Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41990.t1 | GAU33596.1 | 36.7 | 207 | 110 | 8 | 4 | 192 | 3 | 206 | 1.30E-14 | 92 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41990.t1 | Q2QMX9 | 39.5 | 119 | 67 | 3 | 451 | 567 | 364 | 479 | 1.1e-09 | 67.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41990.t1 | A0A392RQ23 | 63.6 | 88 | 32 | 0 | 6 | 93 | 2 | 89 | 3.5e-17 | 100.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene41990 | 0.810626 | 1.05E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene41990 | 0.820592 | 6.32E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene41990 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene41990 | 0.803424 | 3.51E-49 | -1.69E-46 |
| MS.gene050073 | MS.gene41990 | 0.821215 | 4.55E-53 | -1.69E-46 |
| MS.gene050273 | MS.gene41990 | 0.822148 | 2.77E-53 | -1.69E-46 |
| MS.gene051181 | MS.gene41990 | 0.812311 | 4.52E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene41990 | 0.819472 | 1.14E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene41990 | 0.831722 | 1.42E-55 | -1.69E-46 |
| MS.gene051613 | MS.gene41990 | 0.80736 | 5.25E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene41990 | 0.83605 | 1.17E-56 | -1.69E-46 |
| MS.gene052239 | MS.gene41990 | -0.815746 | 7.89E-52 | -1.69E-46 |
| MS.gene052447 | MS.gene41990 | 0.841644 | 4.19E-58 | -1.69E-46 |
| MS.gene053082 | MS.gene41990 | 0.806353 | 8.57E-50 | -1.69E-46 |
| MS.gene05329 | MS.gene41990 | 0.828808 | 7.32E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene41990 | 0.834735 | 2.52E-56 | -1.69E-46 |
| MS.gene054651 | MS.gene41990 | 0.809479 | 1.85E-50 | -1.69E-46 |
| MS.gene055058 | MS.gene41990 | 0.808322 | 3.28E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene41990 | 0.806455 | 8.16E-50 | -1.69E-46 |
| MS.gene05531 | MS.gene41990 | 0.802713 | 4.92E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene41990 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene055952 | MS.gene41990 | 0.824075 | 9.82E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene41990 | 0.826354 | 2.84E-54 | -1.69E-46 |
| MS.gene056272 | MS.gene41990 | 0.812584 | 3.94E-51 | -1.69E-46 |
| MS.gene056539 | MS.gene41990 | 0.811711 | 6.11E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene41990 | 0.80873 | 2.68E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene41990 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene41990 | 0.805541 | 1.27E-49 | -1.69E-46 |
| MS.gene058294 | MS.gene41990 | 0.831517 | 1.60E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene41990 | 0.809222 | 2.11E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene41990 | 0.803021 | 4.25E-49 | -1.69E-46 |
| MS.gene059458 | MS.gene41990 | 0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene059460 | MS.gene41990 | 0.809094 | 2.24E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene41990 | 0.830544 | 2.77E-55 | -1.69E-46 |
| MS.gene060134 | MS.gene41990 | 0.814186 | 1.75E-51 | -1.69E-46 |
| MS.gene060918 | MS.gene41990 | 0.800473 | 1.42E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41990.t1 | MTR_3g103070 | 53.030 | 66 | 30 | 1 | 503 | 567 | 414 | 479 | 5.83e-12 | 70.1 |
| MS.gene41990.t1 | MTR_3g103070 | 53.030 | 66 | 30 | 1 | 503 | 567 | 238 | 303 | 7.29e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 159 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGACATGCAAATTGATATT+TGG | 0.161657 | 6.4:-17557009 | None:intergenic |
| GTCATCGTTGTTGCTAATTT+TGG | 0.185554 | 6.4:-17557045 | None:intergenic |
| ATATTTGGCTTCACAGCTTC+TGG | 0.262175 | 6.4:-17556994 | None:intergenic |
| ACAACCCAATCCGGTGGTTT+TGG | 0.274926 | 6.4:-17557177 | None:intergenic |
| GGATCGGATTGAGGCGAAAT+TGG | 0.312057 | 6.4:+17556618 | MS.gene41990:CDS |
| TCAATGTTGCATTGAGGCCT+TGG | 0.323854 | 6.4:-17556522 | None:intergenic |
| TAACCATAGTCTAGAGCAAT+AGG | 0.328546 | 6.4:-17557315 | None:intergenic |
| CACAAAAGGTGAACCTGATA+TGG | 0.334350 | 6.4:-17558232 | None:intergenic |
| TTCAAAGCACATTCATTAGA+AGG | 0.343034 | 6.4:-17558268 | None:intergenic |
| TCCTCCAAAACCACCGGATT+GGG | 0.349846 | 6.4:+17557173 | MS.gene41990:CDS |
| GATTCTGATGATGAACCTAT+TGG | 0.354171 | 6.4:+17561424 | MS.gene41990:CDS |
| TAGGACTCCTAATGCGAAAA+AGG | 0.354628 | 6.4:+17560642 | MS.gene41990:CDS |
| GTACTCCTTGTCGTTTATCT+TGG | 0.355371 | 6.4:+17557276 | MS.gene41990:CDS |
| GTTGACGATTGCTCATGTTT+TGG | 0.358744 | 6.4:+17556837 | MS.gene41990:CDS |
| AGCATCAATCACCTCTGATT+CGG | 0.360071 | 6.4:-17556803 | None:intergenic |
| AACCTCCAAGTATCATGTTA+TGG | 0.362929 | 6.4:+17558053 | MS.gene41990:CDS |
| TATCTTGGTGTTGGTTTGAA+TGG | 0.363206 | 6.4:+17557291 | MS.gene41990:CDS |
| ATGACTCTTAAATTTGTGAT+AGG | 0.365170 | 6.4:-17557524 | None:intergenic |
| GGATTTAATCTTCTCCCAAT+AGG | 0.371670 | 6.4:-17561439 | None:intergenic |
| CAAGTGGATTCCGCTTCTAA+TGG | 0.372457 | 6.4:+17556649 | MS.gene41990:CDS |
| GGCCCTATTGCTCTAGACTA+TGG | 0.374365 | 6.4:+17557312 | MS.gene41990:CDS |
| TACGGCACCTGAACCATATC+AGG | 0.378292 | 6.4:+17558219 | MS.gene41990:CDS |
| GGAATCGGAAGGAGCAGTTT+CGG | 0.383719 | 6.4:-17556752 | None:intergenic |
| GCATCAATCACCTCTGATTC+GGG | 0.386865 | 6.4:-17556802 | None:intergenic |
| CAAATGGGTAGTACTTAGTA+TGG | 0.389718 | 6.4:-17558473 | None:intergenic |
| TTATGAACTCTGATTTGTTC+CGG | 0.390894 | 6.4:-17556949 | None:intergenic |
| AGAGTATATTCTTCATTATG+AGG | 0.392883 | 6.4:+17558531 | MS.gene41990:CDS |
| AAGCTAATGCAAAGATCAAA+TGG | 0.393986 | 6.4:-17558489 | None:intergenic |
| ACCTCCAAGTATCATGTTAT+GGG | 0.398427 | 6.4:+17558054 | MS.gene41990:CDS |
| AATGTGAATCTCATCTTGAA+TGG | 0.405947 | 6.4:-17557127 | None:intergenic |
| CGCAACATTAGAGAGGGTTA+TGG | 0.407003 | 6.4:-17561020 | None:intergenic |
| TTAGAACATAACACAATTGT+TGG | 0.411819 | 6.4:+17557551 | MS.gene41990:CDS |
| GAGTGCCACTCCTATCTTTG+TGG | 0.414682 | 6.4:+17560588 | MS.gene41990:CDS |
| TGCAACATTGAAGAAGTTCA+TGG | 0.424015 | 6.4:+17556534 | MS.gene41990:CDS |
| ACAATTGTGTTATGTTCTAA+AGG | 0.430610 | 6.4:-17557548 | None:intergenic |
| AGGTGAACCTGATATGGTTC+AGG | 0.432047 | 6.4:-17558226 | None:intergenic |
| CATTTGGCTGCTTGTGAGAT+GGG | 0.434841 | 6.4:+17558418 | MS.gene41990:CDS |
| CACACAAGTAGTGAGAATAT+TGG | 0.437542 | 6.4:+17557617 | MS.gene41990:CDS |
| TACTCTATCAGCAAGCTTCA+AGG | 0.440478 | 6.4:+17557724 | MS.gene41990:CDS |
| GCCAAGGATGTCGTGACATC+CGG | 0.443905 | 6.4:-17561043 | None:intergenic |
| TTACAAGTGGCAAGTGGCAC+TGG | 0.446633 | 6.4:+17557809 | MS.gene41990:intron |
| TCATTTGGCTGCTTGTGAGA+TGG | 0.449014 | 6.4:+17558417 | MS.gene41990:CDS |
| GAACCTTCATATAGCACAAA+AGG | 0.453061 | 6.4:-17558246 | None:intergenic |
| GGAATGGGAACCACAAAGAT+AGG | 0.454488 | 6.4:-17560598 | None:intergenic |
| CTCTTGATAGGAACAGGAAT+GGG | 0.462763 | 6.4:-17560613 | None:intergenic |
| TTCTAGTAATGAAGAAAGTA+AGG | 0.465082 | 6.4:+17561339 | MS.gene41990:CDS |
| GATAAGATGGTTACTGATGA+AGG | 0.470146 | 6.4:+17561154 | MS.gene41990:CDS |
| CTCCTCCAAAACCACCGGAT+TGG | 0.470788 | 6.4:+17557172 | MS.gene41990:CDS |
| TATAGTACAACTACATAATA+CGG | 0.472344 | 6.4:+17558201 | MS.gene41990:CDS |
| CAGGTGCAATCAAGGCTCTA+AGG | 0.480825 | 6.4:+17557492 | MS.gene41990:intron |
| ATGGGATCCAGGTGCAATCA+AGG | 0.481368 | 6.4:+17557484 | MS.gene41990:intron |
| TGAAAGTTGAAGTAGTTGAT+TGG | 0.481394 | 6.4:+17558023 | MS.gene41990:CDS |
| AGTTTCGGATGATTCTGATT+CGG | 0.481416 | 6.4:-17556737 | None:intergenic |
| CTTGTCGTTTATCTTGGTGT+TGG | 0.482430 | 6.4:+17557282 | MS.gene41990:CDS |
| AAAATCATTCAACTCGGAAT+CGG | 0.483063 | 6.4:-17556767 | None:intergenic |
| GCTTCCTTCGCCGAAACTGA+TGG | 0.486889 | 6.4:+17556867 | MS.gene41990:CDS |
| ACAGTTGTATCCATCAGTTT+CGG | 0.487547 | 6.4:-17556877 | None:intergenic |
| GGCTGATCAAAGCATGTATG+AGG | 0.489383 | 6.4:+17561297 | MS.gene41990:CDS |
| TCACTGCATATAGGAGTGGC+AGG | 0.489538 | 6.4:-17558442 | None:intergenic |
| AATCCGATCCATACGCGAGA+TGG | 0.490533 | 6.4:-17556605 | None:intergenic |
| TCTCACAAGCAGCCAAATGA+TGG | 0.490591 | 6.4:-17558414 | None:intergenic |
| AACACAATTGTTGGTAGGAA+TGG | 0.493585 | 6.4:+17557560 | MS.gene41990:CDS |
| CACCATCATTATTTGCCATA+GGG | 0.496657 | 6.4:-17558150 | None:intergenic |
| AGCTGGACGACAACCCAATC+CGG | 0.498647 | 6.4:-17557186 | None:intergenic |
| CATTAACCTTGCACGTAACC+AGG | 0.498782 | 6.4:+17558095 | MS.gene41990:CDS |
| TCAAGTGTATGAAGTTGTAT+TGG | 0.500168 | 6.4:+17557898 | MS.gene41990:CDS |
| AAAGAAAATCATCGGTTGGA+TGG | 0.500243 | 6.4:-17556921 | None:intergenic |
| CCTCTTGATAGGAACAGGAA+TGG | 0.500246 | 6.4:-17560614 | None:intergenic |
| CTCAGCTTCCATCTCGCGTA+TGG | 0.502896 | 6.4:+17556597 | MS.gene41990:CDS |
| TGGATGGGTGACAGAGTCTT+CGG | 0.504395 | 6.4:-17556905 | None:intergenic |
| ATGTGAATCTCATCTTGAAT+GGG | 0.505453 | 6.4:-17557126 | None:intergenic |
| ACTTCAACTTTCACAATGTG+TGG | 0.506598 | 6.4:-17558013 | None:intergenic |
| AACCCTCTCTAATGTTGCGC+CGG | 0.507470 | 6.4:+17561024 | MS.gene41990:CDS |
| TAAATGAGAATTATCTCGTA+TGG | 0.507781 | 6.4:-17561089 | None:intergenic |
| TATATATTCTAACTCAAGAA+AGG | 0.508168 | 6.4:-17558182 | None:intergenic |
| GCAGATATGTCACTGCATAT+AGG | 0.508179 | 6.4:-17558451 | None:intergenic |
| TGATGAATTTGACAAGGAAA+AGG | 0.508408 | 6.4:+17561276 | MS.gene41990:CDS |
| TGAAGGTCTATCTGTGGCTA+TGG | 0.508611 | 6.4:+17558339 | MS.gene41990:CDS |
| ATTCTGATGATGAACCTATT+GGG | 0.509439 | 6.4:+17561425 | MS.gene41990:CDS |
| CACCCTATGGCAAATAATGA+TGG | 0.509834 | 6.4:+17558148 | MS.gene41990:CDS |
| AAGCAGTTACTGAGCAAGGC+AGG | 0.511964 | 6.4:-17558571 | None:intergenic |
| AAGAAAATCATCGGTTGGAT+GGG | 0.512107 | 6.4:-17556920 | None:intergenic |
| ATTTCTGTGAGCATTTGAAA+TGG | 0.514591 | 6.4:-17556709 | None:intergenic |
| TGAATCTGCTGGTGTTGATA+AGG | 0.514836 | 6.4:+17561366 | MS.gene41990:CDS |
| ATATCCCATAACATGATACT+TGG | 0.516098 | 6.4:-17558058 | None:intergenic |
| TGATCCATTGTTTGAAGTGG+TGG | 0.523035 | 6.4:+17557937 | MS.gene41990:CDS |
| TCACCATCATTATTTGCCAT+AGG | 0.525350 | 6.4:-17558151 | None:intergenic |
| AAGTAGTGGTTCAGAAAGTG+AGG | 0.528285 | 6.4:+17561234 | MS.gene41990:CDS |
| CTTCCATCTCGCGTATGGAT+CGG | 0.528800 | 6.4:+17556602 | MS.gene41990:CDS |
| TGTTGCATTGAGGCCTTGGA+TGG | 0.529679 | 6.4:-17556518 | None:intergenic |
| ATCTTTGCATTAGCTTGCGA+GGG | 0.530721 | 6.4:+17558496 | MS.gene41990:CDS |
| TTTGCATTAGCTTGCGAGGG+TGG | 0.531565 | 6.4:+17558499 | MS.gene41990:CDS |
| CAAATCAGAGTTCATAATGT+TGG | 0.531597 | 6.4:+17556955 | MS.gene41990:CDS |
| TTGCATTAGCTTGCGAGGGT+GGG | 0.534470 | 6.4:+17558500 | MS.gene41990:CDS |
| GCCGGATGTCACGACATCCT+TGG | 0.534648 | 6.4:+17561042 | MS.gene41990:CDS |
| AACCATAGTCTAGAGCAATA+GGG | 0.535887 | 6.4:-17557314 | None:intergenic |
| CAAGAAGTTTCTGATAATGA+AGG | 0.536199 | 6.4:+17561184 | MS.gene41990:CDS |
| CCATTCCTGTTCCTATCAAG+AGG | 0.538225 | 6.4:+17560614 | MS.gene41990:CDS |
| AACATAACACAATTGTTGGT+AGG | 0.539968 | 6.4:+17557555 | MS.gene41990:CDS |
| AATCTCATCTTGAATGGGAA+GGG | 0.540062 | 6.4:-17557121 | None:intergenic |
| AGTAAGGATAATGAATCTGC+TGG | 0.540435 | 6.4:+17561355 | MS.gene41990:CDS |
| GAGTTGGAGGCAGCCATCCA+AGG | 0.548742 | 6.4:+17556505 | MS.gene41990:CDS |
| GTGGATTCCGCTTCTAATGG+TGG | 0.549941 | 6.4:+17556652 | MS.gene41990:CDS |
| ATTAAAGAAAAGGAAAGAGA+AGG | 0.550392 | 6.4:+17561477 | MS.gene41990:CDS |
| GAGTATATTCTTCATTATGA+GGG | 0.553560 | 6.4:+17558532 | MS.gene41990:CDS |
| GTATCCATCAGTTTCGGCGA+AGG | 0.555109 | 6.4:-17556871 | None:intergenic |
| TCCCATAACATGATACTTGG+AGG | 0.556144 | 6.4:-17558055 | None:intergenic |
| GAACTCTGATTTGTTCCGGA+AGG | 0.556980 | 6.4:-17556945 | None:intergenic |
| TGATATATCTATGAACGAGT+TGG | 0.557788 | 6.4:+17556489 | MS.gene41990:CDS |
| TTCCTATCAAGAGGAAAACT+AGG | 0.558813 | 6.4:+17560623 | MS.gene41990:CDS |
| CTCGCGTATGGATCGGATTG+AGG | 0.559761 | 6.4:+17556609 | MS.gene41990:CDS |
| TAGTGAGAATATTGGCTACC+TGG | 0.560068 | 6.4:+17557625 | MS.gene41990:CDS |
| AGCTAATGCAAAGATCAAAT+GGG | 0.560415 | 6.4:-17558488 | None:intergenic |
| CTTCAACTTTCACAATGTGT+GGG | 0.562177 | 6.4:-17558012 | None:intergenic |
| TATATCTATGAACGAGTTGG+AGG | 0.563699 | 6.4:+17556492 | MS.gene41990:CDS |
| TCCACCTCCTCCAAAACCAC+CGG | 0.567519 | 6.4:+17557167 | MS.gene41990:CDS |
| AGGAAAAGAAAATCATCGGT+TGG | 0.568688 | 6.4:-17556925 | None:intergenic |
| ACTTCTTCAATGTTGCATTG+AGG | 0.568719 | 6.4:-17556528 | None:intergenic |
| TATCATCCTGGTTACGTGCA+AGG | 0.571861 | 6.4:-17558101 | None:intergenic |
| CAGGTATTGTCGTATCATCC+TGG | 0.571974 | 6.4:-17558113 | None:intergenic |
| GAAATTGGTTGCACTTCAAG+TGG | 0.573643 | 6.4:+17556633 | MS.gene41990:CDS |
| ATCTCATCTTGAATGGGAAG+GGG | 0.575555 | 6.4:-17557120 | None:intergenic |
| GATCTTTGCATTAGCTTGCG+AGG | 0.578187 | 6.4:+17558495 | MS.gene41990:CDS |
| AATTGATCCATTGTTTGAAG+TGG | 0.578634 | 6.4:+17557934 | MS.gene41990:CDS |
| CGGAAGGAAAAGAAAATCAT+CGG | 0.583734 | 6.4:-17556929 | None:intergenic |
| GCTGGAGCTAGCTCACCCTA+TGG | 0.589695 | 6.4:+17558135 | MS.gene41990:CDS |
| TAGGGTGAGCTAGCTCCAGC+AGG | 0.589748 | 6.4:-17558132 | None:intergenic |
| GATGATACGACAATACCTGC+TGG | 0.590548 | 6.4:+17558117 | MS.gene41990:CDS |
| TGTTTCAAAGCCCGAATCAG+AGG | 0.590606 | 6.4:+17556792 | MS.gene41990:CDS |
| TATTCTTGAAGGTCTATCTG+TGG | 0.596214 | 6.4:+17558333 | MS.gene41990:CDS |
| GACAAAGCAGTTACTGAGCA+AGG | 0.596731 | 6.4:-17558575 | None:intergenic |
| TAACATGAATAACCACATCA+AGG | 0.604610 | 6.4:-17557973 | None:intergenic |
| CAATATTCTCACTACTTGTG+TGG | 0.610281 | 6.4:-17557616 | None:intergenic |
| GAAGGTGAAAAGATTGCGTA+TGG | 0.610532 | 6.4:+17561202 | MS.gene41990:CDS |
| TCATTCAACTCGGAATCGGA+AGG | 0.611313 | 6.4:-17556763 | None:intergenic |
| GCACTCGTTACAACTTCAGA+AGG | 0.620692 | 6.4:-17560571 | None:intergenic |
| GAATCTCATCTTGAATGGGA+AGG | 0.624887 | 6.4:-17557122 | None:intergenic |
| GATCCATTGTTTGAAGTGGT+GGG | 0.627574 | 6.4:+17557938 | MS.gene41990:CDS |
| GAATGTGCTTTGAATCTAGT+GGG | 0.628006 | 6.4:+17558277 | MS.gene41990:CDS |
| GTGCCCACCACTTCAAACAA+TGG | 0.628613 | 6.4:-17557941 | None:intergenic |
| TTATGGGATATCACTTTGAG+TGG | 0.630466 | 6.4:+17558070 | MS.gene41990:CDS |
| ATGAGCATCAGTTTGAGCCA+AGG | 0.631021 | 6.4:-17561059 | None:intergenic |
| TTGTTGTTACAAGTGGCAAG+TGG | 0.635244 | 6.4:+17557803 | MS.gene41990:intron |
| TGAATGTGCTTTGAATCTAG+TGG | 0.639135 | 6.4:+17558276 | MS.gene41990:CDS |
| AACAGTAAAATCATTCAACT+CGG | 0.640956 | 6.4:-17556773 | None:intergenic |
| CATCCGGCGCAACATTAGAG+AGG | 0.643432 | 6.4:-17561027 | None:intergenic |
| GTTCAAACCACCATTAGAAG+CGG | 0.645663 | 6.4:-17556659 | None:intergenic |
| GTCATCATACTTACACGAGA+AGG | 0.649490 | 6.4:-17560670 | None:intergenic |
| ATCCGGCGCAACATTAGAGA+GGG | 0.649921 | 6.4:-17561026 | None:intergenic |
| TATGAGGAAGAAGAGAATGC+TGG | 0.658314 | 6.4:+17561313 | MS.gene41990:CDS |
| CACTGCATATAGGAGTGGCA+GGG | 0.662718 | 6.4:-17558441 | None:intergenic |
| TATGTCACTGCATATAGGAG+TGG | 0.669880 | 6.4:-17558446 | None:intergenic |
| TATGGTGATGATAAAAGTAG+TGG | 0.670885 | 6.4:+17561220 | MS.gene41990:CDS |
| CACTATGATATACCTTGATG+TGG | 0.671736 | 6.4:+17557961 | MS.gene41990:CDS |
| CAACACCAAGATAAACGACA+AGG | 0.678389 | 6.4:-17557281 | None:intergenic |
| GAGGAAGAAGAGAATGCTGG+TGG | 0.690515 | 6.4:+17561316 | MS.gene41990:CDS |
| GTCTAGTGATGAATTTGACA+AGG | 0.690819 | 6.4:+17561270 | MS.gene41990:CDS |
| TGGACGACAACCCAATCCGG+TGG | 0.698402 | 6.4:-17557183 | None:intergenic |
| GGGAACCACAAAGATAGGAG+TGG | 0.699557 | 6.4:-17560593 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTATTAAAATGAA+AGG | - | chr6.4:17559059-17559078 | None:intergenic | 10.0% |
| !! | ATTATTCATATTTCTTAAAT+AGG | - | chr6.4:17559409-17559428 | None:intergenic | 10.0% |
| !!! | AAATTGATAATGGAATAAAA+TGG | - | chr6.4:17559090-17559109 | None:intergenic | 15.0% |
| !!! | CATTTTTCTTAAAAAATATG+AGG | + | chr6.4:17558374-17558393 | MS.gene41990:CDS | 15.0% |
| !!! | TATTTTTTAAGAAAAATGCA+AGG | - | chr6.4:17558372-17558391 | None:intergenic | 15.0% |
| !! | AATTATCCTTATGGAAAATA+AGG | - | chr6.4:17557763-17557782 | None:intergenic | 20.0% |
| !! | ATTATCCTTATGGAAAATAA+GGG | - | chr6.4:17557762-17557781 | None:intergenic | 20.0% |
| !! | CTCTATTTAAGAAAAAAGTT+TGG | - | chr6.4:17559301-17559320 | None:intergenic | 20.0% |
| !! | GCAGTTAATAAAAAAACTTA+TGG | - | chr6.4:17559177-17559196 | None:intergenic | 20.0% |
| !! | GTTGTTAAAATGGTATAATT+TGG | - | chr6.4:17560289-17560308 | None:intergenic | 20.0% |
| !! | TAAAAATTCTCAAGATAAGA+TGG | + | chr6.4:17561141-17561160 | MS.gene41990:CDS | 20.0% |
| !! | TAAAGATGTTCATAAGATAT+AGG | + | chr6.4:17559681-17559700 | MS.gene41990:intron | 20.0% |
| !! | TATAGTACAACTACATAATA+CGG | + | chr6.4:17558201-17558220 | MS.gene41990:CDS | 20.0% |
| !! | TATATATTCTAACTCAAGAA+AGG | - | chr6.4:17558185-17558204 | None:intergenic | 20.0% |
| !! | TCAATTAAAATTGATGTTCT+TGG | - | chr6.4:17559016-17559035 | None:intergenic | 20.0% |
| !! | TTGCAAAAAGATTAAAGAAA+AGG | + | chr6.4:17561467-17561486 | MS.gene41990:CDS | 20.0% |
| !!! | AATGACGAATTTGTAAATTT+TGG | - | chr6.4:17560331-17560350 | None:intergenic | 20.0% |
| !!! | GCATATGCTTTAAAAAAATA+TGG | + | chr6.4:17559791-17559810 | MS.gene41990:intron | 20.0% |
| !!! | GCTATTTTTCAATTATAAAG+TGG | + | chr6.4:17557444-17557463 | MS.gene41990:intron | 20.0% |
| !!! | TTTAATCTTTTTGCAATACT+AGG | - | chr6.4:17561463-17561482 | None:intergenic | 20.0% |
| ! | AACAGTAAAATCATTCAACT+CGG | - | chr6.4:17556776-17556795 | None:intergenic | 25.0% |
| ! | ACAATTGTGTTATGTTCTAA+AGG | - | chr6.4:17557551-17557570 | None:intergenic | 25.0% |
| ! | ACATCATCAAAACGATTAAT+GGG | - | chr6.4:17559903-17559922 | None:intergenic | 25.0% |
| ! | AGAGTATATTCTTCATTATG+AGG | + | chr6.4:17558531-17558550 | MS.gene41990:CDS | 25.0% |
| ! | AGGGAAAAAATGATCATTAA+GGG | + | chr6.4:17558874-17558893 | MS.gene41990:intron | 25.0% |
| ! | ATCACATAATCACACATAAA+CGG | + | chr6.4:17560352-17560371 | MS.gene41990:intron | 25.0% |
| ! | ATGACTCTTAAATTTGTGAT+AGG | - | chr6.4:17557527-17557546 | None:intergenic | 25.0% |
| ! | ATGGTTCTCAAAATTGATAA+TGG | - | chr6.4:17559100-17559119 | None:intergenic | 25.0% |
| ! | ATTAAAGAAAAGGAAAGAGA+AGG | + | chr6.4:17561477-17561496 | MS.gene41990:CDS | 25.0% |
| ! | CTAGTGATTGTGTATAAATA+GGG | + | chr6.4:17558855-17558874 | MS.gene41990:intron | 25.0% |
| ! | GAGTATATTCTTCATTATGA+GGG | + | chr6.4:17558532-17558551 | MS.gene41990:CDS | 25.0% |
| ! | GTCATTAATGACTTAGTTAA+TGG | - | chr6.4:17560238-17560257 | None:intergenic | 25.0% |
| ! | GTGTGATTATGTTGTTAAAA+TGG | - | chr6.4:17560299-17560318 | None:intergenic | 25.0% |
| ! | GTTCTTAGATTTCAAACAAT+GGG | + | chr6.4:17557466-17557485 | MS.gene41990:intron | 25.0% |
| ! | TAAATGAGAATTATCTCGTA+TGG | - | chr6.4:17561092-17561111 | None:intergenic | 25.0% |
| ! | TACACTTGGCAAAATATAAT+TGG | + | chr6.4:17558811-17558830 | MS.gene41990:intron | 25.0% |
| ! | TACATCATCAAAACGATTAA+TGG | - | chr6.4:17559904-17559923 | None:intergenic | 25.0% |
| ! | TAGGGAAAAAATGATCATTA+AGG | + | chr6.4:17558873-17558892 | MS.gene41990:intron | 25.0% |
| ! | TCATTTCATCAAACACATAA+CGG | - | chr6.4:17557410-17557429 | None:intergenic | 25.0% |
| ! | TTACCAAATTCCTATGAAAA+TGG | - | chr6.4:17559938-17559957 | None:intergenic | 25.0% |
| ! | TTAGAACATAACACAATTGT+TGG | + | chr6.4:17557551-17557570 | MS.gene41990:CDS | 25.0% |
| ! | TTCATATTTCTTAAATAGGC+CGG | - | chr6.4:17559405-17559424 | None:intergenic | 25.0% |
| ! | TTCTAGTAATGAAGAAAGTA+AGG | + | chr6.4:17561339-17561358 | MS.gene41990:CDS | 25.0% |
| ! | TTGGCAAAATATAATTGGTT+GGG | + | chr6.4:17558816-17558835 | MS.gene41990:intron | 25.0% |
| !! | AATAGGCTTAAAAAAAGCAT+AGG | - | chr6.4:17559328-17559347 | None:intergenic | 25.0% |
| !! | ATTTTCATAGGAATTTGGTA+AGG | + | chr6.4:17559937-17559956 | MS.gene41990:intron | 25.0% |
| !! | TAAGATATAGGCTTTTAAAC+AGG | + | chr6.4:17559693-17559712 | MS.gene41990:intron | 25.0% |
| !! | TCTAATATTGTTGGTTATGT+TGG | + | chr6.4:17560813-17560832 | MS.gene41990:intron | 25.0% |
| !! | TTAAGCCTATTTAGCTTAAA+AGG | + | chr6.4:17559337-17559356 | MS.gene41990:intron | 25.0% |
| !! | TTGAGAATTTTTACTTTCAG+AGG | - | chr6.4:17561134-17561153 | None:intergenic | 25.0% |
| !! | TTTTCATAGGAATTTGGTAA+GGG | + | chr6.4:17559938-17559957 | MS.gene41990:intron | 25.0% |
| !!! | ATGCTTTAAAAAAATATGGC+AGG | + | chr6.4:17559795-17559814 | MS.gene41990:intron | 25.0% |
| !!! | ATTGTTTTTGCTATTCTTGA+AGG | + | chr6.4:17558322-17558341 | MS.gene41990:CDS | 25.0% |
| !!! | ATTTTTTTAAAGCATATGCC+TGG | - | chr6.4:17559790-17559809 | None:intergenic | 25.0% |
| !!! | TTGTCATCATGAATTTTGAT+AGG | - | chr6.4:17560756-17560775 | None:intergenic | 25.0% |
| AAAATCATTCAACTCGGAAT+CGG | - | chr6.4:17556770-17556789 | None:intergenic | 30.0% | |
| AAATTCCTATGAAAATGGAG+AGG | - | chr6.4:17559933-17559952 | None:intergenic | 30.0% | |
| AACAACATGCAAAACATCTA+TGG | - | chr6.4:17560697-17560716 | None:intergenic | 30.0% | |
| AACATAACACAATTGTTGGT+AGG | + | chr6.4:17557555-17557574 | MS.gene41990:CDS | 30.0% | |
| AACGACGAATTTGTGTAATT+TGG | - | chr6.4:17560379-17560398 | None:intergenic | 30.0% | |
| AAGCTAATGCAAAGATCAAA+TGG | - | chr6.4:17558492-17558511 | None:intergenic | 30.0% | |
| AATGTGAATCTCATCTTGAA+TGG | - | chr6.4:17557130-17557149 | None:intergenic | 30.0% | |
| AATTCCTATGAAAATGGAGA+GGG | - | chr6.4:17559932-17559951 | None:intergenic | 30.0% | |
| AATTGATCCATTGTTTGAAG+TGG | + | chr6.4:17557934-17557953 | MS.gene41990:CDS | 30.0% | |
| ACAACATGCAAAACATCTAT+GGG | - | chr6.4:17560696-17560715 | None:intergenic | 30.0% | |
| AGCTAATGCAAAGATCAAAT+GGG | - | chr6.4:17558491-17558510 | None:intergenic | 30.0% | |
| AGGGAAACTTGCAAAAAATT+AGG | - | chr6.4:17559968-17559987 | None:intergenic | 30.0% | |
| ATAGCAAAAACAATTGTAGC+AGG | - | chr6.4:17558316-17558335 | None:intergenic | 30.0% | |
| ATATAATTGGTTGGGGTAAA+TGG | + | chr6.4:17558824-17558843 | MS.gene41990:intron | 30.0% | |
| ATATCCCATAACATGATACT+TGG | - | chr6.4:17558061-17558080 | None:intergenic | 30.0% | |
| ATGTGAATCTCATCTTGAAT+GGG | - | chr6.4:17557129-17557148 | None:intergenic | 30.0% | |
| ATTAGTACTACATTCTCCAA+GGG | - | chr6.4:17560951-17560970 | None:intergenic | 30.0% | |
| ATTTCTGTGAGCATTTGAAA+TGG | - | chr6.4:17556712-17556731 | None:intergenic | 30.0% | |
| CAAATCAGAGTTCATAATGT+TGG | + | chr6.4:17556955-17556974 | MS.gene41990:CDS | 30.0% | |
| CAAATGCTGAATTATCCTTA+TGG | - | chr6.4:17557772-17557791 | None:intergenic | 30.0% | |
| CAACAATATTAGACACCATA+GGG | - | chr6.4:17560806-17560825 | None:intergenic | 30.0% | |
| CATCATCAAAACGATTAATG+GGG | - | chr6.4:17559902-17559921 | None:intergenic | 30.0% | |
| CTTGGCAAAATATAATTGGT+TGG | + | chr6.4:17558815-17558834 | MS.gene41990:intron | 30.0% | |
| GCTAGTGATTGTGTATAAAT+AGG | + | chr6.4:17558854-17558873 | MS.gene41990:intron | 30.0% | |
| GGGAAAAAATGATCATTAAG+GGG | + | chr6.4:17558875-17558894 | MS.gene41990:intron | 30.0% | |
| GGTTCTTAGATTTCAAACAA+TGG | + | chr6.4:17557465-17557484 | MS.gene41990:intron | 30.0% | |
| TAAATATCACCCTTCTGTAA+TGG | - | chr6.4:17559119-17559138 | None:intergenic | 30.0% | |
| TAACATGAATAACCACATCA+AGG | - | chr6.4:17557976-17557995 | None:intergenic | 30.0% | |
| TCAAGTGTATGAAGTTGTAT+TGG | + | chr6.4:17557898-17557917 | MS.gene41990:CDS | 30.0% | |
| TCGACATGCAAATTGATATT+TGG | - | chr6.4:17557012-17557031 | None:intergenic | 30.0% | |
| TGAAAGTTGAAGTAGTTGAT+TGG | + | chr6.4:17558023-17558042 | MS.gene41990:CDS | 30.0% | |
| TGATATATCTATGAACGAGT+TGG | + | chr6.4:17556489-17556508 | MS.gene41990:CDS | 30.0% | |
| TGATGAATTTGACAAGGAAA+AGG | + | chr6.4:17561276-17561295 | MS.gene41990:CDS | 30.0% | |
| TGGCAAAATATAATTGGTTG+GGG | + | chr6.4:17558817-17558836 | MS.gene41990:intron | 30.0% | |
| TTCAAAGCACATTCATTAGA+AGG | - | chr6.4:17558271-17558290 | None:intergenic | 30.0% | |
| TTCCATTGTTGAATCTCTAA+AGG | + | chr6.4:17560994-17561013 | MS.gene41990:intron | 30.0% | |
| TTTAAGAAAAAAGTTTGGCC+TGG | - | chr6.4:17559296-17559315 | None:intergenic | 30.0% | |
| ! | AAGTTTGGGTTATTTGTTCT+TGG | - | chr6.4:17560511-17560530 | None:intergenic | 30.0% |
| ! | ATCAGTATACAAACTAGTCT+TGG | - | chr6.4:17560733-17560752 | None:intergenic | 30.0% |
| ! | ATTCTGATGATGAACCTATT+GGG | + | chr6.4:17561425-17561444 | MS.gene41990:CDS | 30.0% |
| ! | CAAGAAGTTTCTGATAATGA+AGG | + | chr6.4:17561184-17561203 | MS.gene41990:CDS | 30.0% |
| ! | TATGGTGATGATAAAAGTAG+TGG | + | chr6.4:17561220-17561239 | MS.gene41990:CDS | 30.0% |
| ! | TCTCCATTTTCATAGGAATT+TGG | + | chr6.4:17559932-17559951 | MS.gene41990:intron | 30.0% |
| ! | TTCCTTTAGAGATTCAACAA+TGG | - | chr6.4:17560999-17561018 | None:intergenic | 30.0% |
| !! | AATTGCTTTGGAAGTAACTT+GGG | + | chr6.4:17558669-17558688 | MS.gene41990:intron | 30.0% |
| !! | AGGACAAGGTTGATTTTAAT+GGG | + | chr6.4:17558749-17558768 | MS.gene41990:intron | 30.0% |
| !! | ATTTTGAGAACCATTACAGA+AGG | + | chr6.4:17559106-17559125 | MS.gene41990:intron | 30.0% |
| !! | TACATCACTTTTCCATCATT+TGG | + | chr6.4:17558402-17558421 | MS.gene41990:CDS | 30.0% |
| !! | TGATGATATTTTGAATGCAG+AGG | + | chr6.4:17561396-17561415 | MS.gene41990:CDS | 30.0% |
| !! | TTATGAACTCTGATTTGTTC+CGG | - | chr6.4:17556952-17556971 | None:intergenic | 30.0% |
| !! | TTTTGAGAACCATTACAGAA+GGG | + | chr6.4:17559107-17559126 | MS.gene41990:intron | 30.0% |
| !!! | AATTTTTTGCAAGTTTCCCT+TGG | + | chr6.4:17559968-17559987 | MS.gene41990:intron | 30.0% |
| !!! | ACCTGGTAATTTTAACTCTT+TGG | + | chr6.4:17557642-17557661 | MS.gene41990:intron | 30.0% |
| !!! | TCTATCCCTTATTTTCCATA+AGG | + | chr6.4:17557754-17557773 | MS.gene41990:intron | 30.0% |
| AAAAGCCTCTTAAGCCTATT+AGG | + | chr6.4:17559379-17559398 | MS.gene41990:intron | 35.0% | |
| AAACTTACAGATTCAGACCA+TGG | + | chr6.4:17559199-17559218 | MS.gene41990:intron | 35.0% | |
| AACCTCCAAGTATCATGTTA+TGG | + | chr6.4:17558053-17558072 | MS.gene41990:CDS | 35.0% | |
| AACTGCTTTGTCCATACAAA+GGG | + | chr6.4:17558586-17558605 | MS.gene41990:intron | 35.0% | |
| AATCTCATCTTGAATGGGAA+GGG | - | chr6.4:17557124-17557143 | None:intergenic | 35.0% | |
| ACAGTTGTATCCATCAGTTT+CGG | - | chr6.4:17556880-17556899 | None:intergenic | 35.0% | |
| ACCTCCAAGTATCATGTTAT+GGG | + | chr6.4:17558054-17558073 | MS.gene41990:CDS | 35.0% | |
| ACTTCAACTTTCACAATGTG+TGG | - | chr6.4:17558016-17558035 | None:intergenic | 35.0% | |
| ACTTCTTCAATGTTGCATTG+AGG | - | chr6.4:17556531-17556550 | None:intergenic | 35.0% | |
| AGCACATGAGAAAATACACT+TGG | + | chr6.4:17558797-17558816 | MS.gene41990:intron | 35.0% | |
| AGGAAAAGAAAATCATCGGT+TGG | - | chr6.4:17556928-17556947 | None:intergenic | 35.0% | |
| AGGCTTGATTAAGGAAGAAT+GGG | - | chr6.4:17560060-17560079 | None:intergenic | 35.0% | |
| AGGTAAACTCTGCCTTAATA+AGG | - | chr6.4:17560091-17560110 | None:intergenic | 35.0% | |
| AGTAAGGATAATGAATCTGC+TGG | + | chr6.4:17561355-17561374 | MS.gene41990:CDS | 35.0% | |
| AGTTTCGGATGATTCTGATT+CGG | - | chr6.4:17556740-17556759 | None:intergenic | 35.0% | |
| ATCCTCTCAATTCAACCAAT+GGG | + | chr6.4:17558609-17558628 | MS.gene41990:intron | 35.0% | |
| ATTCCTATGAAAATGGAGAG+GGG | - | chr6.4:17559931-17559950 | None:intergenic | 35.0% | |
| CAAATGGGTAGTACTTAGTA+TGG | - | chr6.4:17558476-17558495 | None:intergenic | 35.0% | |
| CAACATGCAAAACATCTATG+GGG | - | chr6.4:17560695-17560714 | None:intergenic | 35.0% | |
| CAAGGAAAAGGAATATGAAC+AGG | + | chr6.4:17557254-17557273 | MS.gene41990:intron | 35.0% | |
| CAATATTCTCACTACTTGTG+TGG | - | chr6.4:17557619-17557638 | None:intergenic | 35.0% | |
| CACACAAGTAGTGAGAATAT+TGG | + | chr6.4:17557617-17557636 | MS.gene41990:CDS | 35.0% | |
| CACATCTCATTCTTCTACTA+AGG | - | chr6.4:17560146-17560165 | None:intergenic | 35.0% | |
| CACCATCATTATTTGCCATA+GGG | - | chr6.4:17558153-17558172 | None:intergenic | 35.0% | |
| CACTATGATATACCTTGATG+TGG | + | chr6.4:17557961-17557980 | MS.gene41990:CDS | 35.0% | |
| CCAACAATATTAGACACCAT+AGG | - | chr6.4:17560807-17560826 | None:intergenic | 35.0% | |
| CCTATGGTGTCTAATATTGT+TGG | + | chr6.4:17560804-17560823 | MS.gene41990:intron | 35.0% | |
| CGGAAGGAAAAGAAAATCAT+CGG | - | chr6.4:17556932-17556951 | None:intergenic | 35.0% | |
| CTTAGTAGAAGAATGAGATG+TGG | + | chr6.4:17560144-17560163 | MS.gene41990:intron | 35.0% | |
| CTTCAACTTTCACAATGTGT+GGG | - | chr6.4:17558015-17558034 | None:intergenic | 35.0% | |
| GAACCTTCATATAGCACAAA+AGG | - | chr6.4:17558249-17558268 | None:intergenic | 35.0% | |
| GATAAGATGGTTACTGATGA+AGG | + | chr6.4:17561154-17561173 | MS.gene41990:CDS | 35.0% | |
| GATTAGTACTACATTCTCCA+AGG | - | chr6.4:17560952-17560971 | None:intergenic | 35.0% | |
| GCCAAAGAGTTAAAATTACC+AGG | - | chr6.4:17557646-17557665 | None:intergenic | 35.0% | |
| GCCTAACTATTCCCTTATTA+AGG | + | chr6.4:17560076-17560095 | MS.gene41990:intron | 35.0% | |
| GCCTTAATAAGGGAATAGTT+AGG | - | chr6.4:17560080-17560099 | None:intergenic | 35.0% | |
| GGAATAGTTAGGCTTGATTA+AGG | - | chr6.4:17560069-17560088 | None:intergenic | 35.0% | |
| GGATTTAATCTTCTCCCAAT+AGG | - | chr6.4:17561442-17561461 | None:intergenic | 35.0% | |
| GGTAAACTCTGCCTTAATAA+GGG | - | chr6.4:17560090-17560109 | None:intergenic | 35.0% | |
| GGTACTCTCTATTAGAGTAA+TGG | + | chr6.4:17558939-17558958 | MS.gene41990:intron | 35.0% | |
| GTCTAGTGATGAATTTGACA+AGG | + | chr6.4:17561270-17561289 | MS.gene41990:CDS | 35.0% | |
| TAAAATCAACCTTGTCCTCA+AGG | - | chr6.4:17558747-17558766 | None:intergenic | 35.0% | |
| TAACTGCTTTGTCCATACAA+AGG | + | chr6.4:17558585-17558604 | MS.gene41990:intron | 35.0% | |
| TAGGCTTGATTAAGGAAGAA+TGG | - | chr6.4:17560061-17560080 | None:intergenic | 35.0% | |
| TATTCTTGAAGGTCTATCTG+TGG | + | chr6.4:17558333-17558352 | MS.gene41990:CDS | 35.0% | |
| TCACCATCATTATTTGCCAT+AGG | - | chr6.4:17558154-17558173 | None:intergenic | 35.0% | |
| TGAAGCAAAGACAATGTTGT+TGG | - | chr6.4:17558711-17558730 | None:intergenic | 35.0% | |
| TGCAACATTGAAGAAGTTCA+TGG | + | chr6.4:17556534-17556553 | MS.gene41990:CDS | 35.0% | |
| TTAAAAAAATATGGCAGGCC+AGG | + | chr6.4:17559800-17559819 | MS.gene41990:intron | 35.0% | |
| TTAATGGGGAACCAATCTTA+AGG | - | chr6.4:17559888-17559907 | None:intergenic | 35.0% | |
| TTATGGGATATCACTTTGAG+TGG | + | chr6.4:17558070-17558089 | MS.gene41990:CDS | 35.0% | |
| TTCCTATCAAGAGGAAAACT+AGG | + | chr6.4:17560623-17560642 | MS.gene41990:CDS | 35.0% | |
| TTGGAAAGGTTCAATTGCTT+TGG | + | chr6.4:17558657-17558676 | MS.gene41990:intron | 35.0% | |
| ! | AAAGAAAATCATCGGTTGGA+TGG | - | chr6.4:17556924-17556943 | None:intergenic | 35.0% |
| ! | AACACAATTGTTGGTAGGAA+TGG | + | chr6.4:17557560-17557579 | MS.gene41990:CDS | 35.0% |
| ! | AACCATAGTCTAGAGCAATA+GGG | - | chr6.4:17557317-17557336 | None:intergenic | 35.0% |
| ! | AAGAAAATCATCGGTTGGAT+GGG | - | chr6.4:17556923-17556942 | None:intergenic | 35.0% |
| ! | AGAATGAGATGTGGTTCTAT+AGG | + | chr6.4:17560153-17560172 | MS.gene41990:intron | 35.0% |
| ! | AGTTTGACTTCACAAGGAAA+AGG | + | chr6.4:17557242-17557261 | MS.gene41990:intron | 35.0% |
| ! | ATAATCAGCACGAGGTTTTA+GGG | - | chr6.4:17559591-17559610 | None:intergenic | 35.0% |
| ! | CGATGATTTTCTTTTCCTTC+CGG | + | chr6.4:17556930-17556949 | MS.gene41990:CDS | 35.0% |
| ! | GAATGTGCTTTGAATCTAGT+GGG | + | chr6.4:17558277-17558296 | MS.gene41990:CDS | 35.0% |
| ! | GATTCTGATGATGAACCTAT+TGG | + | chr6.4:17561424-17561443 | MS.gene41990:CDS | 35.0% |
| ! | GTCATCGTTGTTGCTAATTT+TGG | - | chr6.4:17557048-17557067 | None:intergenic | 35.0% |
| ! | TAACCATAGTCTAGAGCAAT+AGG | - | chr6.4:17557318-17557337 | None:intergenic | 35.0% |
| ! | TATATCTATGAACGAGTTGG+AGG | + | chr6.4:17556492-17556511 | MS.gene41990:CDS | 35.0% |
| ! | TCACCTTTTGTGCTATATGA+AGG | + | chr6.4:17558243-17558262 | MS.gene41990:CDS | 35.0% |
| ! | TGAATGTGCTTTGAATCTAG+TGG | + | chr6.4:17558276-17558295 | MS.gene41990:CDS | 35.0% |
| ! | TTTTCCTTGTGAAGTCAAAC+TGG | - | chr6.4:17557243-17557262 | None:intergenic | 35.0% |
| !! | ACAAGGTTGATTTTAATGGG+GGG | + | chr6.4:17558752-17558771 | MS.gene41990:intron | 35.0% |
| !! | AGTTTTGTGGCACAACATTT+TGG | + | chr6.4:17557838-17557857 | MS.gene41990:CDS | 35.0% |
| !! | CAATTGCTTTGGAAGTAACT+TGG | + | chr6.4:17558668-17558687 | MS.gene41990:intron | 35.0% |
| !! | GACAAGGTTGATTTTAATGG+GGG | + | chr6.4:17558751-17558770 | MS.gene41990:intron | 35.0% |
| !! | GAGGACAAGGTTGATTTTAA+TGG | + | chr6.4:17558748-17558767 | MS.gene41990:intron | 35.0% |
| !! | GGACAAGGTTGATTTTAATG+GGG | + | chr6.4:17558750-17558769 | MS.gene41990:intron | 35.0% |
| !! | TACATCTGATTTTGACCCTA+TGG | + | chr6.4:17560788-17560807 | MS.gene41990:intron | 35.0% |
| !! | TAGTCCTTTGTTGTTACAAG+TGG | + | chr6.4:17557796-17557815 | MS.gene41990:intron | 35.0% |
| !! | TATCTTGGTGTTGGTTTGAA+TGG | + | chr6.4:17557291-17557310 | MS.gene41990:CDS | 35.0% |
| !! | TATTTTGAATGCAGAGGATC+TGG | + | chr6.4:17561402-17561421 | MS.gene41990:CDS | 35.0% |
| AAGGACATGTGAGCATCAAT+AGG | - | chr6.4:17559869-17559888 | None:intergenic | 40.0% | |
| AAGTAGTGGTTCAGAAAGTG+AGG | + | chr6.4:17561234-17561253 | MS.gene41990:CDS | 40.0% | |
| AGCATCAATCACCTCTGATT+CGG | - | chr6.4:17556806-17556825 | None:intergenic | 40.0% | |
| AGGACATGTGAGCATCAATA+GGG | - | chr6.4:17559868-17559887 | None:intergenic | 40.0% | |
| AGTCTCCTATTCTCTCAATG+AGG | + | chr6.4:17560028-17560047 | MS.gene41990:intron | 40.0% | |
| ATCTCATCTTGAATGGGAAG+GGG | - | chr6.4:17557123-17557142 | None:intergenic | 40.0% | |
| ATGTGAGCATCAATAGGGAT+GGG | - | chr6.4:17559863-17559882 | None:intergenic | 40.0% | |
| ATTAAGGCAGAGTTTACCTG+AGG | + | chr6.4:17560092-17560111 | MS.gene41990:intron | 40.0% | |
| ATTGAGAGGATCCCTTTGTA+TGG | - | chr6.4:17558600-17558619 | None:intergenic | 40.0% | |
| CAACACCAAGATAAACGACA+AGG | - | chr6.4:17557284-17557303 | None:intergenic | 40.0% | |
| CAATCGTCTTAGCAGATCTA+GGG | - | chr6.4:17560881-17560900 | None:intergenic | 40.0% | |
| CACAAAAGGTGAACCTGATA+TGG | - | chr6.4:17558235-17558254 | None:intergenic | 40.0% | |
| CACCCTATGGCAAATAATGA+TGG | + | chr6.4:17558148-17558167 | MS.gene41990:CDS | 40.0% | |
| CGTTCTCTTGTTCATTGGAA+AGG | + | chr6.4:17558643-17558662 | MS.gene41990:intron | 40.0% | |
| CTAAAAAGTAGGCCTATGAC+AGG | + | chr6.4:17559757-17559776 | MS.gene41990:intron | 40.0% | |
| CTCTTGATAGGAACAGGAAT+GGG | - | chr6.4:17560616-17560635 | None:intergenic | 40.0% | |
| CTCTTTGGCAATGTGATGTA+TGG | + | chr6.4:17557657-17557676 | MS.gene41990:intron | 40.0% | |
| GAAATTGGTTGCACTTCAAG+TGG | + | chr6.4:17556633-17556652 | MS.gene41990:CDS | 40.0% | |
| GAAGGTGAAAAGATTGCGTA+TGG | + | chr6.4:17561202-17561221 | MS.gene41990:CDS | 40.0% | |
| GAATCTCATCTTGAATGGGA+AGG | - | chr6.4:17557125-17557144 | None:intergenic | 40.0% | |
| GATCCTCTCAATTCAACCAA+TGG | + | chr6.4:17558608-17558627 | MS.gene41990:intron | 40.0% | |
| GATTTCAAACAATGGGATCC+AGG | + | chr6.4:17557473-17557492 | MS.gene41990:intron | 40.0% | |
| GCAGATATGTCACTGCATAT+AGG | - | chr6.4:17558454-17558473 | None:intergenic | 40.0% | |
| GTCATCATACTTACACGAGA+AGG | - | chr6.4:17560673-17560692 | None:intergenic | 40.0% | |
| GTTCAAACCACCATTAGAAG+CGG | - | chr6.4:17556662-17556681 | None:intergenic | 40.0% | |
| TACTCTATCAGCAAGCTTCA+AGG | + | chr6.4:17557724-17557743 | MS.gene41990:CDS | 40.0% | |
| TAGGACTCCTAATGCGAAAA+AGG | + | chr6.4:17560642-17560661 | MS.gene41990:CDS | 40.0% | |
| TATGAGGAAGAAGAGAATGC+TGG | + | chr6.4:17561313-17561332 | MS.gene41990:CDS | 40.0% | |
| TATGTCACTGCATATAGGAG+TGG | - | chr6.4:17558449-17558468 | None:intergenic | 40.0% | |
| TCAAGCCTCATTGAGAGAAT+AGG | - | chr6.4:17560036-17560055 | None:intergenic | 40.0% | |
| TCAATTCAACCAATGGGATC+CGG | + | chr6.4:17558615-17558634 | MS.gene41990:intron | 40.0% | |
| TCAGTTGCCTGATACATCTT+AGG | - | chr6.4:17560476-17560495 | None:intergenic | 40.0% | |
| TCCCATAACATGATACTTGG+AGG | - | chr6.4:17558058-17558077 | None:intergenic | 40.0% | |
| TGATGTTAATGAGTCACCCT+TGG | + | chr6.4:17560932-17560951 | MS.gene41990:intron | 40.0% | |
| TGCTCACATGTCCTTAAGAT+TGG | + | chr6.4:17559874-17559893 | MS.gene41990:intron | 40.0% | |
| TTCCTATGAAAATGGAGAGG+GGG | - | chr6.4:17559930-17559949 | None:intergenic | 40.0% | |
| TTGCACTTAAACCATACTCC+AGG | + | chr6.4:17557699-17557718 | MS.gene41990:intron | 40.0% | |
| TTGTCTTTGCTTCAACCTTG+AGG | + | chr6.4:17558717-17558736 | MS.gene41990:intron | 40.0% | |
| ! | AGGCTTTTAAACAGGCTAGT+AGG | + | chr6.4:17559701-17559720 | MS.gene41990:intron | 40.0% |
| ! | ATATTTGGCTTCACAGCTTC+TGG | - | chr6.4:17556997-17557016 | None:intergenic | 40.0% |
| ! | ATCCCATTGGTTGAATTGAG+AGG | - | chr6.4:17558614-17558633 | None:intergenic | 40.0% |
| ! | ATTGCCAGTTTGACTTCACA+AGG | + | chr6.4:17557236-17557255 | MS.gene41990:intron | 40.0% |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | + | chr6.4:17559342-17559361 | MS.gene41990:intron | 40.0% |
| ! | CGCATAGATGATTTTTGCCA+AGG | + | chr6.4:17560442-17560461 | MS.gene41990:intron | 40.0% |
| ! | CTTGCCACTTGTAACAACAA+AGG | - | chr6.4:17557803-17557822 | None:intergenic | 40.0% |
| ! | CTTGTCGTTTATCTTGGTGT+TGG | + | chr6.4:17557282-17557301 | MS.gene41990:CDS | 40.0% |
| ! | GATAATCAGCACGAGGTTTT+AGG | - | chr6.4:17559592-17559611 | None:intergenic | 40.0% |
| ! | GATCCATTGTTTGAAGTGGT+GGG | + | chr6.4:17557938-17557957 | MS.gene41990:CDS | 40.0% |
| ! | GTACTCCTTGTCGTTTATCT+TGG | + | chr6.4:17557276-17557295 | MS.gene41990:CDS | 40.0% |
| ! | GTTGACGATTGCTCATGTTT+TGG | + | chr6.4:17556837-17556856 | MS.gene41990:CDS | 40.0% |
| ! | GTTTTCCTCTTGATAGGAAC+AGG | - | chr6.4:17560622-17560641 | None:intergenic | 40.0% |
| ! | TAGTGAGAATATTGGCTACC+TGG | + | chr6.4:17557625-17557644 | MS.gene41990:CDS | 40.0% |
| ! | TGATCCATTGTTTGAAGTGG+TGG | + | chr6.4:17557937-17557956 | MS.gene41990:CDS | 40.0% |
| ! | TTAGCAGATCTAGGGTTTAC+TGG | - | chr6.4:17560873-17560892 | None:intergenic | 40.0% |
| ! | TTGTTGTTACAAGTGGCAAG+TGG | + | chr6.4:17557803-17557822 | MS.gene41990:intron | 40.0% |
| ! | TTTTGCAAGTTTCCCTTGGT+GGG | + | chr6.4:17559972-17559991 | MS.gene41990:intron | 40.0% |
| ! | TTTTTGCAAGTTTCCCTTGG+TGG | + | chr6.4:17559971-17559990 | MS.gene41990:intron | 40.0% |
| !! | AGTGAACAAGGTACTGATGT+TGG | - | chr6.4:17557385-17557404 | None:intergenic | 40.0% |
| !! | ATCTTTGCATTAGCTTGCGA+GGG | + | chr6.4:17558496-17558515 | MS.gene41990:CDS | 40.0% |
| !! | CAAGGTTGATTTTAATGGGG+GGG | + | chr6.4:17558753-17558772 | MS.gene41990:intron | 40.0% |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | - | chr6.4:17559345-17559364 | None:intergenic | 40.0% |
| !! | CTCTTTTGATAATCAGCACG+AGG | - | chr6.4:17559599-17559618 | None:intergenic | 40.0% |
| !! | GGATTGACCTTTTTCGCATT+AGG | - | chr6.4:17560652-17560671 | None:intergenic | 40.0% |
| !! | GTCCTAGTTTTCCTCTTGAT+AGG | - | chr6.4:17560628-17560647 | None:intergenic | 40.0% |
| !! | TACAAACTAGTCTTGGTGTG+AGG | - | chr6.4:17560726-17560745 | None:intergenic | 40.0% |
| !! | TGAATCTGCTGGTGTTGATA+AGG | + | chr6.4:17561366-17561385 | MS.gene41990:CDS | 40.0% |
| !!! | CTGTCATAGGCCTACTTTTT+AGG | - | chr6.4:17559759-17559778 | None:intergenic | 40.0% |
| !!! | TGGTGTTCGTTGCTTTTCAT+GGG | - | chr6.4:17557090-17557109 | None:intergenic | 40.0% |
| !!! | TTGGTGTTCGTTGCTTTTCA+TGG | - | chr6.4:17557091-17557110 | None:intergenic | 40.0% |
| AAGTCTCTCCTCTCTCTCTT+TGG | + | chr6.4:17558918-17558937 | MS.gene41990:intron | 45.0% | |
| AATAGGGATGGGAATAGGCT+AGG | - | chr6.4:17559852-17559871 | None:intergenic | 45.0% | |
| ACCCAAACTTCTCCCAAGTT+AGG | + | chr6.4:17560521-17560540 | MS.gene41990:intron | 45.0% | |
| ACCCTAACTTGGGAGAAGTT+TGG | - | chr6.4:17560526-17560545 | None:intergenic | 45.0% | |
| AGAGCGAGTAACCCTAACTT+GGG | - | chr6.4:17560536-17560555 | None:intergenic | 45.0% | |
| AGGTGAACCTGATATGGTTC+AGG | - | chr6.4:17558229-17558248 | None:intergenic | 45.0% | |
| ATGAGCATCAGTTTGAGCCA+AGG | - | chr6.4:17561062-17561081 | None:intergenic | 45.0% | |
| CAATTCAACCAATGGGATCC+GGG | + | chr6.4:17558616-17558635 | MS.gene41990:intron | 45.0% | |
| CATGTGAGCATCAATAGGGA+TGG | - | chr6.4:17559864-17559883 | None:intergenic | 45.0% | |
| CATTAACCTTGCACGTAACC+AGG | + | chr6.4:17558095-17558114 | MS.gene41990:CDS | 45.0% | |
| CATTTGGCTGCTTGTGAGAT+GGG | + | chr6.4:17558418-17558437 | MS.gene41990:CDS | 45.0% | |
| CCAATCGTCTTAGCAGATCT+AGG | - | chr6.4:17560882-17560901 | None:intergenic | 45.0% | |
| CCATTCCTGTTCCTATCAAG+AGG | + | chr6.4:17560614-17560633 | MS.gene41990:CDS | 45.0% | |
| CCCAAACTTCTCCCAAGTTA+GGG | + | chr6.4:17560522-17560541 | MS.gene41990:intron | 45.0% | |
| CCCTAACTTGGGAGAAGTTT+GGG | - | chr6.4:17560525-17560544 | None:intergenic | 45.0% | |
| CCTAGATCTGCTAAGACGAT+TGG | + | chr6.4:17560879-17560898 | MS.gene41990:intron | 45.0% | |
| CCTCTTGATAGGAACAGGAA+TGG | - | chr6.4:17560617-17560636 | None:intergenic | 45.0% | |
| CGCAACATTAGAGAGGGTTA+TGG | - | chr6.4:17561023-17561042 | None:intergenic | 45.0% | |
| CTTAAATAGGCCGGCCTAAT+AGG | - | chr6.4:17559396-17559415 | None:intergenic | 45.0% | |
| GACAAAGCAGTTACTGAGCA+AGG | - | chr6.4:17558578-17558597 | None:intergenic | 45.0% | |
| GATAGAGTAAGCCTGGAGTA+TGG | - | chr6.4:17557713-17557732 | None:intergenic | 45.0% | |
| GATGATACGACAATACCTGC+TGG | + | chr6.4:17558117-17558136 | MS.gene41990:CDS | 45.0% | |
| GCACTCGTTACAACTTCAGA+AGG | - | chr6.4:17560574-17560593 | None:intergenic | 45.0% | |
| GCATCAATAGGGATGGGAAT+AGG | - | chr6.4:17559857-17559876 | None:intergenic | 45.0% | |
| GCATCAATCACCTCTGATTC+GGG | - | chr6.4:17556805-17556824 | None:intergenic | 45.0% | |
| GGAATGGGAACCACAAAGAT+AGG | - | chr6.4:17560601-17560620 | None:intergenic | 45.0% | |
| GGACTCATAGACTCAGAAGT+GGG | - | chr6.4:17560852-17560871 | None:intergenic | 45.0% | |
| GGCTGATCAAAGCATGTATG+AGG | + | chr6.4:17561297-17561316 | MS.gene41990:CDS | 45.0% | |
| GGTTGGGGTAAATGGACATT+TGG | + | chr6.4:17558832-17558851 | MS.gene41990:intron | 45.0% | |
| TAGAGCGAGTAACCCTAACT+TGG | - | chr6.4:17560537-17560556 | None:intergenic | 45.0% | |
| TATCATCCTGGTTACGTGCA+AGG | - | chr6.4:17558104-17558123 | None:intergenic | 45.0% | |
| TCAATGTTGCATTGAGGCCT+TGG | - | chr6.4:17556525-17556544 | None:intergenic | 45.0% | |
| TCATTCAACTCGGAATCGGA+AGG | - | chr6.4:17556766-17556785 | None:intergenic | 45.0% | |
| TCATTTGGCTGCTTGTGAGA+TGG | + | chr6.4:17558417-17558436 | MS.gene41990:CDS | 45.0% | |
| TCCTATGAAAATGGAGAGGG+GGG | - | chr6.4:17559929-17559948 | None:intergenic | 45.0% | |
| TCTCACAAGCAGCCAAATGA+TGG | - | chr6.4:17558417-17558436 | None:intergenic | 45.0% | |
| TGAAGGTCTATCTGTGGCTA+TGG | + | chr6.4:17558339-17558358 | MS.gene41990:CDS | 45.0% | |
| TGATGCTTAGGGATGGGAAT+AGG | + | chr6.4:17559223-17559242 | MS.gene41990:intron | 45.0% | |
| TGGACTCATAGACTCAGAAG+TGG | - | chr6.4:17560853-17560872 | None:intergenic | 45.0% | |
| TGTTTCAAAGCCCGAATCAG+AGG | + | chr6.4:17556792-17556811 | MS.gene41990:CDS | 45.0% | |
| ! | CAAGTGGATTCCGCTTCTAA+TGG | + | chr6.4:17556649-17556668 | MS.gene41990:CDS | 45.0% |
| ! | CAGACCATGGTTGATGCTTA+GGG | + | chr6.4:17559212-17559231 | MS.gene41990:intron | 45.0% |
| ! | CAGGTATTGTCGTATCATCC+TGG | - | chr6.4:17558116-17558135 | None:intergenic | 45.0% |
| ! | CATGGTTGATGCTTAGGGAT+GGG | + | chr6.4:17559217-17559236 | MS.gene41990:intron | 45.0% |
| ! | TCAGACCATGGTTGATGCTT+AGG | + | chr6.4:17559211-17559230 | MS.gene41990:intron | 45.0% |
| !! | AGAGAGTACCAAAGAGAGAG+AGG | - | chr6.4:17558929-17558948 | None:intergenic | 45.0% |
| !! | CACATAACGGACAGTGAACA+AGG | - | chr6.4:17557397-17557416 | None:intergenic | 45.0% |
| !! | GAACTCTGATTTGTTCCGGA+AGG | - | chr6.4:17556948-17556967 | None:intergenic | 45.0% |
| !! | GACGATTGCTCATGTTTTGG+AGG | + | chr6.4:17556840-17556859 | MS.gene41990:CDS | 45.0% |
| !! | GATCTTTGCATTAGCTTGCG+AGG | + | chr6.4:17558495-17558514 | MS.gene41990:CDS | 45.0% |
| !! | GCACTGGCATCATAGTTTTG+TGG | + | chr6.4:17557825-17557844 | MS.gene41990:CDS | 45.0% |
| !! | GGCTTAAGAGGCTTTTTGAG+AGG | - | chr6.4:17559375-17559394 | None:intergenic | 45.0% |
| AAATATGGCAGGCCAGGCTT+AGG | + | chr6.4:17559806-17559825 | MS.gene41990:intron | 50.0% | |
| AACCCTCTCTAATGTTGCGC+CGG | + | chr6.4:17561024-17561043 | MS.gene41990:CDS | 50.0% | |
| AAGCAGTTACTGAGCAAGGC+AGG | - | chr6.4:17558574-17558593 | None:intergenic | 50.0% | |
| AAGGCAGAGTTTACCTGAGG+CGG | + | chr6.4:17560095-17560114 | MS.gene41990:intron | 50.0% | |
| AATAGGCCAGGACGGCTTAT+AGG | + | chr6.4:17559240-17559259 | MS.gene41990:intron | 50.0% | |
| AATCCGATCCATACGCGAGA+TGG | - | chr6.4:17556608-17556627 | None:intergenic | 50.0% | |
| AGCAAAAGAACGCCCACCAA+GGG | - | chr6.4:17559987-17560006 | None:intergenic | 50.0% | |
| ATAGGCCAGGACGGCTTATA+GGG | + | chr6.4:17559241-17559260 | MS.gene41990:intron | 50.0% | |
| ATCCGGCGCAACATTAGAGA+GGG | - | chr6.4:17561029-17561048 | None:intergenic | 50.0% | |
| ATGGGATCCAGGTGCAATCA+AGG | + | chr6.4:17557484-17557503 | MS.gene41990:intron | 50.0% | |
| CAACCTTGAGGACAACCTTG+AGG | + | chr6.4:17558729-17558748 | MS.gene41990:intron | 50.0% | |
| CAACGTGAGTTAACTCACGC+TGG | + | chr6.4:17560177-17560196 | MS.gene41990:intron | 50.0% | |
| CACTGCATATAGGAGTGGCA+GGG | - | chr6.4:17558444-17558463 | None:intergenic | 50.0% | |
| CAGACTCGGGCCTAAAAAGT+AGG | + | chr6.4:17559746-17559765 | MS.gene41990:intron | 50.0% | |
| CAGGTGCAATCAAGGCTCTA+AGG | + | chr6.4:17557492-17557511 | MS.gene41990:intron | 50.0% | |
| CCATCCCTAAGCATCAACCA+TGG | - | chr6.4:17559219-17559238 | None:intergenic | 50.0% | |
| CTTAGAGCCTTGATTGCACC+TGG | - | chr6.4:17557494-17557513 | None:intergenic | 50.0% | |
| CTTCCATCTCGCGTATGGAT+CGG | + | chr6.4:17556602-17556621 | MS.gene41990:CDS | 50.0% | |
| GACTGAGACAGCATGAACGA+CGG | - | chr6.4:17557213-17557232 | None:intergenic | 50.0% | |
| GAGGAAGAAGAGAATGCTGG+TGG | + | chr6.4:17561316-17561335 | MS.gene41990:CDS | 50.0% | |
| GCCTCTTAAGCCTATTAGGC+CGG | + | chr6.4:17559383-17559402 | MS.gene41990:intron | 50.0% | |
| GGAATCGGAAGGAGCAGTTT+CGG | - | chr6.4:17556755-17556774 | None:intergenic | 50.0% | |
| GGATCGGATTGAGGCGAAAT+TGG | + | chr6.4:17556618-17556637 | MS.gene41990:CDS | 50.0% | |
| GGGAACCACAAAGATAGGAG+TGG | - | chr6.4:17560596-17560615 | None:intergenic | 50.0% | |
| GTATCCATCAGTTTCGGCGA+AGG | - | chr6.4:17556874-17556893 | None:intergenic | 50.0% | |
| GTGCCCACCACTTCAAACAA+TGG | - | chr6.4:17557944-17557963 | None:intergenic | 50.0% | |
| GTGGATTCCGCTTCTAATGG+TGG | + | chr6.4:17556652-17556671 | MS.gene41990:CDS | 50.0% | |
| GTGGGCGTTCTCTTGTTCAT+TGG | + | chr6.4:17558638-17558657 | MS.gene41990:intron | 50.0% | |
| TAAAGCATATGCCTGGCCTG+CGG | - | chr6.4:17559783-17559802 | None:intergenic | 50.0% | |
| TACGGCACCTGAACCATATC+AGG | + | chr6.4:17558219-17558238 | MS.gene41990:CDS | 50.0% | |
| TCACTGCATATAGGAGTGGC+AGG | - | chr6.4:17558445-17558464 | None:intergenic | 50.0% | |
| TCCTCCAAAACCACCGGATT+GGG | + | chr6.4:17557173-17557192 | MS.gene41990:CDS | 50.0% | |
| TGAGGACAACCTTGAGGACA+AGG | + | chr6.4:17558735-17558754 | MS.gene41990:intron | 50.0% | |
| TGGATGGGTGACAGAGTCTT+CGG | - | chr6.4:17556908-17556927 | None:intergenic | 50.0% | |
| TGTCCTCAAGGTTGTCCTCA+AGG | - | chr6.4:17558735-17558754 | None:intergenic | 50.0% | |
| TGTTGCATTGAGGCCTTGGA+TGG | - | chr6.4:17556521-17556540 | None:intergenic | 50.0% | |
| TTACAAGTGGCAAGTGGCAC+TGG | + | chr6.4:17557809-17557828 | MS.gene41990:intron | 50.0% | |
| ! | ACAACCCAATCCGGTGGTTT+TGG | - | chr6.4:17557180-17557199 | None:intergenic | 50.0% |
| ! | CCATGGTTGATGCTTAGGGA+TGG | + | chr6.4:17559216-17559235 | MS.gene41990:intron | 50.0% |
| ! | GAGTGCCACTCCTATCTTTG+TGG | + | chr6.4:17560588-17560607 | MS.gene41990:CDS | 50.0% |
| ! | GCTTGCTGATAGAGTAAGCC+TGG | - | chr6.4:17557720-17557739 | None:intergenic | 50.0% |
| ! | GGCCCTATTGCTCTAGACTA+TGG | + | chr6.4:17557312-17557331 | MS.gene41990:CDS | 50.0% |
| ! | GGCCTTCTGAAAGCCTGATA+CGG | - | chr6.4:17559727-17559746 | None:intergenic | 50.0% |
| !! | GAGGCTTTTTGAGAGGCTTG+TGG | - | chr6.4:17559368-17559387 | None:intergenic | 50.0% |
| !! | TGGGAAGGGGCGTCAAAAAT+TGG | - | chr6.4:17557110-17557129 | None:intergenic | 50.0% |
| !! | TTGCATTAGCTTGCGAGGGT+GGG | + | chr6.4:17558500-17558519 | MS.gene41990:CDS | 50.0% |
| !! | TTTGCATTAGCTTGCGAGGG+TGG | + | chr6.4:17558499-17558518 | MS.gene41990:CDS | 50.0% |
| !! | TTTTTGAGAGGCTTGTGGCC+TGG | - | chr6.4:17559363-17559382 | None:intergenic | 50.0% |
| !!! | CTACTTTTTAGGCCCGAGTC+TGG | - | chr6.4:17559748-17559767 | None:intergenic | 50.0% |
| ACAGGCTAGTAGGCCGTATC+AGG | + | chr6.4:17559711-17559730 | MS.gene41990:intron | 55.0% | |
| AGCTGGACGACAACCCAATC+CGG | - | chr6.4:17557189-17557208 | None:intergenic | 55.0% | |
| AGGCAGAGTTTACCTGAGGC+GGG | + | chr6.4:17560096-17560115 | MS.gene41990:intron | 55.0% | |
| AGGCCAAGCTAGGCTTTGCA+GGG | - | chr6.4:17559832-17559851 | None:intergenic | 55.0% | |
| CATCCGGCGCAACATTAGAG+AGG | - | chr6.4:17561030-17561049 | None:intergenic | 55.0% | |
| CCTACGACTTAGCCTACGAC+AGG | + | chr6.4:17559265-17559284 | MS.gene41990:intron | 55.0% | |
| CCTGTCGTAGGCTAAGTCGT+AGG | - | chr6.4:17559268-17559287 | None:intergenic | 55.0% | |
| CTCAGCTTCCATCTCGCGTA+TGG | + | chr6.4:17556597-17556616 | MS.gene41990:CDS | 55.0% | |
| CTCCTCCAAAACCACCGGAT+TGG | + | chr6.4:17557172-17557191 | MS.gene41990:CDS | 55.0% | |
| CTCGCGTATGGATCGGATTG+AGG | + | chr6.4:17556609-17556628 | MS.gene41990:CDS | 55.0% | |
| CTTAGGGATGGGAATAGGCC+AGG | + | chr6.4:17559228-17559247 | MS.gene41990:intron | 55.0% | |
| GACTTAGCCTACGACAGGTC+AGG | + | chr6.4:17559270-17559289 | MS.gene41990:intron | 55.0% | |
| GAGCAAAAGAACGCCCACCA+AGG | - | chr6.4:17559988-17560007 | None:intergenic | 55.0% | |
| GCCAAGGATGTCGTGACATC+CGG | - | chr6.4:17561046-17561065 | None:intergenic | 55.0% | |
| GCCGGCCTAATAGGCTTAAG+AGG | - | chr6.4:17559387-17559406 | None:intergenic | 55.0% | |
| GCTTCCTTCGCCGAAACTGA+TGG | + | chr6.4:17556867-17556886 | MS.gene41990:CDS | 55.0% | |
| GCTTTCAGAAGGCCAGACTC+GGG | + | chr6.4:17559733-17559752 | MS.gene41990:intron | 55.0% | |
| GGAATAGGCTAGGCCAAGCT+AGG | - | chr6.4:17559842-17559861 | None:intergenic | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | + | chr6.4:17559722-17559741 | MS.gene41990:intron | 55.0% | |
| GGCTTTCAGAAGGCCAGACT+CGG | + | chr6.4:17559732-17559751 | MS.gene41990:intron | 55.0% | |
| GTGAGTTAACTCACGCTGGC+TGG | + | chr6.4:17560181-17560200 | MS.gene41990:intron | 55.0% | |
| TAGGCCAAGCTAGGCTTTGC+AGG | - | chr6.4:17559833-17559852 | None:intergenic | 55.0% | |
| TAGGCCAGGACGGCTTATAG+GGG | + | chr6.4:17559242-17559261 | MS.gene41990:intron | 55.0% | |
| TCAACCAATGGGATCCGGGT+GGG | + | chr6.4:17558620-17558639 | MS.gene41990:intron | 55.0% | |
| TCCACCTCCTCCAAAACCAC+CGG | + | chr6.4:17557167-17557186 | MS.gene41990:CDS | 55.0% | |
| TGAACAAGAGAACGCCCACC+CGG | - | chr6.4:17558637-17558656 | None:intergenic | 55.0% | |
| TTCAACCAATGGGATCCGGG+TGG | + | chr6.4:17558619-17558638 | MS.gene41990:intron | 55.0% | |
| ! | CGGGGTGGATATGGTGGAAA+TGG | + | chr6.4:17560115-17560134 | MS.gene41990:intron | 55.0% |
| ! | GCCCCCCTCTCCATTTTCAT+AGG | + | chr6.4:17559925-17559944 | MS.gene41990:intron | 55.0% |
| !!! | ACCCAATCCGGTGGTTTTGG+AGG | - | chr6.4:17557177-17557196 | None:intergenic | 55.0% |
| !!! | CAATCCGGTGGTTTTGGAGG+AGG | - | chr6.4:17557174-17557193 | None:intergenic | 55.0% |
| !!! | GTGGTTTTGGAGGAGGTGGA+GGG | - | chr6.4:17557167-17557186 | None:intergenic | 55.0% |
| ACAGCATGAACGACGGCAGC+TGG | - | chr6.4:17557206-17557225 | None:intergenic | 60.0% | |
| AGAGTTTACCTGAGGCGGGG+TGG | + | chr6.4:17560100-17560119 | MS.gene41990:intron | 60.0% | |
| AGGCCCTGCAAAGCCTAGCT+TGG | + | chr6.4:17559826-17559845 | MS.gene41990:intron | 60.0% | |
| GAGTTGGAGGCAGCCATCCA+AGG | + | chr6.4:17556505-17556524 | MS.gene41990:CDS | 60.0% | |
| GCCGGATGTCACGACATCCT+TGG | + | chr6.4:17561042-17561061 | MS.gene41990:CDS | 60.0% | |
| GCTGGAGCTAGCTCACCCTA+TGG | + | chr6.4:17558135-17558154 | MS.gene41990:CDS | 60.0% | |
| GGCAGAGTTTACCTGAGGCG+GGG | + | chr6.4:17560097-17560116 | MS.gene41990:intron | 60.0% | |
| GGGATGGGAATAGGCCAGGA+CGG | + | chr6.4:17559232-17559251 | MS.gene41990:intron | 60.0% | |
| TACCTGAGGCGGGGTGGATA+TGG | + | chr6.4:17560106-17560125 | MS.gene41990:intron | 60.0% | |
| TAGGCCCCTATAAGCCGTCC+TGG | - | chr6.4:17559249-17559268 | None:intergenic | 60.0% | |
| TAGGGTGAGCTAGCTCCAGC+AGG | - | chr6.4:17558135-17558154 | None:intergenic | 60.0% | |
| TGGACGACAACCCAATCCGG+TGG | - | chr6.4:17557186-17557205 | None:intergenic | 60.0% | |
| !!! | GGTGGTTTTGGAGGAGGTGG+AGG | - | chr6.4:17557168-17557187 | None:intergenic | 60.0% |
| !!! | TCCGGTGGTTTTGGAGGAGG+TGG | - | chr6.4:17557171-17557190 | None:intergenic | 60.0% |
| AACGCCCACCCGGATCCCAT+TGG | - | chr6.4:17558627-17558646 | None:intergenic | 65.0% | |
| AGCCTACGACAGGTCAGGCC+AGG | + | chr6.4:17559275-17559294 | MS.gene41990:intron | 65.0% | |
| CACCATATCCACCCCGCCTC+AGG | - | chr6.4:17560111-17560130 | None:intergenic | 65.0% | |
| CTGAGGCGGGGTGGATATGG+TGG | + | chr6.4:17560109-17560128 | MS.gene41990:intron | 65.0% | |
| GGCTTTGCAGGGCCTAAGCC+TGG | - | chr6.4:17559821-17559840 | None:intergenic | 65.0% | |
| GTAGGCCTATGACAGGCCGC+AGG | + | chr6.4:17559764-17559783 | MS.gene41990:intron | 65.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | + | chr6.4:17559769-17559788 | MS.gene41990:intron | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | - | chr6.4:17559772-17559791 | None:intergenic | 70.0% | |
| GGCCTGGCCTGACCTGTCGT+AGG | - | chr6.4:17559280-17559299 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 17556478 | 17561525 | 17556478 | ID=MS.gene41990 |
| chr6.4 | mRNA | 17556478 | 17561525 | 17556478 | ID=MS.gene41990.t1;Parent=MS.gene41990 |
| chr6.4 | exon | 17556478 | 17557194 | 17556478 | ID=MS.gene41990.t1.exon1;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17556478 | 17557194 | 17556478 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| chr6.4 | exon | 17557276 | 17557363 | 17557276 | ID=MS.gene41990.t1.exon2;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17557276 | 17557363 | 17557276 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| chr6.4 | exon | 17557495 | 17557646 | 17557495 | ID=MS.gene41990.t1.exon3;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17557495 | 17557646 | 17557495 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| chr6.4 | exon | 17557721 | 17557745 | 17557721 | ID=MS.gene41990.t1.exon4;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17557721 | 17557745 | 17557721 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| chr6.4 | exon | 17557816 | 17558583 | 17557816 | ID=MS.gene41990.t1.exon5;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17557816 | 17558583 | 17557816 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| chr6.4 | exon | 17560539 | 17560678 | 17560539 | ID=MS.gene41990.t1.exon6;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17560539 | 17560678 | 17560539 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| chr6.4 | exon | 17561016 | 17561525 | 17561016 | ID=MS.gene41990.t1.exon7;Parent=MS.gene41990.t1 |
| chr6.4 | CDS | 17561016 | 17561525 | 17561016 | ID=cds.MS.gene41990.t1;Parent=MS.gene41990.t1 |
| Gene Sequence |
| Protein sequence |
