Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46262.t1 | XP_003602047.1 | 100 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 1.00E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46262.t1 | Q9FXM3 | 80.3 | 340 | 66 | 1 | 1 | 340 | 1 | 339 | 9.6e-157 | 554.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46262.t1 | B7FK39 | 100.0 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 7.2e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46262.t1 | MTR_3g088380 | 100.000 | 339 | 0 | 0 | 1 | 339 | 1 | 339 | 0.0 | 702 |
| MS.gene46262.t1 | MTR_4g102860 | 39.557 | 316 | 181 | 4 | 10 | 325 | 16 | 321 | 1.24e-69 | 221 |
| MS.gene46262.t1 | MTR_3g088120 | 47.368 | 209 | 104 | 2 | 11 | 219 | 34 | 236 | 1.81e-64 | 206 |
| MS.gene46262.t1 | MTR_3g088120 | 47.368 | 209 | 104 | 2 | 11 | 219 | 34 | 236 | 1.05e-63 | 206 |
| MS.gene46262.t1 | MTR_6g027590 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 1.05e-32 | 125 |
| MS.gene46262.t1 | MTR_6g471010 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 2.03e-32 | 124 |
| MS.gene46262.t1 | MTR_3g118160 | 27.059 | 255 | 147 | 11 | 11 | 234 | 422 | 668 | 1.81e-15 | 77.8 |
| MS.gene46262.t1 | MTR_4g104350 | 23.922 | 255 | 173 | 5 | 1 | 240 | 270 | 518 | 6.26e-14 | 73.2 |
| MS.gene46262.t1 | MTR_4g104350 | 23.922 | 255 | 173 | 5 | 1 | 240 | 270 | 518 | 6.67e-14 | 73.2 |
| MS.gene46262.t1 | MTR_4g102700 | 46.377 | 69 | 37 | 0 | 127 | 195 | 1 | 69 | 7.74e-13 | 65.9 |
| MS.gene46262.t1 | MTR_5g020810 | 23.707 | 232 | 150 | 5 | 9 | 219 | 412 | 637 | 3.64e-11 | 64.7 |
| MS.gene46262.t1 | MTR_4g134530 | 23.810 | 294 | 197 | 5 | 13 | 287 | 429 | 714 | 4.88e-11 | 64.7 |
| MS.gene46262.t1 | MTR_5g098850 | 25.430 | 291 | 173 | 10 | 6 | 269 | 111 | 384 | 6.77e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46262.t1 | AT1G21690 | 79.351 | 339 | 69 | 1 | 1 | 338 | 1 | 339 | 0.0 | 572 |
| MS.gene46262.t1 | AT1G21690 | 77.286 | 339 | 69 | 2 | 1 | 338 | 1 | 332 | 0.0 | 551 |
| MS.gene46262.t1 | AT1G21690 | 76.696 | 339 | 66 | 2 | 1 | 338 | 1 | 327 | 0.0 | 545 |
| MS.gene46262.t1 | AT1G21690 | 77.607 | 326 | 68 | 3 | 1 | 321 | 1 | 326 | 0.0 | 534 |
| MS.gene46262.t1 | AT1G63160 | 39.024 | 328 | 184 | 5 | 9 | 330 | 15 | 332 | 5.90e-68 | 216 |
| MS.gene46262.t1 | AT1G77470 | 46.479 | 213 | 101 | 3 | 10 | 219 | 40 | 242 | 3.36e-63 | 205 |
| MS.gene46262.t1 | AT5G27740 | 31.799 | 239 | 126 | 4 | 11 | 219 | 3 | 234 | 3.77e-32 | 123 |
| MS.gene46262.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 3.82e-15 | 77.0 |
| MS.gene46262.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 3.82e-15 | 77.0 |
| MS.gene46262.t1 | AT5G45720 | 24.653 | 288 | 204 | 5 | 9 | 287 | 343 | 626 | 4.43e-15 | 77.0 |
| MS.gene46262.t1 | AT5G45720 | 24.653 | 288 | 204 | 5 | 9 | 287 | 343 | 626 | 4.57e-15 | 77.0 |
| MS.gene46262.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene46262.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene46262.t1 | AT4G24790 | 25.714 | 245 | 157 | 7 | 13 | 240 | 243 | 479 | 4.63e-15 | 76.6 |
| MS.gene46262.t1 | AT5G22010 | 25.600 | 250 | 140 | 8 | 4 | 218 | 335 | 573 | 8.46e-15 | 76.3 |
| MS.gene46262.t1 | AT5G22010 | 25.600 | 250 | 140 | 8 | 4 | 218 | 335 | 573 | 8.89e-15 | 75.9 |
| MS.gene46262.t1 | AT2G02480 | 25.984 | 254 | 160 | 7 | 6 | 240 | 446 | 690 | 1.58e-13 | 72.4 |
| MS.gene46262.t1 | AT2G02480 | 25.984 | 254 | 160 | 7 | 6 | 240 | 446 | 690 | 1.58e-13 | 72.4 |
| MS.gene46262.t1 | AT1G14460 | 25.329 | 304 | 194 | 8 | 6 | 287 | 419 | 711 | 2.68e-13 | 71.6 |
| MS.gene46262.t1 | AT1G24290 | 24.444 | 270 | 176 | 8 | 9 | 269 | 101 | 351 | 4.47e-11 | 64.3 |
Find 84 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATACTTCTTAGGCTTAT+TGG | 0.122606 | 3.1:+71290236 | None:intergenic |
| CAGTCTGCGGCTCGCTTATT+TGG | 0.138170 | 3.1:-71288127 | MS.gene46262:CDS |
| CTTCAAGGTGTGCAAAATTC+AGG | 0.235497 | 3.1:-71289461 | MS.gene46262:CDS |
| TCACAATTCACATACTTCTT+AGG | 0.237994 | 3.1:+71290228 | None:intergenic |
| GCTCTATAAATCTAGGGTTT+TGG | 0.296629 | 3.1:-71290337 | MS.gene46262:CDS |
| AAGGATCTGATTTCTGTGTC+TGG | 0.304999 | 3.1:-71288088 | MS.gene46262:CDS |
| CTTTGCAGATGTATACTATT+CGG | 0.322240 | 3.1:+71289406 | None:intergenic |
| GTACTCGAACTACTTCTTCT+TGG | 0.343225 | 3.1:+71290573 | None:intergenic |
| TCCAGAACAATTATCTTATA+CGG | 0.355355 | 3.1:+71290102 | None:intergenic |
| GAATGAATTACTTACGCTTC+CGG | 0.359559 | 3.1:+71290532 | None:intergenic |
| AATCAGATCCTTGGAAGAAA+TGG | 0.365273 | 3.1:+71288099 | None:intergenic |
| CCCTCGTAAGCAAATCCTTC+TGG | 0.371183 | 3.1:+71286599 | None:intergenic |
| TACTTACGCTTCCGGTTTCG+AGG | 0.379428 | 3.1:+71290540 | None:intergenic |
| GCTACGTCTTTCACTTGCTT+TGG | 0.383156 | 3.1:+71290599 | None:intergenic |
| TCGGGCTATAACATACTTGC+AGG | 0.386432 | 3.1:-71289199 | MS.gene46262:intron |
| TTCTATGGTCCTCCCGGCAC+TGG | 0.398862 | 3.1:-71290408 | MS.gene46262:CDS |
| GCCCTGAGCTCTATAAATCT+AGG | 0.401836 | 3.1:-71290344 | MS.gene46262:CDS |
| TGCCCACACATGCTCTTCTA+TGG | 0.405641 | 3.1:-71290423 | MS.gene46262:CDS |
| ACCGTATAAGATAATTGTTC+TGG | 0.408822 | 3.1:-71290103 | MS.gene46262:CDS |
| ACCCTAGATTTATAGAGCTC+AGG | 0.441177 | 3.1:+71290342 | None:intergenic |
| AGGATCTGATTTCTGTGTCT+GGG | 0.443180 | 3.1:-71288087 | MS.gene46262:CDS |
| TTATATGCAACTACATTAGC+AGG | 0.448705 | 3.1:-71289917 | MS.gene46262:intron |
| ATCGCGGTATTAACGTTGTT+CGG | 0.450811 | 3.1:-71290296 | MS.gene46262:CDS |
| CTCACCAACACCCTCGAAAC+CGG | 0.458137 | 3.1:-71290551 | MS.gene46262:CDS |
| TTATAGAACCACTTGCTTCA+AGG | 0.458269 | 3.1:-71289476 | MS.gene46262:CDS |
| CGTCTTTCACTTGCTTTGGA+CGG | 0.461616 | 3.1:+71290603 | None:intergenic |
| CTCATGATTTCTTCTGTCAG+TGG | 0.463158 | 3.1:+71289432 | None:intergenic |
| GGCAAGAATATCCAAGAAGC+TGG | 0.470657 | 3.1:-71287281 | MS.gene46262:CDS |
| GGTTGAGTGCTCTGAATGAT+TGG | 0.473772 | 3.1:+71290738 | None:intergenic |
| AAACTTACTCTAAAGTTACT+AGG | 0.480746 | 3.1:-71289947 | MS.gene46262:CDS |
| TGGATCTTCCATTTCTTCCA+AGG | 0.489878 | 3.1:-71288107 | MS.gene46262:CDS |
| AGACACAGAAATCAGATCCT+TGG | 0.500862 | 3.1:+71288090 | None:intergenic |
| CCCTAGATTTATAGAGCTCA+GGG | 0.505126 | 3.1:+71290343 | None:intergenic |
| TGAGTTAGCATCTGAGAGAC+TGG | 0.506538 | 3.1:+71287448 | None:intergenic |
| GATTTCGCTGCTGTCGCTGT+CGG | 0.516035 | 3.1:-71290261 | MS.gene46262:CDS |
| AAAGCTGATGGGCGATAGCA+AGG | 0.528626 | 3.1:+71290370 | None:intergenic |
| TTCTCAAGGAGATCTTCGTC+GGG | 0.532165 | 3.1:-71289217 | MS.gene46262:CDS |
| CCCTGAGCTCTATAAATCTA+GGG | 0.532759 | 3.1:-71290343 | MS.gene46262:CDS |
| GTCAACAATTTCATTGCAGA+GGG | 0.534353 | 3.1:-71287475 | MS.gene46262:CDS |
| GAATTGCAGTGCCTAGTTGA+TGG | 0.534378 | 3.1:-71286686 | MS.gene46262:intron |
| GTATACATCTGCAAAGAAGA+AGG | 0.535887 | 3.1:-71289399 | MS.gene46262:CDS |
| GCTCAGGGCCGAAAAGCTGA+TGG | 0.537149 | 3.1:+71290358 | None:intergenic |
| TAAGATAATTGTTCTGGATG+AGG | 0.538029 | 3.1:-71290097 | MS.gene46262:CDS |
| GGTTACTATTTCTCGACCCA+TGG | 0.542200 | 3.1:+71290717 | None:intergenic |
| TTTCTCAAGGAGATCTTCGT+CGG | 0.544188 | 3.1:-71289218 | MS.gene46262:CDS |
| ACTTTAAGTAATATTTCTCA+AGG | 0.547470 | 3.1:-71289231 | MS.gene46262:CDS |
| GCAAGAATATCCAAGAAGCT+GGG | 0.552008 | 3.1:-71287280 | MS.gene46262:CDS |
| ACTTACGCTTCCGGTTTCGA+GGG | 0.555639 | 3.1:+71290541 | None:intergenic |
| AGTGCCTCAACAACCTCCGC+TGG | 0.556568 | 3.1:+71287544 | None:intergenic |
| TGTTCCAGCGGAGGTTGTTG+AGG | 0.557324 | 3.1:-71287548 | MS.gene46262:CDS |
| CTTCTTAAAGCATGCAGAAG+TGG | 0.558722 | 3.1:-71287523 | MS.gene46262:CDS |
| GGCGATAGCAAGGGCAGTAG+TGG | 0.560027 | 3.1:+71290380 | None:intergenic |
| TTCAATGACAGAAGATGCCC+AGG | 0.563950 | 3.1:-71290070 | MS.gene46262:intron |
| CTCAGGGCCGAAAAGCTGAT+GGG | 0.565586 | 3.1:+71290359 | None:intergenic |
| GGACCATAGAAGAGCATGTG+TGG | 0.572859 | 3.1:+71290420 | None:intergenic |
| GCTTCCGGTTTCGAGGGTGT+TGG | 0.575401 | 3.1:+71290547 | None:intergenic |
| ATTCATCAGCACCATCAACT+AGG | 0.577021 | 3.1:+71286675 | None:intergenic |
| CGACATATCAGATGAGCAGA+AGG | 0.579308 | 3.1:-71287302 | MS.gene46262:CDS |
| TTTGCACACCTTGAAGCAAG+TGG | 0.582075 | 3.1:+71289468 | None:intergenic |
| TTTGGTTACAGAATGCACTA+AGG | 0.585073 | 3.1:-71289980 | MS.gene46262:intron |
| CATTCAGAGCACTCAACCAT+GGG | 0.590157 | 3.1:-71290733 | MS.gene46262:CDS |
| AGTCAACAATTTCATTGCAG+AGG | 0.595219 | 3.1:-71287476 | MS.gene46262:CDS |
| AGGTTCCTACCTCAGCATCA+AGG | 0.596936 | 3.1:+71289370 | None:intergenic |
| CCAGAAGGATTTGCTTACGA+GGG | 0.598134 | 3.1:-71286599 | MS.gene46262:CDS |
| AAACCAGATTGTTCCAGCGG+AGG | 0.598887 | 3.1:-71287557 | MS.gene46262:intron |
| ATGCTCTTCTATGGTCCTCC+CGG | 0.603856 | 3.1:-71290414 | MS.gene46262:CDS |
| TCATTCAGAGCACTCAACCA+TGG | 0.605871 | 3.1:-71290734 | MS.gene46262:CDS |
| CAAGAATATCCAAGAAGCTG+GGG | 0.606115 | 3.1:-71287279 | MS.gene46262:CDS |
| ATTATCTTATACGGTGGACA+CGG | 0.615926 | 3.1:+71290111 | None:intergenic |
| GGATCTGATTTCTGTGTCTG+GGG | 0.616871 | 3.1:-71288086 | MS.gene46262:intron |
| GCTTTATGTAACATGCCAGA+AGG | 0.617481 | 3.1:-71286614 | MS.gene46262:CDS |
| AGGAATCTACCTTGATGCTG+AGG | 0.617847 | 3.1:-71289379 | MS.gene46262:intron |
| AGAACAATTATCTTATACGG+TGG | 0.619264 | 3.1:+71290105 | None:intergenic |
| AGTCTCTCAGATGCTAACTC+AGG | 0.621124 | 3.1:-71287446 | MS.gene46262:intron |
| GCCAGAAGGATTTGCTTACG+AGG | 0.622388 | 3.1:-71286600 | MS.gene46262:CDS |
| AAGCTGATGGGCGATAGCAA+GGG | 0.629781 | 3.1:+71290371 | None:intergenic |
| TTGAAACCAGATTGTTCCAG+CGG | 0.632187 | 3.1:-71287560 | MS.gene46262:intron |
| ATACTTGCAGCTTCTTGATG+TGG | 0.635384 | 3.1:-71286654 | MS.gene46262:CDS |
| GAATGCACTAAGGCGGACGA+TGG | 0.637676 | 3.1:-71289970 | MS.gene46262:CDS |
| GACCATAGAAGAGCATGTGT+GGG | 0.648975 | 3.1:+71290421 | None:intergenic |
| GGTTACAGAATGCACTAAGG+CGG | 0.673205 | 3.1:-71289977 | MS.gene46262:intron |
| AAGAATATCCAAGAAGCTGG+GGG | 0.689443 | 3.1:-71287278 | MS.gene46262:CDS |
| CTTAATGCTAGTGATGATCG+CGG | 0.706726 | 3.1:-71290312 | MS.gene46262:CDS |
| TCAACAATTTCATTGCAGAG+GGG | 0.739196 | 3.1:-71287474 | MS.gene46262:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTTAAAATATATAAA+AGG | - | chr3.1:71290225-71290244 | MS.gene46262:intron | 0.0% |
| !! | AAATTATATATTAATTGAAC+AGG | + | chr3.1:71287325-71287344 | None:intergenic | 10.0% |
| !! | AACTTAATTTATTAAAACAA+TGG | + | chr3.1:71287627-71287646 | None:intergenic | 10.0% |
| !!! | ATTTAGTATTTTAAAAAATC+AGG | + | chr3.1:71289499-71289518 | None:intergenic | 10.0% |
| !!! | ATTTTAATGATAATATTACA+CGG | - | chr3.1:71288244-71288263 | MS.gene46262:intron | 10.0% |
| !!! | TTTTTAAAATACTAAATACA+TGG | - | chr3.1:71289502-71289521 | MS.gene46262:intron | 10.0% |
| !! | AAACTAAATTTCAACATAAA+TGG | - | chr3.1:71290471-71290490 | MS.gene46262:intron | 15.0% |
| !! | AAGAAAAAAAAATCAGTAAA+TGG | + | chr3.1:71287467-71287486 | None:intergenic | 15.0% |
| !! | TACAGAAATCTTATAAAAAA+GGG | + | chr3.1:71287172-71287191 | None:intergenic | 15.0% |
| !! | TTACAGAAATCTTATAAAAA+AGG | + | chr3.1:71287173-71287192 | None:intergenic | 15.0% |
| !!! | AATAAAACTCAAAAGTATAT+TGG | + | chr3.1:71287140-71287159 | None:intergenic | 15.0% |
| !!! | AGGAATAGTTTTTATTATAT+TGG | - | chr3.1:71290540-71290559 | MS.gene46262:intron | 15.0% |
| !!! | GGAATAGTTTTTATTATATT+GGG | - | chr3.1:71290541-71290560 | MS.gene46262:intron | 15.0% |
| !!! | TCTTTTATAATATTTTCGAA+AGG | + | chr3.1:71288893-71288912 | None:intergenic | 15.0% |
| !! | AAATAAATTCAATTGCAAGA+TGG | - | chr3.1:71288686-71288705 | MS.gene46262:intron | 20.0% |
| !! | AAATATCATGATCAATACAA+AGG | - | chr3.1:71287722-71287741 | MS.gene46262:intron | 20.0% |
| !! | AATCTTATAAAAAAGGGAAA+AGG | + | chr3.1:71287166-71287185 | None:intergenic | 20.0% |
| !! | AATTGAAATTGAAATTGGAA+TGG | + | chr3.1:71286657-71286676 | None:intergenic | 20.0% |
| !! | ACAATCTTAGTGATAATAAA+GGG | - | chr3.1:71289039-71289058 | MS.gene46262:intron | 20.0% |
| !! | ACAGAAAAAGATGATTATTA+AGG | + | chr3.1:71288815-71288834 | None:intergenic | 20.0% |
| !! | ACTTTAAGTAATATTTCTCA+AGG | - | chr3.1:71288108-71288127 | MS.gene46262:CDS | 20.0% |
| !! | ATACATTATTCAAAGTGAAA+TGG | + | chr3.1:71288315-71288334 | None:intergenic | 20.0% |
| !! | ATTGGAATTGAAATTGAAAT+TGG | + | chr3.1:71286662-71286681 | None:intergenic | 20.0% |
| !! | CATTTGTAATTTCTCTAAAT+AGG | + | chr3.1:71290361-71290380 | None:intergenic | 20.0% |
| !! | CTATTTAGAGAAATTACAAA+TGG | - | chr3.1:71290359-71290378 | MS.gene46262:CDS | 20.0% |
| !! | TGTACTTCAGTTTAATATAT+AGG | - | chr3.1:71290401-71290420 | MS.gene46262:CDS | 20.0% |
| !!! | ACAAATTAGTTTTTAATGCA+AGG | + | chr3.1:71288951-71288970 | None:intergenic | 20.0% |
| !!! | ATTTCTGTAACTTATGTTTT+GGG | - | chr3.1:71287183-71287202 | MS.gene46262:intron | 20.0% |
| !!! | TAATTTTGATTTAGCAAACA+AGG | - | chr3.1:71289839-71289858 | MS.gene46262:intron | 20.0% |
| !!! | TGCATTAAAAACTAATTTGT+TGG | - | chr3.1:71288951-71288970 | MS.gene46262:intron | 20.0% |
| !!! | TTATAATATTTTCGAAAGGA+AGG | + | chr3.1:71288889-71288908 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTCACATTCTTA+AGG | - | chr3.1:71287492-71287511 | MS.gene46262:CDS | 20.0% |
| ! | AAATCAGAGAAACAGAAAAT+TGG | + | chr3.1:71286680-71286699 | None:intergenic | 25.0% |
| ! | AATGAATTAGGAAGAAAAGA+GGG | + | chr3.1:71286853-71286872 | None:intergenic | 25.0% |
| ! | AGACTGAAAATGTTAATACT+GGG | + | chr3.1:71289198-71289217 | None:intergenic | 25.0% |
| ! | AGTTCATATGTGCTATAAAT+GGG | - | chr3.1:71288608-71288627 | MS.gene46262:intron | 25.0% |
| ! | ATAATTATTAGCTGTATGGA+AGG | - | chr3.1:71289428-71289447 | MS.gene46262:CDS | 25.0% |
| ! | CTTTGATATAAAAACAGAAC+AGG | + | chr3.1:71289304-71289323 | None:intergenic | 25.0% |
| ! | GAATTGTAACCAACTTAATT+AGG | + | chr3.1:71290617-71290636 | None:intergenic | 25.0% |
| ! | GACAATCTTAGTGATAATAA+AGG | - | chr3.1:71289038-71289057 | MS.gene46262:intron | 25.0% |
| ! | GTCTTGATTTAATTATGTAG+TGG | + | chr3.1:71289021-71289040 | None:intergenic | 25.0% |
| ! | TATGTGCAACTTAAAATACT+TGG | + | chr3.1:71290207-71290226 | None:intergenic | 25.0% |
| ! | TCCAGAACAATTATCTTATA+CGG | + | chr3.1:71287240-71287259 | None:intergenic | 25.0% |
| ! | TGACATAATTATTAGCTGTA+TGG | - | chr3.1:71289424-71289443 | MS.gene46262:CDS | 25.0% |
| ! | TTAGTATATTTGCATCTGTA+GGG | - | chr3.1:71288078-71288097 | MS.gene46262:intron | 25.0% |
| ! | TTTAGTATATTTGCATCTGT+AGG | - | chr3.1:71288077-71288096 | MS.gene46262:intron | 25.0% |
| !! | GATTTCTGTAACTTATGTTT+TGG | - | chr3.1:71287182-71287201 | MS.gene46262:intron | 25.0% |
| !!! | AAACTTACTCTAAAGTTACT+AGG | - | chr3.1:71287392-71287411 | MS.gene46262:intron | 25.0% |
| !!! | AAGCAACACACTTTTTTAAT+AGG | + | chr3.1:71288222-71288241 | None:intergenic | 25.0% |
| !!! | TATATGTCCATTTTTCTGTA+TGG | - | chr3.1:71289351-71289370 | MS.gene46262:intron | 25.0% |
| !!! | TTTCAAGATTTTAGAAAGTC+AGG | + | chr3.1:71289765-71289784 | None:intergenic | 25.0% |
| AAAAACAGAGAAAACATACC+TGG | + | chr3.1:71287290-71287309 | None:intergenic | 30.0% | |
| AAAACAGAGAAAACATACCT+GGG | + | chr3.1:71287289-71287308 | None:intergenic | 30.0% | |
| AAATTGGAATGGAGATAAAG+TGG | + | chr3.1:71286646-71286665 | None:intergenic | 30.0% | |
| AACAATACCTCTACAAACAA+TGG | + | chr3.1:71288037-71288056 | None:intergenic | 30.0% | |
| AACATAAATGGCCCTATATA+TGG | - | chr3.1:71290483-71290502 | MS.gene46262:intron | 30.0% | |
| AAGGTTACTTATGATCCTTT+AGG | - | chr3.1:71290092-71290111 | MS.gene46262:CDS | 30.0% | |
| AATGAAAACCATGTACATCA+AGG | + | chr3.1:71287539-71287558 | None:intergenic | 30.0% | |
| AATTAAACGATTGTCAACAC+CGG | + | chr3.1:71288506-71288525 | None:intergenic | 30.0% | |
| ACATAAATGGCCCTATATAT+GGG | - | chr3.1:71290484-71290503 | MS.gene46262:intron | 30.0% | |
| ACATTGTAAAAGCCTTAGTT+TGG | + | chr3.1:71289970-71289989 | None:intergenic | 30.0% | |
| ACCGTATAAGATAATTGTTC+TGG | - | chr3.1:71287236-71287255 | MS.gene46262:intron | 30.0% | |
| AGAACAATTATCTTATACGG+TGG | + | chr3.1:71287237-71287256 | None:intergenic | 30.0% | |
| AGAGTTCGTACATACATATT+GGG | - | chr3.1:71288717-71288736 | MS.gene46262:intron | 30.0% | |
| AGCAAGAATAGATAACACAT+AGG | + | chr3.1:71289643-71289662 | None:intergenic | 30.0% | |
| AGGTAAAAGCAAAATCTACA+TGG | + | chr3.1:71288931-71288950 | None:intergenic | 30.0% | |
| ATGAATTAGGAAGAAAAGAG+GGG | + | chr3.1:71286852-71286871 | None:intergenic | 30.0% | |
| ATTGAGAATAGGGAATACAT+TGG | - | chr3.1:71287809-71287828 | MS.gene46262:intron | 30.0% | |
| CAGACTGAAAATGTTAATAC+TGG | + | chr3.1:71289199-71289218 | None:intergenic | 30.0% | |
| CGAAGACAAAAAAAGAATGA+GGG | + | chr3.1:71288541-71288560 | None:intergenic | 30.0% | |
| CTACAGAGATAAACAAAAGA+AGG | + | chr3.1:71290570-71290589 | None:intergenic | 30.0% | |
| CTTTGCAGATGTATACTATT+CGG | + | chr3.1:71287936-71287955 | None:intergenic | 30.0% | |
| GAAGACATACTATGTTGATA+AGG | + | chr3.1:71288177-71288196 | None:intergenic | 30.0% | |
| GAATGAATTAGGAAGAAAAG+AGG | + | chr3.1:71286854-71286873 | None:intergenic | 30.0% | |
| GAGTTCATATGTGCTATAAA+TGG | - | chr3.1:71288607-71288626 | MS.gene46262:intron | 30.0% | |
| GATTATAAGTGACTAATGTC+TGG | - | chr3.1:71290444-71290463 | MS.gene46262:intron | 30.0% | |
| GGTTCAATAATTAAAGCCAA+TGG | - | chr3.1:71288567-71288586 | MS.gene46262:intron | 30.0% | |
| GTAGAATAGATCTGTAATAC+AGG | - | chr3.1:71288844-71288863 | MS.gene46262:intron | 30.0% | |
| GTGAGTATGTTAATTCCTAA+AGG | + | chr3.1:71290110-71290129 | None:intergenic | 30.0% | |
| TAGTATATTTGCATCTGTAG+GGG | - | chr3.1:71288079-71288098 | MS.gene46262:intron | 30.0% | |
| TCACAATTCACATACTTCTT+AGG | + | chr3.1:71287114-71287133 | None:intergenic | 30.0% | |
| TCAGCACTTTATTGAGAATA+GGG | - | chr3.1:71287799-71287818 | MS.gene46262:intron | 30.0% | |
| TCGAAGACAAAAAAAGAATG+AGG | + | chr3.1:71288542-71288561 | None:intergenic | 30.0% | |
| TCTTAAACATACCAAAGCAT+TGG | + | chr3.1:71287577-71287596 | None:intergenic | 30.0% | |
| TGATATAAAAACAGAACAGG+CGG | + | chr3.1:71289301-71289320 | None:intergenic | 30.0% | |
| TTATATGCAACTACATTAGC+AGG | - | chr3.1:71287422-71287441 | MS.gene46262:intron | 30.0% | |
| ! | CATCTTTTTCTGTTAACACT+TGG | - | chr3.1:71288822-71288841 | MS.gene46262:intron | 30.0% |
| ! | GTATTAACATTTTCAGTCTG+CGG | - | chr3.1:71289199-71289218 | MS.gene46262:intron | 30.0% |
| ! | TAAGATAATTGTTCTGGATG+AGG | - | chr3.1:71287242-71287261 | MS.gene46262:intron | 30.0% |
| ! | TTGATTTTTGTCCAATGCTT+TGG | - | chr3.1:71287563-71287582 | MS.gene46262:intron | 30.0% |
| ! | TTTTGATCCATTGTTTGTAG+AGG | - | chr3.1:71288027-71288046 | MS.gene46262:intron | 30.0% |
| !! | AACTAATTTGTTGGCATAAG+TGG | - | chr3.1:71288960-71288979 | MS.gene46262:intron | 30.0% |
| !! | CTTCTTTTGTTTATCTCTGT+AGG | - | chr3.1:71290568-71290587 | MS.gene46262:CDS | 30.0% |
| !! | TGTTGATAATGCTACATGTT+AGG | - | chr3.1:71288428-71288447 | MS.gene46262:intron | 30.0% |
| !!! | CAAGATTGTCGTTTTTTTGT+AGG | - | chr3.1:71287839-71287858 | MS.gene46262:intron | 30.0% |
| AAAGAAGTTCCAGATGAAAC+TGG | + | chr3.1:71289929-71289948 | None:intergenic | 35.0% | |
| AAATGGGAGAGTTCAATTGT+AGG | - | chr3.1:71288624-71288643 | MS.gene46262:intron | 35.0% | |
| AATCAGATCCTTGGAAGAAA+TGG | + | chr3.1:71289243-71289262 | None:intergenic | 35.0% | |
| AATCAGTACAAACTTCGTGA+AGG | + | chr3.1:71289093-71289112 | None:intergenic | 35.0% | |
| AGAAATTACAAATGGCACTC+AGG | - | chr3.1:71290367-71290386 | MS.gene46262:CDS | 35.0% | |
| AGATGCAATACTCAAAAGCT+TGG | + | chr3.1:71289142-71289161 | None:intergenic | 35.0% | |
| AGTCAACAATTTCATTGCAG+AGG | - | chr3.1:71289863-71289882 | MS.gene46262:intron | 35.0% | |
| ATTATCTTATACGGTGGACA+CGG | + | chr3.1:71287231-71287250 | None:intergenic | 35.0% | |
| CACATACTTCTTAGGCTTAT+TGG | + | chr3.1:71287106-71287125 | None:intergenic | 35.0% | |
| CAGCTAAATGTGCAAGAATA+TGG | + | chr3.1:71289671-71289690 | None:intergenic | 35.0% | |
| CATAACTAGCAATATTCTCG+TGG | - | chr3.1:71290175-71290194 | MS.gene46262:intron | 35.0% | |
| CTTATGCTTAAAATGGGAGT+TGG | - | chr3.1:71288752-71288771 | MS.gene46262:intron | 35.0% | |
| GAATGAATTACTTACGCTTC+CGG | + | chr3.1:71286810-71286829 | None:intergenic | 35.0% | |
| GAGAGTTCGTACATACATAT+TGG | - | chr3.1:71288716-71288735 | MS.gene46262:intron | 35.0% | |
| GCAAACACCATACAGAAAAA+TGG | + | chr3.1:71289361-71289380 | None:intergenic | 35.0% | |
| GGGTTGCTTATGCTTAAAAT+GGG | - | chr3.1:71288746-71288765 | MS.gene46262:intron | 35.0% | |
| GTATACATCTGCAAAGAAGA+AGG | - | chr3.1:71287940-71287959 | MS.gene46262:intron | 35.0% | |
| GTCAACAATTTCATTGCAGA+GGG | - | chr3.1:71289864-71289883 | MS.gene46262:intron | 35.0% | |
| GTCAGCACTTTATTGAGAAT+AGG | - | chr3.1:71287798-71287817 | MS.gene46262:intron | 35.0% | |
| TAATCGTGCTTACCAAACTA+AGG | - | chr3.1:71289955-71289974 | MS.gene46262:CDS | 35.0% | |
| TAGGAACCTTAGAGCTTATA+TGG | - | chr3.1:71287983-71288002 | MS.gene46262:intron | 35.0% | |
| TCAACAATTTCATTGCAGAG+GGG | - | chr3.1:71289865-71289884 | MS.gene46262:intron | 35.0% | |
| TCAATTGCAAGATGGTGAAT+TGG | - | chr3.1:71288694-71288713 | MS.gene46262:intron | 35.0% | |
| TGTGAAACTAACTACCACTA+GGG | - | chr3.1:71288393-71288412 | MS.gene46262:intron | 35.0% | |
| TGTGTGTTGAGGAATGAATT+AGG | + | chr3.1:71286865-71286884 | None:intergenic | 35.0% | |
| TTATAGAACCACTTGCTTCA+AGG | - | chr3.1:71287863-71287882 | MS.gene46262:intron | 35.0% | |
| TTCGGTTTCACCCATATATA+GGG | + | chr3.1:71290497-71290516 | None:intergenic | 35.0% | |
| TTGAAAGCGACAAGTGATTT+CGG | + | chr3.1:71290515-71290534 | None:intergenic | 35.0% | |
| TTGGGTTTCTGATATTTCAG+TGG | - | chr3.1:71287201-71287220 | MS.gene46262:intron | 35.0% | |
| TTGTGAAACTAACTACCACT+AGG | - | chr3.1:71288392-71288411 | MS.gene46262:intron | 35.0% | |
| TTTAGAAAGTCAGGAAAAGC+AGG | + | chr3.1:71289756-71289775 | None:intergenic | 35.0% | |
| TTTAGTCACCTTGATGTACA+TGG | - | chr3.1:71287528-71287547 | MS.gene46262:CDS | 35.0% | |
| TTTCGGTTTCACCCATATAT+AGG | + | chr3.1:71290498-71290517 | None:intergenic | 35.0% | |
| TTTGGTTACAGAATGCACTA+AGG | - | chr3.1:71287359-71287378 | MS.gene46262:intron | 35.0% | |
| ! | AGGTATTGTTGACATCATAG+CGG | - | chr3.1:71288047-71288066 | MS.gene46262:intron | 35.0% |
| ! | CAATTCTTACTTGTTGCTTG+TGG | - | chr3.1:71290631-71290650 | MS.gene46262:intron | 35.0% |
| ! | GATAACACATAGGAAGCATA+AGG | + | chr3.1:71289633-71289652 | None:intergenic | 35.0% |
| ! | TACATACATATTGGGCTAGA+GGG | - | chr3.1:71288725-71288744 | MS.gene46262:intron | 35.0% |
| ! | TCTTTTCCTTCAGTTGTTTG+AGG | - | chr3.1:71289998-71290017 | MS.gene46262:intron | 35.0% |
| !! | AAAGTGCTGACAAGAACAAT+AGG | + | chr3.1:71287789-71287808 | None:intergenic | 35.0% |
| !! | GCTCTATAAATCTAGGGTTT+TGG | - | chr3.1:71287002-71287021 | MS.gene46262:intron | 35.0% |
| !!! | CTTTTTTTGTCTTCGAATGC+TGG | - | chr3.1:71288546-71288565 | MS.gene46262:intron | 35.0% |
| !!! | GAGCTGATTTTTAGTGCATT+CGG | - | chr3.1:71289700-71289719 | MS.gene46262:intron | 35.0% |
| AAAGTCAGGAAAAGCAGGAA+GGG | + | chr3.1:71289751-71289770 | None:intergenic | 40.0% | |
| AAGAATATCCAAGAAGCTGG+GGG | - | chr3.1:71290061-71290080 | MS.gene46262:intron | 40.0% | |
| AAGGATCTGATTTCTGTGTC+TGG | - | chr3.1:71289251-71289270 | MS.gene46262:intron | 40.0% | |
| ACATCCAACGTTTCCTGAAA+TGG | + | chr3.1:71289601-71289620 | None:intergenic | 40.0% | |
| ACCCTAGATTTATAGAGCTC+AGG | + | chr3.1:71287000-71287019 | None:intergenic | 40.0% | |
| AGACACAGAAATCAGATCCT+TGG | + | chr3.1:71289252-71289271 | None:intergenic | 40.0% | |
| AGGAAGAAAAGAGGGGTTTA+GGG | + | chr3.1:71286845-71286864 | None:intergenic | 40.0% | |
| AGGATCTGATTTCTGTGTCT+GGG | - | chr3.1:71289252-71289271 | MS.gene46262:intron | 40.0% | |
| ATACTTGCAGCTTCTTGATG+TGG | - | chr3.1:71290685-71290704 | MS.gene46262:intron | 40.0% | |
| ATCGCGGTATTAACGTTGTT+CGG | - | chr3.1:71287043-71287062 | MS.gene46262:intron | 40.0% | |
| ATTCATCAGCACCATCAACT+AGG | + | chr3.1:71290667-71290686 | None:intergenic | 40.0% | |
| ATTTCATGCCACCTGCAATT+TGG | - | chr3.1:71287341-71287360 | MS.gene46262:intron | 40.0% | |
| CAAAATTGCTAGTTCCCTAG+TGG | + | chr3.1:71288410-71288429 | None:intergenic | 40.0% | |
| CAAGAATATCCAAGAAGCTG+GGG | - | chr3.1:71290060-71290079 | MS.gene46262:intron | 40.0% | |
| CAATAGCCTCAAACAACTGA+AGG | + | chr3.1:71290007-71290026 | None:intergenic | 40.0% | |
| CCAATAACGATAAGCCAAAC+AGG | + | chr3.1:71289463-71289482 | None:intergenic | 40.0% | |
| CCCTAGATTTATAGAGCTCA+GGG | + | chr3.1:71286999-71287018 | None:intergenic | 40.0% | |
| CCCTGAGCTCTATAAATCTA+GGG | - | chr3.1:71286996-71287015 | MS.gene46262:intron | 40.0% | |
| CTCATGATTTCTTCTGTCAG+TGG | + | chr3.1:71287910-71287929 | None:intergenic | 40.0% | |
| CTTAATGCTAGTGATGATCG+CGG | - | chr3.1:71287027-71287046 | MS.gene46262:intron | 40.0% | |
| CTTCAAGGTGTGCAAAATTC+AGG | - | chr3.1:71287878-71287897 | MS.gene46262:intron | 40.0% | |
| CTTCTTAAAGCATGCAGAAG+TGG | - | chr3.1:71289816-71289835 | MS.gene46262:intron | 40.0% | |
| GAACCTTAGAGCTTATATGG+CGG | - | chr3.1:71287986-71288005 | MS.gene46262:intron | 40.0% | |
| GCAAGAATATCCAAGAAGCT+GGG | - | chr3.1:71290059-71290078 | MS.gene46262:intron | 40.0% | |
| GCATTCTGTAACCAAATTGC+AGG | + | chr3.1:71287355-71287374 | None:intergenic | 40.0% | |
| GCTTTATGTAACATGCCAGA+AGG | - | chr3.1:71290725-71290744 | MS.gene46262:CDS | 40.0% | |
| GGGGTTGCTTATGCTTAAAA+TGG | - | chr3.1:71288745-71288764 | MS.gene46262:intron | 40.0% | |
| GGTTCACACTCAGCTTATAT+GGG | - | chr3.1:71288773-71288792 | MS.gene46262:intron | 40.0% | |
| GTACTCGAACTACTTCTTCT+TGG | + | chr3.1:71286769-71286788 | None:intergenic | 40.0% | |
| GTCTGCAAGCCTAATTAAGT+TGG | - | chr3.1:71290605-71290624 | MS.gene46262:CDS | 40.0% | |
| TAGGAAGAAAAGAGGGGTTT+AGG | + | chr3.1:71286846-71286865 | None:intergenic | 40.0% | |
| TGGATCTTCCATTTCTTCCA+AGG | - | chr3.1:71289232-71289251 | MS.gene46262:CDS | 40.0% | |
| TGGTTCACACTCAGCTTATA+TGG | - | chr3.1:71288772-71288791 | MS.gene46262:intron | 40.0% | |
| TTCTGTAACCAAATTGCAGG+TGG | + | chr3.1:71287352-71287371 | None:intergenic | 40.0% | |
| TTGAAACCAGATTGTTCCAG+CGG | - | chr3.1:71289779-71289798 | MS.gene46262:intron | 40.0% | |
| TTGGACGGCTGAAACAAATT+GGG | + | chr3.1:71286724-71286743 | None:intergenic | 40.0% | |
| TTTCTCAAGGAGATCTTCGT+CGG | - | chr3.1:71288121-71288140 | MS.gene46262:CDS | 40.0% | |
| TTTGGACGGCTGAAACAAAT+TGG | + | chr3.1:71286725-71286744 | None:intergenic | 40.0% | |
| ! | AAAAAAGAATGAGGGCATGC+TGG | + | chr3.1:71288533-71288552 | None:intergenic | 40.0% |
| ! | ACATACATATTGGGCTAGAG+GGG | - | chr3.1:71288726-71288745 | MS.gene46262:intron | 40.0% |
| ! | AGGGGTTTAGGGTTTAGAAA+TGG | + | chr3.1:71286834-71286853 | None:intergenic | 40.0% |
| ! | CCTGTTTGGCTTATCGTTAT+TGG | - | chr3.1:71289460-71289479 | MS.gene46262:CDS | 40.0% |
| ! | GAATCAAAGAGTGTGTGTTG+AGG | + | chr3.1:71286876-71286895 | None:intergenic | 40.0% |
| ! | GTACATACATATTGGGCTAG+AGG | - | chr3.1:71288724-71288743 | MS.gene46262:intron | 40.0% |
| ! | TATGCCATTTCAGGAAACGT+TGG | - | chr3.1:71289594-71289613 | MS.gene46262:intron | 40.0% |
| ! | TATTTTCGAAAGGAAGGAGC+AGG | + | chr3.1:71288883-71288902 | None:intergenic | 40.0% |
| !! | AAGTGAAGGAAAAGGTGTTG+AGG | + | chr3.1:71290136-71290155 | None:intergenic | 40.0% |
| !! | ACTTGTCGCTTTCAAGAGTT+AGG | - | chr3.1:71290520-71290539 | MS.gene46262:intron | 40.0% |
| !!! | CTTGTTTTGCCAGTTTCATC+TGG | - | chr3.1:71289917-71289936 | MS.gene46262:intron | 40.0% |
| AGCAGGAAGGGAGAAAAATG+TGG | + | chr3.1:71289739-71289758 | None:intergenic | 45.0% | |
| AGGAATCTACCTTGATGCTG+AGG | - | chr3.1:71287960-71287979 | MS.gene46262:intron | 45.0% | |
| AGTCTCTCAGATGCTAACTC+AGG | - | chr3.1:71289893-71289912 | MS.gene46262:intron | 45.0% | |
| ATAAAAACAGAACAGGCGGC+AGG | + | chr3.1:71289297-71289316 | None:intergenic | 45.0% | |
| ATCTACCTTGATGCTGAGGT+AGG | - | chr3.1:71287964-71287983 | MS.gene46262:intron | 45.0% | |
| CCACTGCATCAACTTTCCAT+TGG | + | chr3.1:71288586-71288605 | None:intergenic | 45.0% | |
| CGACATATCAGATGAGCAGA+AGG | - | chr3.1:71290037-71290056 | MS.gene46262:intron | 45.0% | |
| CGTTTCCTGAAATGGCATAC+AGG | + | chr3.1:71289593-71289612 | None:intergenic | 45.0% | |
| GAAAGTCAGGAAAAGCAGGA+AGG | + | chr3.1:71289752-71289771 | None:intergenic | 45.0% | |
| GAATTGCAGTGCCTAGTTGA+TGG | - | chr3.1:71290653-71290672 | MS.gene46262:intron | 45.0% | |
| GCCCTGAGCTCTATAAATCT+AGG | - | chr3.1:71286995-71287014 | MS.gene46262:intron | 45.0% | |
| GCTACGTCTTTCACTTGCTT+TGG | + | chr3.1:71286743-71286762 | None:intergenic | 45.0% | |
| GGATCTGATTTCTGTGTCTG+GGG | - | chr3.1:71289253-71289272 | MS.gene46262:intron | 45.0% | |
| GGCAAGAATATCCAAGAAGC+TGG | - | chr3.1:71290058-71290077 | MS.gene46262:intron | 45.0% | |
| GGTTACAGAATGCACTAAGG+CGG | - | chr3.1:71287362-71287381 | MS.gene46262:intron | 45.0% | |
| TCGGGCTATAACATACTTGC+AGG | - | chr3.1:71288140-71288159 | MS.gene46262:intron | 45.0% | |
| TGAGTTAGCATCTGAGAGAC+TGG | + | chr3.1:71289894-71289913 | None:intergenic | 45.0% | |
| TGGACGGCTGAAACAAATTG+GGG | + | chr3.1:71286723-71286742 | None:intergenic | 45.0% | |
| TTCAATGACAGAAGATGCCC+AGG | - | chr3.1:71287269-71287288 | MS.gene46262:CDS | 45.0% | |
| TTCTCAAGGAGATCTTCGTC+GGG | - | chr3.1:71288122-71288141 | MS.gene46262:CDS | 45.0% | |
| TTTGCACACCTTGAAGCAAG+TGG | + | chr3.1:71287874-71287893 | None:intergenic | 45.0% | |
| ! | AGTAGTGGTTTTTCCAGTGC+CGG | + | chr3.1:71286947-71286966 | None:intergenic | 45.0% |
| ! | CATTCAGAGCACTCAACCAT+GGG | - | chr3.1:71286606-71286625 | MS.gene46262:CDS | 45.0% |
| ! | CCAGAAGGATTTGCTTACGA+GGG | - | chr3.1:71290740-71290759 | MS.gene46262:CDS | 45.0% |
| ! | CGTCTTTCACTTGCTTTGGA+CGG | + | chr3.1:71286739-71286758 | None:intergenic | 45.0% |
| ! | GAAGGTGTGAGTTACCTGTT+TGG | - | chr3.1:71289446-71289465 | MS.gene46262:CDS | 45.0% |
| ! | GACCATAGAAGAGCATGTGT+GGG | + | chr3.1:71286921-71286940 | None:intergenic | 45.0% |
| ! | GGTTACTATTTCTCGACCCA+TGG | + | chr3.1:71286625-71286644 | None:intergenic | 45.0% |
| ! | GGTTGAGTGCTCTGAATGAT+TGG | + | chr3.1:71286604-71286623 | None:intergenic | 45.0% |
| ! | TCATTCAGAGCACTCAACCA+TGG | - | chr3.1:71286605-71286624 | MS.gene46262:CDS | 45.0% |
| !! | CCAATGGAAAGTTGATGCAG+TGG | - | chr3.1:71288583-71288602 | MS.gene46262:intron | 45.0% |
| !!! | GGCGGCTGTGCTATTTTTAA+TGG | - | chr3.1:71288004-71288023 | MS.gene46262:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAAATC+CGG | - | chr3.1:71288484-71288503 | MS.gene46262:intron | 5.0% |
| AAACCAGATTGTTCCAGCGG+AGG | - | chr3.1:71289782-71289801 | MS.gene46262:intron | 50.0% | |
| ACTTACGCTTCCGGTTTCGA+GGG | + | chr3.1:71286801-71286820 | None:intergenic | 50.0% | |
| AGGTTCCTACCTCAGCATCA+AGG | + | chr3.1:71287972-71287991 | None:intergenic | 50.0% | |
| ATGCTCTTCTATGGTCCTCC+CGG | - | chr3.1:71286925-71286944 | MS.gene46262:intron | 50.0% | |
| CAGCCGCCATATAAGCTCTA+AGG | + | chr3.1:71287992-71288011 | None:intergenic | 50.0% | |
| CCATATGCGCAGACAAGTGA+AGG | + | chr3.1:71290150-71290169 | None:intergenic | 50.0% | |
| CCCTCGTAAGCAAATCCTTC+TGG | + | chr3.1:71290743-71290762 | None:intergenic | 50.0% | |
| CCTTCACTTGTCTGCGCATA+TGG | - | chr3.1:71290147-71290166 | MS.gene46262:intron | 50.0% | |
| GCGCAGACAAGTGAAGGAAA+AGG | + | chr3.1:71290144-71290163 | None:intergenic | 50.0% | |
| TACTTACGCTTCCGGTTTCG+AGG | + | chr3.1:71286802-71286821 | None:intergenic | 50.0% | |
| TGCCCACACATGCTCTTCTA+TGG | - | chr3.1:71286916-71286935 | MS.gene46262:intron | 50.0% | |
| ! | AAAGCTGATGGGCGATAGCA+AGG | + | chr3.1:71286972-71286991 | None:intergenic | 50.0% |
| ! | AAGCTGATGGGCGATAGCAA+GGG | + | chr3.1:71286971-71286990 | None:intergenic | 50.0% |
| ! | CTGATTTCTGTGTCTGGGGT+AGG | - | chr3.1:71289257-71289276 | MS.gene46262:intron | 50.0% |
| ! | GCCAGAAGGATTTGCTTACG+AGG | - | chr3.1:71290739-71290758 | MS.gene46262:CDS | 50.0% |
| ! | GCTATCGCCCATCAGCTTTT+CGG | - | chr3.1:71286973-71286992 | MS.gene46262:intron | 50.0% |
| ! | GGACCATAGAAGAGCATGTG+TGG | + | chr3.1:71286922-71286941 | None:intergenic | 50.0% |
| ! | GTAGTGGTTTTTCCAGTGCC+GGG | + | chr3.1:71286946-71286965 | None:intergenic | 50.0% |
| ! | TGCAGCCTGTATGCCATTTC+AGG | - | chr3.1:71289585-71289604 | MS.gene46262:intron | 50.0% |
| ATCTGCTTCCCCCAGCTTCT+TGG | + | chr3.1:71290072-71290091 | None:intergenic | 55.0% | |
| CAACCTCCGCTGGAACAATC+TGG | + | chr3.1:71289788-71289807 | None:intergenic | 55.0% | |
| CAGTCTGCGGCTCGCTTATT+TGG | - | chr3.1:71289212-71289231 | MS.gene46262:CDS | 55.0% | |
| CTCACCAACACCCTCGAAAC+CGG | - | chr3.1:71286788-71286807 | MS.gene46262:intron | 55.0% | |
| CTCAGGGCCGAAAAGCTGAT+GGG | + | chr3.1:71286983-71287002 | None:intergenic | 55.0% | |
| GAAGCTGGGGGAAGCAGATA+AGG | - | chr3.1:71290073-71290092 | MS.gene46262:CDS | 55.0% | |
| GAATGCACTAAGGCGGACGA+TGG | - | chr3.1:71287369-71287388 | MS.gene46262:intron | 55.0% | |
| GATTTCGCTGCTGTCGCTGT+CGG | - | chr3.1:71287078-71287097 | MS.gene46262:intron | 55.0% | |
| TGTTCCAGCGGAGGTTGTTG+AGG | - | chr3.1:71289791-71289810 | MS.gene46262:intron | 55.0% | |
| AGTGCCTCAACAACCTCCGC+TGG | + | chr3.1:71289798-71289817 | None:intergenic | 60.0% | |
| GCTCAGGGCCGAAAAGCTGA+TGG | + | chr3.1:71286984-71287003 | None:intergenic | 60.0% | |
| GGCGATAGCAAGGGCAGTAG+TGG | + | chr3.1:71286962-71286981 | None:intergenic | 60.0% | |
| TTCTATGGTCCTCCCGGCAC+TGG | - | chr3.1:71286931-71286950 | MS.gene46262:intron | 60.0% | |
| ! | GCTTCCGGTTTCGAGGGTGT+TGG | + | chr3.1:71286795-71286814 | None:intergenic | 60.0% |
| !! | GTGGTTTTTCCAGTGCCGGG+AGG | + | chr3.1:71286943-71286962 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 71286595 | 71290766 | 71286595 | ID=MS.gene46262 |
| chr3.1 | mRNA | 71286595 | 71290766 | 71286595 | ID=MS.gene46262.t1;Parent=MS.gene46262 |
| chr3.1 | exon | 71290723 | 71290766 | 71290723 | ID=MS.gene46262.t1.exon1;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71290723 | 71290766 | 71290723 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71290547 | 71290625 | 71290547 | ID=MS.gene46262.t1.exon2;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71290547 | 71290625 | 71290547 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71290243 | 71290445 | 71290243 | ID=MS.gene46262.t1.exon3;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71290243 | 71290445 | 71290243 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71290071 | 71290140 | 71290071 | ID=MS.gene46262.t1.exon4;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71290071 | 71290140 | 71290071 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71289918 | 71289991 | 71289918 | ID=MS.gene46262.t1.exon5;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71289918 | 71289991 | 71289918 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71289380 | 71289500 | 71289380 | ID=MS.gene46262.t1.exon6;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71289380 | 71289500 | 71289380 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71289200 | 71289262 | 71289200 | ID=MS.gene46262.t1.exon7;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71289200 | 71289262 | 71289200 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71288087 | 71288146 | 71288087 | ID=MS.gene46262.t1.exon8;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71288087 | 71288146 | 71288087 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71287447 | 71287572 | 71287447 | ID=MS.gene46262.t1.exon9;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71287447 | 71287572 | 71287447 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71287267 | 71287350 | 71287267 | ID=MS.gene46262.t1.exon10;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71287267 | 71287350 | 71287267 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| chr3.1 | exon | 71286595 | 71286699 | 71286595 | ID=MS.gene46262.t1.exon11;Parent=MS.gene46262.t1 |
| chr3.1 | CDS | 71286595 | 71286699 | 71286595 | ID=cds.MS.gene46262.t1;Parent=MS.gene46262.t1 |
| Gene Sequence |
| Protein sequence |
