Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41490.t1 | XP_013460449.1 | 95.3 | 447 | 21 | 0 | 6 | 452 | 36 | 482 | 6.90E-247 | 862.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41490.t1 | Q6WG30 | 38.2 | 445 | 271 | 4 | 6 | 447 | 55 | 498 | 6.6e-89 | 329.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41490.t1 | A0A072UY40 | 95.3 | 447 | 21 | 0 | 6 | 452 | 36 | 482 | 5.0e-247 | 862.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene41490 | 0.888663 | 4.83E-73 | -1.69E-46 |
| MS.gene050096 | MS.gene41490 | 0.80459 | 2.01E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene41490 | 0.860654 | 1.78E-63 | -1.69E-46 |
| MS.gene052211 | MS.gene41490 | 0.826659 | 2.40E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene41490 | 0.875361 | 3.27E-68 | -1.69E-46 |
| MS.gene05244 | MS.gene41490 | 0.842857 | 2.00E-58 | -1.69E-46 |
| MS.gene052606 | MS.gene41490 | 0.809025 | 2.32E-50 | -1.69E-46 |
| MS.gene052702 | MS.gene41490 | 0.818177 | 2.25E-52 | -1.69E-46 |
| MS.gene052705 | MS.gene41490 | 0.815398 | 9.43E-52 | -1.69E-46 |
| MS.gene052706 | MS.gene41490 | 0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene41490 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene41490 | 0.812103 | 5.02E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene41490 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene053887 | MS.gene41490 | 0.836498 | 9.03E-57 | -1.69E-46 |
| MS.gene054146 | MS.gene41490 | 0.855859 | 4.75E-62 | -1.69E-46 |
| MS.gene054181 | MS.gene41490 | 0.821908 | 3.14E-53 | -1.69E-46 |
| MS.gene054277 | MS.gene41490 | 0.836515 | 8.95E-57 | -1.69E-46 |
| MS.gene054742 | MS.gene41490 | 0.851611 | 7.93E-61 | -1.69E-46 |
| MS.gene055154 | MS.gene41490 | 0.816052 | 6.74E-52 | -1.69E-46 |
| MS.gene055240 | MS.gene41490 | 0.828862 | 7.10E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene41490 | 0.807429 | 5.08E-50 | -1.69E-46 |
| MS.gene056359 | MS.gene41490 | 0.803326 | 3.68E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene41490 | 0.868237 | 7.58E-66 | -1.69E-46 |
| MS.gene056591 | MS.gene41490 | 0.867181 | 1.65E-65 | -1.69E-46 |
| MS.gene056697 | MS.gene41490 | 0.803503 | 3.38E-49 | -1.69E-46 |
| MS.gene056714 | MS.gene41490 | 0.814916 | 1.21E-51 | -1.69E-46 |
| MS.gene056748 | MS.gene41490 | 0.850197 | 1.98E-60 | -1.69E-46 |
| MS.gene056856 | MS.gene41490 | 0.817893 | 2.60E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene41490 | 0.838644 | 2.54E-57 | -1.69E-46 |
| MS.gene056922 | MS.gene41490 | 0.8035 | 3.38E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene41490 | 0.814969 | 1.18E-51 | -1.69E-46 |
| MS.gene057544 | MS.gene41490 | 0.837536 | 4.91E-57 | -1.69E-46 |
| MS.gene057550 | MS.gene41490 | 0.801824 | 7.50E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene41490 | 0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene058381 | MS.gene41490 | 0.813825 | 2.10E-51 | -1.69E-46 |
| MS.gene058450 | MS.gene41490 | 0.827701 | 1.35E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene41490 | 0.847185 | 1.36E-59 | -1.69E-46 |
| MS.gene059328 | MS.gene41490 | 0.804401 | 2.20E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene41490 | 0.806999 | 6.26E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene41490 | 0.859436 | 4.14E-63 | -1.69E-46 |
| MS.gene059955 | MS.gene41490 | 0.857005 | 2.19E-62 | -1.69E-46 |
| MS.gene060087 | MS.gene41490 | 0.832498 | 9.14E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41490.t1 | MTR_3g467140 | 95.302 | 447 | 21 | 0 | 6 | 452 | 36 | 482 | 0.0 | 890 |
| MS.gene41490.t1 | MTR_3g467130 | 81.839 | 446 | 81 | 0 | 6 | 451 | 36 | 481 | 0.0 | 781 |
| MS.gene41490.t1 | MTR_3g467140 | 94.842 | 349 | 18 | 0 | 104 | 452 | 1 | 349 | 0.0 | 697 |
| MS.gene41490.t1 | MTR_5g092150 | 41.761 | 443 | 254 | 4 | 6 | 447 | 32 | 471 | 4.84e-118 | 353 |
| MS.gene41490.t1 | MTR_5g091760 | 35.135 | 444 | 279 | 5 | 6 | 447 | 41 | 477 | 2.76e-100 | 308 |
| MS.gene41490.t1 | MTR_8g100135 | 36.036 | 444 | 279 | 5 | 6 | 447 | 37 | 477 | 7.05e-99 | 305 |
| MS.gene41490.t1 | MTR_5g025610 | 33.258 | 445 | 275 | 10 | 6 | 447 | 38 | 463 | 2.86e-72 | 235 |
| MS.gene41490.t1 | MTR_4g086130 | 31.350 | 437 | 287 | 5 | 6 | 441 | 38 | 462 | 2.57e-69 | 228 |
| MS.gene41490.t1 | MTR_8g072260 | 34.318 | 440 | 267 | 12 | 6 | 442 | 40 | 460 | 4.40e-68 | 224 |
| MS.gene41490.t1 | MTR_8g100135 | 34.971 | 346 | 222 | 3 | 6 | 349 | 37 | 381 | 5.31e-67 | 219 |
| MS.gene41490.t1 | MTR_5g025610 | 33.902 | 410 | 249 | 10 | 6 | 412 | 38 | 428 | 9.28e-67 | 220 |
| MS.gene41490.t1 | MTR_5g020020 | 30.088 | 452 | 302 | 6 | 6 | 452 | 39 | 481 | 1.74e-66 | 221 |
| MS.gene41490.t1 | MTR_1g037580 | 31.136 | 440 | 289 | 6 | 6 | 444 | 47 | 473 | 4.67e-65 | 217 |
| MS.gene41490.t1 | MTR_8g089190 | 29.596 | 446 | 295 | 9 | 6 | 442 | 4 | 439 | 5.15e-65 | 216 |
| MS.gene41490.t1 | MTR_1g019410 | 31.081 | 444 | 290 | 7 | 6 | 448 | 38 | 466 | 8.79e-65 | 216 |
| MS.gene41490.t1 | MTR_8g072260 | 34.878 | 410 | 245 | 12 | 6 | 412 | 40 | 430 | 4.47e-63 | 211 |
| MS.gene41490.t1 | MTR_4g086040 | 30.752 | 439 | 290 | 6 | 6 | 442 | 41 | 467 | 5.46e-63 | 211 |
| MS.gene41490.t1 | MTR_6g034940 | 30.752 | 452 | 298 | 7 | 1 | 445 | 36 | 479 | 1.00e-62 | 211 |
| MS.gene41490.t1 | MTR_8g077810 | 28.825 | 451 | 302 | 7 | 6 | 445 | 36 | 478 | 1.81e-61 | 208 |
| MS.gene41490.t1 | MTR_5g082520 | 28.540 | 459 | 296 | 9 | 6 | 449 | 31 | 472 | 1.27e-59 | 202 |
| MS.gene41490.t1 | MTR_8g016180 | 28.054 | 442 | 307 | 5 | 5 | 445 | 39 | 470 | 1.56e-59 | 202 |
| MS.gene41490.t1 | MTR_5g010750 | 27.045 | 440 | 314 | 4 | 6 | 444 | 34 | 467 | 1.39e-58 | 200 |
| MS.gene41490.t1 | MTR_5g010750 | 27.805 | 410 | 290 | 3 | 6 | 414 | 34 | 438 | 2.65e-58 | 198 |
| MS.gene41490.t1 | MTR_8g089800 | 29.571 | 443 | 292 | 11 | 6 | 437 | 46 | 479 | 9.91e-57 | 195 |
| MS.gene41490.t1 | MTR_2g031920 | 27.716 | 451 | 316 | 7 | 6 | 450 | 44 | 490 | 4.09e-56 | 193 |
| MS.gene41490.t1 | MTR_3g112120 | 29.545 | 440 | 284 | 9 | 6 | 433 | 44 | 469 | 3.71e-55 | 191 |
| MS.gene41490.t1 | MTR_5g014240 | 27.982 | 436 | 306 | 6 | 6 | 437 | 48 | 479 | 1.12e-54 | 189 |
| MS.gene41490.t1 | MTR_5g014250 | 27.752 | 436 | 306 | 7 | 6 | 436 | 48 | 479 | 1.61e-54 | 189 |
| MS.gene41490.t1 | MTR_5g021220 | 29.935 | 461 | 292 | 10 | 6 | 446 | 39 | 488 | 3.69e-53 | 186 |
| MS.gene41490.t1 | MTR_2g031930 | 27.816 | 435 | 305 | 6 | 6 | 436 | 48 | 477 | 4.69e-53 | 185 |
| MS.gene41490.t1 | MTR_5g025610 | 32.172 | 373 | 234 | 8 | 6 | 375 | 38 | 394 | 6.60e-53 | 183 |
| MS.gene41490.t1 | MTR_3g070380 | 27.974 | 454 | 298 | 9 | 6 | 447 | 32 | 468 | 9.59e-53 | 184 |
| MS.gene41490.t1 | MTR_7g033040 | 28.878 | 419 | 282 | 7 | 6 | 419 | 36 | 443 | 6.51e-52 | 182 |
| MS.gene41490.t1 | MTR_8g072260 | 34.048 | 373 | 227 | 11 | 6 | 375 | 40 | 396 | 6.61e-51 | 179 |
| MS.gene41490.t1 | MTR_4g005230 | 29.680 | 438 | 291 | 11 | 6 | 436 | 46 | 473 | 1.27e-50 | 179 |
| MS.gene41490.t1 | MTR_2g031930 | 27.778 | 414 | 290 | 6 | 6 | 415 | 44 | 452 | 4.41e-50 | 176 |
| MS.gene41490.t1 | MTR_8g076940 | 27.354 | 446 | 307 | 9 | 6 | 445 | 49 | 483 | 4.82e-50 | 177 |
| MS.gene41490.t1 | MTR_8g016180 | 28.191 | 376 | 263 | 3 | 5 | 379 | 39 | 408 | 5.12e-50 | 175 |
| MS.gene41490.t1 | MTR_1g032950 | 27.416 | 445 | 282 | 9 | 6 | 436 | 46 | 463 | 6.76e-49 | 174 |
| MS.gene41490.t1 | MTR_8g012970 | 30.159 | 441 | 287 | 10 | 6 | 437 | 48 | 476 | 3.72e-48 | 172 |
| MS.gene41490.t1 | MTR_8g076510 | 27.423 | 423 | 286 | 8 | 6 | 419 | 42 | 452 | 2.88e-46 | 167 |
| MS.gene41490.t1 | MTR_7g016040 | 26.941 | 438 | 298 | 11 | 6 | 441 | 36 | 453 | 4.28e-46 | 166 |
| MS.gene41490.t1 | MTR_3g007320 | 26.879 | 439 | 298 | 9 | 6 | 441 | 36 | 454 | 9.80e-46 | 165 |
| MS.gene41490.t1 | MTR_6g015910 | 27.088 | 443 | 292 | 11 | 6 | 441 | 36 | 454 | 3.35e-44 | 161 |
| MS.gene41490.t1 | MTR_5g020020 | 29.459 | 370 | 233 | 8 | 102 | 452 | 47 | 407 | 8.51e-43 | 156 |
| MS.gene41490.t1 | MTR_0045s0060 | 25.942 | 451 | 299 | 14 | 6 | 442 | 43 | 472 | 1.04e-40 | 152 |
| MS.gene41490.t1 | MTR_8g076940 | 27.344 | 384 | 266 | 7 | 6 | 384 | 49 | 424 | 2.19e-39 | 147 |
| MS.gene41490.t1 | MTR_0045s0070 | 25.442 | 452 | 300 | 13 | 6 | 442 | 43 | 472 | 2.08e-37 | 142 |
| MS.gene41490.t1 | MTR_0045s0060 | 25.000 | 408 | 281 | 11 | 42 | 442 | 1 | 390 | 5.21e-37 | 140 |
| MS.gene41490.t1 | MTR_8g089190 | 27.479 | 353 | 238 | 8 | 6 | 349 | 4 | 347 | 1.16e-36 | 138 |
| MS.gene41490.t1 | MTR_6g069000 | 26.190 | 420 | 285 | 9 | 6 | 414 | 53 | 458 | 7.39e-35 | 135 |
| MS.gene41490.t1 | MTR_6g069000 | 25.952 | 420 | 286 | 9 | 6 | 414 | 43 | 448 | 7.44e-35 | 135 |
| MS.gene41490.t1 | MTR_0045s0070 | 25.296 | 423 | 279 | 13 | 6 | 413 | 43 | 443 | 6.73e-33 | 129 |
| MS.gene41490.t1 | MTR_7g016040 | 27.003 | 337 | 230 | 9 | 6 | 340 | 36 | 358 | 1.31e-32 | 127 |
| MS.gene41490.t1 | MTR_0045s0080 | 24.607 | 382 | 254 | 11 | 5 | 374 | 42 | 401 | 1.44e-28 | 117 |
| MS.gene41490.t1 | MTR_1g032980 | 25.962 | 312 | 220 | 5 | 6 | 310 | 19 | 326 | 1.14e-26 | 111 |
| MS.gene41490.t1 | MTR_8g076940 | 25.641 | 351 | 248 | 7 | 6 | 351 | 49 | 391 | 2.66e-26 | 110 |
| MS.gene41490.t1 | MTR_8g076940 | 26.176 | 340 | 238 | 7 | 6 | 340 | 49 | 380 | 5.78e-26 | 109 |
| MS.gene41490.t1 | MTR_8g006450 | 25.238 | 420 | 268 | 16 | 9 | 405 | 44 | 440 | 1.37e-20 | 94.4 |
| MS.gene41490.t1 | MTR_3g051230 | 38.760 | 129 | 59 | 2 | 7 | 135 | 30 | 138 | 4.84e-20 | 87.4 |
| MS.gene41490.t1 | MTR_8g006495 | 28.185 | 259 | 161 | 9 | 163 | 405 | 78 | 327 | 2.18e-19 | 89.7 |
| MS.gene41490.t1 | MTR_6g022450 | 24.466 | 421 | 249 | 16 | 38 | 410 | 70 | 469 | 6.71e-19 | 89.4 |
| MS.gene41490.t1 | MTR_7g079440 | 23.583 | 441 | 285 | 15 | 10 | 414 | 189 | 613 | 1.26e-18 | 89.0 |
| MS.gene41490.t1 | MTR_4g029690 | 26.978 | 278 | 187 | 8 | 6 | 275 | 46 | 315 | 3.83e-18 | 85.5 |
| MS.gene41490.t1 | MTR_1g037560 | 23.716 | 409 | 269 | 14 | 80 | 449 | 141 | 545 | 6.31e-18 | 86.7 |
| MS.gene41490.t1 | MTR_2g019640 | 22.689 | 476 | 317 | 15 | 7 | 449 | 45 | 502 | 9.87e-18 | 85.9 |
| MS.gene41490.t1 | MTR_4g089055 | 23.058 | 412 | 287 | 12 | 32 | 419 | 76 | 481 | 2.10e-17 | 85.1 |
| MS.gene41490.t1 | MTR_4g089020 | 23.245 | 413 | 285 | 14 | 32 | 419 | 54 | 459 | 7.15e-17 | 83.2 |
| MS.gene41490.t1 | MTR_2g073420 | 28.280 | 343 | 202 | 11 | 118 | 433 | 162 | 487 | 1.16e-16 | 82.4 |
| MS.gene41490.t1 | MTR_1g037550 | 22.933 | 375 | 234 | 14 | 122 | 449 | 183 | 549 | 2.62e-16 | 81.6 |
| MS.gene41490.t1 | MTR_1g103670 | 24.270 | 445 | 288 | 14 | 6 | 419 | 37 | 463 | 5.10e-16 | 80.5 |
| MS.gene41490.t1 | MTR_8g012590 | 23.077 | 403 | 266 | 13 | 38 | 410 | 70 | 458 | 1.68e-15 | 79.0 |
| MS.gene41490.t1 | MTR_4g089030 | 28.019 | 207 | 140 | 4 | 218 | 419 | 281 | 483 | 2.28e-15 | 78.6 |
| MS.gene41490.t1 | MTR_3g076560 | 27.094 | 203 | 133 | 6 | 225 | 419 | 286 | 481 | 3.34e-15 | 78.2 |
| MS.gene41490.t1 | MTR_2g073440 | 23.844 | 411 | 282 | 11 | 39 | 433 | 64 | 459 | 6.00e-15 | 77.0 |
| MS.gene41490.t1 | MTR_2g073480 | 25.926 | 324 | 217 | 9 | 118 | 433 | 84 | 392 | 6.50e-15 | 76.6 |
| MS.gene41490.t1 | MTR_5g007450 | 24.324 | 444 | 298 | 15 | 6 | 426 | 45 | 473 | 1.80e-14 | 75.9 |
| MS.gene41490.t1 | MTR_0022s0290 | 28.713 | 202 | 135 | 4 | 224 | 420 | 286 | 483 | 2.14e-14 | 75.5 |
| MS.gene41490.t1 | MTR_5g007550 | 23.874 | 444 | 300 | 15 | 6 | 426 | 45 | 473 | 3.66e-14 | 74.7 |
| MS.gene41490.t1 | MTR_4g104610 | 27.322 | 183 | 126 | 3 | 240 | 419 | 289 | 467 | 3.83e-14 | 74.7 |
| MS.gene41490.t1 | MTR_4g089025 | 26.866 | 201 | 138 | 4 | 224 | 419 | 288 | 484 | 4.20e-14 | 74.7 |
| MS.gene41490.t1 | MTR_7g096340 | 25.065 | 383 | 223 | 17 | 71 | 402 | 85 | 454 | 6.03e-14 | 74.3 |
| MS.gene41490.t1 | MTR_4g104660 | 28.070 | 171 | 114 | 4 | 253 | 419 | 314 | 479 | 7.74e-14 | 73.9 |
| MS.gene41490.t1 | MTR_1750s0010 | 29.412 | 153 | 101 | 3 | 253 | 402 | 2 | 150 | 8.61e-14 | 69.3 |
| MS.gene41490.t1 | MTR_4g075110 | 25.359 | 209 | 143 | 6 | 207 | 402 | 295 | 503 | 1.13e-13 | 73.6 |
| MS.gene41490.t1 | MTR_4g062500 | 28.713 | 202 | 134 | 2 | 254 | 449 | 311 | 508 | 2.15e-13 | 72.4 |
| MS.gene41490.t1 | MTR_5g026520 | 22.667 | 450 | 300 | 18 | 11 | 420 | 37 | 478 | 2.24e-13 | 72.4 |
| MS.gene41490.t1 | MTR_1g031700 | 23.059 | 438 | 302 | 12 | 6 | 419 | 37 | 463 | 2.39e-13 | 72.4 |
| MS.gene41490.t1 | MTR_8g036185 | 28.372 | 215 | 130 | 5 | 222 | 419 | 277 | 484 | 2.41e-13 | 72.4 |
| MS.gene41490.t1 | MTR_7g006900 | 24.165 | 389 | 252 | 15 | 29 | 406 | 74 | 430 | 3.27e-13 | 71.6 |
| MS.gene41490.t1 | MTR_1g107295 | 25.829 | 422 | 244 | 16 | 69 | 449 | 117 | 510 | 3.43e-13 | 72.0 |
| MS.gene41490.t1 | MTR_7g055793 | 23.485 | 396 | 260 | 13 | 38 | 405 | 46 | 426 | 3.99e-13 | 71.6 |
| MS.gene41490.t1 | MTR_6g042610 | 23.459 | 503 | 295 | 20 | 9 | 447 | 40 | 516 | 5.65e-13 | 71.2 |
| MS.gene41490.t1 | MTR_4g012320 | 25.714 | 175 | 125 | 3 | 236 | 405 | 6 | 180 | 5.73e-13 | 68.6 |
| MS.gene41490.t1 | MTR_7g055793 | 23.485 | 396 | 260 | 13 | 38 | 405 | 101 | 481 | 6.00e-13 | 71.2 |
| MS.gene41490.t1 | MTR_3g058220 | 22.398 | 442 | 310 | 13 | 6 | 423 | 39 | 471 | 7.05e-13 | 70.9 |
| MS.gene41490.t1 | MTR_3g057910 | 22.410 | 415 | 284 | 15 | 38 | 423 | 68 | 473 | 7.60e-13 | 70.9 |
| MS.gene41490.t1 | MTR_2g105360 | 20.985 | 467 | 304 | 15 | 1 | 426 | 33 | 475 | 1.52e-12 | 69.7 |
| MS.gene41490.t1 | MTR_2g010380 | 23.278 | 421 | 277 | 19 | 37 | 419 | 66 | 478 | 1.55e-12 | 69.7 |
| MS.gene41490.t1 | MTR_2g055430 | 26.457 | 223 | 139 | 8 | 199 | 406 | 264 | 476 | 4.10e-12 | 68.6 |
| MS.gene41490.t1 | MTR_3g104560 | 26.667 | 240 | 148 | 10 | 186 | 411 | 138 | 363 | 4.41e-12 | 68.2 |
| MS.gene41490.t1 | MTR_3g057800 | 21.602 | 412 | 289 | 12 | 38 | 423 | 66 | 469 | 4.60e-12 | 68.2 |
| MS.gene41490.t1 | MTR_3g104560 | 26.667 | 240 | 148 | 10 | 186 | 411 | 273 | 498 | 5.45e-12 | 68.2 |
| MS.gene41490.t1 | MTR_5g016440 | 23.214 | 448 | 289 | 16 | 10 | 425 | 38 | 462 | 8.08e-12 | 67.4 |
| MS.gene41490.t1 | MTR_3g465300 | 24.167 | 240 | 164 | 7 | 193 | 420 | 257 | 490 | 1.07e-11 | 67.4 |
| MS.gene41490.t1 | MTR_4g078110 | 23.798 | 416 | 270 | 12 | 6 | 398 | 31 | 422 | 1.29e-11 | 66.6 |
| MS.gene41490.t1 | MTR_5g070010 | 21.854 | 302 | 212 | 9 | 127 | 405 | 165 | 465 | 1.34e-11 | 67.0 |
| MS.gene41490.t1 | MTR_4g062510 | 26.961 | 204 | 135 | 5 | 254 | 449 | 315 | 512 | 1.70e-11 | 66.6 |
| MS.gene41490.t1 | MTR_4g104550 | 23.039 | 408 | 281 | 15 | 38 | 419 | 58 | 458 | 1.87e-11 | 66.2 |
| MS.gene41490.t1 | MTR_7g056103 | 22.857 | 175 | 123 | 2 | 253 | 419 | 304 | 474 | 1.96e-11 | 66.2 |
| MS.gene41490.t1 | MTR_8g073960 | 27.232 | 224 | 148 | 6 | 206 | 420 | 275 | 492 | 2.51e-11 | 65.9 |
| MS.gene41490.t1 | MTR_7g103450 | 21.769 | 294 | 204 | 8 | 130 | 402 | 178 | 466 | 3.21e-11 | 65.9 |
| MS.gene41490.t1 | MTR_0171s0010 | 20.000 | 450 | 304 | 11 | 38 | 442 | 67 | 505 | 3.22e-11 | 65.9 |
| MS.gene41490.t1 | MTR_7g079440 | 22.418 | 397 | 260 | 14 | 10 | 374 | 189 | 569 | 3.60e-11 | 65.5 |
| MS.gene41490.t1 | MTR_4g054920 | 25.475 | 263 | 174 | 8 | 195 | 447 | 266 | 516 | 3.99e-11 | 65.5 |
| MS.gene41490.t1 | MTR_3g076550 | 26.291 | 213 | 132 | 5 | 207 | 416 | 257 | 447 | 4.34e-11 | 65.1 |
| MS.gene41490.t1 | MTR_8g020950 | 26.857 | 175 | 119 | 4 | 253 | 423 | 307 | 476 | 4.82e-11 | 65.1 |
| MS.gene41490.t1 | MTR_8g042020 | 24.651 | 215 | 145 | 6 | 207 | 410 | 277 | 485 | 5.48e-11 | 65.1 |
| MS.gene41490.t1 | MTR_6g008640 | 24.176 | 273 | 182 | 10 | 192 | 447 | 256 | 520 | 5.63e-11 | 65.1 |
| MS.gene41490.t1 | MTR_6g008600 | 25.463 | 216 | 145 | 5 | 242 | 447 | 315 | 524 | 6.70e-11 | 64.7 |
| MS.gene41490.t1 | MTR_4g071710 | 25.714 | 210 | 126 | 5 | 244 | 423 | 274 | 483 | 6.90e-11 | 64.7 |
| MS.gene41490.t1 | MTR_3g467200 | 23.938 | 259 | 156 | 9 | 193 | 427 | 260 | 501 | 7.13e-11 | 64.7 |
| MS.gene41490.t1 | MTR_8g020960 | 25.532 | 235 | 154 | 7 | 199 | 423 | 253 | 476 | 7.89e-11 | 64.3 |
| MS.gene41490.t1 | MTR_8g076290 | 25.114 | 219 | 145 | 3 | 195 | 398 | 236 | 450 | 8.05e-11 | 64.3 |
| MS.gene41490.t1 | MTR_7g098550 | 25.369 | 339 | 223 | 13 | 82 | 406 | 133 | 455 | 9.42e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41490.t1 | AT2G42850 | 33.483 | 445 | 288 | 5 | 6 | 449 | 48 | 485 | 4.07e-90 | 282 |
| MS.gene41490.t1 | AT5G36110 | 36.889 | 450 | 266 | 9 | 6 | 447 | 37 | 476 | 8.69e-88 | 276 |
| MS.gene41490.t1 | AT4G19230 | 34.091 | 440 | 270 | 8 | 6 | 444 | 39 | 459 | 1.30e-75 | 244 |
| MS.gene41490.t1 | AT5G45340 | 33.258 | 442 | 273 | 9 | 6 | 445 | 39 | 460 | 1.45e-74 | 241 |
| MS.gene41490.t1 | AT4G19230 | 33.407 | 452 | 276 | 9 | 6 | 451 | 39 | 471 | 1.51e-70 | 231 |
| MS.gene41490.t1 | AT5G45340 | 33.577 | 411 | 251 | 9 | 6 | 414 | 39 | 429 | 7.01e-68 | 223 |
| MS.gene41490.t1 | AT2G29090 | 30.269 | 446 | 290 | 6 | 6 | 446 | 52 | 481 | 1.05e-66 | 221 |
| MS.gene41490.t1 | AT2G29090 | 30.269 | 446 | 290 | 6 | 6 | 446 | 52 | 481 | 1.05e-66 | 221 |
| MS.gene41490.t1 | AT3G19270 | 30.631 | 444 | 288 | 8 | 6 | 445 | 37 | 464 | 3.46e-64 | 214 |
| MS.gene41490.t1 | AT1G12740 | 27.739 | 429 | 301 | 5 | 6 | 432 | 34 | 455 | 4.34e-60 | 204 |
| MS.gene41490.t1 | AT3G19270 | 30.751 | 413 | 266 | 8 | 6 | 414 | 37 | 433 | 6.67e-59 | 200 |
| MS.gene41490.t1 | AT1G12740 | 27.356 | 435 | 301 | 6 | 6 | 432 | 34 | 461 | 2.00e-57 | 197 |
| MS.gene41490.t1 | AT1G12740 | 27.126 | 435 | 302 | 6 | 6 | 432 | 34 | 461 | 3.24e-57 | 196 |
| MS.gene41490.t1 | AT3G13730 | 29.231 | 455 | 288 | 10 | 6 | 445 | 54 | 489 | 8.25e-57 | 195 |
| MS.gene41490.t1 | AT5G36110 | 35.043 | 351 | 213 | 6 | 6 | 349 | 37 | 379 | 3.61e-56 | 191 |
| MS.gene41490.t1 | AT1G05160 | 27.523 | 436 | 309 | 6 | 6 | 437 | 48 | 480 | 6.70e-56 | 193 |
| MS.gene41490.t1 | AT1G05160 | 27.523 | 436 | 309 | 6 | 6 | 437 | 48 | 480 | 6.70e-56 | 193 |
| MS.gene41490.t1 | AT2G32440 | 28.539 | 445 | 295 | 8 | 6 | 446 | 47 | 472 | 1.29e-55 | 192 |
| MS.gene41490.t1 | AT2G32440 | 28.539 | 445 | 295 | 8 | 6 | 446 | 47 | 472 | 1.29e-55 | 192 |
| MS.gene41490.t1 | AT3G50660 | 26.793 | 474 | 306 | 6 | 6 | 444 | 42 | 509 | 5.08e-55 | 191 |
| MS.gene41490.t1 | AT2G29090 | 28.967 | 397 | 265 | 5 | 55 | 446 | 2 | 386 | 6.91e-55 | 187 |
| MS.gene41490.t1 | AT4G36380 | 27.078 | 421 | 296 | 5 | 6 | 420 | 72 | 487 | 2.65e-54 | 189 |
| MS.gene41490.t1 | AT3G13730 | 29.245 | 424 | 268 | 9 | 6 | 414 | 54 | 460 | 7.36e-54 | 187 |
| MS.gene41490.t1 | AT2G42850 | 31.214 | 346 | 231 | 5 | 6 | 349 | 48 | 388 | 8.31e-53 | 182 |
| MS.gene41490.t1 | AT5G05690 | 27.578 | 446 | 291 | 8 | 6 | 436 | 34 | 462 | 5.91e-52 | 182 |
| MS.gene41490.t1 | AT5G14400 | 27.394 | 449 | 282 | 11 | 8 | 446 | 1 | 415 | 8.51e-52 | 180 |
| MS.gene41490.t1 | AT5G14400 | 27.990 | 418 | 258 | 10 | 8 | 415 | 1 | 385 | 7.84e-51 | 177 |
| MS.gene41490.t1 | AT1G19630 | 26.339 | 448 | 314 | 11 | 6 | 447 | 38 | 475 | 2.01e-50 | 178 |
| MS.gene41490.t1 | AT5G38970 | 28.027 | 446 | 298 | 10 | 6 | 446 | 37 | 464 | 1.45e-49 | 176 |
| MS.gene41490.t1 | AT1G19630 | 27.119 | 413 | 288 | 9 | 6 | 414 | 38 | 441 | 4.02e-49 | 174 |
| MS.gene41490.t1 | AT3G30180 | 26.949 | 449 | 301 | 10 | 6 | 449 | 37 | 463 | 2.84e-47 | 169 |
| MS.gene41490.t1 | AT3G50660 | 27.160 | 405 | 265 | 4 | 6 | 385 | 42 | 441 | 8.79e-46 | 165 |
| MS.gene41490.t1 | AT5G05690 | 27.297 | 381 | 250 | 6 | 6 | 376 | 34 | 397 | 7.49e-44 | 159 |
| MS.gene41490.t1 | AT5G38970 | 28.877 | 374 | 245 | 8 | 6 | 374 | 37 | 394 | 8.76e-43 | 156 |
| MS.gene41490.t1 | AT1G19630 | 26.835 | 395 | 278 | 9 | 6 | 396 | 38 | 425 | 1.69e-42 | 155 |
| MS.gene41490.t1 | AT1G12740 | 27.893 | 337 | 235 | 4 | 6 | 340 | 34 | 364 | 1.50e-41 | 151 |
| MS.gene41490.t1 | AT1G55940 | 27.626 | 438 | 300 | 12 | 6 | 433 | 48 | 478 | 1.90e-41 | 154 |
| MS.gene41490.t1 | AT3G44970 | 27.928 | 444 | 307 | 7 | 6 | 444 | 38 | 473 | 2.09e-41 | 154 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 38 | 473 | 3.28e-41 | 153 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 38 | 473 | 3.28e-41 | 153 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 38 | 473 | 3.28e-41 | 153 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 38 | 473 | 3.28e-41 | 153 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 38 | 473 | 3.28e-41 | 153 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 38 | 473 | 3.28e-41 | 153 |
| MS.gene41490.t1 | AT5G48000 | 27.373 | 453 | 298 | 12 | 6 | 444 | 79 | 514 | 5.69e-41 | 153 |
| MS.gene41490.t1 | AT5G36130 | 46.099 | 141 | 73 | 3 | 308 | 447 | 1 | 139 | 1.00e-40 | 142 |
| MS.gene41490.t1 | AT1G55940 | 27.685 | 419 | 287 | 11 | 6 | 414 | 48 | 460 | 1.69e-40 | 151 |
| MS.gene41490.t1 | AT5G14400 | 28.863 | 343 | 221 | 8 | 8 | 340 | 1 | 330 | 1.69e-40 | 148 |
| MS.gene41490.t1 | AT5G36140 | 32.394 | 284 | 179 | 6 | 6 | 284 | 36 | 311 | 2.40e-40 | 147 |
| MS.gene41490.t1 | AT1G73340 | 25.055 | 455 | 308 | 8 | 6 | 447 | 46 | 480 | 6.07e-39 | 147 |
| MS.gene41490.t1 | AT1G78490 | 26.256 | 438 | 300 | 11 | 6 | 433 | 38 | 462 | 8.96e-37 | 141 |
| MS.gene41490.t1 | AT1G65670 | 24.638 | 414 | 289 | 6 | 6 | 413 | 38 | 434 | 1.18e-36 | 140 |
| MS.gene41490.t1 | AT5G38970 | 26.854 | 391 | 268 | 9 | 61 | 446 | 6 | 383 | 1.97e-36 | 138 |
| MS.gene41490.t1 | AT5G38970 | 26.854 | 391 | 268 | 9 | 61 | 446 | 6 | 383 | 1.97e-36 | 138 |
| MS.gene41490.t1 | AT4G36380 | 25.882 | 340 | 242 | 4 | 6 | 340 | 72 | 406 | 1.20e-35 | 137 |
| MS.gene41490.t1 | AT5G14400 | 25.635 | 394 | 249 | 11 | 63 | 446 | 2 | 361 | 1.37e-34 | 132 |
| MS.gene41490.t1 | AT4G15300 | 24.771 | 436 | 303 | 10 | 6 | 433 | 28 | 446 | 3.98e-34 | 133 |
| MS.gene41490.t1 | AT4G15300 | 24.771 | 436 | 303 | 10 | 6 | 433 | 38 | 456 | 5.05e-34 | 133 |
| MS.gene41490.t1 | AT4G15393 | 23.953 | 430 | 309 | 11 | 6 | 431 | 38 | 453 | 6.21e-31 | 124 |
| MS.gene41490.t1 | AT4G15396 | 24.374 | 439 | 298 | 13 | 6 | 431 | 38 | 455 | 1.29e-29 | 120 |
| MS.gene41490.t1 | AT4G15396 | 24.286 | 420 | 286 | 11 | 6 | 412 | 38 | 438 | 2.35e-29 | 120 |
| MS.gene41490.t1 | AT5G05690 | 25.140 | 358 | 236 | 8 | 94 | 436 | 3 | 343 | 2.90e-28 | 115 |
| MS.gene41490.t1 | AT1G78490 | 26.053 | 380 | 259 | 10 | 6 | 375 | 38 | 405 | 3.45e-27 | 113 |
| MS.gene41490.t1 | AT4G15300 | 23.028 | 469 | 314 | 12 | 6 | 444 | 28 | 479 | 3.01e-25 | 108 |
| MS.gene41490.t1 | AT4G15396 | 23.690 | 439 | 280 | 14 | 6 | 431 | 38 | 434 | 4.11e-24 | 104 |
| MS.gene41490.t1 | AT2G29090 | 26.022 | 269 | 181 | 5 | 6 | 269 | 52 | 307 | 6.20e-23 | 99.8 |
| MS.gene41490.t1 | AT4G15310 | 21.591 | 440 | 323 | 11 | 6 | 437 | 39 | 464 | 6.72e-22 | 98.6 |
| MS.gene41490.t1 | AT4G15393 | 22.460 | 374 | 275 | 8 | 6 | 376 | 38 | 399 | 1.29e-21 | 96.7 |
| MS.gene41490.t1 | AT4G15396 | 23.560 | 382 | 261 | 11 | 6 | 375 | 38 | 400 | 2.85e-21 | 95.9 |
| MS.gene41490.t1 | AT2G28860 | 22.246 | 463 | 317 | 15 | 10 | 447 | 44 | 488 | 2.33e-20 | 94.0 |
| MS.gene41490.t1 | AT1G11680 | 23.373 | 415 | 278 | 12 | 11 | 405 | 48 | 442 | 1.02e-19 | 92.0 |
| MS.gene41490.t1 | AT3G30290 | 22.222 | 414 | 289 | 10 | 43 | 444 | 5 | 397 | 1.80e-19 | 90.5 |
| MS.gene41490.t1 | AT2G28850 | 21.814 | 463 | 319 | 14 | 10 | 447 | 44 | 488 | 2.45e-19 | 90.9 |
| MS.gene41490.t1 | AT1G31800 | 23.476 | 443 | 283 | 14 | 10 | 414 | 110 | 534 | 3.28e-17 | 84.7 |
| MS.gene41490.t1 | AT3G44970 | 25.868 | 317 | 227 | 4 | 6 | 319 | 38 | 349 | 4.51e-17 | 83.2 |
| MS.gene41490.t1 | AT2G26170 | 29.707 | 239 | 142 | 10 | 186 | 411 | 175 | 400 | 1.70e-16 | 81.6 |
| MS.gene41490.t1 | AT3G10570 | 23.251 | 443 | 275 | 14 | 30 | 428 | 68 | 489 | 4.05e-16 | 80.9 |
| MS.gene41490.t1 | AT2G26170 | 22.658 | 459 | 289 | 15 | 1 | 411 | 43 | 483 | 4.26e-16 | 80.9 |
| MS.gene41490.t1 | AT5G08250 | 22.316 | 354 | 245 | 10 | 79 | 402 | 77 | 430 | 8.03e-16 | 80.1 |
| MS.gene41490.t1 | AT5G08250 | 22.316 | 354 | 245 | 10 | 79 | 402 | 139 | 492 | 1.19e-15 | 79.7 |
| MS.gene41490.t1 | AT1G11600 | 23.690 | 439 | 266 | 16 | 6 | 396 | 38 | 455 | 2.43e-15 | 78.6 |
| MS.gene41490.t1 | AT5G04660 | 23.843 | 432 | 287 | 13 | 30 | 428 | 66 | 488 | 4.44e-15 | 77.8 |
| MS.gene41490.t1 | AT5G23190 | 24.887 | 221 | 153 | 6 | 207 | 414 | 286 | 506 | 4.68e-15 | 77.8 |
| MS.gene41490.t1 | AT5G24950 | 24.819 | 415 | 265 | 17 | 38 | 419 | 62 | 462 | 6.38e-15 | 77.4 |
| MS.gene41490.t1 | AT3G53130 | 25.118 | 211 | 139 | 6 | 226 | 429 | 321 | 519 | 2.14e-14 | 75.9 |
| MS.gene41490.t1 | AT4G37370 | 23.729 | 236 | 165 | 5 | 192 | 425 | 240 | 462 | 2.33e-14 | 75.5 |
| MS.gene41490.t1 | AT5G47990 | 22.947 | 414 | 280 | 15 | 37 | 419 | 72 | 477 | 3.41e-14 | 75.1 |
| MS.gene41490.t1 | AT1G13140 | 26.230 | 244 | 161 | 8 | 182 | 408 | 243 | 484 | 3.71e-14 | 75.1 |
| MS.gene41490.t1 | AT2G45580 | 25.312 | 320 | 202 | 11 | 117 | 411 | 1 | 308 | 4.97e-14 | 73.6 |
| MS.gene41490.t1 | AT5G58860 | 25.168 | 298 | 201 | 9 | 127 | 402 | 165 | 462 | 4.98e-14 | 74.3 |
| MS.gene41490.t1 | AT2G45550 | 23.664 | 393 | 258 | 14 | 39 | 398 | 69 | 452 | 7.95e-14 | 73.9 |
| MS.gene41490.t1 | AT1G13140 | 28.986 | 207 | 130 | 7 | 217 | 408 | 254 | 458 | 7.97e-14 | 73.9 |
| MS.gene41490.t1 | AT1G33720 | 22.705 | 414 | 278 | 13 | 39 | 419 | 69 | 473 | 1.08e-13 | 73.6 |
| MS.gene41490.t1 | AT4G37360 | 24.272 | 206 | 146 | 4 | 224 | 427 | 268 | 465 | 2.17e-13 | 72.4 |
| MS.gene41490.t1 | AT2G23180 | 21.691 | 272 | 186 | 9 | 199 | 450 | 251 | 515 | 4.42e-13 | 71.6 |
| MS.gene41490.t1 | AT1G13150 | 25.088 | 283 | 194 | 8 | 182 | 447 | 236 | 517 | 8.06e-13 | 70.9 |
| MS.gene41490.t1 | AT5G57220 | 24.883 | 213 | 149 | 5 | 223 | 432 | 262 | 466 | 8.23e-13 | 70.5 |
| MS.gene41490.t1 | AT2G44890 | 24.706 | 255 | 175 | 7 | 192 | 429 | 240 | 494 | 1.17e-12 | 70.1 |
| MS.gene41490.t1 | AT4G37340 | 24.790 | 238 | 165 | 6 | 192 | 427 | 240 | 465 | 1.22e-12 | 70.1 |
| MS.gene41490.t1 | AT2G22330 | 23.581 | 229 | 165 | 4 | 206 | 428 | 287 | 511 | 1.29e-12 | 70.1 |
| MS.gene41490.t1 | AT2G22330 | 24.091 | 220 | 157 | 4 | 206 | 419 | 310 | 525 | 1.37e-12 | 70.1 |
| MS.gene41490.t1 | AT4G15110 | 22.252 | 373 | 218 | 16 | 97 | 410 | 180 | 539 | 2.29e-12 | 69.3 |
| MS.gene41490.t1 | AT5G35715 | 21.760 | 409 | 273 | 13 | 51 | 423 | 9 | 406 | 3.46e-12 | 68.6 |
| MS.gene41490.t1 | AT5G63450 | 24.367 | 316 | 191 | 15 | 121 | 402 | 155 | 456 | 9.52e-12 | 67.4 |
| MS.gene41490.t1 | AT5G63450 | 24.367 | 316 | 191 | 15 | 121 | 402 | 213 | 514 | 1.19e-11 | 67.0 |
| MS.gene41490.t1 | AT3G20960 | 23.131 | 428 | 282 | 13 | 37 | 427 | 71 | 488 | 1.43e-11 | 67.0 |
| MS.gene41490.t1 | AT1G64940 | 23.832 | 428 | 276 | 16 | 40 | 427 | 68 | 485 | 1.79e-11 | 66.6 |
| MS.gene41490.t1 | AT1G16400 | 22.393 | 326 | 205 | 12 | 133 | 419 | 179 | 495 | 2.02e-11 | 66.2 |
| MS.gene41490.t1 | AT3G26280 | 22.667 | 450 | 299 | 18 | 6 | 420 | 35 | 470 | 2.24e-11 | 66.2 |
| MS.gene41490.t1 | AT3G26280 | 22.667 | 450 | 299 | 18 | 6 | 420 | 52 | 487 | 2.70e-11 | 65.9 |
| MS.gene41490.t1 | AT5G06905 | 26.022 | 269 | 157 | 11 | 190 | 428 | 230 | 486 | 2.80e-11 | 65.9 |
| MS.gene41490.t1 | AT2G26710 | 22.849 | 372 | 242 | 15 | 103 | 449 | 166 | 517 | 2.95e-11 | 65.9 |
| MS.gene41490.t1 | AT3G20120 | 20.048 | 419 | 288 | 12 | 37 | 420 | 71 | 477 | 3.05e-11 | 65.9 |
| MS.gene41490.t1 | AT3G14620 | 23.193 | 332 | 224 | 12 | 95 | 406 | 153 | 473 | 3.65e-11 | 65.5 |
| MS.gene41490.t1 | AT3G26270 | 23.026 | 456 | 299 | 18 | 6 | 426 | 35 | 473 | 4.64e-11 | 65.1 |
| MS.gene41490.t1 | AT3G20110 | 21.286 | 451 | 285 | 13 | 11 | 420 | 47 | 468 | 4.67e-11 | 65.1 |
| MS.gene41490.t1 | AT4G39480 | 20.863 | 278 | 193 | 10 | 192 | 448 | 243 | 514 | 4.68e-11 | 65.1 |
| MS.gene41490.t1 | AT4G13290 | 25.829 | 422 | 245 | 21 | 38 | 419 | 63 | 456 | 8.06e-11 | 64.3 |
Find 97 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCTTGTTTAGGTATAT+TGG | 0.193849 | 3.1:-51614805 | MS.gene41490:intron |
| TTTCTTGTCTTCTTGCAATA+AGG | 0.216651 | 3.1:-51615638 | MS.gene41490:CDS |
| TCCCCTACAGTGTTTATTAT+TGG | 0.217404 | 3.1:-51617250 | MS.gene41490:CDS |
| CTCCCTTGTTTGGTGGATTT+AGG | 0.221627 | 3.1:-51614968 | MS.gene41490:CDS |
| ATTTCCCTGGCACCTCATTT+TGG | 0.224462 | 3.1:-51615767 | MS.gene41490:CDS |
| TCTTTGGGGTATCCTATTAT+TGG | 0.246365 | 3.1:-51617379 | MS.gene41490:CDS |
| CAATTCTTGCTCTAGCCTTT+TGG | 0.256516 | 3.1:+51615739 | None:intergenic |
| AAATGTTCCAAAAGGGTCTT+TGG | 0.266253 | 3.1:-51617395 | MS.gene41490:intron |
| CAAACCCTAGCTGAACTTAT+AGG | 0.271100 | 3.1:-51617139 | MS.gene41490:CDS |
| CAAGGATATGACATCCAAAA+AGG | 0.281190 | 3.1:-51614921 | MS.gene41490:CDS |
| CAAGGAAACAAGTTTATTCT+TGG | 0.285786 | 3.1:-51617223 | MS.gene41490:CDS |
| GTTTCTTGTTTAGGTATATT+GGG | 0.287130 | 3.1:-51614804 | MS.gene41490:intron |
| TTCTTGTCTTCTTGCAATAA+GGG | 0.290028 | 3.1:-51615637 | MS.gene41490:CDS |
| TCAAGTGTTTCTCCAATAAT+AGG | 0.290870 | 3.1:+51617367 | None:intergenic |
| CTCTTATGAGCTTGATGATA+TGG | 0.317159 | 3.1:-51615530 | MS.gene41490:CDS |
| CATCTTGGTTTAATCATAAC+TGG | 0.323588 | 3.1:+51614515 | None:intergenic |
| GCCTTTACTTACCTTCCATT+TGG | 0.345517 | 3.1:-51614689 | MS.gene41490:CDS |
| CGAGATGGTTCAAACTTGTA+TGG | 0.363230 | 3.1:+51614740 | None:intergenic |
| GAAGAAACTGTCCTATGATA+TGG | 0.372769 | 3.1:-51615886 | MS.gene41490:CDS |
| AATGTTCCAAAAGGGTCTTT+GGG | 0.394589 | 3.1:-51617394 | MS.gene41490:intron |
| AGGATGATCCCTCCCTTGTT+TGG | 0.399326 | 3.1:-51614978 | MS.gene41490:CDS |
| ACTTACCTTCCATTTGGTGC+AGG | 0.402034 | 3.1:-51614683 | MS.gene41490:CDS |
| ATTCCTTTATGTAGAACAAA+TGG | 0.402914 | 3.1:-51615096 | MS.gene41490:intron |
| AAAATTGTGAATGGTAGTTA+AGG | 0.403773 | 3.1:+51614619 | None:intergenic |
| AGTTAACAGAATATTACTTA+AGG | 0.412817 | 3.1:-51615949 | MS.gene41490:CDS |
| GGTAGACCTAAGGAAGGATA+TGG | 0.415745 | 3.1:+51614536 | None:intergenic |
| GAAGAAAGGGTATCTAAATA+TGG | 0.423206 | 3.1:-51617301 | MS.gene41490:CDS |
| TTCCTATTATGAACAAAAGA+AGG | 0.431903 | 3.1:-51615704 | MS.gene41490:CDS |
| ATGATCCCTCCCTTGTTTGG+TGG | 0.435807 | 3.1:-51614975 | MS.gene41490:CDS |
| TAAGAAGACATATTACATCT+TGG | 0.437118 | 3.1:+51614500 | None:intergenic |
| GCATAGGAAATGAGTTTGCC+AGG | 0.442163 | 3.1:-51614649 | MS.gene41490:CDS |
| CCTACCATTCAAAAGATACT+TGG | 0.452384 | 3.1:-51617166 | MS.gene41490:CDS |
| TTATGAAGCCCTGCACCAAA+TGG | 0.466953 | 3.1:+51614674 | None:intergenic |
| CCTATGCCATATCCTTCCTT+AGG | 0.469443 | 3.1:-51614542 | MS.gene41490:CDS |
| GTCCAATAATAAACACTGTA+GGG | 0.471515 | 3.1:+51617248 | None:intergenic |
| TAAAGCACAAAGGCAAGATA+AGG | 0.473516 | 3.1:-51617338 | MS.gene41490:CDS |
| CTTACCTTCCATTTGGTGCA+GGG | 0.476598 | 3.1:-51614682 | MS.gene41490:CDS |
| AGAAGGGAGGATTTGTCAAA+AGG | 0.477197 | 3.1:-51615687 | MS.gene41490:CDS |
| AGGTAAGTAAAGGCTGGAAT+TGG | 0.487683 | 3.1:+51614698 | None:intergenic |
| GAGGTGCCAGGGAAATTGAT+TGG | 0.495782 | 3.1:+51615774 | None:intergenic |
| CCTCTCCAAAATGAGGTGCC+AGG | 0.496307 | 3.1:+51615762 | None:intergenic |
| GATCAGATGGCTCACGTGCT+AGG | 0.498867 | 3.1:-51618109 | None:intergenic |
| GCATATCATTAGTAGAGCTT+AGG | 0.499290 | 3.1:+51615661 | None:intergenic |
| TGACGAGTAATAGTTTCCTC+AGG | 0.503107 | 3.1:+51614566 | None:intergenic |
| AAAGCACAAAGGCAAGATAA+GGG | 0.503390 | 3.1:-51617337 | MS.gene41490:CDS |
| TTGATCCTATAAGTTCAGCT+AGG | 0.507385 | 3.1:+51617134 | None:intergenic |
| AGTAAAGGCTGGAATTGGCT+TGG | 0.512364 | 3.1:+51614703 | None:intergenic |
| AATGGAAGGTAAGTAAAGGC+TGG | 0.514164 | 3.1:+51614692 | None:intergenic |
| GCTCTGAGTGGATAGAAGAA+AGG | 0.519240 | 3.1:-51617315 | MS.gene41490:CDS |
| CTCTGAGTGGATAGAAGAAA+GGG | 0.520937 | 3.1:-51617314 | MS.gene41490:CDS |
| TTTCCTAAATCCACCAAACA+AGG | 0.523989 | 3.1:+51614965 | None:intergenic |
| TACATTGGAAGCCATATCAT+AGG | 0.524278 | 3.1:+51615875 | None:intergenic |
| CATCATCACAAAATTGTGAA+TGG | 0.527167 | 3.1:+51614610 | None:intergenic |
| TAGCTGAACTTATAGGATCA+AGG | 0.533992 | 3.1:-51617132 | MS.gene41490:intron |
| TCTCTTCCAATCAATTTCCC+TGG | 0.538523 | 3.1:-51615780 | MS.gene41490:CDS |
| TGTCCAATAATAAACACTGT+AGG | 0.541231 | 3.1:+51617247 | None:intergenic |
| GTGCAGGCACAGGTTAGTGA+AGG | 0.541453 | 3.1:-51616036 | MS.gene41490:intron |
| ATCTATGTCAAACAATACAT+TGG | 0.547338 | 3.1:+51615860 | None:intergenic |
| CTCTCCAAAATGAGGTGCCA+GGG | 0.550512 | 3.1:+51615763 | None:intergenic |
| GAAATGAAGAAAGGCTAACA+TGG | 0.551454 | 3.1:-51615052 | MS.gene41490:CDS |
| TGATCCTATAAGTTCAGCTA+GGG | 0.551541 | 3.1:+51617135 | None:intergenic |
| CACTGTAGGGGAACCCAGCA+AGG | 0.556256 | 3.1:+51617261 | None:intergenic |
| GAAGTTATCTAGAGATCAAG+AGG | 0.566790 | 3.1:-51615508 | MS.gene41490:CDS |
| AATCATAACTGGTAGACCTA+AGG | 0.568166 | 3.1:+51614526 | None:intergenic |
| TAGGTATATTGGGCATCAAG+TGG | 0.569167 | 3.1:-51614794 | MS.gene41490:CDS |
| CAGGCACAGGTTAGTGAAGG+GGG | 0.578610 | 3.1:-51616033 | MS.gene41490:CDS |
| AAAGGGAAGGAAATGAAGAA+AGG | 0.580570 | 3.1:-51615061 | MS.gene41490:CDS |
| ATAAAACAATTGAAGTTGTG+AGG | 0.580685 | 3.1:-51615914 | MS.gene41490:CDS |
| TCCTATTATGAACAAAAGAA+GGG | 0.587101 | 3.1:-51615703 | MS.gene41490:CDS |
| ACCAAATGGAAGGTAAGTAA+AGG | 0.588864 | 3.1:+51614688 | None:intergenic |
| CCTAAGGAAGGATATGGCAT+AGG | 0.589890 | 3.1:+51614542 | None:intergenic |
| GCAGGGCTTCATAATTGCAT+AGG | 0.597715 | 3.1:-51614665 | MS.gene41490:CDS |
| GAAGCCCTGCACCAAATGGA+AGG | 0.601532 | 3.1:+51614678 | None:intergenic |
| TAAATCCACCAAACAAGGGA+GGG | 0.610091 | 3.1:+51614970 | None:intergenic |
| CATAGGAAATGAGTTTGCCA+GGG | 0.611766 | 3.1:-51614648 | MS.gene41490:CDS |
| TGCAGGCACAGGTTAGTGAA+GGG | 0.612093 | 3.1:-51616035 | MS.gene41490:intron |
| CTTAAAGATACTAGCTACCA+AGG | 0.614804 | 3.1:-51614939 | MS.gene41490:CDS |
| ATGTTCCAAAAGGGTCTTTG+GGG | 0.618224 | 3.1:-51617393 | MS.gene41490:intron |
| TCCAATAATAAACACTGTAG+GGG | 0.619302 | 3.1:+51617249 | None:intergenic |
| GCAGGCACAGGTTAGTGAAG+GGG | 0.621107 | 3.1:-51616034 | MS.gene41490:intron |
| AAATGAAGAAAGGCTAACAT+GGG | 0.624787 | 3.1:-51615051 | MS.gene41490:CDS |
| GTAATTATGTCATCAGCTAG+AGG | 0.627210 | 3.1:+51615600 | None:intergenic |
| GTGTTTATTATTGGACAACA+AGG | 0.637606 | 3.1:-51617241 | MS.gene41490:CDS |
| TATTATGAACAAAAGAAGGG+AGG | 0.641657 | 3.1:-51615700 | MS.gene41490:CDS |
| AGCAGACAAAACATCATCTG+AGG | 0.643135 | 3.1:+51617198 | None:intergenic |
| GGTAGTTAAGGTCTCAACCC+TGG | 0.648936 | 3.1:+51614631 | None:intergenic |
| TACAAAAGATGAAATACACA+TGG | 0.649342 | 3.1:-51615022 | MS.gene41490:CDS |
| ATAACTGGTAGACCTAAGGA+AGG | 0.650245 | 3.1:+51614530 | None:intergenic |
| TTCCTAAATCCACCAAACAA+GGG | 0.651412 | 3.1:+51614966 | None:intergenic |
| CTAAATCCACCAAACAAGGG+AGG | 0.656656 | 3.1:+51614969 | None:intergenic |
| ATGGTCTCAATTGAATCCTG+AGG | 0.666094 | 3.1:-51614582 | MS.gene41490:CDS |
| TTGACATAGATGATCACACA+AGG | 0.668771 | 3.1:-51615848 | MS.gene41490:CDS |
| GGCAAGATAAGGGCTCTGAG+TGG | 0.693628 | 3.1:-51617327 | MS.gene41490:CDS |
| GAGTTGCTCAAGAATTGATG+AGG | 0.701801 | 3.1:-51614998 | MS.gene41490:CDS |
| AATGAAGAAAGGCTAACATG+GGG | 0.726923 | 3.1:-51615050 | MS.gene41490:CDS |
| TGTAGGGGAACCCAGCAAGG+AGG | 0.735918 | 3.1:+51617264 | None:intergenic |
| TGACATAGATGATCACACAA+GGG | 0.752127 | 3.1:-51615847 | MS.gene41490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATACAAAATTAAAACTA+TGG | + | chr3.1:51617726-51617745 | None:intergenic | 10.0% |
| !! | TTAATCTGATTTATTAAAAT+AGG | - | chr3.1:51614526-51614545 | MS.gene41490:CDS | 10.0% |
| !! | TTAATGAATAAATAATGTAT+CGG | - | chr3.1:51615755-51615774 | MS.gene41490:CDS | 10.0% |
| !!! | AAGAGAAATCATATTTTTAA+GGG | - | chr3.1:51615571-51615590 | MS.gene41490:CDS | 15.0% |
| !!! | AGTCTTATTATGTTTATTTT+TGG | - | chr3.1:51616544-51616563 | MS.gene41490:intron | 15.0% |
| !!! | CAAAATTTTGCATAATATAA+AGG | - | chr3.1:51616386-51616405 | MS.gene41490:intron | 15.0% |
| !!! | CTTTATATTATGCAAAATTT+TGG | + | chr3.1:51616388-51616407 | None:intergenic | 15.0% |
| !!! | TAAAAAATTATTTTGACAAG+AGG | + | chr3.1:51616324-51616343 | None:intergenic | 15.0% |
| !!! | TAAATTAGTCTGTTAAAAAT+AGG | + | chr3.1:51615954-51615973 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGATTCTTTTTTA+AGG | - | chr3.1:51615727-51615746 | MS.gene41490:CDS | 15.0% |
| !!! | TTAATTTGGATATAATCTTT+GGG | + | chr3.1:51614900-51614919 | None:intergenic | 15.0% |
| !!! | TTTAATTTGGATATAATCTT+TGG | + | chr3.1:51614901-51614920 | None:intergenic | 15.0% |
| !! | AAACAAAAAATGTTCCAAAA+GGG | - | chr3.1:51615200-51615219 | MS.gene41490:intron | 20.0% |
| !! | AGTTAACAGAATATTACTTA+AGG | - | chr3.1:51616653-51616672 | MS.gene41490:intron | 20.0% |
| !! | TAAAAACTATAACAAACGAA+TGG | + | chr3.1:51617259-51617278 | None:intergenic | 20.0% |
| !! | TATAATCTTGATTCAAACAA+TGG | - | chr3.1:51616453-51616472 | MS.gene41490:intron | 20.0% |
| !! | TCCATATTCCAAAAAAAAAA+GGG | - | chr3.1:51617178-51617197 | MS.gene41490:CDS | 20.0% |
| !! | TTCCATATTCCAAAAAAAAA+AGG | - | chr3.1:51617177-51617196 | MS.gene41490:CDS | 20.0% |
| !! | TTGAATCAAGATTATAATCA+AGG | + | chr3.1:51616449-51616468 | None:intergenic | 20.0% |
| !!! | AAATGGAAATTTTAAAGCAA+AGG | - | chr3.1:51617523-51617542 | MS.gene41490:intron | 20.0% |
| !!! | AATGGAAATTTTAAAGCAAA+GGG | - | chr3.1:51617524-51617543 | MS.gene41490:intron | 20.0% |
| !!! | ATCAGTGACATATATATTTT+TGG | - | chr3.1:51617754-51617773 | MS.gene41490:intron | 20.0% |
| !!! | CATAGTAGCATTTTTTAATT+TGG | + | chr3.1:51614914-51614933 | None:intergenic | 20.0% |
| !!! | GAAGAGAAATCATATTTTTA+AGG | - | chr3.1:51615570-51615589 | MS.gene41490:CDS | 20.0% |
| !!! | GATTTTTAAGCAATTTTACT+AGG | - | chr3.1:51614630-51614649 | MS.gene41490:CDS | 20.0% |
| !!! | TAAGAAAAGATTCATTTTTC+AGG | + | chr3.1:51615835-51615854 | None:intergenic | 20.0% |
| !!! | TATTTTTTATGTTCAAGCAA+TGG | + | chr3.1:51614818-51614837 | None:intergenic | 20.0% |
| !!! | TCAGTGACATATATATTTTT+GGG | - | chr3.1:51617755-51617774 | MS.gene41490:intron | 20.0% |
| !!! | TTTTTGAGAGAATTTTTTTG+AGG | + | chr3.1:51615177-51615196 | None:intergenic | 20.0% |
| ! | AAAATTGTGAATGGTAGTTA+AGG | + | chr3.1:51617986-51618005 | None:intergenic | 25.0% |
| ! | ACACTAAAAGAAATCACTTA+AGG | - | chr3.1:51617227-51617246 | MS.gene41490:CDS | 25.0% |
| ! | ACTTAAACCTTAAAATCTCT+AGG | + | chr3.1:51614720-51614739 | None:intergenic | 25.0% |
| ! | ATAAAACAATTGAAGTTGTG+AGG | - | chr3.1:51616688-51616707 | MS.gene41490:intron | 25.0% |
| ! | ATCTATGTCAAACAATACAT+TGG | + | chr3.1:51616745-51616764 | None:intergenic | 25.0% |
| ! | ATTAACCATTCACTTTAACA+CGG | + | chr3.1:51616211-51616230 | None:intergenic | 25.0% |
| ! | ATTCCTTTATGTAGAACAAA+TGG | - | chr3.1:51617506-51617525 | MS.gene41490:intron | 25.0% |
| ! | CAAACAAAAAATGTTCCAAA+AGG | - | chr3.1:51615199-51615218 | MS.gene41490:intron | 25.0% |
| ! | CAAATATACATGATATTCAC+CGG | + | chr3.1:51616163-51616182 | None:intergenic | 25.0% |
| ! | CTCTCAATGAATTAGATTAT+TGG | - | chr3.1:51614939-51614958 | MS.gene41490:CDS | 25.0% |
| ! | TAAGAAGACATATTACATCT+TGG | + | chr3.1:51618105-51618124 | None:intergenic | 25.0% |
| ! | TACAAAAGATGAAATACACA+TGG | - | chr3.1:51617580-51617599 | MS.gene41490:intron | 25.0% |
| ! | TATCTCTCTAAATAAAGAGT+AGG | + | chr3.1:51614779-51614798 | None:intergenic | 25.0% |
| ! | TCAAAACTATGTGAAAAAGA+TGG | - | chr3.1:51616623-51616642 | MS.gene41490:intron | 25.0% |
| ! | TCCTATTATGAACAAAAGAA+GGG | - | chr3.1:51616899-51616918 | MS.gene41490:intron | 25.0% |
| ! | TCTCTCATCTAATTTCTAAA+TGG | - | chr3.1:51615099-51615118 | MS.gene41490:intron | 25.0% |
| ! | TTCCTATTATGAACAAAAGA+AGG | - | chr3.1:51616898-51616917 | MS.gene41490:intron | 25.0% |
| ! | TTTCCATTTGTTCTACATAA+AGG | + | chr3.1:51617512-51617531 | None:intergenic | 25.0% |
| !! | AAAACTTTAAAGAGAGACTA+AGG | + | chr3.1:51617481-51617500 | None:intergenic | 25.0% |
| !! | AAACTTTAAAGAGAGACTAA+GGG | + | chr3.1:51617480-51617499 | None:intergenic | 25.0% |
| !! | ACTAGGATTTTGTCAATTTT+GGG | - | chr3.1:51614647-51614666 | MS.gene41490:CDS | 25.0% |
| !! | GAAAAATCCTAGAGATTTTA+AGG | - | chr3.1:51614710-51614729 | MS.gene41490:CDS | 25.0% |
| !! | GTTTCTTGTTTAGGTATATT+GGG | - | chr3.1:51617798-51617817 | MS.gene41490:intron | 25.0% |
| !! | TACTAGGATTTTGTCAATTT+TGG | - | chr3.1:51614646-51614665 | MS.gene41490:CDS | 25.0% |
| !! | TCAAGTGTTTTCTTTTGTAT+TGG | - | chr3.1:51615880-51615899 | MS.gene41490:CDS | 25.0% |
| !! | TTGATTTTCTTAAAGCACAA+AGG | - | chr3.1:51615254-51615273 | MS.gene41490:intron | 25.0% |
| !!! | AAACAAAGCCCTTTTTTTTT+TGG | + | chr3.1:51617189-51617208 | None:intergenic | 25.0% |
| !!! | AGAGATTTTAAGGTTTAAGT+CGG | - | chr3.1:51614720-51614739 | MS.gene41490:CDS | 25.0% |
| !!! | ATTATGTTTATTTTTGGTGC+AGG | - | chr3.1:51616550-51616569 | MS.gene41490:intron | 25.0% |
| !!! | GAGAATTTTCAAGTGTTTTT+TGG | - | chr3.1:51615669-51615688 | MS.gene41490:CDS | 25.0% |
| !!! | GTTTACAATCAAGTTTTAGA+AGG | - | chr3.1:51617116-51617135 | MS.gene41490:intron | 25.0% |
| !!! | TCTTTTTCACATAGTTTTGA+AGG | + | chr3.1:51616623-51616642 | None:intergenic | 25.0% |
| !!! | TGTTTTCTTTTGTATTGGTT+AGG | - | chr3.1:51615885-51615904 | MS.gene41490:CDS | 25.0% |
| AAATGAAGAAAGGCTAACAT+GGG | - | chr3.1:51617551-51617570 | MS.gene41490:intron | 30.0% | |
| AAATTTGACATCAGCTTAGA+TGG | + | chr3.1:51616287-51616306 | None:intergenic | 30.0% | |
| AAGGATATGACATCCAAAAA+GGG | - | chr3.1:51617682-51617701 | MS.gene41490:intron | 30.0% | |
| AATAAAAGCTATTGTGTCTG+TGG | + | chr3.1:51617388-51617407 | None:intergenic | 30.0% | |
| AGTGCACATAATACAATGAA+AGG | + | chr3.1:51615133-51615152 | None:intergenic | 30.0% | |
| ATATTACATTTGCAGCAGAA+TGG | + | chr3.1:51614845-51614864 | None:intergenic | 30.0% | |
| ATGAGAGACTTAAGATCATT+CGG | + | chr3.1:51615087-51615106 | None:intergenic | 30.0% | |
| CAAGGAAACAAGTTTATTCT+TGG | - | chr3.1:51615379-51615398 | MS.gene41490:intron | 30.0% | |
| CATCATCACAAAATTGTGAA+TGG | + | chr3.1:51617995-51618014 | None:intergenic | 30.0% | |
| CATCTTGGTTTAATCATAAC+TGG | + | chr3.1:51618090-51618109 | None:intergenic | 30.0% | |
| GGCTAACAATAATGTCAAAT+TGG | - | chr3.1:51617776-51617795 | MS.gene41490:intron | 30.0% | |
| GTAATGTAATGAAGAGACAT+TGG | + | chr3.1:51615007-51615026 | None:intergenic | 30.0% | |
| GTCCAATAATAAACACTGTA+GGG | + | chr3.1:51615357-51615376 | None:intergenic | 30.0% | |
| GTGTTTATTATTGGACAACA+AGG | - | chr3.1:51615361-51615380 | MS.gene41490:intron | 30.0% | |
| GTTATCACAATTCAAATTCG+TGG | + | chr3.1:51616265-51616284 | None:intergenic | 30.0% | |
| TATTATGAACAAAAGAAGGG+AGG | - | chr3.1:51616902-51616921 | MS.gene41490:intron | 30.0% | |
| TCAAGTGTTTCTCCAATAAT+AGG | + | chr3.1:51615238-51615257 | None:intergenic | 30.0% | |
| TCCAATAATAAACACTGTAG+GGG | + | chr3.1:51615356-51615375 | None:intergenic | 30.0% | |
| TGTCCAATAATAAACACTGT+AGG | + | chr3.1:51615358-51615377 | None:intergenic | 30.0% | |
| TTCTTGTCTTCTTGCAATAA+GGG | - | chr3.1:51616965-51616984 | MS.gene41490:intron | 30.0% | |
| TTTATGTTCAAGCAATGGTA+GGG | + | chr3.1:51614813-51614832 | None:intergenic | 30.0% | |
| TTTCTTGTCTTCTTGCAATA+AGG | - | chr3.1:51616964-51616983 | MS.gene41490:intron | 30.0% | |
| ! | AAGTATCTTTTGAATGGTAG+GGG | + | chr3.1:51615437-51615456 | None:intergenic | 30.0% |
| ! | ATAAATGATGCATTTGAGAC+CGG | + | chr3.1:51615804-51615823 | None:intergenic | 30.0% |
| ! | CAAGTATCTTTTGAATGGTA+GGG | + | chr3.1:51615438-51615457 | None:intergenic | 30.0% |
| ! | CTTTCCAAGTATCTTTTGAA+TGG | + | chr3.1:51615443-51615462 | None:intergenic | 30.0% |
| ! | GATTAGTTGATATACTCACT+CGG | - | chr3.1:51615695-51615714 | MS.gene41490:CDS | 30.0% |
| ! | GGTTTCTTGTTTAGGTATAT+TGG | - | chr3.1:51617797-51617816 | MS.gene41490:intron | 30.0% |
| ! | GTCAAATTGGTTTCTTGTTT+AGG | - | chr3.1:51617789-51617808 | MS.gene41490:intron | 30.0% |
| ! | TCCCTTCTTTTGTTCATAAT+AGG | + | chr3.1:51616903-51616922 | None:intergenic | 30.0% |
| ! | TGAAAAGTCCTTTGAAAAAC+CGG | + | chr3.1:51615632-51615651 | None:intergenic | 30.0% |
| ! | TTTGAAACTCAAATTGTTGC+CGG | - | chr3.1:51616141-51616160 | MS.gene41490:intron | 30.0% |
| ! | TTTTATGTTCAAGCAATGGT+AGG | + | chr3.1:51614814-51614833 | None:intergenic | 30.0% |
| !! | ATTTTGTGATGATGTGTGAA+TGG | - | chr3.1:51618001-51618020 | MS.gene41490:intron | 30.0% |
| !! | GAAGAAAGGGTATCTAAATA+TGG | - | chr3.1:51615301-51615320 | MS.gene41490:intron | 30.0% |
| !! | GTTTGATTTTCAAAACGAGA+TGG | + | chr3.1:51617880-51617899 | None:intergenic | 30.0% |
| !!! | GAAATTTTAAAGCAAAGGGA+AGG | - | chr3.1:51617528-51617547 | MS.gene41490:intron | 30.0% |
| !!! | GAGATTTTAAGGTTTAAGTC+GGG | - | chr3.1:51614721-51614740 | MS.gene41490:CDS | 30.0% |
| !!! | GCCCTTTTTTTTTTGGAATA+TGG | + | chr3.1:51617182-51617201 | None:intergenic | 30.0% |
| !!! | TCAATTTTGGGATTCTACTA+TGG | - | chr3.1:51614659-51614678 | MS.gene41490:CDS | 30.0% |
| AAAGCACAAAGGCAAGATAA+GGG | - | chr3.1:51615265-51615284 | MS.gene41490:intron | 35.0% | |
| AAAGGGAAGGAAATGAAGAA+AGG | - | chr3.1:51617541-51617560 | MS.gene41490:intron | 35.0% | |
| AAATGTTCCAAAAGGGTCTT+TGG | - | chr3.1:51615207-51615226 | MS.gene41490:intron | 35.0% | |
| AATCATAACTGGTAGACCTA+AGG | + | chr3.1:51618079-51618098 | None:intergenic | 35.0% | |
| AATGAAGAAAGGCTAACATG+GGG | - | chr3.1:51617552-51617571 | MS.gene41490:intron | 35.0% | |
| AATGTTCCAAAAGGGTCTTT+GGG | - | chr3.1:51615208-51615227 | MS.gene41490:intron | 35.0% | |
| ACATTGGAAAGAGAAGACAT+TGG | + | chr3.1:51614991-51615010 | None:intergenic | 35.0% | |
| ACCAAATGGAAGGTAAGTAA+AGG | + | chr3.1:51617917-51617936 | None:intergenic | 35.0% | |
| CAAAACCGTGTTAAAGTGAA+TGG | - | chr3.1:51616203-51616222 | MS.gene41490:intron | 35.0% | |
| CAAGGATATGACATCCAAAA+AGG | - | chr3.1:51617681-51617700 | MS.gene41490:intron | 35.0% | |
| CCTACCATTCAAAAGATACT+TGG | - | chr3.1:51615436-51615455 | MS.gene41490:intron | 35.0% | |
| CTTAAAGATACTAGCTACCA+AGG | - | chr3.1:51617663-51617682 | MS.gene41490:intron | 35.0% | |
| GAAATGAAGAAAGGCTAACA+TGG | - | chr3.1:51617550-51617569 | MS.gene41490:intron | 35.0% | |
| GAAGAAACTGTCCTATGATA+TGG | - | chr3.1:51616716-51616735 | MS.gene41490:intron | 35.0% | |
| GAAGTTATCTAGAGATCAAG+AGG | - | chr3.1:51617094-51617113 | MS.gene41490:intron | 35.0% | |
| GAGGAGATAGAGATCATATA+TGG | + | chr3.1:51615047-51615066 | None:intergenic | 35.0% | |
| GCATATCATTAGTAGAGCTT+AGG | + | chr3.1:51616944-51616963 | None:intergenic | 35.0% | |
| GGATATAATCTTTGGGTCTA+CGG | + | chr3.1:51614893-51614912 | None:intergenic | 35.0% | |
| GTAATTATGTCATCAGCTAG+AGG | + | chr3.1:51617005-51617024 | None:intergenic | 35.0% | |
| TAAAGCACAAAGGCAAGATA+AGG | - | chr3.1:51615264-51615283 | MS.gene41490:intron | 35.0% | |
| TACATTGGAAGCCATATCAT+AGG | + | chr3.1:51616730-51616749 | None:intergenic | 35.0% | |
| TAGCTGAACTTATAGGATCA+AGG | - | chr3.1:51615470-51615489 | MS.gene41490:intron | 35.0% | |
| TAGTAACGTTCGATATTGTC+TGG | + | chr3.1:51616100-51616119 | None:intergenic | 35.0% | |
| TCCCCTACAGTGTTTATTAT+TGG | - | chr3.1:51615352-51615371 | MS.gene41490:intron | 35.0% | |
| TGACATAGATGATCACACAA+GGG | - | chr3.1:51616755-51616774 | MS.gene41490:intron | 35.0% | |
| TGATCCTATAAGTTCAGCTA+GGG | + | chr3.1:51615470-51615489 | None:intergenic | 35.0% | |
| TTAAGGGAAATGCTTCTCTA+TGG | - | chr3.1:51615587-51615606 | MS.gene41490:CDS | 35.0% | |
| TTCCTAAATCCACCAAACAA+GGG | + | chr3.1:51617639-51617658 | None:intergenic | 35.0% | |
| TTCTTATATTCGAGACCGAA+GGG | - | chr3.1:51615849-51615868 | MS.gene41490:CDS | 35.0% | |
| TTGACATAGATGATCACACA+AGG | - | chr3.1:51616754-51616773 | MS.gene41490:intron | 35.0% | |
| TTGATCCTATAAGTTCAGCT+AGG | + | chr3.1:51615471-51615490 | None:intergenic | 35.0% | |
| TTTCCTAAATCCACCAAACA+AGG | + | chr3.1:51617640-51617659 | None:intergenic | 35.0% | |
| TTTCTTATATTCGAGACCGA+AGG | - | chr3.1:51615848-51615867 | MS.gene41490:CDS | 35.0% | |
| ! | AGTATCTTTTGAATGGTAGG+GGG | + | chr3.1:51615436-51615455 | None:intergenic | 35.0% |
| ! | ATTAGTTGATATACTCCCTC+CGG | - | chr3.1:51615782-51615801 | MS.gene41490:CDS | 35.0% |
| ! | CCAAGTATCTTTTGAATGGT+AGG | + | chr3.1:51615439-51615458 | None:intergenic | 35.0% |
| ! | CTCTTATGAGCTTGATGATA+TGG | - | chr3.1:51617072-51617091 | MS.gene41490:intron | 35.0% |
| ! | CTTTTTGGATGTCATATCCT+TGG | + | chr3.1:51617683-51617702 | None:intergenic | 35.0% |
| !! | TCTTTGGGGTATCCTATTAT+TGG | - | chr3.1:51615223-51615242 | MS.gene41490:intron | 35.0% |
| !!! | ACATAGTTTTGAAGGCATTC+AGG | + | chr3.1:51616615-51616634 | None:intergenic | 35.0% |
| AACAATGGCGCTGTGAAATA+AGG | - | chr3.1:51616468-51616487 | MS.gene41490:intron | 40.0% | |
| AATGGAAGGTAAGTAAAGGC+TGG | + | chr3.1:51617913-51617932 | None:intergenic | 40.0% | |
| AGAAGGGAGGATTTGTCAAA+AGG | - | chr3.1:51616915-51616934 | MS.gene41490:intron | 40.0% | |
| AGCAGACAAAACATCATCTG+AGG | + | chr3.1:51615407-51615426 | None:intergenic | 40.0% | |
| AGGTAAGTAAAGGCTGGAAT+TGG | + | chr3.1:51617907-51617926 | None:intergenic | 40.0% | |
| ATAACTGGTAGACCTAAGGA+AGG | + | chr3.1:51618075-51618094 | None:intergenic | 40.0% | |
| ATGGTCTCAATTGAATCCTG+AGG | - | chr3.1:51618020-51618039 | MS.gene41490:intron | 40.0% | |
| ATGTTCCAAAAGGGTCTTTG+GGG | - | chr3.1:51615209-51615228 | MS.gene41490:intron | 40.0% | |
| CAAACCCTAGCTGAACTTAT+AGG | - | chr3.1:51615463-51615482 | MS.gene41490:intron | 40.0% | |
| CATAGGAAATGAGTTTGCCA+GGG | - | chr3.1:51617954-51617973 | MS.gene41490:intron | 40.0% | |
| CGAGATGGTTCAAACTTGTA+TGG | + | chr3.1:51617865-51617884 | None:intergenic | 40.0% | |
| CTATGGATTTGAGTCGTTGA+AGG | - | chr3.1:51614676-51614695 | MS.gene41490:CDS | 40.0% | |
| CTCTGAGTGGATAGAAGAAA+GGG | - | chr3.1:51615288-51615307 | MS.gene41490:intron | 40.0% | |
| GAGTTGCTCAAGAATTGATG+AGG | - | chr3.1:51617604-51617623 | MS.gene41490:intron | 40.0% | |
| GATATGACATCCAAAAAGGG+TGG | - | chr3.1:51617685-51617704 | MS.gene41490:intron | 40.0% | |
| GCCTTTACTTACCTTCCATT+TGG | - | chr3.1:51617913-51617932 | MS.gene41490:intron | 40.0% | |
| GGAAAGAGAAGACATTGGTA+TGG | + | chr3.1:51614986-51615005 | None:intergenic | 40.0% | |
| GGTGTAGTACTAAACTCTTG+AGG | + | chr3.1:51615066-51615085 | None:intergenic | 40.0% | |
| TAAATCCACCAAACAAGGGA+GGG | + | chr3.1:51617635-51617654 | None:intergenic | 40.0% | |
| TAGGTATATTGGGCATCAAG+TGG | - | chr3.1:51617808-51617827 | MS.gene41490:intron | 40.0% | |
| TCTCTTCCAATCAATTTCCC+TGG | - | chr3.1:51616822-51616841 | MS.gene41490:intron | 40.0% | |
| TGACGAGTAATAGTTTCCTC+AGG | + | chr3.1:51618039-51618058 | None:intergenic | 40.0% | |
| ! | CACTTGATAACCAATCCCTT+CGG | + | chr3.1:51615867-51615886 | None:intergenic | 40.0% |
| ! | GTTTTCAAAACCTCCTTGCT+GGG | - | chr3.1:51615328-51615347 | MS.gene41490:intron | 40.0% |
| ! | TGTTTTCAAAACCTCCTTGC+TGG | - | chr3.1:51615327-51615346 | MS.gene41490:intron | 40.0% |
| !! | CAATTCTTGCTCTAGCCTTT+TGG | + | chr3.1:51616866-51616885 | None:intergenic | 40.0% |
| !!! | AGCAAGGAGGTTTTGAAAAC+AGG | + | chr3.1:51615328-51615347 | None:intergenic | 40.0% |
| !!! | TTTATTTTTGGTGCAGGCAC+AGG | - | chr3.1:51616556-51616575 | MS.gene41490:intron | 40.0% |
| AGTAAAGGCTGGAATTGGCT+TGG | + | chr3.1:51617902-51617921 | None:intergenic | 45.0% | |
| ATATTCGAGACCGAAGGGAT+TGG | - | chr3.1:51615854-51615873 | MS.gene41490:CDS | 45.0% | |
| ATGTTCAAGCAATGGTAGGG+TGG | + | chr3.1:51614810-51614829 | None:intergenic | 45.0% | |
| CCTAAGGAAGGATATGGCAT+AGG | + | chr3.1:51618063-51618082 | None:intergenic | 45.0% | |
| CCTATGCCATATCCTTCCTT+AGG | - | chr3.1:51618060-51618079 | MS.gene41490:intron | 45.0% | |
| CTAAATCCACCAAACAAGGG+AGG | + | chr3.1:51617636-51617655 | None:intergenic | 45.0% | |
| GCAGGGCTTCATAATTGCAT+AGG | - | chr3.1:51617937-51617956 | MS.gene41490:intron | 45.0% | |
| GCATAGGAAATGAGTTTGCC+AGG | - | chr3.1:51617953-51617972 | MS.gene41490:intron | 45.0% | |
| GGTAGACCTAAGGAAGGATA+TGG | + | chr3.1:51618069-51618088 | None:intergenic | 45.0% | |
| TGCTGCTACGACTTCATGTA+TGG | - | chr3.1:51614590-51614609 | MS.gene41490:CDS | 45.0% | |
| TGTTCAAGCAATGGTAGGGT+GGG | + | chr3.1:51614809-51614828 | None:intergenic | 45.0% | |
| TTATGAAGCCCTGCACCAAA+TGG | + | chr3.1:51617931-51617950 | None:intergenic | 45.0% | |
| ! | AATGATGCATTTGAGACCGG+AGG | + | chr3.1:51615801-51615820 | None:intergenic | 45.0% |
| ! | ATATCACCTGCCACCCTTTT+TGG | + | chr3.1:51617698-51617717 | None:intergenic | 45.0% |
| ! | ATGATGCATTTGAGACCGGA+GGG | + | chr3.1:51615800-51615819 | None:intergenic | 45.0% |
| ! | ATTTCCCTGGCACCTCATTT+TGG | - | chr3.1:51616835-51616854 | MS.gene41490:intron | 45.0% |
| ! | CCTTTGAAAAACCGGCTGAA+CGG | + | chr3.1:51615624-51615643 | None:intergenic | 45.0% |
| ! | CTTTTGGCCTCTCCAAAATG+AGG | + | chr3.1:51616850-51616869 | None:intergenic | 45.0% |
| ! | GCTCTGAGTGGATAGAAGAA+AGG | - | chr3.1:51615287-51615306 | MS.gene41490:intron | 45.0% |
| !! | ACTTACCTTCCATTTGGTGC+AGG | - | chr3.1:51617919-51617938 | MS.gene41490:intron | 45.0% |
| !! | CTCATTTTGGAGAGGCCAAA+AGG | - | chr3.1:51616848-51616867 | MS.gene41490:intron | 45.0% |
| !! | CTCCCTTGTTTGGTGGATTT+AGG | - | chr3.1:51617634-51617653 | MS.gene41490:intron | 45.0% |
| !! | CTTACCTTCCATTTGGTGCA+GGG | - | chr3.1:51617920-51617939 | MS.gene41490:intron | 45.0% |
| ACAGTGTGTAGAGCACAGCA+TGG | - | chr3.1:51615918-51615937 | MS.gene41490:CDS | 50.0% | |
| AGGATGATCCCTCCCTTGTT+TGG | - | chr3.1:51617624-51617643 | MS.gene41490:intron | 50.0% | |
| GGTAGTTAAGGTCTCAACCC+TGG | + | chr3.1:51617974-51617993 | None:intergenic | 50.0% | |
| TGACATCCAAAAAGGGTGGC+AGG | - | chr3.1:51617689-51617708 | MS.gene41490:intron | 50.0% | |
| TGCAGGCACAGGTTAGTGAA+GGG | - | chr3.1:51616567-51616586 | MS.gene41490:intron | 50.0% | |
| ! | ATGATCCCTCCCTTGTTTGG+TGG | - | chr3.1:51617627-51617646 | MS.gene41490:intron | 50.0% |
| ! | CTCTCCAAAATGAGGTGCCA+GGG | + | chr3.1:51616842-51616861 | None:intergenic | 50.0% |
| ! | GAGGTGCCAGGGAAATTGAT+TGG | + | chr3.1:51616831-51616850 | None:intergenic | 50.0% |
| ! | GGATACCCCAAAGACCCTTT+TGG | + | chr3.1:51615217-51615236 | None:intergenic | 50.0% |
| ! | TTTCATACGTGCCGTTCAGC+CGG | - | chr3.1:51615610-51615629 | MS.gene41490:CDS | 50.0% |
| !! | CCGTTCAGCCGGTTTTTCAA+AGG | - | chr3.1:51615621-51615640 | MS.gene41490:CDS | 50.0% |
| CAGGCACAGGTTAGTGAAGG+GGG | - | chr3.1:51616569-51616588 | MS.gene41490:intron | 55.0% | |
| GAAGCCCTGCACCAAATGGA+AGG | + | chr3.1:51617927-51617946 | None:intergenic | 55.0% | |
| GCAGGCACAGGTTAGTGAAG+GGG | - | chr3.1:51616568-51616587 | MS.gene41490:intron | 55.0% | |
| GTGCAGGCACAGGTTAGTGA+AGG | - | chr3.1:51616566-51616585 | MS.gene41490:intron | 55.0% | |
| ! | CCTCTCCAAAATGAGGTGCC+AGG | + | chr3.1:51616843-51616862 | None:intergenic | 55.0% |
| !! | CCTGGCACCTCATTTTGGAG+AGG | - | chr3.1:51616840-51616859 | MS.gene41490:intron | 55.0% |
| !! | GGCAAGATAAGGGCTCTGAG+TGG | - | chr3.1:51615275-51615294 | MS.gene41490:intron | 55.0% |
| CACTGTAGGGGAACCCAGCA+AGG | + | chr3.1:51615344-51615363 | None:intergenic | 60.0% | |
| TGTAGGGGAACCCAGCAAGG+AGG | + | chr3.1:51615341-51615360 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 51614499 | 51618125 | 51614499 | ID=MS.gene41490 |
| chr3.1 | mRNA | 51614499 | 51618125 | 51614499 | ID=MS.gene41490.t1;Parent=MS.gene41490 |
| chr3.1 | exon | 51618110 | 51618125 | 51618110 | ID=MS.gene41490.t1.exon1;Parent=MS.gene41490.t1 |
| chr3.1 | CDS | 51618110 | 51618125 | 51618110 | ID=cds.MS.gene41490.t1;Parent=MS.gene41490.t1 |
| chr3.1 | exon | 51617133 | 51617403 | 51617133 | ID=MS.gene41490.t1.exon2;Parent=MS.gene41490.t1 |
| chr3.1 | CDS | 51617133 | 51617403 | 51617133 | ID=cds.MS.gene41490.t1;Parent=MS.gene41490.t1 |
| chr3.1 | exon | 51615487 | 51616052 | 51615487 | ID=MS.gene41490.t1.exon3;Parent=MS.gene41490.t1 |
| chr3.1 | CDS | 51615487 | 51616052 | 51615487 | ID=cds.MS.gene41490.t1;Parent=MS.gene41490.t1 |
| chr3.1 | exon | 51614914 | 51615104 | 51614914 | ID=MS.gene41490.t1.exon4;Parent=MS.gene41490.t1 |
| chr3.1 | CDS | 51614914 | 51615104 | 51614914 | ID=cds.MS.gene41490.t1;Parent=MS.gene41490.t1 |
| chr3.1 | exon | 51614499 | 51614813 | 51614499 | ID=MS.gene41490.t1.exon5;Parent=MS.gene41490.t1 |
| chr3.1 | CDS | 51614499 | 51614813 | 51614499 | ID=cds.MS.gene41490.t1;Parent=MS.gene41490.t1 |
| Gene Sequence |
| Protein sequence |
