA+AGG | 0.557457 | 2.2:+5003269 | None:intergenic |
| TTGTGCACATTGATTTAGCA+TGG | 0.558170 | 2.2:+5002426 | None:intergenic |
| GCATTTGTCATTCTCTGCAA+AGG | 0.559014 | 2.2:+5002187 | None:intergenic |
| ATGCCACAGTTTCATCAGGA+AGG | 0.560068 | 2.2:+5001813 | None:intergenic |
| CCAGCAGTTGCCACATCAAG+AGG | 0.562934 | 2.2:+5002250 | None:intergenic |
| GGTGCTAACCATTGTCATAA+CGG | 0.564395 | 2.2:-5002778 | MS.gene052089:CDS |
| AACTTCCATTGGAAACTCCA+TGG | 0.564423 | 2.2:+5001729 | None:intergenic |
| TGAGACCTACAAGCAGTGGC+AGG | 0.569446 | 2.2:-5001522 | MS.gene052089:CDS |
| TCCAAGTTCCGTTATGACAA+TGG | 0.569856 | 2.2:+5002770 | None:intergenic |
| AACTGGATCAGCTTCTGTCA+AGG | 0.571830 | 2.2:+5002816 | None:intergenic |
| CATAAATGTTATAGCTTGTG+AGG | 0.573605 | 2.2:-5001567 | MS.gene052089:CDS |
| CAGAGATTGATGCTTGAGAG+AGG | 0.576892 | 2.2:-5001608 | MS.gene052089:CDS |
| AGGTCAGGAATAAGAGAGCT+GGG | 0.580907 | 2.2:-5001502 | MS.gene052089:CDS |
| ATACATAAGTGACATCCTCA+TGG | 0.582153 | 2.2:-5003118 | MS.gene052089:CDS |
| TGTAATGAACAAGAGGGAAG+AGG | 0.582616 | 2.2:-5002652 | MS.gene052089:CDS |
| TATCAAACAACGATGAGAAG+TGG | 0.582630 | 2.2:+5001663 | None:intergenic |
| TGACATTCAGCCAGTGATGG+TGG | 0.583132 | 2.2:-5002740 | MS.gene052089:CDS |
| CCAGAAGAAGAAGGTGAAGA+TGG | 0.592856 | 2.2:+5003198 | None:intergenic |
| CAAAGTAATGAGCTAAACGC+TGG | 0.593615 | 2.2:+5002320 | None:intergenic |
| AAACATTCCTGCAACATACA+GGG | 0.594260 | 2.2:+5003069 | None:intergenic |
| TGATACTTGTAATGAACAAG+AGG | 0.595387 | 2.2:-5002659 | MS.gene052089:CDS |
| GAGGTACTGCTTTATCAGAA+AGG | 0.596446 | 2.2:-5002574 | MS.gene052089:CDS |
| ATCATATCAGCCTCTTGATG+TGG | 0.597759 | 2.2:-5002260 | MS.gene052089:CDS |
| ATTTAGACCTGCAGAAAGGG+TGG | 0.601556 | 2.2:-5001993 | MS.gene052089:CDS |
| AGGGTGCAGAAAGGGTTGAA+AGG | 0.602354 | 2.2:-5001547 | MS.gene052089:CDS |
| GATAGTCTTCTGACGAGGCA+CGG | 0.602753 | 2.2:+5002076 | None:intergenic |
| ACCTCATCTAAAATCTCTGG+TGG | 0.604084 | 2.2:+5002592 | None:intergenic |
| GCAGGTCTAAATCCTGGCCG+AGG | 0.605176 | 2.2:+5002004 | None:intergenic |
| TAGCTTGTGAGGGTGCAGAA+AGG | 0.607236 | 2.2:-5001556 | MS.gene052089:CDS |
| AAGATTCGAATTCGACGACA+TGG | 0.612871 | 2.2:+5002881 | None:intergenic |
| CCAGTTGTCATCGAGACACA+AGG | 0.613282 | 2.2:-5002799 | MS.gene052089:CDS |
| TGGGTTCAAGCAAATCAGGT+TGG | 0.613823 | 2.2:-5001483 | MS.gene052089:CDS |
| ACAAGAGGGAAGAGGTAGCA+AGG | 0.614187 | 2.2:-5002644 | MS.gene052089:CDS |
| TAGACCTGCAGAAAGGGTGG+AGG | 0.621359 | 2.2:-5001990 | MS.gene052089:CDS |
| GGCCTGAGACCTACAAGCAG+TGG | 0.622095 | 2.2:-5001526 | MS.gene052089:CDS |
| GATACTTGTAATGAACAAGA+GGG | 0.631778 | 2.2:-5002658 | MS.gene052089:CDS |
| TCAGTGCTATCATTTGGTGA+AGG | 0.638613 | 2.2:+5002994 | None:intergenic |
| TGAAACGAAAACAATCGTGA+AGG | 0.640625 | 2.2:-5001444 | MS.gene052089:CDS |
| GAATGACATTCAGCCAGTGA+TGG | 0.641311 | 2.2:-5002743 | MS.gene052089:CDS |
| TCACATAATGTTGATTCAGG+AGG | 0.642164 | 2.2:-5002523 | MS.gene052089:CDS |
| ATCTACTACAAACAATGCCG+CGG | 0.648638 | 2.2:-5002464 | MS.gene052089:CDS |
| GGTCCACAAATCCACAGCCG+CGG | 0.657187 | 2.2:+5002447 | None:intergenic |
| GAACCTTCCTGATGAAACTG+TGG | 0.660816 | 2.2:-5001816 | MS.gene052089:CDS |
| AAATCAATGTGCACAAGCTG+TGG | 0.661819 | 2.2:-5002419 | MS.gene052089:CDS |
| TGATTCAGGAGGAAAGGCAA+AGG | 0.662454 | 2.2:-5002512 | MS.gene052089:CDS |
| AGAGATTGATGCTTGAGAGA+GGG | 0.685595 | 2.2:-5001607 | MS.gene052089:CDS |
| AGACTATCATTAAGACCTGG+TGG | 0.687440 | 2.2:-5002061 | MS.gene052089:CDS |
| AGTCATCTTCTTCATCCATG+AGG | 0.688746 | 2.2:+5003103 | None:intergenic |
| AAAGGGTGGAGGAAACCGGA+CGG | 0.693036 | 2.2:-5001979 | MS.gene052089:CDS |
| AGAAGACTATCATTAAGACC+TGG | 0.694335 | 2.2:-5002064 | MS.gene052089:CDS |
| ATAAATGTTATAGCTTGTGA+GGG | 0.694950 | 2.2:-5001566 | MS.gene052089:CDS |
| ATGGGAAACCATCTGCCTGG+AGG | 0.697664 | 2.2:-5001894 | MS.gene052089:CDS |
| AATCTCTGCATGTCTTCACG+AGG | 0.708631 | 2.2:+5001623 | None:intergenic |
| TTAATGATAGTCTTCTGACG+AGG | 0.747045 | 2.2:+5002071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTTTGGAATTTTCTA+TGG | - | chr2.2:5002519-5002538 | MS.gene052089:CDS | 20.0% |
| !!! | GCATAGTTTTTTTCTATTAA+AGG | + | chr2.2:5001793-5001812 | None:intergenic | 20.0% |
| ! | ATGTTATTGGAATATCTTGT+CGG | + | chr2.2:5001484-5001503 | None:intergenic | 25.0% |
| ! | TATGTATCTTAGGATGTTAT+TGG | + | chr2.2:5001497-5001516 | None:intergenic | 25.0% |
| !! | ATAAATGTTATAGCTTGTGA+GGG | - | chr2.2:5003062-5003081 | MS.gene052089:CDS | 25.0% |
| AACACTAAAATCTTGCAGAA+AGG | + | chr2.2:5001362-5001381 | None:intergenic | 30.0% | |
| AGAAAAAAGAAGTCGTAAGA+TGG | - | chr2.2:5001936-5001955 | MS.gene052089:CDS | 30.0% | |
| ATCGTTGTTTGATATGTTTG+AGG | - | chr2.2:5002974-5002993 | MS.gene052089:CDS | 30.0% | |
| CAGTAAACCAAGTAACAAAT+GGG | - | chr2.2:5001389-5001408 | MS.gene052089:CDS | 30.0% | |
| CTCACAAGCTATAACATTTA+TGG | + | chr2.2:5003063-5003082 | None:intergenic | 30.0% | |
| GATACTTGTAATGAACAAGA+GGG | - | chr2.2:5001970-5001989 | MS.gene052089:CDS | 30.0% | |
| GCAATGAAGTTGTATTCAAA+TGG | + | chr2.2:5002708-5002727 | None:intergenic | 30.0% | |
| TAAAGGACTTTGTAGTTGTA+TGG | + | chr2.2:5001776-5001795 | None:intergenic | 30.0% | |
| TCAGTAAACCAAGTAACAAA+TGG | - | chr2.2:5001388-5001407 | MS.gene052089:CDS | 30.0% | |
| TGATACTTGTAATGAACAAG+AGG | - | chr2.2:5001969-5001988 | MS.gene052089:CDS | 30.0% | |
| TTAGCTCATTACTTTGCTAA+TGG | - | chr2.2:5002315-5002334 | MS.gene052089:CDS | 30.0% | |
| TTTGAATGCTTTATCAGCTT+GGG | - | chr2.2:5003274-5003293 | MS.gene052089:CDS | 30.0% | |
| ! | ATTCAAACCCATTTGTTACT+TGG | + | chr2.2:5001399-5001418 | None:intergenic | 30.0% |
| ! | CACTATTTCGAAAATCGTTT+TGG | + | chr2.2:5002475-5002494 | None:intergenic | 30.0% |
| ! | CATAAATGTTATAGCTTGTG+AGG | - | chr2.2:5003061-5003080 | MS.gene052089:CDS | 30.0% |
| ! | CATCGACTACAAAATCTTTA+TGG | + | chr2.2:5003214-5003233 | None:intergenic | 30.0% |
| ! | TAAAGATTTTGTAGTCGATG+TGG | - | chr2.2:5003214-5003233 | MS.gene052089:CDS | 30.0% |
| ! | TAATGGTCTTGAGATAAGAT+TGG | - | chr2.2:5002332-5002351 | MS.gene052089:CDS | 30.0% |
| ! | TTTTGAATGCTTTATCAGCT+TGG | - | chr2.2:5003273-5003292 | MS.gene052089:CDS | 30.0% |
| !! | AATCCAAAAGTATTCTTCCA+TGG | - | chr2.2:5002882-5002901 | MS.gene052089:CDS | 30.0% |
| !!! | AGCGTTCATGTTATTGATTT+TGG | - | chr2.2:5002507-5002526 | MS.gene052089:CDS | 30.0% |
| !!! | ATCTTACGACTTCTTTTTTC+TGG | + | chr2.2:5001937-5001956 | None:intergenic | 30.0% |
| AAACATTCCTGCAACATACA+GGG | + | chr2.2:5001562-5001581 | None:intergenic | 35.0% | |
| AAGTCCTTCTATGATGTTCT+TGG | - | chr2.2:5001601-5001620 | MS.gene052089:CDS | 35.0% | |
| ACAACTTCATTGCACAGAAA+TGG | - | chr2.2:5002715-5002734 | MS.gene052089:CDS | 35.0% | |
| AGAAGACTATCATTAAGACC+TGG | - | chr2.2:5002564-5002583 | MS.gene052089:CDS | 35.0% | |
| ATACATAAGTGACATCCTCA+TGG | - | chr2.2:5001510-5001529 | MS.gene052089:CDS | 35.0% | |
| ATGAGCTACTCAAACAGATT+AGG | - | chr2.2:5002256-5002275 | MS.gene052089:CDS | 35.0% | |
| ATTCCTGTAATTCGAAGCTT+TGG | + | chr2.2:5002597-5002616 | None:intergenic | 35.0% | |
| CAACATTATGTGATGCTTGT+TGG | + | chr2.2:5002098-5002117 | None:intergenic | 35.0% | |
| CAACTTCATTGCACAGAAAT+GGG | - | chr2.2:5002716-5002735 | MS.gene052089:CDS | 35.0% | |
| GTTACTTGGTTTACTGAGTT+TGG | + | chr2.2:5001385-5001404 | None:intergenic | 35.0% | |
| TAAACATTCCTGCAACATAC+AGG | + | chr2.2:5001563-5001582 | None:intergenic | 35.0% | |
| TATCAAACAACGATGAGAAG+TGG | + | chr2.2:5002968-5002987 | None:intergenic | 35.0% | |
| TGAAACGAAAACAATCGTGA+AGG | - | chr2.2:5003184-5003203 | MS.gene052089:CDS | 35.0% | |
| TTAAACCGAGTCAGGAAAAA+CGG | + | chr2.2:5002933-5002952 | None:intergenic | 35.0% | |
| TTAATGATAGTCTTCTGACG+AGG | + | chr2.2:5002560-5002579 | None:intergenic | 35.0% | |
| ! | ACTCCATGGAAGAATACTTT+TGG | + | chr2.2:5002888-5002907 | None:intergenic | 35.0% |
| ! | AGTACCTCATCTAAAATCTC+TGG | + | chr2.2:5002042-5002061 | None:intergenic | 35.0% |
| ! | GAATTTTCTATGGTTTCCAG+TGG | - | chr2.2:5002529-5002548 | MS.gene052089:CDS | 35.0% |
| ! | GGATGTCACTTATGTATCTT+AGG | + | chr2.2:5001507-5001526 | None:intergenic | 35.0% |
| !! | AAATCTTGCAGAAAGGTGTT+TGG | + | chr2.2:5001355-5001374 | None:intergenic | 35.0% |
| !! | GCATCACATAATGTTGATTC+AGG | - | chr2.2:5002102-5002121 | MS.gene052089:CDS | 35.0% |
| !! | TAATGTTGATTCAGGAGGAA+AGG | - | chr2.2:5002110-5002129 | MS.gene052089:CDS | 35.0% |
| !! | TCACATAATGTTGATTCAGG+AGG | - | chr2.2:5002105-5002124 | MS.gene052089:CDS | 35.0% |
| !! | TTGTGCACATTGATTTAGCA+TGG | + | chr2.2:5002205-5002224 | None:intergenic | 35.0% |
| !!! | CTTTTTTCTGGTACTGTTGA+AGG | + | chr2.2:5001925-5001944 | None:intergenic | 35.0% |
| AAAACTTCTTCCACCATCAC+TGG | + | chr2.2:5001901-5001920 | None:intergenic | 40.0% | |
| AAATCAATGTGCACAAGCTG+TGG | - | chr2.2:5002209-5002228 | MS.gene052089:CDS | 40.0% | |
| AACTTCCATTGGAAACTCCA+TGG | + | chr2.2:5002902-5002921 | None:intergenic | 40.0% | |
| AAGATTCGAATTCGACGACA+TGG | + | chr2.2:5001750-5001769 | None:intergenic | 40.0% | |
| AAGCTCAAATGGAGAATCCT+TGG | - | chr2.2:5001456-5001475 | MS.gene052089:CDS | 40.0% | |
| ACATCAAGAGGCTGATATGA+TGG | + | chr2.2:5002369-5002388 | None:intergenic | 40.0% | |
| AGACTATCATTAAGACCTGG+TGG | - | chr2.2:5002567-5002586 | MS.gene052089:CDS | 40.0% | |
| AGAGATTGATGCTTGAGAGA+GGG | - | chr2.2:5003021-5003040 | MS.gene052089:CDS | 40.0% | |
| AGGATTTAGACCTGCAGAAA+GGG | - | chr2.2:5002632-5002651 | MS.gene052089:CDS | 40.0% | |
| AGTCATCTTCTTCATCCATG+AGG | + | chr2.2:5001528-5001547 | None:intergenic | 40.0% | |
| ATCATATCAGCCTCTTGATG+TGG | - | chr2.2:5002368-5002387 | MS.gene052089:CDS | 40.0% | |
| ATCTACTACAAACAATGCCG+CGG | - | chr2.2:5002164-5002183 | MS.gene052089:CDS | 40.0% | |
| ATGGCCAAGAACATCATAGA+AGG | + | chr2.2:5001608-5001627 | None:intergenic | 40.0% | |
| CAAAGTAATGAGCTAAACGC+TGG | + | chr2.2:5002311-5002330 | None:intergenic | 40.0% | |
| CATGGATGAAGAAGATGACT+TGG | - | chr2.2:5001528-5001547 | MS.gene052089:CDS | 40.0% | |
| CGCGATCGAAATTTCCATTT+GGG | + | chr2.2:5001660-5001679 | None:intergenic | 40.0% | |
| GCATTTGTCATTCTCTGCAA+AGG | + | chr2.2:5002444-5002463 | None:intergenic | 40.0% | |
| GGTGCTAACCATTGTCATAA+CGG | - | chr2.2:5001850-5001869 | MS.gene052089:CDS | 40.0% | |
| TCCAAGTTCCGTTATGACAA+TGG | + | chr2.2:5001861-5001880 | None:intergenic | 40.0% | |
| TGGAGGATCTAAAGATAGAC+AGG | - | chr2.2:5002751-5002770 | MS.gene052089:CDS | 40.0% | |
| TGTAATGAACAAGAGGGAAG+AGG | - | chr2.2:5001976-5001995 | MS.gene052089:CDS | 40.0% | |
| TGTCTATCTTTAGATCCTCC+AGG | + | chr2.2:5002752-5002771 | None:intergenic | 40.0% | |
| TTACAGGAATTGAGCTTCCT+CGG | - | chr2.2:5002607-5002626 | MS.gene052089:CDS | 40.0% | |
| TTCAATGCCACAGTTTCATC+AGG | + | chr2.2:5002822-5002841 | None:intergenic | 40.0% | |
| TTCTTCCATGGAGTTTCCAA+TGG | - | chr2.2:5002894-5002913 | MS.gene052089:CDS | 40.0% | |
| TTTGGGTCAGTGCTATCATT+TGG | + | chr2.2:5001643-5001662 | None:intergenic | 40.0% | |
| ! | ACCATTGTCATAACGGAACT+TGG | - | chr2.2:5001857-5001876 | MS.gene052089:CDS | 40.0% |
| ! | ACCTCATCTAAAATCTCTGG+TGG | + | chr2.2:5002039-5002058 | None:intergenic | 40.0% |
| ! | GATTTTGTAGTCGATGTGGA+TGG | - | chr2.2:5003218-5003237 | MS.gene052089:CDS | 40.0% |
| ! | GCAGGAATGTTTAAGACTTC+AGG | - | chr2.2:5001570-5001589 | MS.gene052089:CDS | 40.0% |
| ! | TCAGTGCTATCATTTGGTGA+AGG | + | chr2.2:5001637-5001656 | None:intergenic | 40.0% |
| !! | AATGATAGCACTGACCCAAA+TGG | - | chr2.2:5001643-5001662 | MS.gene052089:CDS | 40.0% |
| !! | GAGGTACTGCTTTATCAGAA+AGG | - | chr2.2:5002054-5002073 | MS.gene052089:CDS | 40.0% |
| !!! | GCTGCTAGTTTTGAGAGAAA+TGG | - | chr2.2:5001679-5001698 | MS.gene052089:CDS | 40.0% |
| !!! | GTTTTTCCTGACTCGGTTTA+AGG | - | chr2.2:5002932-5002951 | MS.gene052089:CDS | 40.0% |
| AACTGGATCAGCTTCTGTCA+AGG | + | chr2.2:5001815-5001834 | None:intergenic | 45.0% | |
| AAGCTGTGTTGAAGCTGATC+AGG | - | chr2.2:5002853-5002872 | MS.gene052089:CDS | 45.0% | |
| AATCTCTGCATGTCTTCACG+AGG | + | chr2.2:5003008-5003027 | None:intergenic | 45.0% | |
| AGCTTCAACACAGCTTCTCT+TGG | + | chr2.2:5002849-5002868 | None:intergenic | 45.0% | |
| AGGTCAGGAATAAGAGAGCT+GGG | - | chr2.2:5003126-5003145 | MS.gene052089:CDS | 45.0% | |
| AGTCGATGTGGATGGTAAGT+GGG | - | chr2.2:5003226-5003245 | MS.gene052089:CDS | 45.0% | |
| ATGCCACAGTTTCATCAGGA+AGG | + | chr2.2:5002818-5002837 | None:intergenic | 45.0% | |
| ATGCTTGAGAGAGGGTTGTT+TGG | - | chr2.2:5003029-5003048 | MS.gene052089:CDS | 45.0% | |
| ATTTAGACCTGCAGAAAGGG+TGG | - | chr2.2:5002635-5002654 | MS.gene052089:CDS | 45.0% | |
| CAGAGATTGATGCTTGAGAG+AGG | - | chr2.2:5003020-5003039 | MS.gene052089:CDS | 45.0% | |
| CAGGATTTAGACCTGCAGAA+AGG | - | chr2.2:5002631-5002650 | MS.gene052089:CDS | 45.0% | |
| CCAGAAGAAGAAGGTGAAGA+TGG | + | chr2.2:5001433-5001452 | None:intergenic | 45.0% | |
| CCATCTTCACCTTCTTCTTC+TGG | - | chr2.2:5001430-5001449 | MS.gene052089:CDS | 45.0% | |
| CCTCCAAAGCTTCGAATTAC+AGG | - | chr2.2:5002591-5002610 | MS.gene052089:CDS | 45.0% | |
| CTTTCTGCAGGTCTAAATCC+TGG | + | chr2.2:5002633-5002652 | None:intergenic | 45.0% | |
| GAACCTTCCTGATGAAACTG+TGG | - | chr2.2:5002812-5002831 | MS.gene052089:CDS | 45.0% | |
| GAATGACATTCAGCCAGTGA+TGG | - | chr2.2:5001885-5001904 | MS.gene052089:CDS | 45.0% | |
| GCAAAATCCCTGTATGTTGC+AGG | - | chr2.2:5001552-5001571 | MS.gene052089:CDS | 45.0% | |
| GCGCGATCGAAATTTCCATT+TGG | + | chr2.2:5001661-5001680 | None:intergenic | 45.0% | |
| TAGTCGATGTGGATGGTAAG+TGG | - | chr2.2:5003225-5003244 | MS.gene052089:CDS | 45.0% | |
| TCTTCTGGCACAAGCTCAAA+TGG | - | chr2.2:5001445-5001464 | MS.gene052089:CDS | 45.0% | |
| TGATTCAGGAGGAAAGGCAA+AGG | - | chr2.2:5002116-5002135 | MS.gene052089:CDS | 45.0% | |
| TGGGTTCAAGCAAATCAGGT+TGG | - | chr2.2:5003145-5003164 | MS.gene052089:CDS | 45.0% | |
| ! | AGGCAACACTCTTCGTCTTT+TGG | - | chr2.2:5002276-5002295 | MS.gene052089:CDS | 45.0% |
| ! | CATTTGGTGAAGGCTGGTTA+TGG | + | chr2.2:5001627-5001646 | None:intergenic | 45.0% |
| ! | CCTGTAATTCGAAGCTTTGG+AGG | + | chr2.2:5002594-5002613 | None:intergenic | 45.0% |
| ! | GCAACACTCTTCGTCTTTTG+GGG | - | chr2.2:5002278-5002297 | MS.gene052089:CDS | 45.0% |
| ! | GCCACCAGAGATTTTAGATG+AGG | - | chr2.2:5002035-5002054 | MS.gene052089:CDS | 45.0% |
| ! | GGCAACACTCTTCGTCTTTT+GGG | - | chr2.2:5002277-5002296 | MS.gene052089:CDS | 45.0% |
| ! | GTCATAACGGAACTTGGAGT+TGG | - | chr2.2:5001863-5001882 | MS.gene052089:CDS | 45.0% |
| ! | TGCTATCATTTGGTGAAGGC+TGG | + | chr2.2:5001633-5001652 | None:intergenic | 45.0% |
| !! | GATGGTAAGTGGGTTTTGCA+GGG | - | chr2.2:5003236-5003255 | MS.gene052089:CDS | 45.0% |
| !! | GGAATATCTTGTCGGTTCCA+AGG | + | chr2.2:5001476-5001495 | None:intergenic | 45.0% |
| ACAAGAGGGAAGAGGTAGCA+AGG | - | chr2.2:5001984-5002003 | MS.gene052089:CDS | 50.0% | |
| AGGGTGCAGAAAGGGTTGAA+AGG | - | chr2.2:5003081-5003100 | MS.gene052089:CDS | 50.0% | |
| CAGGTCAGGAATAAGAGAGC+TGG | - | chr2.2:5003125-5003144 | MS.gene052089:CDS | 50.0% | |
| CCAGTTGTCATCGAGACACA+AGG | - | chr2.2:5001829-5001848 | MS.gene052089:CDS | 50.0% | |
| CCTTGTGTCTCGATGACAAC+TGG | + | chr2.2:5001832-5001851 | None:intergenic | 50.0% | |
| CGGTGCGCTATAACTTCCAT+TGG | + | chr2.2:5002913-5002932 | None:intergenic | 50.0% | |
| CTTTAGATCCTCCAGGCAGA+TGG | + | chr2.2:5002745-5002764 | None:intergenic | 50.0% | |
| GAAATGGGAAACCATCTGCC+TGG | - | chr2.2:5002731-5002750 | MS.gene052089:CDS | 50.0% | |
| GAGCTGGGTTCAAGCAAATC+AGG | - | chr2.2:5003141-5003160 | MS.gene052089:CDS | 50.0% | |
| GAGCTTGTGCCAGAAGAAGA+AGG | + | chr2.2:5001442-5001461 | None:intergenic | 50.0% | |
| GATAGTCTTCTGACGAGGCA+CGG | + | chr2.2:5002555-5002574 | None:intergenic | 50.0% | |
| GTGCTTCCTTAAACCGAGTC+AGG | + | chr2.2:5002941-5002960 | None:intergenic | 50.0% | |
| TGACATTCAGCCAGTGATGG+TGG | - | chr2.2:5001888-5001907 | MS.gene052089:CDS | 50.0% | |
| ! | AGCTTGTGAGGGTGCAGAAA+GGG | - | chr2.2:5003073-5003092 | MS.gene052089:CDS | 50.0% |
| ! | TAGCTTGTGAGGGTGCAGAA+AGG | - | chr2.2:5003072-5003091 | MS.gene052089:CDS | 50.0% |
| ! | TGGGTTTTGCAGGGATGGAA+GGG | - | chr2.2:5003245-5003264 | MS.gene052089:CDS | 50.0% |
| !! | CACTCTTCGTCTTTTGGGGA+TGG | - | chr2.2:5002282-5002301 | MS.gene052089:CDS | 50.0% |
| !! | GGATGGTAAGTGGGTTTTGC+AGG | - | chr2.2:5003235-5003254 | MS.gene052089:CDS | 50.0% |
| !! | GTAAGTGGGTTTTGCAGGGA+TGG | - | chr2.2:5003240-5003259 | MS.gene052089:CDS | 50.0% |
| AAAGGGTGGAGGAAACCGGA+CGG | - | chr2.2:5002649-5002668 | MS.gene052089:CDS | 55.0% | |
| ATGGGAAACCATCTGCCTGG+AGG | - | chr2.2:5002734-5002753 | MS.gene052089:CDS | 55.0% | |
| CCAGCAGTTGCCACATCAAG+AGG | + | chr2.2:5002381-5002400 | None:intergenic | 55.0% | |
| CCTCTTGATGTGGCAACTGC+TGG | - | chr2.2:5002378-5002397 | MS.gene052089:CDS | 55.0% | |
| CTGTGGCGAGCTACGATCAA+AGG | - | chr2.2:5002226-5002245 | MS.gene052089:CDS | 55.0% | |
| GCAGAAAGGGTGGAGGAAAC+CGG | - | chr2.2:5002645-5002664 | MS.gene052089:CDS | 55.0% | |
| GTTTCCTCCACCCTTTCTGC+AGG | + | chr2.2:5002645-5002664 | None:intergenic | 55.0% | |
| TACAAACAATGCCGCGGCTG+TGG | - | chr2.2:5002170-5002189 | MS.gene052089:CDS | 55.0% | |
| TAGACCTGCAGAAAGGGTGG+AGG | - | chr2.2:5002638-5002657 | MS.gene052089:CDS | 55.0% | |
| TGAGACCTACAAGCAGTGGC+AGG | - | chr2.2:5003106-5003125 | MS.gene052089:CDS | 55.0% | |
| TGCCACTGCTTGTAGGTCTC+AGG | + | chr2.2:5003107-5003126 | None:intergenic | 55.0% | |
| ! | GTGGGTTTTGCAGGGATGGA+AGG | - | chr2.2:5003244-5003263 | MS.gene052089:CDS | 55.0% |
| !! | GCGCACCGTTTTTCCTGACT+CGG | - | chr2.2:5002925-5002944 | MS.gene052089:CDS | 55.0% |
| !! | GTAGTTTGCTAGACGCCGTC+CGG | + | chr2.2:5002667-5002686 | None:intergenic | 55.0% |
| AATGGCAGCAGCTGCATCGC+TGG | - | chr2.2:5001697-5001716 | MS.gene052089:CDS | 60.0% | |
| ATGCCGCGGCTGTGGATTTG+TGG | - | chr2.2:5002178-5002197 | MS.gene052089:CDS | 60.0% | |
| CCTACAAGCAGTGGCAGGTC+AGG | - | chr2.2:5003111-5003130 | MS.gene052089:CDS | 60.0% | |
| CCTGACCTGCCACTGCTTGT+AGG | + | chr2.2:5003114-5003133 | None:intergenic | 60.0% | |
| GCAGGTCTAAATCCTGGCCG+AGG | + | chr2.2:5002627-5002646 | None:intergenic | 60.0% | |
| GGAATTGAGCTTCCTCGGCC+AGG | - | chr2.2:5002612-5002631 | MS.gene052089:CDS | 60.0% | |
| GGCCTGAGACCTACAAGCAG+TGG | - | chr2.2:5003102-5003121 | MS.gene052089:CDS | 60.0% | |
| GGTCCACAAATCCACAGCCG+CGG | + | chr2.2:5002184-5002203 | None:intergenic | 60.0% | |
| !! | CGAAGCTTTGGAGGACCACC+AGG | + | chr2.2:5002585-5002604 | None:intergenic | 60.0% |
| TTCTGACGAGGCACGGCCAC+TGG | + | chr2.2:5002548-5002567 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 5001343 | 5003307 | 5001343 | ID=MS.gene052089 |
| chr2.2 | mRNA | 5001343 | 5003307 | 5001343 | ID=MS.gene052089.t1;Parent=MS.gene052089 |
| chr2.2 | exon | 5001343 | 5003307 | 5001343 | ID=MS.gene052089.t1.exon1;Parent=MS.gene052089.t1 |
| chr2.2 | CDS | 5001343 | 5003307 | 5001343 | ID=cds.MS.gene052089.t1;Parent=MS.gene052089.t1 |
| Gene Sequence |
| Protein sequence |
